Sed0016823 (gene) Chayote v1

Overview


Name	Sed0016823
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Auxin responsive SAUR protein
Location	LG01: 18707600 .. 18708319 (+)
RNA-Seq Expression	Sed0016823
Synteny	Sed0016823

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGCCGGAATCGGAAAATGCAGCAAAATCCGGCACATTGTCAGGCTCCGGCAAATGCTCCGGCAGTGGCGAAACAAGGCTCGAATGTCCGCCAACCGCATCCCGGCCGACGTGCCCGCCGGACACGTGGCCGTCTGCGTCGGAACCGGCTGCCGGCGCTTCGTCGTCCGGGCCACTTACTTGAACCACCCGGTTTTCAAGAAGCTTCTGGTCCAAGCCGAAGAGGAGTACGGGTTTTCCAATCAGGGCCCCTTGGCGATCCCCTGCGACGAGTCGGTTTTCGAAGAGGTCCTCCGGTTCATCTCCAGATCCGAGTCGCCCAACTCGGGCCGGTTTATGAAATTCGACGATTTTCAAAGTTACTGCCATATCGGAATCCGAACCGGGCTCGATTTGTGGCCGGAATCTCGGCCTTTGCTTCATGGGTTGGCCGAGAAGTCCATTTGGTAATGTGGGCATTTTTGTGAAAATCCATCTGAATGGGCGGAGTCAAAGATTCCTCGGTTTGAGTTACCCGAGATGGTTTTTTTTGCCCCCATAAACAAATTGAGGGGTTATTTTTCCAAAAACAAATTGTAAAACTAGTGTAACGTGATTACTAAGGGGAGTGAATTTTAGCTCCAGAGAAACTTATGGAGATGGCAAAACGGGTGGAGAGATCATTCCACTGTCGTCATCCCGAGCCCGAATCGGAGTCGGGGCGAAACCGAAAACTAG

mRNA sequence

ATGTCGGCCGGAATCGGAAAATGCAGCAAAATCCGGCACATTGTCAGGCTCCGGCAAATGCTCCGGCAGTGGCGAAACAAGGCTCGAATGTCCGCCAACCGCATCCCGGCCGACGTGCCCGCCGGACACGTGGCCGTCTGCGTCGGAACCGGCTGCCGGCGCTTCGTCGTCCGGGCCACTTACTTGAACCACCCGGTTTTCAAGAAGCTTCTGGTCCAAGCCGAAGAGGAGTACGGGTTTTCCAATCAGGGCCCCTTGGCGATCCCCTGCGACGAGTCGGTTTTCGAAGAGGTCCTCCGGTTCATCTCCAGATCCGAGTCGCCCAACTCGGGCCGGTTTATGAAATTCGACGATTTTCAAAGTTACTGCCATATCGGAATCCGAACCGGGCTCGATTTGTGGCCGGAATCTCGGCCTTTGCTTCATGGGTTGGCCGAGAAAAACTTATGGAGATGGCAAAACGGGTGGAGAGATCATTCCACTGTCGTCATCCCGAGCCCGAATCGGAGTCGGGGCGAAACCGAAAACTAG

Coding sequence (CDS)

ATGTCGGCCGGAATCGGAAAATGCAGCAAAATCCGGCACATTGTCAGGCTCCGGCAAATGCTCCGGCAGTGGCGAAACAAGGCTCGAATGTCCGCCAACCGCATCCCGGCCGACGTGCCCGCCGGACACGTGGCCGTCTGCGTCGGAACCGGCTGCCGGCGCTTCGTCGTCCGGGCCACTTACTTGAACCACCCGGTTTTCAAGAAGCTTCTGGTCCAAGCCGAAGAGGAGTACGGGTTTTCCAATCAGGGCCCCTTGGCGATCCCCTGCGACGAGTCGGTTTTCGAAGAGGTCCTCCGGTTCATCTCCAGATCCGAGTCGCCCAACTCGGGCCGGTTTATGAAATTCGACGATTTTCAAAGTTACTGCCATATCGGAATCCGAACCGGGCTCGATTTGTGGCCGGAATCTCGGCCTTTGCTTCATGGGTTGGCCGAGAAAAACTTATGGAGATGGCAAAACGGGTGGAGAGATCATTCCACTGTCGTCATCCCGAGCCCGAATCGGAGTCGGGGCGAAACCGAAAACTAG

