Sed0016844 (gene) Chayote v1

Overview


Name	Sed0016844
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Reverse transcriptase domain-containing protein
Location	LG06: 21558696 .. 21559913 (-)
RNA-Seq Expression	Sed0016844
Synteny	Sed0016844

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAAAGGTAACCTTGAAGCAACTACGCATCTCCATGGAAGAGCTTTCTGACAGCAAGTTATTAATCCAAGGCTTCAACCAAGGCGGACAACGGGCGATTGGCATGATACGGCTTGAGGTCATCATTGGCAAGCTGAGTGCAGATGCTTTGTTCCATGTTATAGATTGTAAGACAACATATCGACTACTATTGGGACGACCCTGGATTCATGAAAACCGAGTTGTTACTTCCTCGTTGCATCAATGCTTTAAGTTTTACCAAGACGGGGTTAAGAAAGTAGAAGCTGACACAAATCCGTTCTTGGAGGCCGAGTCTCATTTCGCCGATGCAAAATTCTATGCAAAGAACGAGACTGTGGAGAAAATAGTGCCACATGAGGTCCCTGCGATAAAAGAAAGTGAAAAAGCTAAGCTAAAACCAGAGGCCGACATAAAAAAGAAATGGGTAGTGAGAAAAGAAAAGTCATGCCCAGTAAAGATAGAGGCTTCAACGAGTCTAGTAGCTCCTAAGGCTCTAAAACATGAGAAACTTCCAACTTCACCCATCTTACGCTATGTCCCTATATCCCGACGAAAAAAGGGTAAAGCACCTTTCACCGAATGTTCTAAAAAATTGAAAGTAGGTGATATTCAAGTATTGAGGGAAAGTTTCACCACTCCTTTGACAAAGATGAAAAAGCAATGGAGTCAGAGGAGCGAAGGAGATGAGAAGAATGTGGCTTTGCCTGAGAAGCGAACAAAGGATGGATTTGACCCCAATGCGTACAGACTGCTAGCTAAAGCAGGGTATGATTTCACGACACATACCGAGTTCAAACGCTTAAGTATATTTGATGACCAAGCCGAGCTTTCTTCTACGCAAAAGAAGCTGTTGAAGAAAGGTTACGCTCTACCAACATCAAGAAAAGGACTCGGATATAAGTCACCTGAACCAGTTCGCATAACAAGAAGAGAAAAGGCAAAGGTGGAAGATGCCAACCACATAACCATTGAAGAGGTTGAAGAATCAAAGGAAAATAAGAATGTTGGTCATAGGGTACCCGCCTTTAAACGCATTGGACCATCAACATCTCGTGTTTCAGCATTTCAAAGGTTAGGTACATCAAAAAGAAAAGAGAATAAAATGCCTGCTACCACCAATAAGACACAATTACCTATTTTTGAAAGATTGAATAAAGCCATGGGAGAGGCAAGAACATTCTCGACTTCAGTGTAA

mRNA sequence

ATGCCAAAGGTAACCTTGAAGCAACTACGCATCTCCATGGAAGAGCTTTCTGACAGCAAGTTATTAATCCAAGGCTTCAACCAAGGCGGACAACGGGCGATTGGCATGATACGGCTTGAGGTCATCATTGGCAAGCTGAGTGCAGATGCTTTGTTCCATGTTATAGATTGTAAGACAACATATCGACTACTATTGGGACGACCCTGGATTCATGAAAACCGAGTTGTTACTTCCTCGTTGCATCAATGCTTTAAGTTTTACCAAGACGGGGTTAAGAAAGTAGAAGCTGACACAAATCCGTTCTTGGAGGCCGAGTCTCATTTCGCCGATGCAAAATTCTATGCAAAGAACGAGACTGTGGAGAAAATAGTGCCACATGAGGTCCCTGCGATAAAAGAAAGTGAAAAAGCTAAGCTAAAACCAGAGGCCGACATAAAAAAGAAATGGGTAGTGAGAAAAGAAAAGTCATGCCCAGTAAAGATAGAGGCTTCAACGAGTCTAGTAGCTCCTAAGGCTCTAAAACATGAGAAACTTCCAACTTCACCCATCTTACGCTATGTCCCTATATCCCGACGAAAAAAGGGTAAAGCACCTTTCACCGAATGTTCTAAAAAATTGAAAGTAGGTGATATTCAAGTATTGAGGGAAAGTTTCACCACTCCTTTGACAAAGATGAAAAAGCAATGGAGTCAGAGGAGCGAAGGAGATGAGAAGAATGTGGCTTTGCCTGAGAAGCGAACAAAGGATGGATTTGACCCCAATGCGTACAGACTGCTAGCTAAAGCAGGGTATGATTTCACGACACATACCGAGTTCAAACGCTTAAGTATATTTGATGACCAAGCCGAGCTTTCTTCTACGCAAAAGAAGCTGTTGAAGAAAGGTTACGCTCTACCAACATCAAGAAAAGGACTCGGATATAAGTCACCTGAACCAGTTCGCATAACAAGAAGAGAAAAGGCAAAGGTGGAAGATGCCAACCACATAACCATTGAAGAGGTTGAAGAATCAAAGGAAAATAAGAATGTTGGTCATAGGGTACCCGCCTTTAAACGCATTGGACCATCAACATCTCGTGTTTCAGCATTTCAAAGGTTAGGTACATCAAAAAGAAAAGAGAATAAAATGCCTGCTACCACCAATAAGACACAATTACCTATTTTTGAAAGATTGAATAAAGCCATGGGAGAGGCAAGAACATTCTCGACTTCAGTGTAA

