Sed0016812 (gene) Chayote v1

Overview
NameSed0016812
Typegene
OrganismSechium edule (Chayote v1)
Descriptionpathogen-associated molecular patterns-induced protein A70
LocationLG07: 5865212 .. 5865463 (-)
RNA-Seq ExpressionSed0016812
SyntenySed0016812
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAGAGCTCTGAAAGCCCAGGGTTTTCTGCCGGCGGTGAGTACAACCTGCAGCCACCGCCGCCGCTGCCGTTACTTAGCCGGAGCGGCGCTCAGAGGAGGAAGTTGGAGAGGACAGTGACGGTAACGGTGACGGCGGACGTTGATGAAAGTGCTGAAGCTTTTATTAAGAAGTTCAGAAATCAATTACTGATTCAGAGGCTTCAATCCATTGAGAATTATGAGAAAATACTAGCCGGACAAAATTAA

mRNA sequence

ATGAAGAAGAGCTCTGAAAGCCCAGGGTTTTCTGCCGGCGGTGAGTACAACCTGCAGCCACCGCCGCCGCTGCCGTTACTTAGCCGGAGCGGCGCTCAGAGGAGGAAGTTGGAGAGGACAGTGACGGTAACGGTGACGGCGGACGTTGATGAAAGTGCTGAAGCTTTTATTAAGAAGTTCAGAAATCAATTACTGATTCAGAGGCTTCAATCCATTGAGAATTATGAGAAAATACTAGCCGGACAAAATTAA

Coding sequence (CDS)

ATGAAGAAGAGCTCTGAAAGCCCAGGGTTTTCTGCCGGCGGTGAGTACAACCTGCAGCCACCGCCGCCGCTGCCGTTACTTAGCCGGAGCGGCGCTCAGAGGAGGAAGTTGGAGAGGACAGTGACGGTAACGGTGACGGCGGACGTTGATGAAAGTGCTGAAGCTTTTATTAAGAAGTTCAGAAATCAATTACTGATTCAGAGGCTTCAATCCATTGAGAATTATGAGAAAATACTAGCCGGACAAAATTAA

Protein sequence

MKKSSESPGFSAGGEYNLQPPPPLPLLSRSGAQRRKLERTVTVTVTADVDESAEAFIKKFRNQLLIQRLQSIENYEKILAGQN
Homology
BLAST of Sed0016812 vs. NCBI nr
Match: KAA0058765.1 (DUF761 domain-containing protein [Cucumis melo var. makuwa] >TYK10559.1 DUF761 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 111.3 bits (277), Expect = 4.0e-21
Identity = 65/85 (76.47%), Postives = 68/85 (80.00%), Query Frame = 0

Query: 1  MKKSSESPGFS--AGGEYNLQPPP-PLPLLSRSGAQRRKLERTVTVTVTADVDESAEAFI 60
          MKKSSE P  S  AGG   LQPPP P   L   G +RRKLERTVTVTVT DVDESAEAFI
Sbjct: 1  MKKSSELPTVSAAAGGINKLQPPPSPSSPLRGCGGERRKLERTVTVTVTEDVDESAEAFI 60

Query: 61 KKFRNQLLIQRLQSIENYEKILAGQ 83
          KKFRNQLLIQRLQSIENYE+ILAG+
Sbjct: 61 KKFRNQLLIQRLQSIENYERILAGE 85

BLAST of Sed0016812 vs. NCBI nr
Match: KGN45285.1 (hypothetical protein Csa_016012 [Cucumis sativus])

HSP 1 Score: 100.9 bits (250), Expect = 5.4e-18
Identity = 61/84 (72.62%), Postives = 66/84 (78.57%), Query Frame = 0

Query: 1   MKKSSESPGFSAGGEYN-LQPPP-PLPLLSRSGAQRRKLERTVTVTVTADVDESAEAFIK 60
           MKK+SE P  SA G  N LQPPP P   L   G +RRKLER  TVTVT DV+ESAEAFI+
Sbjct: 19  MKKNSELPAVSAAGGINKLQPPPCPSSPLRFCGGERRKLER--TVTVTEDVNESAEAFIQ 78

Query: 61  KFRNQLLIQRLQSIENYEKILAGQ 83
           KFRNQLLIQRLQSIENYEKILAG+
Sbjct: 79  KFRNQLLIQRLQSIENYEKILAGE 100

BLAST of Sed0016812 vs. NCBI nr
Match: KAG6575588.1 (hypothetical protein SDJN03_26227, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014129.1 hypothetical protein SDJN02_24302, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 85.5 bits (210), Expect = 2.4e-13
Identity = 52/87 (59.77%), Postives = 62/87 (71.26%), Query Frame = 0

Query: 1  MKKSSESP---GFSAGGEYNLQPPPPLPLLSRSGAQRRKLER--TVTVTVTADVDESAEA 60
          MK +S+ P     +A G    Q PPP P       +R K+E+  TVTV+VT DV+ESAEA
Sbjct: 1  MKNTSQPPFSAAAAAAGSCKQQQPPPPP-----RQERTKMEKTPTVTVSVTEDVNESAEA 60

Query: 61 FIKKFRNQLLIQRLQSIENYEKILAGQ 83
          FIK+FRNQLLIQRLQSIENYEKILAG+
Sbjct: 61 FIKRFRNQLLIQRLQSIENYEKILAGE 82

BLAST of Sed0016812 vs. NCBI nr
Match: MBA0695777.1 (hypothetical protein [Gossypium aridum])

HSP 1 Score: 62.8 bits (151), Expect = 1.6e-06
Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = 0

Query: 28 SRSGAQRRKLERTVTVTVTADVDESAEAFIKKFRNQLLIQRLQSIENYEKILA 81
          S +GA   KLE+  +V    D++ESAEAFI+KFR+QLL+QRL+SIENYEK+LA
Sbjct: 40 SAAGAATNKLEKKASV----DINESAEAFIQKFRHQLLLQRLESIENYEKMLA 88

BLAST of Sed0016812 vs. NCBI nr
Match: KAB2611398.1 (hypothetical protein D8674_019430 [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 62.4 bits (150), Expect = 2.1e-06
Identity = 35/58 (60.34%), Postives = 41/58 (70.69%), Query Frame = 0

Query: 28 SRSGAQRRKLERTVTVTV----TADVDESAEAFIKKFRNQLLIQRLQSIENYEKILAG 82
          SRS A     E T    +    T D++ESAEAFIKKFR QLLIQRL+SIENYE++LAG
Sbjct: 36 SRSHAMANNKEETAPKKLERKSTEDINESAEAFIKKFRKQLLIQRLESIENYEQMLAG 93

BLAST of Sed0016812 vs. ExPASy TrEMBL
Match: A0A5D3CK25 (DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002120 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.9e-21
Identity = 65/85 (76.47%), Postives = 68/85 (80.00%), Query Frame = 0

Query: 1  MKKSSESPGFS--AGGEYNLQPPP-PLPLLSRSGAQRRKLERTVTVTVTADVDESAEAFI 60
          MKKSSE P  S  AGG   LQPPP P   L   G +RRKLERTVTVTVT DVDESAEAFI
Sbjct: 1  MKKSSELPTVSAAAGGINKLQPPPSPSSPLRGCGGERRKLERTVTVTVTEDVDESAEAFI 60

Query: 61 KKFRNQLLIQRLQSIENYEKILAGQ 83
          KKFRNQLLIQRLQSIENYE+ILAG+
Sbjct: 61 KKFRNQLLIQRLQSIENYERILAGE 85

BLAST of Sed0016812 vs. ExPASy TrEMBL
Match: A0A0A0K6D1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433160 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.6e-18
Identity = 61/84 (72.62%), Postives = 66/84 (78.57%), Query Frame = 0

Query: 1   MKKSSESPGFSAGGEYN-LQPPP-PLPLLSRSGAQRRKLERTVTVTVTADVDESAEAFIK 60
           MKK+SE P  SA G  N LQPPP P   L   G +RRKLER  TVTVT DV+ESAEAFI+
Sbjct: 19  MKKNSELPAVSAAGGINKLQPPPCPSSPLRFCGGERRKLER--TVTVTEDVNESAEAFIQ 78

Query: 61  KFRNQLLIQRLQSIENYEKILAGQ 83
           KFRNQLLIQRLQSIENYEKILAG+
Sbjct: 79  KFRNQLLIQRLQSIENYEKILAGE 100

BLAST of Sed0016812 vs. ExPASy TrEMBL
Match: A0A7J8Y8A3 (Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_002377 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.9e-07
Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = 0

Query: 28 SRSGAQRRKLERTVTVTVTADVDESAEAFIKKFRNQLLIQRLQSIENYEKILA 81
          S +GA   KLE+  +V    D++ESAEAFI+KFR+QLL+QRL+SIENYEK+LA
Sbjct: 40 SAAGAATNKLEKKASV----DINESAEAFIQKFRHQLLLQRLESIENYEKMLA 88

BLAST of Sed0016812 vs. ExPASy TrEMBL
Match: A0A1U8KA30 (uncharacterized protein LOC107914815 OS=Gossypium hirsutum OX=3635 GN=LOC107914815 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06
Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = 0

Query: 28  SRSGAQRRKLERTVTVTVTADVDESAEAFIKKFRNQLLIQRLQSIENYEKILA 81
           S +GA   KLE+  +V    D++ESAEAFI+KFR+QLL+QRL+SIENYEK+LA
Sbjct: 60  SAAGAATNKLEKNPSV----DINESAEAFIQKFRHQLLLQRLESIENYEKMLA 108

BLAST of Sed0016812 vs. ExPASy TrEMBL
Match: A0A5N5G7Z8 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_019430 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06
Identity = 35/58 (60.34%), Postives = 41/58 (70.69%), Query Frame = 0

Query: 28 SRSGAQRRKLERTVTVTV----TADVDESAEAFIKKFRNQLLIQRLQSIENYEKILAG 82
          SRS A     E T    +    T D++ESAEAFIKKFR QLLIQRL+SIENYE++LAG
Sbjct: 36 SRSHAMANNKEETAPKKLERKSTEDINESAEAFIKKFRKQLLIQRLESIENYEQMLAG 93

BLAST of Sed0016812 vs. TAIR 10
Match: AT1G15385.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); Has 6 Blast hits to 6 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 1.3e-06
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0

Query: 35 RKLERTVTVTVTADVDESAEAFIKKFRNQLLIQRLQSIEN 75
          +K+ER  ++    DVD+SAEAFI KFRNQLL+QRL+SIEN
Sbjct: 32 KKVERKASM----DVDKSAEAFITKFRNQLLLQRLESIEN 67

BLAST of Sed0016812 vs. TAIR 10
Match: AT5G56980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 4.8e-04
Identity = 28/79 (35.44%), Postives = 41/79 (51.90%), Query Frame = 0

Query: 2   KKSSESPGFSAGGEYNLQPPPPLPLLSRSGAQRRKLERTVTVTVTAD-VDESAEAFIKKF 61
           K +SE  GF   G +  + P  +  L R      ++ER+ +     D VD  A  FI KF
Sbjct: 299 KSASEKSGFGFAGSH-AEAPETVESLERRRPDTTRVERSTSFGDGEDGVDAKASDFINKF 358

Query: 62  RNQLLIQRLQSIENYEKIL 80
           + QL +QRL SI  Y+++L
Sbjct: 359 KQQLKLQRLDSILRYKEML 376

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0058765.14.0e-2176.47DUF761 domain-containing protein [Cucumis melo var. makuwa] >TYK10559.1 DUF761 d... [more]
KGN45285.15.4e-1872.62hypothetical protein Csa_016012 [Cucumis sativus][more]
KAG6575588.12.4e-1359.77hypothetical protein SDJN03_26227, partial [Cucurbita argyrosperma subsp. sorori... [more]
MBA0695777.11.6e-0662.26hypothetical protein [Gossypium aridum][more]
KAB2611398.12.1e-0660.34hypothetical protein D8674_019430 [Pyrus ussuriensis x Pyrus communis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CK251.9e-2176.47DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A0A0K6D12.6e-1872.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433160 PE=4 SV=1[more]
A0A7J8Y8A37.9e-0762.26Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_002377 PE=4 SV=1[more]
A0A1U8KA301.0e-0662.26uncharacterized protein LOC107914815 OS=Gossypium hirsutum OX=3635 GN=LOC1079148... [more]
A0A5N5G7Z81.0e-0660.34Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867... [more]
Match NameE-valueIdentityDescription
AT1G15385.11.3e-0665.00unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761,... [more]
AT5G56980.14.8e-0435.44unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 48..80
e-value: 4.7E-14
score: 51.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availablePANTHERPTHR33098:SF82DUF761 DOMAIN PROTEINcoord: 29..82
NoneNo IPR availablePANTHERPTHR33098COTTON FIBER (DUF761)coord: 29..82

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0016812.1Sed0016812.1mRNA