Protein sequence

MSAGIGKCSKIRHIVRLRQMLRQWRNKARMSANRIPADVPAGHVAVCVGTGCRRFVVRATYLNHPVFKKLLVQAEEEYGFSNQGPLAIPCDESVFEEVLRFISRSESPNSGRFMKFDDFQSYCHIGIRTGLDLWPESRPLLHGLAEKNLWRWQNGWRDHSTVVIPSPNRSRGETEN

Homology

[Close]

BLAST of Sed0016823 vs. NCBI nr
Match: KGN60020.1 (hypothetical protein Csa_001829 [Cucumis sativus])

HSP 1 Score: 315.8 bits (808), Expect = 2.3e-82
Identity = 153/181 (84.53%), Postives = 161/181 (88.95%), Query Frame = 0


Query: 1   MSAGIGKCSKIRHIVRLRQMLRQWRNKARMSANRIPADVPAGHVAVCVGTGCRRFVVRAT 60
           MSAG+GKCSKIRHIVRLRQMLR+WRNKARMSANRIP+DVPAGHVAVCVGT  RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFSNQGPLAIPCDESVFEEVLRFISRSESPNSGRFMKFDDFQ 120
           YLNHPVFKKLLVQAEEEYGF+NQGPLAIPCDESVFEEV+RFISRSESPNSGRF+K DDFQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKN------LWRWQNGWRDHSTVVIPSPNRSRGET 176
           SYCHIGIRTGLDLWPESRPLLHGLAEK+      LWRWQ         V+PS NRSRG T
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSICSGECLWRWQKLVEGSIHHVVPSSNRSRGGT 180

[Close]

BLAST of Sed0016823 vs. NCBI nr
Match: XP_038899268.1 (auxin-induced protein 6B-like [Benincasa hispida])

HSP 1 Score: 301.6 bits (771), Expect = 4.4e-78
Identity = 138/150 (92.00%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MSAGIGKCSKIRHIVRLRQMLRQWRNKARMSANRIPADVPAGHVAVCVGTGCRRFVVRAT 60
           MSAG+GKCSKIRHIVRLRQMLR+WRNKARMSANRIP+DVPAGHVAVCVGT CRRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFSNQGPLAIPCDESVFEEVLRFISRSESPNSGRFMKFDDFQ 120
           YLNHP+FKKLLVQAEEEYGF+NQGPLAIPC+ESVFEEV+RFISRSESPNSGRF+K DDFQ
Sbjct: 61  YLNHPIFKKLLVQAEEEYGFTNQGPLAIPCEESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKNLW 151
           SYCHIGIRTGLDLWPESRPLLHGLAEK++W
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of Sed0016823 vs. NCBI nr
Match: XP_023535898.1 (auxin-induced protein 6B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.1 bits (767), Expect = 1.3e-77
Identity = 137/150 (91.33%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MSAGIGKCSKIRHIVRLRQMLRQWRNKARMSANRIPADVPAGHVAVCVGTGCRRFVVRAT 60
           MSAG+GKCSKIRHIVRLRQMLR+WRNKARMSANRIP+DVPAGHVAVCVGT CRRFVVRAT
Sbjct: 1   MSAGVGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFSNQGPLAIPCDESVFEEVLRFISRSESPNSGRFMKFDDFQ 120
           YLNHPVFKKLLVQAEEEYGF+NQGPLAIPCDESVFEEV+RFISRS+SPNSGRF+K D+FQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120

