Sed0016879 (gene) Chayote v1

Overview
NameSed0016879
Typegene
OrganismSechium edule (Chayote v1)
DescriptionMRN complex-interacting protein isoform X1
LocationLG03: 3128738 .. 3130328 (+)
RNA-Seq ExpressionSed0016879
SyntenySed0016879
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAAAGATAGAAGCAAAATCTGTAAAATCAGTGGAGAAATTGAATAAATCGCAAGCAGAAAATGGCGACGATCTTCATCGCCGTCCAGTGCTACCAGTGCTCCACCATGCAGGCACCGATCTCGTTCCGTCTTTTTCCGTTTCTTGTTTTTCTTCTCTGTTAACATCTCTAATGGCGGTGGTTTCGGTTCAGGTAAAGCAGCAGCGGCGGAGCGGGAACAAGTGGAACTGTGCAGTGTGCAACGAGAAGCAATCGGTGCAGAAGGTCTTCGCTCGAGCTTCAATGGCGAAAGACGTCCGTAAGTTCGTACAGAGCTTCAACATGTCTCGGAGATACGCGGATGAACAGACGAAAATCGACGAGCTAGAGGAAGAAATTGTCGACGAAGATCAGATTGAGTGCAGTGCGAAGAAGGAAAGACGCAGCGATTGGAATGAGTACCTCGATCTCGAAGAAGATCGCAGCCAAAGTGGAGGAGAAAACAATCGAGAATTAGGTCACCGATTCTGTAAATACATTTTTACGATTAGTTAATCGATCTCTGTTGGATGATGATTTTCTCTGTAGCAGGGAGTGATTTTTCCGAAGTTAAGATCGTGACGGAGTTTCCAGAAGTAAAGAACAAGAGATCTGGTTCAACGAGCCGTTCAAGCTGGTCCGAAGATGGCGAAGGAGATGGACTTTACAGACCAGTTTTCTCTAAAAGGAAACACATCGCCAAGAATTCGAGCTCCCAAGGTAACATTTGTATATGATCCTAATATTTCTGCACTGTTTCAAAACTAATGTTAGCAAAAAAATGGCTTTAAATTGCAGATGAGATTCGAAACTGGGAGTCTCCATCAGCCATTGATGCATCAAAATGGAGTAATGAAAACATTTCCACGAAGAGGCAACACATCGCCAAGAATTTCAAATCCAGAGGTAAAACGTTGAGATGATCTTCTTAATACTCGTTTCAAAAATTAAAAATATCGAGTCCAAACGGCCATGAATTGCAGATGGGATCCGAAAATGGAAGTCGCCATTAGCCATTGATGCATCAAAATGGAGTAAAGAAGAAGATGGAAATGCAAGAACGAAAACCAGCATTTTAGCAAAGGTAAGAGGACCTTCGAAGTGGAGTGAATACATAACTGAAGAAGAAAACTATGGAGCCGAAAATGGAGCAATTTTGTCAACAGAACAGGGCATAAACATCTTCGAGACAATGCTGAATGATGATAGAGTTGAAGATGATATCCACCCTGATTTCAAATGACAAGCTCATAAAATTCTACCAAACCAACATCGTGGTGAGCCCGAAATGACCGCGATCAAACAATTTTCGCTTAATTTTTGGGATATGCCCTTCCACTTGCATGGAACTGAAACCTCTTATTCACCTTTGTTTTGATATTAAGGAGAAGATAGTGAAGATAAGAGAGGTTTCTGGTATTACAGTATCATACCCTGCATTCAATTTTAGTTTAGCTTTTATAAATAATTTTGAAGCCAACTCCAAATATGAATGAATGTTCATACCCGAAAGTTTCCTGAGAAAAATTATTATGTTAGTAGGCTGAATTTTCCATTTAGCAGTAACATCAC

mRNA sequence

AGAAAAGATAGAAGCAAAATCTGTAAAATCAGTGGAGAAATTGAATAAATCGCAAGCAGAAAATGGCGACGATCTTCATCGCCGTCCAGTGCTACCAGTGCTCCACCATGCAGGTAAAGCAGCAGCGGCGGAGCGGGAACAAGTGGAACTGTGCAGTGTGCAACGAGAAGCAATCGGTGCAGAAGGTCTTCGCTCGAGCTTCAATGGCGAAAGACGTCCGTAAGTTCGTACAGAGCTTCAACATGTCTCGGAGATACGCGGATGAACAGACGAAAATCGACGAGCTAGAGGAAGAAATTGTCGACGAAGATCAGATTGAGTGCAGTGCGAAGAAGGAAAGACGCAGCGATTGGAATGAGTACCTCGATCTCGAAGAAGATCGCAGCCAAAGTGGAGGAGAAAACAATCGAGAATTAGGGAGTGATTTTTCCGAAGTTAAGATCGTGACGGAGTTTCCAGAAGTAAAGAACAAGAGATCTGGTTCAACGAGCCGTTCAAGCTGGTCCGAAGATGGCGAAGGAGATGGACTTTACAGACCAGTTTTCTCTAAAAGGAAACACATCGCCAAGAATTCGAGCTCCCAAGATGAGATTCGAAACTGGGAGTCTCCATCAGCCATTGATGCATCAAAATGGAGTAATGAAAACATTTCCACGAAGAGGCAACACATCGCCAAGAATTTCAAATCCAGAGATGGGATCCGAAAATGGAAGTCGCCATTAGCCATTGATGCATCAAAATGGAGTAAAGAAGAAGATGGAAATGCAAGAACGAAAACCAGCATTTTAGCAAAGGTAAGAGGACCTTCGAAGTGGAGTGAATACATAACTGAAGAAGAAAACTATGGAGCCGAAAATGGAGCAATTTTGTCAACAGAACAGGGCATAAACATCTTCGAGACAATGCTGAATGATGATAGAGTTGAAGATGATATCCACCCTGATTTCAAATGACAAGCTCATAAAATTCTACCAAACCAACATCGTGGTGAGCCCGAAATGACCGCGATCAAACAATTTTCGCTTAATTTTTGGGATATGCCCTTCCACTTGCATGGAACTGAAACCTCTTATTCACCTTTGTTTTGATATTAAGGAGAAGATAGTGAAGATAAGAGAGGTTTCTGGTATTACAGTATCATACCCTGCATTCAATTTTAGTTTAGCTTTTATAAATAATTTTGAAGCCAACTCCAAATATGAATGAATGTTCATACCCGAAAGTTTCCTGAGAAAAATTATTATGTTAGTAGGCTGAATTTTCCATTTAGCAGTAACATCAC

Coding sequence (CDS)

ATGGCGACGATCTTCATCGCCGTCCAGTGCTACCAGTGCTCCACCATGCAGGTAAAGCAGCAGCGGCGGAGCGGGAACAAGTGGAACTGTGCAGTGTGCAACGAGAAGCAATCGGTGCAGAAGGTCTTCGCTCGAGCTTCAATGGCGAAAGACGTCCGTAAGTTCGTACAGAGCTTCAACATGTCTCGGAGATACGCGGATGAACAGACGAAAATCGACGAGCTAGAGGAAGAAATTGTCGACGAAGATCAGATTGAGTGCAGTGCGAAGAAGGAAAGACGCAGCGATTGGAATGAGTACCTCGATCTCGAAGAAGATCGCAGCCAAAGTGGAGGAGAAAACAATCGAGAATTAGGGAGTGATTTTTCCGAAGTTAAGATCGTGACGGAGTTTCCAGAAGTAAAGAACAAGAGATCTGGTTCAACGAGCCGTTCAAGCTGGTCCGAAGATGGCGAAGGAGATGGACTTTACAGACCAGTTTTCTCTAAAAGGAAACACATCGCCAAGAATTCGAGCTCCCAAGATGAGATTCGAAACTGGGAGTCTCCATCAGCCATTGATGCATCAAAATGGAGTAATGAAAACATTTCCACGAAGAGGCAACACATCGCCAAGAATTTCAAATCCAGAGATGGGATCCGAAAATGGAAGTCGCCATTAGCCATTGATGCATCAAAATGGAGTAAAGAAGAAGATGGAAATGCAAGAACGAAAACCAGCATTTTAGCAAAGGTAAGAGGACCTTCGAAGTGGAGTGAATACATAACTGAAGAAGAAAACTATGGAGCCGAAAATGGAGCAATTTTGTCAACAGAACAGGGCATAAACATCTTCGAGACAATGCTGAATGATGATAGAGTTGAAGATGATATCCACCCTGATTTCAAATGA

Protein sequence

MATIFIAVQCYQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARASMAKDVRKFVQSFNMSRRYADEQTKIDELEEEIVDEDQIECSAKKERRSDWNEYLDLEEDRSQSGGENNRELGSDFSEVKIVTEFPEVKNKRSGSTSRSSWSEDGEGDGLYRPVFSKRKHIAKNSSSQDEIRNWESPSAIDASKWSNENISTKRQHIAKNFKSRDGIRKWKSPLAIDASKWSKEEDGNARTKTSILAKVRGPSKWSEYITEEENYGAENGAILSTEQGINIFETMLNDDRVEDDIHPDFK
Homology
BLAST of Sed0016879 vs. NCBI nr
Match: XP_038885326.1 (MRN complex-interacting protein [Benincasa hispida])

HSP 1 Score: 365.5 bits (937), Expect = 4.2e-97
Identity = 199/314 (63.38%), Postives = 246/314 (78.34%), Query Frame = 0

Query: 1   MATIFIAVQCYQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARASMAKDVRKFVQSFN 60
           MATIFIAVQC+QCSTMQVKQQR+SGN+W CAVCNEKQS+QKVFARASMAKDVRKFVQ+FN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNRWICAVCNEKQSLQKVFARASMAKDVRKFVQNFN 60

Query: 61  MSRRYADEQTKIDE-LEEEIVDEDQIECSAKKERRSDWNEYLDLEEDRSQSGGENNRELG 120
           MSR+YADEQ K DE L+  IVDED+++CSA+++RR+DW+EYLD EEDRS +G EN  EL 
Sbjct: 61  MSRKYADEQAKADELLDGGIVDEDKLDCSARRKRRNDWSEYLDPEEDRSHNGRENEGELE 120

Query: 121 SDFSEVKIVTEFPEVKNKRSGSTSRSSWSEDGEGDGLYRPVFSKRKHIAKNSSSQDEIRN 180
           S+ ++ KIVTE PEVK ++SGSTS S WSE GEGDG YRP+FSKRKHIA N SSQDE+RN
Sbjct: 121 SESTDEKIVTEIPEVKTRKSGSTSCSRWSE-GEGDGFYRPIFSKRKHIANNLSSQDEVRN 180

Query: 181 WESPSAIDASKWS---NENISTKRQHIAKNFKSR----------DGIRKWKSPLAIDASK 240
           WES S I   KWS   +E I +K ++++  F+ +          D I+ W+    I+ASK
Sbjct: 181 WESTSTIQTMKWSKGNDEQIISKAKNLSAPFQDKKMSKNSHKIADEIQNWELQSEIEASK 240

Query: 241 WSKE---EDGNARTKTSILAKVRGP-SKWSEYITEEENYGAENGAILSTEQGINIFETML 297
            SK+   +D N+RTKTSILAKVRGP SKWSEYITEE+N    NG  ++T+Q I+I + ++
Sbjct: 241 GSKDMSKDDENSRTKTSILAKVRGPSSKWSEYITEEDNCRGRNGENMATDQCIDILKKII 300

BLAST of Sed0016879 vs. NCBI nr
Match: XP_004141004.1 (MRN complex-interacting protein [Cucumis sativus] >KGN46102.1 hypothetical protein Csa_005258 [Cucumis sativus])

HSP 1 Score: 356.3 bits (913), Expect = 2.6e-94
Identity = 198/311 (63.67%), Postives = 239/311 (76.85%), Query Frame = 0

Query: 1   MATIFIAVQCYQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARASMAKDVRKFVQSFN 60
           MATIFIAVQC+QCSTMQVKQQR+SGNKW CAVCN+KQSVQKVFARA MAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRRYADEQTKIDEL-EEEIVDEDQIECSAKKERRSDWNEYLDLEEDRSQSGGENNRELG 120
           MSR+YA+EQ  +DEL +  IVD+D++ CS +++ RSDW++YLD  EDRS SG EN  EL 
Sbjct: 61  MSRKYANEQANVDELIDGGIVDDDKLVCSGRRKSRSDWSDYLDPVEDRSHSGRENEVELE 120

Query: 121 SDFSEVKIVTEFPEVKNKRSGSTSRSSWSEDGEGDGLYRPVFSKRKHIAKNSSSQDEIRN 180
           SD   +KIVTE P++K  +SGS S SSWSE+GEGDGLYRP+FSKRKHIA N SSQDEIRN
Sbjct: 121 SD---LKIVTELPDIKTWKSGSRSCSSWSEEGEGDGLYRPLFSKRKHIANNLSSQDEIRN 180

Query: 181 WESPSAIDASKWS----NENISTKR--------QHIAKN-FKSRDGIRKWKSPLAIDASK 240
           WESPSAI ASK S     + +ST +        + + KN  K  D I+ W+ P  I+ASK
Sbjct: 181 WESPSAIHASKLSKGDDEQTLSTAKYLSAPFQDKKMGKNGHKVEDEIQNWELPSEIEASK 240

Query: 241 WSKEEDGNARTKTSILAKVRG-PSKWSEYITEEENYGAENGAILSTEQGINIFETMLNDD 297
           WSK +D N RTK+ IL KVRG  SKWSEYITEEEN G  N   ++ E+G+++ + M+N++
Sbjct: 241 WSK-DDENLRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREEGMDVLKMMINEE 300

BLAST of Sed0016879 vs. NCBI nr
Match: XP_008456719.1 (PREDICTED: UPF0544 protein C5orf45 homolog [Cucumis melo] >KAA0031637.1 UPF0544 protein C5orf45-like protein [Cucumis melo var. makuwa] >TYK04473.1 UPF0544 protein C5orf45-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 350.1 bits (897), Expect = 1.8e-92
Identity = 199/311 (63.99%), Postives = 239/311 (76.85%), Query Frame = 0

Query: 1   MATIFIAVQCYQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARASMAKDVRKFVQSFN 60
           MATIFIAVQC+QCSTMQVKQQR+SGNKW CAVCNEKQSVQKVFARA MAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRRYADEQTKIDEL-EEEIVDEDQIECSAKKERRSDWNEYLDLEEDRSQSGGENNRELG 120
           MSR+YA+EQ  +D+L    IVD+D+++CS +++RR+DW+EYLD EEDRS SG EN  EL 
Sbjct: 61  MSRKYANEQANVDDLIHGGIVDDDKLDCSGRRKRRNDWSEYLDPEEDRSHSGRENEGELE 120

Query: 121 SDFSEVKIVTEFPEVKNKRSGSTSRSSWSEDGEGDGLYRPVFSKRKHIAKNSSSQDEIRN 180
           SD   +KI TE P++K  +SGS S SSWSE GEGDGLYRP+FSKRKHIAKN SSQDEI+N
Sbjct: 121 SD---LKIATELPDIKTWKSGSRSCSSWSE-GEGDGLYRPLFSKRKHIAKNLSSQDEIQN 180

Query: 181 WESPSAIDASKWS----NENISTKR--------QHIAKN-FKSRDGIRKWKSPLAIDASK 240
           WESPSAI  SK S     +  ST +        + ++KN  K    I+ W+ P  I+ASK
Sbjct: 181 WESPSAIHTSKLSKGDDEQTFSTAKYLSAPFQDKKMSKNSHKVESEIQNWELPSEIEASK 240

Query: 241 WSKEEDGNARTKTSILAKVRG-PSKWSEYITEEENYGAENGAILSTEQGINIFETMLNDD 297
           W+K +D N+RTK+ IL KVRG  SKWSEYITEEEN G  N   ++ EQG++I + M+ND+
Sbjct: 241 WTK-DDENSRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREQGMDILK-MINDE 300

BLAST of Sed0016879 vs. NCBI nr
Match: XP_023549686.1 (MRN complex-interacting protein isoform X2 [Cucurbita pepo subsp. pepo] >XP_023549687.1 MRN complex-interacting protein isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327.4 bits (838), Expect = 1.3e-85
Identity = 192/307 (62.54%), Postives = 224/307 (72.96%), Query Frame = 0

Query: 1   MATIFIAVQCYQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARASMAKDVRKFVQSFN 60
           M+TIFIAVQC+QCSTMQVKQQRRSGNKW CAVCNEKQSVQKVFARA MAKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRRYADEQTKIDE-LEEEIVDEDQIECSAKKERRSDWNEYLDLEEDRSQSGGENNRELG 120
           MSR+YADEQTK+DE L+EEIVDEDQ++ +AK++RRSDW+EYLDLEEDRSQ+G EN RELG
Sbjct: 61  MSRKYADEQTKVDEILDEEIVDEDQLDFNAKRKRRSDWSEYLDLEEDRSQTGRENERELG 120

Query: 121 SDFSEVKIVTEFPEVKNKRSGSTSRSSWSEDGEGDGLYRPVFSKRKHIAKNSSSQDEIRN 180
           SDF++ KIVTE PE K ++  STS SS  E GEG   YRPVF KR HIAKN         
Sbjct: 121 SDFTDGKIVTELPEEKTRKHCSTSCSSRPEGGEGKRFYRPVFPKRTHIAKN--------- 180

Query: 181 WESPSAIDASKW------SNENISTKRQHIAKNFKSRDGIRKWKSPLAIDASKWSK---E 240
               SAI ASKW       +E +S K      N  S+D IR W+S   I+ASKWSK   +
Sbjct: 181 ----SAIQASKWRKGVREDDEKVSLK-----ANLSSKDEIRNWESQSDIEASKWSKGMSK 240

Query: 241 EDGNARTKTSILAKVRGPS-KWSEYITEEENYGAENGAILSTEQGINIFETMLNDDRVED 297
           +D NA     ILAKV GPS KWSEY+TEE+         + TEQ ++  + ++ND+ VED
Sbjct: 241 DDENA----CILAKVGGPSPKWSEYMTEEDKN-------MGTEQDMDTLKMIINDEIVED 278

BLAST of Sed0016879 vs. NCBI nr
Match: XP_023549685.1 (MRN complex-interacting protein isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 325.9 bits (834), Expect = 3.7e-85
Identity = 197/322 (61.18%), Postives = 229/322 (71.12%), Query Frame = 0

Query: 1   MATIFIAVQCYQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARASMAKDVRKFVQSFN 60
           M+TIFIAVQC+QCSTMQVKQQRRSGNKW CAVCNEKQSVQKVFARA MAKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRRYADEQTKIDE-LEEEIVDEDQIECSAKKERRSDWNEYLDLEEDRSQSGGENNRELG 120
           MSR+YADEQTK+DE L+EEIVDEDQ++ +AK++RRSDW+EYLDLEEDRSQ+G EN RELG
Sbjct: 61  MSRKYADEQTKVDEILDEEIVDEDQLDFNAKRKRRSDWSEYLDLEEDRSQTGRENERELG 120

Query: 121 SDFSEVKIVTEFPEVKNKRSGSTSRSSWSEDGEGDGLYRPVFSKRKHIAKNSSSQDEIRN 180
           SDF++ KIVTE PE K ++  STS SS  E GEG   YRPVF KR HIAKN         
Sbjct: 121 SDFTDGKIVTELPEEKTRKHCSTSCSSRPEGGEGKRFYRPVFPKRTHIAKN--------- 180

Query: 181 WESPSAIDASKW------SNENISTKRQHIAKNFKSRDGIRKWKSPLAIDASKWSK---E 240
               SAI ASKW       +E +S K      N  S+D IR W+S   I+ASKWSK   +
Sbjct: 181 ----SAIQASKWRKGVREDDEKVSLK-----ANLSSKDEIRNWESQSDIEASKWSKGMSK 240

Query: 241 EDGNARTKTSILAKVRGPS-KWSEYITEEE-NYGAE----------NGAI----LSTEQG 297
           +D NA     ILAKV GPS KWSEY+TEE+ N G E          N  I    + TEQ 
Sbjct: 241 DDENA----CILAKVGGPSPKWSEYMTEEDKNMGTEQDMDTLKMIINDEIVEDDMGTEQD 300

BLAST of Sed0016879 vs. ExPASy Swiss-Prot
Match: Q32PP1 (MRN complex-interacting protein OS=Danio rerio OX=7955 GN=mrnip PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.0e-04
Identity = 61/212 (28.77%), Postives = 89/212 (41.98%), Query Frame = 0

Query: 1   MATIFIAVQCYQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARASMAKDVRKFVQSFN 60
           M   F  ++C+ C T QV QQ +   KW C VC EKQS+ K F R + A D R+ VQ  N
Sbjct: 1   MVQEFNVLRCFSCQTFQV-QQVKKAKKWTCKVCGEKQSLIKEFGRGA-AADCRRHVQKLN 60

Query: 61  MSR---RYADEQTKIDELEEEIVDEDQIECSAKKERR-----SDWNEYLDLEEDRSQSGG 120
             R      + Q  + + +EE  +ED  E    K  +     S W++Y D      Q+  
Sbjct: 61  ALRGEQHQLNTQQLLAQGDEENENEDVYEVLDPKSEQEEAHVSRWSKYTD------QTTE 120

Query: 121 ENNRELGSDFSEVKIVTEFPEV------KNKRSGST-----SRSSWSEDGEGDGLYRPVF 180
             N E   +  +  + TE P+       K K+  S      +  ++ E   G   +R   
Sbjct: 121 GPNEEKDDEDEDENVYTERPQFRIQGTRKRKKMSSLEPFGGNCDNYEESRAGYSQFRKQA 180

Query: 181 SKRKHIAKNSSSQDEIRNWESPSAIDASKWSN 194
                + K SSS     +W   S    SK+SN
Sbjct: 181 YLPLQLEKRSSS-----SWNKGS---VSKYSN 196

BLAST of Sed0016879 vs. ExPASy TrEMBL
Match: A0A0A0KCJ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052770 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 1.2e-94
Identity = 198/311 (63.67%), Postives = 239/311 (76.85%), Query Frame = 0

Query: 1   MATIFIAVQCYQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARASMAKDVRKFVQSFN 60
           MATIFIAVQC+QCSTMQVKQQR+SGNKW CAVCN+KQSVQKVFARA MAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRRYADEQTKIDEL-EEEIVDEDQIECSAKKERRSDWNEYLDLEEDRSQSGGENNRELG 120
           MSR+YA+EQ  +DEL +  IVD+D++ CS +++ RSDW++YLD  EDRS SG EN  EL 
Sbjct: 61  MSRKYANEQANVDELIDGGIVDDDKLVCSGRRKSRSDWSDYLDPVEDRSHSGRENEVELE 120

Query: 121 SDFSEVKIVTEFPEVKNKRSGSTSRSSWSEDGEGDGLYRPVFSKRKHIAKNSSSQDEIRN 180
           SD   +KIVTE P++K  +SGS S SSWSE+GEGDGLYRP+FSKRKHIA N SSQDEIRN
Sbjct: 121 SD---LKIVTELPDIKTWKSGSRSCSSWSEEGEGDGLYRPLFSKRKHIANNLSSQDEIRN 180

Query: 181 WESPSAIDASKWS----NENISTKR--------QHIAKN-FKSRDGIRKWKSPLAIDASK 240
           WESPSAI ASK S     + +ST +        + + KN  K  D I+ W+ P  I+ASK
Sbjct: 181 WESPSAIHASKLSKGDDEQTLSTAKYLSAPFQDKKMGKNGHKVEDEIQNWELPSEIEASK 240

Query: 241 WSKEEDGNARTKTSILAKVRG-PSKWSEYITEEENYGAENGAILSTEQGINIFETMLNDD 297
           WSK +D N RTK+ IL KVRG  SKWSEYITEEEN G  N   ++ E+G+++ + M+N++
Sbjct: 241 WSK-DDENLRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREEGMDVLKMMINEE 300

BLAST of Sed0016879 vs. ExPASy TrEMBL
Match: A0A5D3BXL1 (UPF0544 protein C5orf45-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00830 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 8.9e-93
Identity = 199/311 (63.99%), Postives = 239/311 (76.85%), Query Frame = 0

Query: 1   MATIFIAVQCYQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARASMAKDVRKFVQSFN 60
           MATIFIAVQC+QCSTMQVKQQR+SGNKW CAVCNEKQSVQKVFARA MAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRRYADEQTKIDEL-EEEIVDEDQIECSAKKERRSDWNEYLDLEEDRSQSGGENNRELG 120
           MSR+YA+EQ  +D+L    IVD+D+++CS +++RR+DW+EYLD EEDRS SG EN  EL 
Sbjct: 61  MSRKYANEQANVDDLIHGGIVDDDKLDCSGRRKRRNDWSEYLDPEEDRSHSGRENEGELE 120

Query: 121 SDFSEVKIVTEFPEVKNKRSGSTSRSSWSEDGEGDGLYRPVFSKRKHIAKNSSSQDEIRN 180
           SD   +KI TE P++K  +SGS S SSWSE GEGDGLYRP+FSKRKHIAKN SSQDEI+N
Sbjct: 121 SD---LKIATELPDIKTWKSGSRSCSSWSE-GEGDGLYRPLFSKRKHIAKNLSSQDEIQN 180

Query: 181 WESPSAIDASKWS----NENISTKR--------QHIAKN-FKSRDGIRKWKSPLAIDASK 240
           WESPSAI  SK S     +  ST +        + ++KN  K    I+ W+ P  I+ASK
Sbjct: 181 WESPSAIHTSKLSKGDDEQTFSTAKYLSAPFQDKKMSKNSHKVESEIQNWELPSEIEASK 240

Query: 241 WSKEEDGNARTKTSILAKVRG-PSKWSEYITEEENYGAENGAILSTEQGINIFETMLNDD 297
           W+K +D N+RTK+ IL KVRG  SKWSEYITEEEN G  N   ++ EQG++I + M+ND+
Sbjct: 241 WTK-DDENSRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREQGMDILK-MINDE 300

BLAST of Sed0016879 vs. ExPASy TrEMBL
Match: A0A1S3C3H7 (UPF0544 protein C5orf45 homolog OS=Cucumis melo OX=3656 GN=LOC103496578 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 8.9e-93
Identity = 199/311 (63.99%), Postives = 239/311 (76.85%), Query Frame = 0

Query: 1   MATIFIAVQCYQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARASMAKDVRKFVQSFN 60
           MATIFIAVQC+QCSTMQVKQQR+SGNKW CAVCNEKQSVQKVFARA MAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRRYADEQTKIDEL-EEEIVDEDQIECSAKKERRSDWNEYLDLEEDRSQSGGENNRELG 120
           MSR+YA+EQ  +D+L    IVD+D+++CS +++RR+DW+EYLD EEDRS SG EN  EL 
Sbjct: 61  MSRKYANEQANVDDLIHGGIVDDDKLDCSGRRKRRNDWSEYLDPEEDRSHSGRENEGELE 120

Query: 121 SDFSEVKIVTEFPEVKNKRSGSTSRSSWSEDGEGDGLYRPVFSKRKHIAKNSSSQDEIRN 180
           SD   +KI TE P++K  +SGS S SSWSE GEGDGLYRP+FSKRKHIAKN SSQDEI+N
Sbjct: 121 SD---LKIATELPDIKTWKSGSRSCSSWSE-GEGDGLYRPLFSKRKHIAKNLSSQDEIQN 180

Query: 181 WESPSAIDASKWS----NENISTKR--------QHIAKN-FKSRDGIRKWKSPLAIDASK 240
           WESPSAI  SK S     +  ST +        + ++KN  K    I+ W+ P  I+ASK
Sbjct: 181 WESPSAIHTSKLSKGDDEQTFSTAKYLSAPFQDKKMSKNSHKVESEIQNWELPSEIEASK 240

Query: 241 WSKEEDGNARTKTSILAKVRG-PSKWSEYITEEENYGAENGAILSTEQGINIFETMLNDD 297
           W+K +D N+RTK+ IL KVRG  SKWSEYITEEEN G  N   ++ EQG++I + M+ND+
Sbjct: 241 WTK-DDENSRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREQGMDILK-MINDE 300

BLAST of Sed0016879 vs. ExPASy TrEMBL
Match: A0A6J1JWE4 (MRN complex-interacting protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488952 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 6.8e-85
Identity = 184/303 (60.73%), Postives = 220/303 (72.61%), Query Frame = 0

Query: 1   MATIFIAVQCYQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARASMAKDVRKFVQSFN 60
           M+TIFIAVQC+QCSTMQVKQQRRSGNKW CAVCNEKQSVQKVFARA MAKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRRYADEQTKIDEL-EEEIVDEDQIECSAKKERRSDWNEYLDLEEDRSQSGGENNRELG 120
           MSR+YADEQTK+DE+ +EEIVDEDQ++ + K++RRSDW+EYLDLEEDRSQ+G EN RELG
Sbjct: 61  MSRKYADEQTKVDEIFDEEIVDEDQLDFNEKRKRRSDWSEYLDLEEDRSQTGRENERELG 120

Query: 121 SDFSEVKIVTEFPEVKNKRSGSTSRSSWSEDGEGDGLYRPVFSKRKHIAKNSSSQDEIRN 180
           SDF++ KIVTE PE K ++  STS S+  E GEG   YRPVF KR HIAKN         
Sbjct: 121 SDFADGKIVTELPEEKTRKHCSTSCSNRPESGEGKIFYRPVFPKRTHIAKN--------- 180

Query: 181 WESPSAIDASKWS------NENISTKRQHIAKNFKSRDGIRKWKSPLAIDASKWSKEEDG 240
               SAI ASKWS      +E +S K +H   +  S+D IR W+S         S ++D 
Sbjct: 181 ----SAIQASKWSKGVREDDEKVSLKAKH---HLSSKDEIRNWES--------LSTKDDE 240

Query: 241 NARTKTSILAKVRGPSKWSEYITEEENYGAENGAILSTEQGINIFETMLNDDRVEDDIHP 297
           NA       +KV GPSKWSEYITE++N G   G  + TEQ ++  + ++ND+ VEDDIHP
Sbjct: 241 NA------CSKVGGPSKWSEYITEDDNCGGRKGENMGTEQDMDTLKMIINDEIVEDDIHP 273

BLAST of Sed0016879 vs. ExPASy TrEMBL
Match: A0A6J1FH51 (MRN complex-interacting protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445345 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 1.2e-84
Identity = 187/304 (61.51%), Postives = 220/304 (72.37%), Query Frame = 0

Query: 1   MATIFIAVQCYQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARASMAKDVRKFVQSFN 60
           M+TIFIAVQC+QCSTMQVKQQRRSGNKW CAVCNEKQSVQKVFARA MAKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRRYADEQTKIDE-LEEEIVDEDQIECSAKKERRSDWNEYLDLEEDRSQSGGENNRELG 120
           MSR+YADEQTK+DE L+EEIVDEDQ++ +AK++RRSDW+EYLDLEEDRSQ+G EN RELG
Sbjct: 61  MSRKYADEQTKVDEILDEEIVDEDQLDFNAKRKRRSDWSEYLDLEEDRSQTGRENERELG 120

Query: 121 SDFSEVKIVTEFPEVKNKRSGSTSRSSWSEDGEGDGLYRPVFSKRKHIAKNSSSQDEIRN 180
           SDF++ K VTE PE K ++  STS SS  E  EG   YRPVF KR HIAKN         
Sbjct: 121 SDFADGKFVTELPEEKTRKHCSTSCSSRPEGVEGKRFYRPVFPKRTHIAKN--------- 180

Query: 181 WESPSAIDASKW------SNENISTKRQHIAKNFKSRDGIRKWKSPLAIDASKWSKEEDG 240
               SAI ASKW       +E +S K +H   +  S+D IR W+SP        S ++D 
Sbjct: 181 ----SAIQASKWRKGVREDDEKVSLKAKH---HLSSKDEIRNWESP--------SSKDDE 240

Query: 241 NARTKTSILAKVRGP-SKWSEYITEEENYGAENGAILSTEQGINIFETMLNDDRVEDDIH 297
           +A     ILAKV GP SKWSEYITE++N G   G  + TEQ ++  + + ND+ VEDDIH
Sbjct: 241 SA----CILAKVGGPSSKWSEYITEDDNCGGRKGENMGTEQDMDTLKMITNDEIVEDDIH 276

BLAST of Sed0016879 vs. TAIR 10
Match: AT1G71760.1 (unknown protein; Has 92 Blast hits to 92 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). )

HSP 1 Score: 131.7 bits (330), Expect = 9.5e-31
Identity = 92/234 (39.32%), Postives = 133/234 (56.84%), Query Frame = 0

Query: 2   ATIFIAVQCYQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARASMAKDVRKFVQSFNM 61
           +T+FIA+QCY+CSTMQVKQ+++S NKW C +CN+KQSV+KVFA+   AK++R FVQSFNM
Sbjct: 3   STLFIALQCYECSTMQVKQKKKSSNKWVCVICNQKQSVKKVFAQGYKAKELRFFVQSFNM 62

Query: 62  SRRYADEQTKI--DELEEEIVDEDQIECSAKKERRSDWNEYLDLEEDRSQSGGENNRELG 121
           SR+ ADE+     D   E  V+ +  E     ++RSDW++YLD +         + R L 
Sbjct: 63  SRKVADEEAHAVGDSFPEVYVEGEVNEEVNGTKKRSDWSQYLDFD------SVNDRRRLA 122

Query: 122 SDFSEVKIVTEFPEVKNKR--------SGSTSRSSWSEDGEGDGLYRPVFSKRKHIAKNS 181
            +  +VKIVTE P    KR        +G +S ++  E+ + + +++P FS+R  I K  
Sbjct: 123 GEEDDVKIVTEMPSNMFKRPKLNKESNAGGSSSNTGGENKDSNEIFKPSFSRRS-IKKPD 182

Query: 182 SSQDEI---------RNWESPSAI-DASKWSNENISTKRQHIAKNFKSRDGIRK 216
              DE+         RN ES      ASKW    I  + +H A     R G++K
Sbjct: 183 FRSDEVVTRKKDMEERNLESERVTKPASKWDAYLIDDEGEHQA---PPRFGVKK 226

BLAST of Sed0016879 vs. TAIR 10
Match: AT1G71760.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 84 Blast hits to 84 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 128.3 bits (321), Expect = 1.1e-29
Identity = 97/310 (31.29%), Postives = 161/310 (51.94%), Query Frame = 0

Query: 2   ATIFIAVQCYQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARASMAKDVRKFVQSFNM 61
           +T+FIA+QCY+CSTMQVKQ+++S NKW C +CN+KQSV+KVFA+   AK++R FVQSFNM
Sbjct: 3   STLFIALQCYECSTMQVKQKKKSSNKWVCVICNQKQSVKKVFAQGYKAKELRFFVQSFNM 62

Query: 62  SRRYADEQTKI--DELEEEIVDEDQIECSAKKERRSDWNEYLDLEEDRSQSGGENNRELG 121
           SR+ ADE+     D   E  V+ +  E     ++RSDW++YLD +         + R L 
Sbjct: 63  SRKVADEEAHAVGDSFPEVYVEGEVNEEVNGTKKRSDWSQYLDFD------SVNDRRRLA 122

Query: 122 SDFSEVKIVTEFPEVKNKR--------SGSTSRSSWSEDGEGDGLYRPVFSKRKHIAKNS 181
            +  +VKIVTE P    KR        +G +S ++  E+ + + +++P FS+R      S
Sbjct: 123 GEEDDVKIVTEMPSNMFKRPKLNKESNAGGSSSNTGGENKDSNEIFKPSFSRR------S 182

Query: 182 SSQDEIRNWESPSAI---DASKWSNENISTKRQHIAKNFKSRDGIRKWKSPLAIDASKWS 241
             + + R+ +  SA      S +S+  + T+++ + +     + + K        ASKW 
Sbjct: 183 IKKPDFRSGKRSSATYVGHISAFSSNEVVTRKKDMEERNLESERVTK-------PASKWD 242

Query: 242 K---EEDGNARTKTSILAKVRGPSKWSEYITEEENYGAENGAILSTEQGINIFETMLNDD 296
               +++G  +           P    +   +++  G  + A++       I        
Sbjct: 243 AYLIDDEGEHQAP---------PRFGVKKALKDDEVGGWDRAVMEINTEYQI-------- 275

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038885326.14.2e-9763.38MRN complex-interacting protein [Benincasa hispida][more]
XP_004141004.12.6e-9463.67MRN complex-interacting protein [Cucumis sativus] >KGN46102.1 hypothetical prote... [more]
XP_008456719.11.8e-9263.99PREDICTED: UPF0544 protein C5orf45 homolog [Cucumis melo] >KAA0031637.1 UPF0544 ... [more]
XP_023549686.11.3e-8562.54MRN complex-interacting protein isoform X2 [Cucurbita pepo subsp. pepo] >XP_0235... [more]
XP_023549685.13.7e-8561.18MRN complex-interacting protein isoform X1 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q32PP12.0e-0428.77MRN complex-interacting protein OS=Danio rerio OX=7955 GN=mrnip PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KCJ31.2e-9463.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052770 PE=4 SV=1[more]
A0A5D3BXL18.9e-9363.99UPF0544 protein C5orf45-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3C3H78.9e-9363.99UPF0544 protein C5orf45 homolog OS=Cucumis melo OX=3656 GN=LOC103496578 PE=4 SV=... [more]
A0A6J1JWE46.8e-8560.73MRN complex-interacting protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1FH511.2e-8461.51MRN complex-interacting protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
Match NameE-valueIdentityDescription
AT1G71760.19.5e-3139.32unknown protein; Has 92 Blast hits to 92 proteins in 41 species: Archae - 0; Bac... [more]
AT1G71760.21.1e-2931.29unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 58..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..152
IPR032739MRN complex-interacting proteinPFAMPF15749MRNIPcoord: 8..148
e-value: 1.8E-20
score: 73.6
IPR032739MRN complex-interacting proteinPANTHERPTHR15863MRN COMPLEX-INTERACTING PROTEINcoord: 1..295

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0016879.1Sed0016879.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007095 mitotic G2 DNA damage checkpoint signaling
cellular_component GO:0005634 nucleus
molecular_function GO:0003682 chromatin binding