Coding sequence (CDS)

ATGCCAAAGGTAACCTTGAAGCAACTACGCATCTCCATGGAAGAGCTTTCTGACAGCAAGTTATTAATCCAAGGCTTCAACCAAGGCGGACAACGGGCGATTGGCATGATACGGCTTGAGGTCATCATTGGCAAGCTGAGTGCAGATGCTTTGTTCCATGTTATAGATTGTAAGACAACATATCGACTACTATTGGGACGACCCTGGATTCATGAAAACCGAGTTGTTACTTCCTCGTTGCATCAATGCTTTAAGTTTTACCAAGACGGGGTTAAGAAAGTAGAAGCTGACACAAATCCGTTCTTGGAGGCCGAGTCTCATTTCGCCGATGCAAAATTCTATGCAAAGAACGAGACTGTGGAGAAAATAGTGCCACATGAGGTCCCTGCGATAAAAGAAAGTGAAAAAGCTAAGCTAAAACCAGAGGCCGACATAAAAAAGAAATGGGTAGTGAGAAAAGAAAAGTCATGCCCAGTAAAGATAGAGGCTTCAACGAGTCTAGTAGCTCCTAAGGCTCTAAAACATGAGAAACTTCCAACTTCACCCATCTTACGCTATGTCCCTATATCCCGACGAAAAAAGGGTAAAGCACCTTTCACCGAATGTTCTAAAAAATTGAAAGTAGGTGATATTCAAGTATTGAGGGAAAGTTTCACCACTCCTTTGACAAAGATGAAAAAGCAATGGAGTCAGAGGAGCGAAGGAGATGAGAAGAATGTGGCTTTGCCTGAGAAGCGAACAAAGGATGGATTTGACCCCAATGCGTACAGACTGCTAGCTAAAGCAGGGTATGATTTCACGACACATACCGAGTTCAAACGCTTAAGTATATTTGATGACCAAGCCGAGCTTTCTTCTACGCAAAAGAAGCTGTTGAAGAAAGGTTACGCTCTACCAACATCAAGAAAAGGACTCGGATATAAGTCACCTGAACCAGTTCGCATAACAAGAAGAGAAAAGGCAAAGGTGGAAGATGCCAACCACATAACCATTGAAGAGGTTGAAGAATCAAAGGAAAATAAGAATGTTGGTCATAGGGTACCCGCCTTTAAACGCATTGGACCATCAACATCTCGTGTTTCAGCATTTCAAAGGTTAGGTACATCAAAAAGAAAAGAGAATAAAATGCCTGCTACCACCAATAAGACACAATTACCTATTTTTGAAAGATTGAATAAAGCCATGGGAGAGGCAAGAACATTCTCGACTTCAGTGTAA

Protein sequence

MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTTYRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFADAKFYAKNETVEKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPTSPILRYVPISRRKKGKAPFTECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPTSRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNVGHRVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERLNKAMGEARTFSTSV

Homology

[Close]

BLAST of Sed0016844 vs. NCBI nr
Match: XP_031739134.1 (uncharacterized protein LOC116402863 [Cucumis sativus])

HSP 1 Score: 419.9 bits (1078), Expect = 2.6e-113
Identity = 227/391 (58.06%), Postives = 283/391 (72.38%), Query Frame = 0


Query: 1    MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTT 60
            MPK T+ QL I M+ELS+SKL+IQGFNQG QRAIGMIRLE+IIG L A ALFHVID +TT
Sbjct: 774  MPKSTMWQLGILMDELSNSKLVIQGFNQGSQRAIGMIRLELIIGDLKASALFHVIDSRTT 833

Query: 61   YRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFADAKFYAKNETV 120
            Y+LLLGRPWIH N VVTS+LHQCFKFYQDGVKKVEAD+NPF EAESHFADAKFY+KN  +
Sbjct: 834  YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAESHFADAKFYSKNNNI 893

Query: 121  EKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPT 180
             +++P E P  K  + ++LK  A  +     R   S   K EA TS      LK E    
Sbjct: 894  LEVLPAETPLTKGEDNSQLKSLATTEPHESARTFNS--GKGEAYTSSTKGMILKDENAAN 953

Query: 181  SPILRYVPISRRKKGKAPFTECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNV 240
            +P+LRYVP+SRRKKG++PF E  K LKVGDI++++ESFTTPLTK+ K   Q  + D    
Sbjct: 954  TPVLRYVPLSRRKKGESPFMESPKGLKVGDIEIIKESFTTPLTKIAK---QEVKVDLVEA 1013

Query: 241  ALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPT 300
             LP++RTKDGFDP AY+L+AKAGYDFT HTEFK L I  D+ ELSSTQKKLL++G+++P 
Sbjct: 1014 NLPQRRTKDGFDPKAYKLMAKAGYDFTAHTEFKSLEI-HDRPELSSTQKKLLREGHSIPV 1073

Query: 301  SRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNVGHRVPAFKRIGPSTSRV 360
            SRKGLGYKSPEP+RIT++ K KV D NHITIEE + +   +    R+  F RI PS +R 
Sbjct: 1074 SRKGLGYKSPEPIRITKKGKEKVVDINHITIEEDDNTDVKEGDNQRISVFDRIRPSVARP 1133

Query: 361  SAFQRLGTSKRKENKMPATTNKTQLPIFERL 392
              F+RL  ++ +  ++ +  N  +  +F RL
Sbjct: 1134 VVFERLSMTEAERERLQSVPNLERHSVFRRL 1158

[Close]

BLAST of Sed0016844 vs. NCBI nr
Match: XP_031737372.1 (uncharacterized protein LOC116402244 [Cucumis sativus])

HSP 1 Score: 419.9 bits (1078), Expect = 2.6e-113
Identity = 227/391 (58.06%), Postives = 283/391 (72.38%), Query Frame = 0


Query: 1   MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTT 60
           MPK T+ QL I M+ELS+SKL+IQGFNQG QRAIGMIRLE+IIG L A ALFHVID +TT
Sbjct: 149 MPKSTMWQLGILMDELSNSKLVIQGFNQGSQRAIGMIRLELIIGDLKASALFHVIDSRTT 208

Query: 61  YRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFADAKFYAKNETV 120
           Y+LLLGRPWIH N VVTS+LHQCFKFYQDGVKKVEAD+NPF EAESHFADAKFY+KN  +
Sbjct: 209 YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAESHFADAKFYSKNNNI 268

Query: 121 EKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPT 180
            +++P E P  K  + ++LK  A  +     R   S   K EA TS      LK E    
Sbjct: 269 LEVLPAETPLTKGEDNSQLKSLATTEPHESARTFNS--GKGEAYTSSTKGMILKDENAAN 328

Query: 181 SPILRYVPISRRKKGKAPFTECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNV 240
           +P+LRYVP+SRRKKG++PF E  K LKVGDI++++ESFTTPLTK+ K   Q  + D    
Sbjct: 329 TPVLRYVPLSRRKKGESPFMESPKGLKVGDIEIIKESFTTPLTKIAK---QEVKVDLVEA 388

Query: 241 ALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPT 300
            LP++RTKDGFDP AY+L+AKAGYDFT HTEFK L I  D+ ELSSTQKKLL++G+++P 
Sbjct: 389 NLPQRRTKDGFDPKAYKLMAKAGYDFTAHTEFKSLEI-HDRPELSSTQKKLLREGHSIPV 448

Query: 301 SRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNVGHRVPAFKRIGPSTSRV 360
           SRKGLGYKSPEP+RIT++ K KV D NHITIEE + +   +    R+  F RI PS +R 
Sbjct: 449 SRKGLGYKSPEPIRITKKGKEKVVDINHITIEEDDNTDVKEGDNQRISVFDRIRPSVARP 508

Query: 361 SAFQRLGTSKRKENKMPATTNKTQLPIFERL 392
             F+RL  ++ +  ++ +  N  +  +F RL
Sbjct: 509 VVFERLSMTEAERERLQSVPNLERHSVFRRL 533

[Close]

BLAST of Sed0016844 vs. NCBI nr
Match: XP_031740568.1 (uncharacterized protein LOC116403508 [Cucumis sativus])

HSP 1 Score: 419.9 bits (1078), Expect = 2.6e-113
Identity = 227/391 (58.06%), Postives = 283/391 (72.38%), Query Frame = 0


Query: 1    MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTT 60
            MPK T+ QL I M+ELS+SKL+IQGFNQG QRAIGMIRLE+IIG L A ALFHVID +TT
Sbjct: 774  MPKSTMWQLGILMDELSNSKLVIQGFNQGSQRAIGMIRLELIIGDLKASALFHVIDSRTT 833

Query: 61   YRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFADAKFYAKNETV 120
            Y+LLLGRPWIH N VVTS+LHQCFKFYQDGVKKVEAD+NPF EAESHFADAKFY+KN  +
Sbjct: 834  YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAESHFADAKFYSKNNNI 893

Query: 121  EKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPT 180
             +++P E P  K  + ++LK  A  +     R   S   K EA TS      LK E    
Sbjct: 894  LEVLPAETPLTKGEDNSQLKSLATTEPHESARTFNS--GKGEAYTSSTKGMILKDENAAN 953

Query: 181  SPILRYVPISRRKKGKAPFTECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNV 240
            +P+LRYVP+SRRKKG++PF E  K LKVGDI++++ESFTTPLTK+ K   Q  + D    
Sbjct: 954  TPVLRYVPLSRRKKGESPFMESPKGLKVGDIEIIKESFTTPLTKIAK---QEVKVDLVEA 1013

Query: 241  ALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPT 300
             LP++RTKDGFDP AY+L+AKAGYDFT HTEFK L I  D+ ELSSTQKKLL++G+++P 
Sbjct: 1014 NLPQRRTKDGFDPKAYKLMAKAGYDFTAHTEFKSLEI-HDRPELSSTQKKLLREGHSIPV 1073

Query: 301  SRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNVGHRVPAFKRIGPSTSRV 360
            SRKGLGYKSPEP+RIT++ K KV D NHITIEE + +   +    R+  F RI PS +R 
Sbjct: 1074 SRKGLGYKSPEPIRITKKGKEKVVDINHITIEEDDNTDVKEGDNQRISVFDRIRPSVARP 1133

Query: 361  SAFQRLGTSKRKENKMPATTNKTQLPIFERL 392
              F+RL  ++ +  ++ +  N  +  +F RL
Sbjct: 1134 VVFERLSMTEAERERLQSVPNLERHSVFRRL 1158

[Close]

BLAST of Sed0016844 vs. NCBI nr
Match: XP_031742032.1 (uncharacterized protein LOC116404025 [Cucumis sativus])

HSP 1 Score: 419.5 bits (1077), Expect = 3.4e-113
Identity = 227/391 (58.06%), Postives = 283/391 (72.38%), Query Frame = 0


Query: 1    MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTT 60
            MPK T+ QL I M+ELS+SKL+IQGFNQG QRAIGMIRLE+IIG L A ALFHVID +TT
Sbjct: 774  MPKSTMWQLGILMDELSNSKLVIQGFNQGSQRAIGMIRLELIIGDLKASALFHVIDSRTT 833

Query: 61   YRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFADAKFYAKNETV 120
            Y+LLLGRPWIH N VVTS+LHQCFKFYQDGVKKVEAD+NPF EAESHFADAKFY+KN  +
Sbjct: 834  YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAESHFADAKFYSKNNNI 893

Query: 121  EKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPT 180
             +++P E P  K  + ++LK  A  +     R   S   K EA TS      LK E    
Sbjct: 894  LEVLPAETPLTKGEDNSQLKSLATTEPHESARTFNS--GKGEAYTSNTKGMILKDENAAN 953

Query: 181  SPILRYVPISRRKKGKAPFTECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNV 240
            +P+LRYVP+SRRKKG++PF E  K LKVGDI++++ESFTTPLTK+ K   Q  + D    
Sbjct: 954  TPVLRYVPLSRRKKGESPFMESPKGLKVGDIEIIKESFTTPLTKIAK---QEVKVDLVEA 1013

Query: 241  ALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPT 300
             LP++RTKDGFDP AY+L+AKAGYDFT HTEFK L I  D+ ELSSTQKKLL++G+++P 
Sbjct: 1014 NLPQRRTKDGFDPKAYKLMAKAGYDFTAHTEFKSLEI-HDRPELSSTQKKLLREGHSIPV 1073

Query: 301  SRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNVGHRVPAFKRIGPSTSRV 360
            SRKGLGYKSPEP+RIT++ K KV D NHITIEE + +   +    R+  F RI PS +R 
Sbjct: 1074 SRKGLGYKSPEPIRITKKGKEKVVDINHITIEEDDNTDVKEGDNQRISVFDRIRPSVARP 1133

Query: 361  SAFQRLGTSKRKENKMPATTNKTQLPIFERL 392
              F+RL  ++ +  ++ +  N  +  +F RL
Sbjct: 1134 VVFERLSMTEAERERLQSVPNLERHSVFRRL 1158

[Close]

BLAST of Sed0016844 vs. NCBI nr
Match: XP_031737045.1 (uncharacterized protein LOC116402134 [Cucumis sativus])

HSP 1 Score: 418.3 bits (1074), Expect = 7.5e-113
Identity = 226/391 (57.80%), Postives = 283/391 (72.38%), Query Frame = 0


Query: 1   MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTT 60
           MPK T+ QL I M+ELS+SKL+IQGFNQG QRAIG+IRLE+IIG L A ALFHVID +TT
Sbjct: 149 MPKSTMWQLGILMDELSNSKLVIQGFNQGSQRAIGIIRLELIIGDLKASALFHVIDSRTT 208

Query: 61  YRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFADAKFYAKNETV 120
           Y+LLLGRPWIH N VVTS+LHQCFKFYQDGVKKVEAD+NPF EAESHFADAKFY+KN  +
Sbjct: 209 YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAESHFADAKFYSKNNNI 268

Query: 121 EKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPT 180
            +++P E P  K  + ++LK  A  +     R   S   K EA TS      LK E    
Sbjct: 269 LEVLPAETPLTKGEDNSQLKSLATTEPHESARTFNS--GKGEAYTSSTKGMILKDENAAN 328

Query: 181 SPILRYVPISRRKKGKAPFTECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNV 240
           +P+LRYVP+SRRKKG++PF E  K LKVGDI++++ESFTTPLTK+ K   Q  + D    
Sbjct: 329 TPVLRYVPLSRRKKGESPFMESPKGLKVGDIEIIKESFTTPLTKIAK---QEVKVDLVEA 388

Query: 241 ALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPT 300
            LP++RTKDGFDP AY+L+AKAGYDFT HTEFK L I  D+ ELSSTQKKLL++G+++P 
Sbjct: 389 NLPQRRTKDGFDPKAYKLMAKAGYDFTAHTEFKSLEI-HDRPELSSTQKKLLREGHSIPV 448

Query: 301 SRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNVGHRVPAFKRIGPSTSRV 360
           SRKGLGYKSPEP+RIT++ K KV D NHITIEE + +   +    R+  F RI PS +R 
Sbjct: 449 SRKGLGYKSPEPIRITKKGKEKVVDINHITIEEDDNTDVKEGDNQRISVFDRIRPSVARP 508

Query: 361 SAFQRLGTSKRKENKMPATTNKTQLPIFERL 392
             F+RL  ++ +  ++ +  N  +  +F RL
Sbjct: 509 VVFERLSMTEAERERLQSVPNLERHSVFRRL 533

[Close]

BLAST of Sed0016844 vs. ExPASy TrEMBL
Match: A0A5A7UD46 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G001280 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 3.1e-112
Identity = 226/399 (56.64%), Postives = 285/399 (71.43%), Query Frame = 0


Query: 1   MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTT 60
           MPK T++QL I MEELS+SKL+IQGFNQG QR IGMIRLE+IIG L   ALFHVID +TT
Sbjct: 154 MPKSTMRQLGILMEELSNSKLIIQGFNQGSQRIIGMIRLELIIGDLKDSALFHVIDSRTT 213

Query: 61  YRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFADAKFYAKNETV 120
           Y+LLLGRPWIH N VVTS+LHQCFKFYQDGVKKVEAD+NPF EAESHFADAKFY KN++ 
Sbjct: 214 YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAESHFADAKFYLKNDSS 273

Query: 121 EKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPT 180
            ++V  EV  +   +  +LK  A  +    +    S   K EAST+      L  EK   
Sbjct: 274 LEVVSVEVLLVNREDNLQLKSLASKEPHKSIGTFHS--GKSEASTNTAKSVILMDEKTSN 333

Query: 181 SPILRYVPISRRKKGKAPFTECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNV 240
            PILRYVP+SRRKKG++PF E  + LKVG+I+VL+ESFTTPLTK+ K   Q  + D    
Sbjct: 334 PPILRYVPLSRRKKGESPFVESPQGLKVGEIEVLKESFTTPLTKITK---QEIKIDLTEA 393

Query: 241 ALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPT 300
           +LP++RTKDGFDP AY+L+AKAGYDFTTHTEFK L I+ +Q +LSSTQKKLL++G+ +P 
Sbjct: 394 SLPQRRTKDGFDPKAYKLMAKAGYDFTTHTEFKSLKIY-EQPKLSSTQKKLLREGHVIPM 453

Query: 301 SRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNVGHRVPAFKRIGPSTSRV 360
           SRKGLGYKSPEP+RITR+ K KV D+NHIT++E +  +E +    R  AF RI P  +R 
Sbjct: 454 SRKGLGYKSPEPIRITRKGKEKVVDSNHITLKEADSMEEKEGDSQRTSAFDRISPHVARA 513

Query: 361 SAFQRLGTSKRKENKMPATTNKTQLPIFERLNKAMGEAR 400
             F++L  ++ +     +T+N  +   F+RL     E +
Sbjct: 514 PVFEKLSMTEAERKDHQSTSNLDRRSAFQRLTITFKEEK 546

[Close]

BLAST of Sed0016844 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 9.2e-109
Identity = 214/407 (52.58%), Postives = 288/407 (70.76%), Query Frame = 0


Query: 1    MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTT 60
            +PK T+ QL IS+EELS+SKL+IQGFNQG QRAIG +RLEV+IG L A  +FHVID +TT
Sbjct: 766  LPKSTMNQLGISVEELSNSKLVIQGFNQGAQRAIGTVRLEVVIGDLQASTIFHVIDSRTT 825

Query: 61   YRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFADAKFYAKNETV 120
            Y++LLGRPWIHEN +VTS+LHQCFKFY+ G+KKV+AD+ PF +AESHFADAKFY K+E V
Sbjct: 826  YKMLLGRPWIHENGIVTSTLHQCFKFYKQGIKKVDADSRPFTKAESHFADAKFYTKSEDV 885

Query: 121  EKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALK----HE 180
             +I+  EVP  K + K + +     K             ++   T L AP+A K     +
Sbjct: 886  SEIISTEVPVTKGTFKNEQEMITSKKSSKGDALNSQQNGELTTETKLRAPEAEKIATLQK 945

Query: 181  KLPTSPILRYVPISRRKKGKAPFTECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGD 240
            ++   P+LRY+P+SRRKKG++PFTECSK L V + ++L+E+FT PLTK++K  +++ E  
Sbjct: 946  EVSNPPVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEAKKIEKK 1005

Query: 241  EKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGY 300
            +    LPE+RT +GFDP AY+L+AKAGYDFTT TE K + IFD++ ELS TQKKL K+GY
Sbjct: 1006 DLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGY 1065

Query: 301  ALPTSRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNV-GHRVPAFKRIGP 360
            ++P SR G+GY+S EPVRIT + KAKV +  HIT+EE ++S+E K V   R   F RI  
Sbjct: 1066 SIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDRIAF 1125

Query: 361  STSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERLNKAMGEARTFS 403
            S  R S FQR+ TS  K++   +T + T+L  F+RLN +  + R+ S
Sbjct: 1126 SAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKKVRSIS 1172

[Close]

BLAST of Sed0016844 vs. ExPASy TrEMBL
Match: A0A5D3BIH8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001270 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 9.2e-109
Identity = 214/407 (52.58%), Postives = 288/407 (70.76%), Query Frame = 0


Query: 1    MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTT 60
            +PK T+ QL IS+EELS+SKL+IQGFNQG QRAIG +RLEV+IG L A  +FHVID +TT
Sbjct: 744  LPKSTMNQLGISVEELSNSKLVIQGFNQGAQRAIGTVRLEVVIGDLQASTIFHVIDSRTT 803

Query: 61   YRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFADAKFYAKNETV 120
            Y++LLGRPWIHEN +VTS+LHQCFKFY+ G+KKV+AD+ PF +AESHFADAKFY K+E V
Sbjct: 804  YKMLLGRPWIHENGIVTSTLHQCFKFYKQGIKKVDADSRPFTKAESHFADAKFYTKSEDV 863

Query: 121  EKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALK----HE 180
             +I+  EVP  K + K + +     K             ++   T L AP+A K     +
Sbjct: 864  SEIISTEVPVTKGTFKNEQEMITSKKSSKGDALNSQQNGELTTETKLRAPEAEKIATLQK 923

Query: 181  KLPTSPILRYVPISRRKKGKAPFTECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGD 240
            ++   P+LRY+P+SRRKKG++PFTECSK L V + ++L+E+FT PLTK++K  +++ E  
Sbjct: 924  EVSNPPVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEAKKIEKK 983

Query: 241  EKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGY 300
            +    LPE+RT +GFDP AY+L+AKAGYDFTT TE K + IFD++ ELS TQKKL K+GY
Sbjct: 984  DLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGY 1043

Query: 301  ALPTSRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNV-GHRVPAFKRIGP 360
            ++P SR G+GY+S EPVRIT + KAKV +  HIT+EE ++S+E K V   R   F RI  
Sbjct: 1044 SIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDRIAF 1103

Query: 361  STSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERLNKAMGEARTFS 403
            S  R S FQR+ TS  K++   +T + T+L  F+RLN +  + R+ S
Sbjct: 1104 SAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKKVRSIS 1150

[Close]

BLAST of Sed0016844 vs. ExPASy TrEMBL
Match: A0A5D3D1E5 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G004020 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 9.2e-109
Identity = 214/407 (52.58%), Postives = 288/407 (70.76%), Query Frame = 0


Query: 1    MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTT 60
            +PK T+ QL IS+EELS+SKL+IQGFNQG QRAIG +RLEV+IG L A  +FHVID +TT
Sbjct: 696  LPKSTMNQLGISVEELSNSKLVIQGFNQGAQRAIGTVRLEVVIGDLQASTIFHVIDSRTT 755

Query: 61   YRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFADAKFYAKNETV 120
            Y++LLGRPWIHEN +VTS+LHQCFKFY+ G+KKV+AD+ PF +AESHFADAKFY K+E V
Sbjct: 756  YKMLLGRPWIHENGIVTSTLHQCFKFYKQGIKKVDADSRPFTKAESHFADAKFYTKSEDV 815

Query: 121  EKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALK----HE 180
             +I+  EVP  K + K + +     K             ++   T L AP+A K     +
Sbjct: 816  SEIISTEVPVTKGTFKNEQEMITSKKSSKGDALNSQQNGELTTETKLRAPEAEKIATLQK 875

Query: 181  KLPTSPILRYVPISRRKKGKAPFTECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGD 240
            ++   P+LRY+P+SRRKKG++PFTECSK L V + ++L+E+FT PLTK++K  +++ E  
Sbjct: 876  EVSNPPVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEAKKIEKK 935

Query: 241  EKNVALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGY 300
            +    LPE+RT +GFDP AY+L+AKAGYDFTT TE K + IFD++ ELS TQKKL K+GY
Sbjct: 936  DLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGY 995

Query: 301  ALPTSRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNV-GHRVPAFKRIGP 360
            ++P SR G+GY+S EPVRIT + KAKV +  HIT+EE ++S+E K V   R   F RI  
Sbjct: 996  SIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDRIAF 1055

Query: 361  STSRVSAFQRLGTSKRKENKMPATTNKTQLPIFERLNKAMGEARTFS 403
            S  R S FQR+ TS  K++   +T + T+L  F+RLN +  + R+ S
Sbjct: 1056 SAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKKVRSIS 1102

[Close]

BLAST of Sed0016844 vs. ExPASy TrEMBL
Match: A0A5A7UEC9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00760 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 1.6e-108
Identity = 220/376 (58.51%), Postives = 274/376 (72.87%), Query Frame = 0


Query: 1   MPKVTLKQLRISMEELSDSKLLIQGFNQGGQRAIGMIRLEVIIGKLSADALFHVIDCKTT 60
           MPK T++Q  I MEEL +SKL+IQGFNQG QR IG+IRLE+IIG L A ALFHVI+ +TT
Sbjct: 1   MPKSTMRQSGILMEELLNSKLVIQGFNQGSQRVIGIIRLELIIGDLKASALFHVINSRTT 60

Query: 61  YRLLLGRPWIHENRVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFADAKFYAKNETV 120
           Y+LLLGRPWIH N VVTS+LH CFKFYQDGVKKVE D+NPF EAESHFADAKFY KN++ 
Sbjct: 61  YKLLLGRPWIHGNGVVTSTLHHCFKFYQDGVKKVEVDSNPFSEAESHFADAKFYLKNDSS 120

Query: 121 EKIVPHEVPAIKESEKAKLKPEADIKKKWVVRKEKSCPVKIEASTSLVAPKALKHEKLPT 180
            + V  EVP +   +  +LK  A  +    +    S   K E STS      L  EK   
Sbjct: 121 PEAVSKEVPLVNREDNLQLKSLASKEPHKSIGTFHS--GKSEVSTSTAKSVILMDEKTSN 180

Query: 181 SPILRYVPISRRKKGKAPFTECSKKLKVGDIQVLRESFTTPLTKMKKQWSQRSEGDEKNV 240
            PILRYVP+SRRKKG++PF E  + LKVGDI+VL+ESFTTPLTK+ K   +  + D    
Sbjct: 181 PPILRYVPLSRRKKGESPFVESPQGLKVGDIEVLKESFTTPLTKINK---KEIKIDLTEA 240

Query: 241 ALPEKRTKDGFDPNAYRLLAKAGYDFTTHTEFKRLSIFDDQAELSSTQKKLLKKGYALPT 300
           +LP++RTKDGFDP AY+L+AKAGYDF THTEFK L I  +Q +LSSTQKKLL++G+A+P 
Sbjct: 241 SLPQRRTKDGFDPKAYKLMAKAGYDFITHTEFKILKI-HEQPKLSSTQKKLLQEGHAIPM 300

Query: 301 SRKGLGYKSPEPVRITRREKAKVEDANHITIEEVEESKENKNVGHRVPAFKRIGPSTSRV 360
           SRKGLGYKSPEP+RITR+ K KV D+NHIT++EV+  +E ++   R  AF RI P  +R 
Sbjct: 301 SRKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEEKEDDSQRTSAFDRISPHVARA 360

Query: 361 SAFQRLGT--SKRKEN 375
             F+RL    ++RK++
Sbjct: 361 PVFERLSVIEAERKDH 370

The following BLAST results are available for this feature:

BLAST of Sed0016844 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031739134.1	2.6e-113	58.06	uncharacterized protein LOC116402863 [Cucumis sativus]	[more]
XP_031737372.1	2.6e-113	58.06	uncharacterized protein LOC116402244 [Cucumis sativus]	[more]
XP_031740568.1	2.6e-113	58.06	uncharacterized protein LOC116403508 [Cucumis sativus]	[more]
XP_031742032.1	3.4e-113	58.06	uncharacterized protein LOC116404025 [Cucumis sativus]	[more]
XP_031737045.1	7.5e-113	57.80	uncharacterized protein LOC116402134 [Cucumis sativus]	[more]

BLAST of Sed0016844 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0016844 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UD46	3.1e-112	56.64	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TZU9	9.2e-109	52.58	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940...	[more]
A0A5D3BIH8	9.2e-109	52.58	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3D1E5	9.2e-109	52.58	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00402...	[more]
A0A5A7UEC9	1.6e-108	58.51	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Sed0016844 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016844.1	Sed0016844.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process