Query: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKNLW 151
           +YCHIGIRTGLDLWPESRPLLHGLAEK++W
Sbjct: 121 TYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of Sed0016823 vs. NCBI nr
Match: XP_011652445.1 (auxin-induced protein 6B [Cucumis sativus])

HSP 1 Score: 299.7 bits (766), Expect = 1.7e-77
Identity = 139/150 (92.67%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 1   MSAGIGKCSKIRHIVRLRQMLRQWRNKARMSANRIPADVPAGHVAVCVGTGCRRFVVRAT 60
           MSAG+GKCSKIRHIVRLRQMLR+WRNKARMSANRIP+DVPAGHVAVCVGT  RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFSNQGPLAIPCDESVFEEVLRFISRSESPNSGRFMKFDDFQ 120
           YLNHPVFKKLLVQAEEEYGF+NQGPLAIPCDESVFEEV+RFISRSESPNSGRF+K DDFQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKNLW 151
           SYCHIGIRTGLDLWPESRPLLHGLAEK++W
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of Sed0016823 vs. NCBI nr
Match: XP_022936801.1 (auxin-induced protein 6B [Cucurbita moschata] >KAG6591279.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 299.7 bits (766), Expect = 1.7e-77
Identity = 137/150 (91.33%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MSAGIGKCSKIRHIVRLRQMLRQWRNKARMSANRIPADVPAGHVAVCVGTGCRRFVVRAT 60
           MSAG+GKCSKIRHIVRLRQMLR+WRNKARMSANRIP+DVPAGHVAVCVGT CRRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFSNQGPLAIPCDESVFEEVLRFISRSESPNSGRFMKFDDFQ 120
           YLNHPVFKKLLVQAEEEYGF+NQGPLAIPCDESVFEEV+RFISRS+SPNSGRF+K D+FQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120

Query: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKNLW 151
           +YCHIGIRTGLDLWPESRPLLHGLAEK++W
Sbjct: 121 TYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of Sed0016823 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-12
Identity = 39/101 (38.61%), Postives = 57/101 (56.44%), Query Frame = 0


Query: 7   KCSKIRHIVRLRQMLRQW-----RNKARMSANRIPADVPAGHVAVCVGTGCRRFVVRATY 66
           K SK+     L+Q+L++      +N      + +P DVP GH  V VG    R++V  ++
Sbjct: 6   KTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPISF 65

Query: 67  LNHPVFKKLLVQAEEEYGFSNQGPLAIPCDESVFEEVLRFI 103
           L HP F+ LL +AEEE+GF +   L IPCDE VF+ +   I
Sbjct: 66  LTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMI 106

[Close]

BLAST of Sed0016823 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.5e-12
Identity = 38/80 (47.50%), Postives = 46/80 (57.50%), Query Frame = 0


Query: 20  MLRQWRNKARMSANRIPADVPAGHVAVCVGTGCRRFVVRATYLNHPVFKKLLVQAEEEYG 79
           +LR    + R    +  + VP GHV V VG    RFVV A  LNHPVF  LL Q+ +EYG
Sbjct: 19  LLRSESQRGRTKKEKHKSWVPEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYG 78

Query: 80  FSNQGPLAIPCDESVFEEVL 100
           +  QG L IPC   VFE +L
Sbjct: 79  YEQQGVLRIPCHVLVFERIL 98

[Close]

BLAST of Sed0016823 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.7e-12
Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 0


Query: 27  KARMSANRIPA---DVPAGHVAVCVGTGCRRFVVRATYLNHPVFKKLLVQAEEEYGFSN- 86
           KA  SAN+  +   DV  G++AV VG   RRFV+  +YLN P F+ LL QAEEE+G+ + 
Sbjct: 10  KASFSANQASSKAVDVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHP 69

Query: 87  QGPLAIPCDESVFEEVLRFIS 104
            G L IPC E VF+ +  F++
Sbjct: 70  NGGLTIPCSEDVFQHITSFLN 90

[Close]

BLAST of Sed0016823 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.9e-11
Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 0


Query: 35  IPADVPAGHVAVCVGTGCRRFVVRATYLNHPVFKKLLVQAEEEYGFSNQGPLAIPCDESV 94
           + + VP+GHV V VG    RFVV A  LNHPVF  LL ++ +EYG++ +G L IPC+  V
Sbjct: 44  VASSVPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFV 103

Query: 95  FEEVL 100
           FE+V+
Sbjct: 104 FEQVV 108

[Close]

BLAST of Sed0016823 vs. ExPASy Swiss-Prot
Match: O22150 (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.7e-11
Identity = 43/113 (38.05%), Postives = 63/113 (55.75%), Query Frame = 0


Query: 8   CSKIRHIVRLR---QMLRQ-WRNKARMSANRIPAD------VPAGHVAVCVGT---GCRR 67
           C  +R + +L+   Q L+Q +R ++   +  IP D      VP GH+A+ VG     C R
Sbjct: 38  CMLMRPLAKLKSWGQRLKQSFRRRSTRRSAYIPVDHKKADPVPRGHLAIYVGQKDGDCHR 97

Query: 68  FVVRATYLNHPVFKKLLVQAEEEYGFSNQGPLAIPCDESVFEEVLRFISRSES 108
            +V   Y NHP+F +LL +AE+EYGF ++G + IPC  S FE V   I+   S
Sbjct: 98  VLVPIVYFNHPLFGELLREAEKEYGFCHEGGITIPCLYSDFERVKTRIASGSS 150

[Close]

BLAST of Sed0016823 vs. ExPASy TrEMBL
Match: A0A0A0LDJ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G866530 PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.1e-82
Identity = 153/181 (84.53%), Postives = 161/181 (88.95%), Query Frame = 0


Query: 1   MSAGIGKCSKIRHIVRLRQMLRQWRNKARMSANRIPADVPAGHVAVCVGTGCRRFVVRAT 60
           MSAG+GKCSKIRHIVRLRQMLR+WRNKARMSANRIP+DVPAGHVAVCVGT  RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFSNQGPLAIPCDESVFEEVLRFISRSESPNSGRFMKFDDFQ 120
           YLNHPVFKKLLVQAEEEYGF+NQGPLAIPCDESVFEEV+RFISRSESPNSGRF+K DDFQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKN------LWRWQNGWRDHSTVVIPSPNRSRGET 176
           SYCHIGIRTGLDLWPESRPLLHGLAEK+      LWRWQ         V+PS NRSRG T
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSICSGECLWRWQKLVEGSIHHVVPSSNRSRGGT 180

[Close]

BLAST of Sed0016823 vs. ExPASy TrEMBL
Match: A0A6J1F8H9 (auxin-induced protein 6B OS=Cucurbita moschata OX=3662 GN=LOC111443278 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 8.2e-78
Identity = 137/150 (91.33%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MSAGIGKCSKIRHIVRLRQMLRQWRNKARMSANRIPADVPAGHVAVCVGTGCRRFVVRAT 60
           MSAG+GKCSKIRHIVRLRQMLR+WRNKARMSANRIP+DVPAGHVAVCVGT CRRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFSNQGPLAIPCDESVFEEVLRFISRSESPNSGRFMKFDDFQ 120
           YLNHPVFKKLLVQAEEEYGF+NQGPLAIPCDESVFEEV+RFISRS+SPNSGRF+K D+FQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120

Query: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKNLW 151
           +YCHIGIRTGLDLWPESRPLLHGLAEK++W
Sbjct: 121 TYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of Sed0016823 vs. ExPASy TrEMBL
Match: A0A5D3E601 (Auxin-induced protein 6B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008210 PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.1e-77
Identity = 138/150 (92.00%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 1   MSAGIGKCSKIRHIVRLRQMLRQWRNKARMSANRIPADVPAGHVAVCVGTGCRRFVVRAT 60
           MSAG+GKCSKIRHIVRLRQMLR+WRNKARMSANRIP+DVPAGHVAVCVGT  RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFSNQGPLAIPCDESVFEEVLRFISRSESPNSGRFMKFDDFQ 120
           YLNHPVFKKLL+QAEEEYGF+NQGPLAIPCDESVFEEV+RFISRSESPNSGRF+K DDFQ
Sbjct: 61  YLNHPVFKKLLIQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKNLW 151
           SYCHIGIRTGLDLWPESRPLLHGLAEK++W
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of Sed0016823 vs. ExPASy TrEMBL
Match: A0A1S3CRK3 (auxin-induced protein 6B OS=Cucumis melo OX=3656 GN=LOC103503890 PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.1e-77
Identity = 138/150 (92.00%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 1   MSAGIGKCSKIRHIVRLRQMLRQWRNKARMSANRIPADVPAGHVAVCVGTGCRRFVVRAT 60
           MSAG+GKCSKIRHIVRLRQMLR+WRNKARMSANRIP+DVPAGHVAVCVGT  RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFSNQGPLAIPCDESVFEEVLRFISRSESPNSGRFMKFDDFQ 120
           YLNHPVFKKLL+QAEEEYGF+NQGPLAIPCDESVFEEV+RFISRSESPNSGRF+K DDFQ
Sbjct: 61  YLNHPVFKKLLIQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKNLW 151
           SYCHIGIRTGLDLWPESRPLLHGLAEK++W
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of Sed0016823 vs. ExPASy TrEMBL
Match: A0A6J1IP24 (auxin-induced protein 6B OS=Cucurbita maxima OX=3661 GN=LOC111476970 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 9.0e-77
Identity = 135/150 (90.00%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 1   MSAGIGKCSKIRHIVRLRQMLRQWRNKARMSANRIPADVPAGHVAVCVGTGCRRFVVRAT 60
           MSAG+GKCSKIRHIVRLRQMLR+WRNKARMSANRIP+DVPAGHVAVCVGT CRRFVVRA 
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAA 60

Query: 61  YLNHPVFKKLLVQAEEEYGFSNQGPLAIPCDESVFEEVLRFISRSESPNSGRFMKFDDFQ 120
           YLNHPVFKKLLVQAEEEYGF+NQGPLAIPCDESVFEEV+RFISRS+SPNSGRF+K D+FQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120

Query: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKNLW 151
           ++CHIGIRTGLDLWPESRPLLHGLAEK++W
Sbjct: 121 TFCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of Sed0016823 vs. TAIR 10
Match: AT1G75590.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 227.3 bits (578), Expect = 9.9e-60
Identity = 109/154 (70.78%), Postives = 129/154 (83.77%), Query Frame = 0


Query: 1   MSAGIGKCSKIRHIVRLRQMLRQWRNKARMSAN---RIPADVPAGHVAVCVGTGCRRFVV 60
           M+ G+GKCSKIRHIVRLRQMLR+WR++ARMS++    +P+DVP+GHVAV VG+ CRRFVV
Sbjct: 1   MAGGLGKCSKIRHIVRLRQMLRRWRDQARMSSSFSRCVPSDVPSGHVAVYVGSSCRRFVV 60

Query: 61  RATYLNHPVFKKLLVQAEEEYGFSNQGPLAIPCDESVFEEVLRFISRSESPNSGRFMKFD 120
           RATYLNHPV + LLVQAEEE+GF NQGPL IPC+ESVFEE +RFISRS+S  S RF   D
Sbjct: 61  RATYLNHPVLRNLLVQAEEEFGFVNQGPLVIPCEESVFEESIRFISRSDSTRSRRFTCPD 120

Query: 121 DFQSYCH-IGIRTGLDLWPESRPLLHGLAEKNLW 151
           DFQ  CH +GIR+ LDLW ESRPLLHG+ EK +W
Sbjct: 121 DFQKNCHVVGIRSKLDLWIESRPLLHGVTEKAVW 154

[Close]

BLAST of Sed0016823 vs. TAIR 10
Match: AT1G19840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 214.5 bits (545), Expect = 6.6e-56
Identity = 105/154 (68.18%), Postives = 126/154 (81.82%), Query Frame = 0


Query: 1   MSAGIGKCSKIRHIVRLRQMLRQWRNKARMS--ANRIPADVPAGHVAVCVGTGCRRFVVR 60
           M+  + KCSKIRHIVRLRQMLR+WRNKAR+S  +  +P+DVP+GHVAVCVG+GCRRFVVR
Sbjct: 1   MAGSLVKCSKIRHIVRLRQMLRRWRNKARLSSVSRCVPSDVPSGHVAVCVGSGCRRFVVR 60

Query: 61  ATYLNHPVFKKLLVQAEEEYGFSNQGPLAIPCDESVFEEVLRFISRSESPNSGRFMKFDD 120
           A+YLNHP+   LLVQAEEE+GF+NQGPL IPC+ESVFEE +RFISRS+S  S RF   DD
Sbjct: 61  ASYLNHPIISNLLVQAEEEFGFANQGPLVIPCEESVFEEAIRFISRSDSSRSSRFTCPDD 120

Query: 121 FQSYCH--IGIRTGLDLWPESRPLLHGLAEKNLW 151
            Q  C+  I I++ LDL  ESRPLLHG+AEK +W
Sbjct: 121 LQK-CNGGIKIKSKLDLMIESRPLLHGVAEKAIW 153

[Close]

BLAST of Sed0016823 vs. TAIR 10
Match: AT5G10990.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 204.5 bits (519), Expect = 6.9e-53
Identity = 102/149 (68.46%), Postives = 119/149 (79.87%), Query Frame = 0


Query: 1   MSAGIGKCSKIRHIVRLRQMLRQWRNKARMSANR--IPADVPAGHVAVCVGTGCRRFVVR 60
           M+ GIGKCSKIRHIV+LRQMLRQWRNKARMS+ R  +P+DVP+GHVAV VG  CRRFVV 
Sbjct: 1   MAGGIGKCSKIRHIVKLRQMLRQWRNKARMSSVRRSVPSDVPSGHVAVYVGRSCRRFVVL 60

Query: 61  ATYLNHPVFKKLLVQAEEEYGFSNQGPLAIPCDESVFEEVLRFISRSESPNSGRFMKFDD 120
           ATYLNHP+   LLV+AEEE+GF+NQGPL IPC+ESVFEE +RFI+R     S RF   DD
Sbjct: 61  ATYLNHPILMNLLVKAEEEFGFANQGPLVIPCEESVFEESIRFITR-----SSRFTCTDD 120

Query: 121 FQSYCHIGIRTGLDLWPESRPLLHGLAEK 148
            +   H GIR+ LDL  ESRPLLHG++EK
Sbjct: 121 LKKNRHGGIRSKLDLLMESRPLLHGVSEK 144

[Close]

BLAST of Sed0016823 vs. TAIR 10
Match: AT4G34750.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-36
Identity = 79/152 (51.97%), Postives = 109/152 (71.71%), Query Frame = 0


Query: 5   IGKCSKIRHIVRLRQMLRQWRNKARM-SANRIP-ADVPAGHVAVCVGTGCRRFVVRATYL 64
           +GK +KI  +VR+RQML+QW+ KA + S+N  P +DVP GHVAV VG   RR+VVRA +L
Sbjct: 1   MGKNNKIGSVVRIRQMLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHL 60

Query: 65  NHPVFKKLLVQAEEEYGFSNQGPLAIPCDESVFEEVLRFISRSE-SPNSGR----FMKFD 124
           NHP+F++LL +AEEEYGF+N GPLAIPCDES+FE+++  ++R E S +SGR        +
Sbjct: 61  NHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAATLE 120

Query: 125 DFQSYCHIGIRTGLDLWPESRPLLHGLAEKNL 150
           D +   H+G+        ESRPLL G+AEK++
Sbjct: 121 DLRRCSHVGLAKNN---VESRPLLPGIAEKSV 149

[Close]

BLAST of Sed0016823 vs. TAIR 10
Match: AT4G34750.2 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-36
Identity = 79/152 (51.97%), Postives = 109/152 (71.71%), Query Frame = 0


Query: 5   IGKCSKIRHIVRLRQMLRQWRNKARM-SANRIP-ADVPAGHVAVCVGTGCRRFVVRATYL 64
           +GK +KI  +VR+RQML+QW+ KA + S+N  P +DVP GHVAV VG   RR+VVRA +L
Sbjct: 1   MGKNNKIGSVVRIRQMLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHL 60

Query: 65  NHPVFKKLLVQAEEEYGFSNQGPLAIPCDESVFEEVLRFISRSE-SPNSGR----FMKFD 124
           NHP+F++LL +AEEEYGF+N GPLAIPCDES+FE+++  ++R E S +SGR        +
Sbjct: 61  NHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAATLE 120

Query: 125 DFQSYCHIGIRTGLDLWPESRPLLHGLAEKNL 150
           D +   H+G+        ESRPLL G+AEK++
Sbjct: 121 DLRRCSHVGLAKNN---VESRPLLPGIAEKSV 149

The following BLAST results are available for this feature:

BLAST of Sed0016823 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60020.1	2.3e-82	84.53	hypothetical protein Csa_001829 [Cucumis sativus]	[more]
XP_038899268.1	4.4e-78	92.00	auxin-induced protein 6B-like [Benincasa hispida]	[more]
XP_023535898.1	1.3e-77	91.33	auxin-induced protein 6B [Cucurbita pepo subsp. pepo]	[more]
XP_011652445.1	1.7e-77	92.67	auxin-induced protein 6B [Cucumis sativus]	[more]
XP_022936801.1	1.7e-77	91.33	auxin-induced protein 6B [Cucurbita moschata] >KAG6591279.1 Auxin-responsive pro...	[more]

BLAST of Sed0016823 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	1.2e-12	38.61	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
Q9SGU2	1.5e-12	47.50	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S...	[more]
P33083	5.7e-12	46.91	Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1	[more]
O64538	2.9e-11	50.77	Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S...	[more]
O22150	3.7e-11	38.05	Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 S...	[more]

BLAST of Sed0016823 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDJ7	1.1e-82	84.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G866530 PE=3 SV=1	[more]
A0A6J1F8H9	8.2e-78	91.33	auxin-induced protein 6B OS=Cucurbita moschata OX=3662 GN=LOC111443278 PE=3 SV=1	[more]
A0A5D3E601	1.1e-77	92.00	Auxin-induced protein 6B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CRK3	1.1e-77	92.00	auxin-induced protein 6B OS=Cucumis melo OX=3656 GN=LOC103503890 PE=3 SV=1	[more]
A0A6J1IP24	9.0e-77	90.00	auxin-induced protein 6B OS=Cucurbita maxima OX=3661 GN=LOC111476970 PE=3 SV=1	[more]

BLAST of Sed0016823 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75590.1	9.9e-60	70.78	SAUR-like auxin-responsive protein family	[more]
AT1G19840.1	6.6e-56	68.18	SAUR-like auxin-responsive protein family	[more]
AT5G10990.1	6.9e-53	68.46	SAUR-like auxin-responsive protein family	[more]
AT4G34750.1	1.2e-36	51.97	SAUR-like auxin-responsive protein family	[more]
AT4G34750.2	1.2e-36	51.97	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 16..101 e-value: 1.2E-29 score: 102.3
None	No IPR available	PANTHER	PTHR31374:SF183	SMALL AUXIN-UP RNA-RELATED	coord: 6..144
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 6..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016823.1	Sed0016823.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin