Sed0016868 (gene) Chayote v1

Overview


Name	Sed0016868
Type	gene
Organism	Sechium edule (Chayote v1)
Description	60S ribosomal protein L22-2
Location	LG09: 36629532 .. 36631847 (+)
RNA-Seq Expression	Sed0016868
Synteny	Sed0016868

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAATGGATTATTTTCGTAAAAAACCGCAATCTCCTTCAGGCTTTAAATAAAAAACTCAAAACCCTAAAAACCAGCGCCATTGTACAAAATTAGGGCAAACTAGTTGCAGAGCAGCCGGAAAAATGAGCCGTGGATCAGCAGCTTCCGGCGGGCAGAAGGGGAAGAAGAAGGGAGTGAGCTTCGTGATCGACTGCGCGAAGCCAGTCGAGGACAAGATCATGGACATCGCCTCGTTGGAGAAGTTTCTTCTCGAGAGGATCAAGGTCGGCGGCAAAGCCGGCGCACTCGGCGACGCCGTTTCCGTCACTCGGGAGAAGAACAAGATCACCGTCAACTCCGATAGCAACTTCTCCAAGAGGTACTTAATTGTTTTTGTAGTTTTTGAGTATTGTGTTGTTTTGGATTTGTGACGATGAATTCGGTTCGGAATTAGATTTGTTTGGAAATTTTCATTGGATCCGTTTTACTAGCTCCAGAGGTATTAATAAGAATTCAAGCGTTGTGCGTGTTGTTCTTTGTGTTCTGTGATTGGATTTGTGACTATGAATTCGGTTTGAATGAGATTTGCTTGGAAATTAGCCTTGGATCCGCGAATACAAGGGTTGTGTGGGTTGTTCTTTGTTTTCTGTGATTTCTTGGGATTTTGTTATCATATTCTGTTGGATTCTGGTTTTGATGTATTCTGTGATCTCGATATTTCAGCCACGTTTTGTGTAAACAGGGTAGTTAATTCTTCAACAATTAGTCGTTATCTCGTAATAGATTTTCCCTATGAAGCATGGACTCAGACATGAGACACACGGACACCGTGATATACACCAATCTCTAAAAAATTAGGACATGGATAGGCTGATTTAAAATAAACTATGGACACCGATGCCCCCAAAGGATGGTGCAGTGGTTGAAGACTTGGACTTTGAGGGTATGCTCTTCTCATGCTTCTGGGTTCAAAACTCACTTGTGACACTACTCTTTCAATGTCTCCGGTGTCCATCTTATGGATGGGCGTGGTTGCCCTTGTTGTAAAAAAAAAAACTAGGACACTGATAGGTTGATGATACATTAATATTTTTTTTTTAGTAAACATGTAATTTAGTATAGCATACTATGTGGGAGGTGAAGACGAATTTTTTTTAATGGAGAGGGAAAGAATTTTTTTTTGCCATTTCCGTTTCCCATTTCTTTAAATTATTGAGTTAATTATAACCTTAATTATTTTGAGTTTGGACCCTACATTTAGTCTCAAAGATCACACATGTGTCCAAGGTGTGTCCCATTTTTTTTTATAATAATGAAAGGACAAATTAAATGGTGTGTTAGACATCTGTCCGACACAAATTCTTCCACTATTTTGACGTGTTCGTGCTTCATAGGTTTTTCCTCATCGTGCCATTGATTCTGAATTTTTGATTTCTCGTGTATTTTGATATATGGTCATTTTATTTCATCGTTTGTGATGCTTTTAAATATGTAGGCTTTGGAGGTTTTTTTCTGTTGGGTGTATTAGAACTAGGTTACTTCAAGCATCCATTCTCCTATTCTCCTTTTCTTTTCTGTTCTATGCTCAACTTAGAGTGTTATATGTGTCTGATAGGGATGGGCATTTAGAGGAATTAGAATTGATATAGGGACTTTTGGATAACTAGTTAGGGAGTTTGTTATAATATTTTATTATAAATAGAGAGGGTTGGGTAGTGTTTTAGTATCCAAATATTGAGTGAAATCATCGTGGTTTTAAGAGAATTGTTCTCTAGAGAATGGGAGATTCCATGTCTTATCAAAACTTCATCTTGTAGTTTCTTGGTTATTTGATAACAATGAAGATCTTGGATCTTATCAGTGTACATTTTGAAAGAAAGATGATCATTGTTCTTCAGTTATCATTGTTTTTGTTGGAAACTAGCTCTTTAAACTTCTATTAAAACTTTGGAATTGTTCTCCCTTTTGAACCTCAGGTATCTCAAGTACTTGACTAAGAAGTATTTGAAGAAACACAATGTTAGAGATTGGCTTCGGGTTATTGCTTCGAACAAAGACCGCAACGTCTATGAATTAAGGTACTTCAACATAGCCGAGAACGAGGGCGAGGAAGAGGATTGAGGAGGCATGGTTTGCAGTAGAAATATTCCCATATTGAGGTTGTTGAAATTATATTTCCTTATCTAGTGTTGAAGCTTTCCATATATATATTAGCAAGGATTCTTTGAATTATGAGATAATGCAACTATGGTTTACTTCCGAAGATTTAATATCTATAAATTTTGTTCACGTAGTCCTTTTTTGGTTGGTTTGAAGATATTTTCCTTTCTCCGAG

mRNA sequence

TAAAATGGATTATTTTCGTAAAAAACCGCAATCTCCTTCAGGCTTTAAATAAAAAACTCAAAACCCTAAAAACCAGCGCCATTGTACAAAATTAGGGCAAACTAGTTGCAGAGCAGCCGGAAAAATGAGCCGTGGATCAGCAGCTTCCGGCGGGCAGAAGGGGAAGAAGAAGGGAGTGAGCTTCGTGATCGACTGCGCGAAGCCAGTCGAGGACAAGATCATGGACATCGCCTCGTTGGAGAAGTTTCTTCTCGAGAGGATCAAGGTCGGCGGCAAAGCCGGCGCACTCGGCGACGCCGTTTCCGTCACTCGGGAGAAGAACAAGATCACCGTCAACTCCGATAGCAACTTCTCCAAGAGGTATCTCAAGTACTTGACTAAGAAGTATTTGAAGAAACACAATGTTAGAGATTGGCTTCGGGTTATTGCTTCGAACAAAGACCGCAACGTCTATGAATTAAGGTACTTCAACATAGCCGAGAACGAGGGCGAGGAAGAGGATTGAGGAGGCATGGTTTGCAGTAGAAATATTCCCATATTGAGGTTGTTGAAATTATATTTCCTTATCTAGTGTTGAAGCTTTCCATATATATATTAGCAAGGATTCTTTGAATTATGAGATAATGCAACTATGGTTTACTTCCGAAGATTTAATATCTATAAATTTTGTTCACGTAGTCCTTTTTTGGTTGGTTTGAAGATATTTTCCTTTCTCCGAG

Coding sequence (CDS)

ATGAGCCGTGGATCAGCAGCTTCCGGCGGGCAGAAGGGGAAGAAGAAGGGAGTGAGCTTCGTGATCGACTGCGCGAAGCCAGTCGAGGACAAGATCATGGACATCGCCTCGTTGGAGAAGTTTCTTCTCGAGAGGATCAAGGTCGGCGGCAAAGCCGGCGCACTCGGCGACGCCGTTTCCGTCACTCGGGAGAAGAACAAGATCACCGTCAACTCCGATAGCAACTTCTCCAAGAGGTATCTCAAGTACTTGACTAAGAAGTATTTGAAGAAACACAATGTTAGAGATTGGCTTCGGGTTATTGCTTCGAACAAAGACCGCAACGTCTATGAATTAAGGTACTTCAACATAGCCGAGAACGAGGGCGAGGAAGAGGATTGA

Protein sequence

MSRGSAASGGQKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED

Homology

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BLAST of Sed0016868 vs. NCBI nr
Match: XP_023548993.1 (60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo] >KAG6575823.1 60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 236.1 bits (601), Expect = 1.6e-58
Identity = 121/126 (96.03%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MSRGSAASGGQKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           MSRG+AASGG KGKKKGV+FVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAV+
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVT 60

Query: 61  VTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTR+KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of Sed0016868 vs. NCBI nr
Match: XP_022991268.1 (60S ribosomal protein L22-2-like [Cucurbita maxima])

HSP 1 Score: 235.0 bits (598), Expect = 3.7e-58
Identity = 120/126 (95.24%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MSRGSAASGGQKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           MSRG+AASGG KGKKKGV+FVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAV+
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVT 60

Query: 61  VTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTR+KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYEL+YFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELKYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 126

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BLAST of Sed0016868 vs. NCBI nr
Match: XP_004136027.1 (60S ribosomal protein L22-2 [Cucumis sativus] >XP_008451565.1 PREDICTED: 60S ribosomal protein L22-2 [Cucumis melo] >XP_022155135.1 60S ribosomal protein L22-2 [Momordica charantia] >XP_038896853.1 60S ribosomal protein L22-2-like [Benincasa hispida] >KAA0067992.1 60S ribosomal protein L22-2-like [Cucumis melo var. makuwa] >KGN44943.1 hypothetical protein Csa_015937 [Cucumis sativus] >TYK18135.1 60S ribosomal protein L22-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 235.0 bits (598), Expect = 3.7e-58
Identity = 120/126 (95.24%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MSRGSAASGGQKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           MSRG+AASGG KGKKKGV+FVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+V+
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTR+KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of Sed0016868 vs. NCBI nr
Match: XP_022953729.1 (60S ribosomal protein L22-2-like [Cucurbita moschata])

HSP 1 Score: 232.6 bits (592), Expect = 1.8e-57
Identity = 120/126 (95.24%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 1   MSRGSAASGGQKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           MSRG+AASG  KGKKKGV+FVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAV+
Sbjct: 1   MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVT 60

Query: 61  VTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTR+KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of Sed0016868 vs. NCBI nr
Match: XP_022960081.1 (60S ribosomal protein L22-2-like [Cucurbita moschata] >XP_023004692.1 60S ribosomal protein L22-2-like [Cucurbita maxima] >KAG6593201.1 60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 232.6 bits (592), Expect = 1.8e-57
Identity = 119/126 (94.44%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 1   MSRGSAASGGQKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           MSRG+AASGG KGKKKG +FVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+V+
Sbjct: 1   MSRGAAASGGPKGKKKGSTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTR+KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of Sed0016868 vs. ExPASy Swiss-Prot
Match: Q9FE58 (60S ribosomal protein L22-3 OS=Arabidopsis thaliana OX=3702 GN=RPL22C PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 1.8e-52
Identity = 106/126 (84.13%), Postives = 117/126 (92.86%), Query Frame = 0


Query: 1   MSRGSAASGGQKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           MSRG+AA+   KGKKKGVSF IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+VS
Sbjct: 1   MSRGNAAAA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVS 60

Query: 61  VTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TREK+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 120

Query: 121 EGEEED 127
           E EEED
Sbjct: 121 EAEEED 124

[Close]

BLAST of Sed0016868 vs. ExPASy Swiss-Prot
Match: Q9M9W1 (60S ribosomal protein L22-2 OS=Arabidopsis thaliana OX=3702 GN=RPL22B PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.4e-52
Identity = 106/126 (84.13%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MSRGSAASGGQKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           MSRG AA    KGKKKGVSF IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V+
Sbjct: 1   MSRGGAAVA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVT 60

Query: 61  VTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TREK+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 124

[Close]

BLAST of Sed0016868 vs. ExPASy Swiss-Prot
Match: Q9SRX7 (Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana OX=3702 GN=RPL22A PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 8.5e-42
Identity = 88/126 (69.84%), Postives = 105/126 (83.33%), Query Frame = 0


Query: 1   MSRGSAASGGQKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           M+R  A S G   KKKGVSFVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG++VS
Sbjct: 1   MARVGAKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVS 60

Query: 61  VTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TR   KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRVIASNKD+NVYE+RYF I + 
Sbjct: 61  ITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDE 120

Query: 121 EGEEED 127
               E+
Sbjct: 121 VASYEE 126

[Close]

BLAST of Sed0016868 vs. ExPASy Swiss-Prot
Match: Q90YU6 (60S ribosomal protein L22 OS=Ictalurus punctatus OX=7998 GN=rpl22 PE=2 SV=3)

HSP 1 Score: 139.0 bits (349), Expect = 3.6e-32
Identity = 78/122 (63.93%), Postives = 93/122 (76.23%), Query Frame = 0


Query: 6   AASGGQKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDAVSVTRE 65
           A  GG+K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG L G  VS+ R 
Sbjct: 8   AVKGGKK-KKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVSIERS 67

Query: 66  KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEE 125
           K+KITV SD  FSKRYLKYLTKKYLKK+N+RDWLRV+A+ K+   YELRYF I ++E EE
Sbjct: 68  KSKITVTSDIPFSKRYLKYLTKKYLKKNNLRDWLRVVANTKES--YELRYFQINQDEEEE 126

Query: 126 ED 127
           ED
Sbjct: 128 ED 126

[Close]

BLAST of Sed0016868 vs. ExPASy Swiss-Prot
Match: P47198 (60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 8.0e-32
Identity = 76/121 (62.81%), Postives = 94/121 (77.69%), Query Frame = 0


Query: 7   ASGGQKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDAVSVTREK 66
           A GG+K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG L G  V++ R K
Sbjct: 9   AKGGKK-KKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSK 68

Query: 67  NKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEE 126
           +KITV S+  FSKRYLKYLTKKYLKK+N+RDWLRV+A++K+   YELRYF I ++E EEE
Sbjct: 69  SKITVTSEEPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEE 126

[Close]

BLAST of Sed0016868 vs. ExPASy TrEMBL
Match: A0A5D3D2W6 (60S ribosomal protein L22-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00650 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.8e-58
Identity = 120/126 (95.24%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MSRGSAASGGQKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           MSRG+AASGG KGKKKGV+FVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+V+
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTR+KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of Sed0016868 vs. ExPASy TrEMBL
Match: A0A6J1JVR1 (60S ribosomal protein L22-2-like OS=Cucurbita maxima OX=3661 GN=LOC111487969 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.8e-58
Identity = 120/126 (95.24%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MSRGSAASGGQKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           MSRG+AASGG KGKKKGV+FVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAV+
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVT 60

Query: 61  VTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTR+KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYEL+YFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELKYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of Sed0016868 vs. ExPASy TrEMBL
Match: A0A0A0K637 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G397560 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.8e-58
Identity = 120/126 (95.24%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MSRGSAASGGQKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           MSRG+AASGG KGKKKGV+FVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+V+
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTR+KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of Sed0016868 vs. ExPASy TrEMBL
Match: A0A6J1DLK6 (60S ribosomal protein L22-2 OS=Momordica charantia OX=3673 GN=LOC111022271 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.8e-58
Identity = 120/126 (95.24%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MSRGSAASGGQKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           MSRG+AASGG KGKKKGV+FVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+V+
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTR+KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of Sed0016868 vs. ExPASy TrEMBL
Match: A0A1S3BRQ9 (60S ribosomal protein L22-2 OS=Cucumis melo OX=3656 GN=LOC103492808 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.8e-58
Identity = 120/126 (95.24%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MSRGSAASGGQKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           MSRG+AASGG KGKKKGV+FVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+V+
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTR+KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of Sed0016868 vs. TAIR 10
Match: AT5G27770.1 (Ribosomal L22e protein family )

HSP 1 Score: 206.5 bits (524), Expect = 1.3e-53
Identity = 106/126 (84.13%), Postives = 117/126 (92.86%), Query Frame = 0


Query: 1   MSRGSAASGGQKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           MSRG+AA+   KGKKKGVSF IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+VS
Sbjct: 1   MSRGNAAAA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVS 60

Query: 61  VTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TREK+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 120

Query: 121 EGEEED 127
           E EEED
Sbjct: 121 EAEEED 124

[Close]

BLAST of Sed0016868 vs. TAIR 10
Match: AT3G05560.1 (Ribosomal L22e protein family )

HSP 1 Score: 206.1 bits (523), Expect = 1.7e-53
Identity = 106/126 (84.13%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MSRGSAASGGQKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           MSRG AA    KGKKKGVSF IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V+
Sbjct: 1   MSRGGAAVA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVT 60

Query: 61  VTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TREK+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 124

[Close]

BLAST of Sed0016868 vs. TAIR 10
Match: AT3G05560.2 (Ribosomal L22e protein family )

HSP 1 Score: 206.1 bits (523), Expect = 1.7e-53
Identity = 106/126 (84.13%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MSRGSAASGGQKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           MSRG AA    KGKKKGVSF IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V+
Sbjct: 1   MSRGGAAVA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVT 60

Query: 61  VTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TREK+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 124

[Close]

BLAST of Sed0016868 vs. TAIR 10
Match: AT3G05560.3 (Ribosomal L22e protein family )

HSP 1 Score: 206.1 bits (523), Expect = 1.7e-53
Identity = 106/126 (84.13%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MSRGSAASGGQKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           MSRG AA    KGKKKGVSF IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V+
Sbjct: 1   MSRGGAAVA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVT 60

Query: 61  VTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TREK+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 120

Query: 121 EGEEED 127
           EGEEED
Sbjct: 121 EGEEED 124

[Close]

BLAST of Sed0016868 vs. TAIR 10
Match: AT1G02830.1 (Ribosomal L22e protein family )

HSP 1 Score: 171.0 bits (432), Expect = 6.0e-43
Identity = 88/126 (69.84%), Postives = 105/126 (83.33%), Query Frame = 0


Query: 1   MSRGSAASGGQKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           M+R  A S G   KKKGVSFVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG++VS
Sbjct: 1   MARVGAKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVS 60

Query: 61  VTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TR   KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRVIASNKD+NVYE+RYF I + 
Sbjct: 61  ITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDE 120

Query: 121 EGEEED 127
               E+
Sbjct: 121 VASYEE 126

The following BLAST results are available for this feature:

BLAST of Sed0016868 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023548993.1	1.6e-58	96.03	60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo] >KAG6575823.1 60S ...	[more]
XP_022991268.1	3.7e-58	95.24	60S ribosomal protein L22-2-like [Cucurbita maxima]	[more]
XP_004136027.1	3.7e-58	95.24	60S ribosomal protein L22-2 [Cucumis sativus] >XP_008451565.1 PREDICTED: 60S rib...	[more]
XP_022953729.1	1.8e-57	95.24	60S ribosomal protein L22-2-like [Cucurbita moschata]	[more]
XP_022960081.1	1.8e-57	94.44	60S ribosomal protein L22-2-like [Cucurbita moschata] >XP_023004692.1 60S riboso...	[more]

BLAST of Sed0016868 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FE58	1.8e-52	84.13	60S ribosomal protein L22-3 OS=Arabidopsis thaliana OX=3702 GN=RPL22C PE=2 SV=1	[more]
Q9M9W1	2.4e-52	84.13	60S ribosomal protein L22-2 OS=Arabidopsis thaliana OX=3702 GN=RPL22B PE=2 SV=1	[more]
Q9SRX7	8.5e-42	69.84	Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana OX=3702 GN=RPL22A P...	[more]
Q90YU6	3.6e-32	63.93	60S ribosomal protein L22 OS=Ictalurus punctatus OX=7998 GN=rpl22 PE=2 SV=3	[more]
P47198	8.0e-32	62.81	60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2	[more]

BLAST of Sed0016868 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D2W6	1.8e-58	95.24	60S ribosomal protein L22-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A6J1JVR1	1.8e-58	95.24	60S ribosomal protein L22-2-like OS=Cucurbita maxima OX=3661 GN=LOC111487969 PE=...	[more]
A0A0A0K637	1.8e-58	95.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G397560 PE=3 SV=1	[more]
A0A6J1DLK6	1.8e-58	95.24	60S ribosomal protein L22-2 OS=Momordica charantia OX=3673 GN=LOC111022271 PE=3 ...	[more]
A0A1S3BRQ9	1.8e-58	95.24	60S ribosomal protein L22-2 OS=Cucumis melo OX=3656 GN=LOC103492808 PE=3 SV=1	[more]

BLAST of Sed0016868 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27770.1	1.3e-53	84.13	Ribosomal L22e protein family	[more]
AT3G05560.1	1.7e-53	84.13	Ribosomal L22e protein family	[more]
AT3G05560.2	1.7e-53	84.13	Ribosomal L22e protein family	[more]
AT3G05560.3	1.7e-53	84.13	Ribosomal L22e protein family	[more]
AT1G02830.1	6.0e-43	69.84	Ribosomal L22e protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038526	Ribosomal protein L22e superfamily	GENE3D	3.30.1360.210		coord: 7..126 e-value: 5.1E-56 score: 189.8
IPR002671	Ribosomal protein L22e	PFAM	PF01776	Ribosomal_L22e	coord: 16..124 e-value: 5.2E-46 score: 155.5
IPR002671	Ribosomal protein L22e	PANTHER	PTHR10064	60S RIBOSOMAL PROTEIN L22	coord: 1..126
None	No IPR available	PANTHER	PTHR10064:SF16	60S RIBOSOMAL PROTEIN L22-2	coord: 1..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016868.1	Sed0016868.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome