Sed0016812 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGAGCTCTGAAAGCCCAGGGTTTTCTGCCGGCGGTGAGTACAACCTGCAGCCACCGCCGCCGCTGCCGTTACTTAGCCGGAGCGGCGCTCAGAGGAGGAAGTTGGAGAGGACAGTGACGGTAACGGTGACGGCGGACGTTGATGAAAGTGCTGAAGCTTTTATTAAGAAGTTCAGAAATCAATTACTGATTCAGAGGCTTCAATCCATTGAGAATTATGAGAAAATACTAGCCGGACAAAATTAA ATGAAGAAGAGCTCTGAAAGCCCAGGGTTTTCTGCCGGCGGTGAGTACAACCTGCAGCCACCGCCGCCGCTGCCGTTACTTAGCCGGAGCGGCGCTCAGAGGAGGAAGTTGGAGAGGACAGTGACGGTAACGGTGACGGCGGACGTTGATGAAAGTGCTGAAGCTTTTATTAAGAAGTTCAGAAATCAATTACTGATTCAGAGGCTTCAATCCATTGAGAATTATGAGAAAATACTAGCCGGACAAAATTAA ATGAAGAAGAGCTCTGAAAGCCCAGGGTTTTCTGCCGGCGGTGAGTACAACCTGCAGCCACCGCCGCCGCTGCCGTTACTTAGCCGGAGCGGCGCTCAGAGGAGGAAGTTGGAGAGGACAGTGACGGTAACGGTGACGGCGGACGTTGATGAAAGTGCTGAAGCTTTTATTAAGAAGTTCAGAAATCAATTACTGATTCAGAGGCTTCAATCCATTGAGAATTATGAGAAAATACTAGCCGGACAAAATTAA MKKSSESPGFSAGGEYNLQPPPPLPLLSRSGAQRRKLERTVTVTVTADVDESAEAFIKKFRNQLLIQRLQSIENYEKILAGQN Homology
BLAST of Sed0016812 vs. NCBI nr
Match: KAA0058765.1 (DUF761 domain-containing protein [Cucumis melo var. makuwa] >TYK10559.1 DUF761 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 111.3 bits (277), Expect = 4.0e-21 Identity = 65/85 (76.47%), Postives = 68/85 (80.00%), Query Frame = 0
BLAST of Sed0016812 vs. NCBI nr
Match: KGN45285.1 (hypothetical protein Csa_016012 [Cucumis sativus]) HSP 1 Score: 100.9 bits (250), Expect = 5.4e-18 Identity = 61/84 (72.62%), Postives = 66/84 (78.57%), Query Frame = 0
BLAST of Sed0016812 vs. NCBI nr
Match: KAG6575588.1 (hypothetical protein SDJN03_26227, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014129.1 hypothetical protein SDJN02_24302, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 85.5 bits (210), Expect = 2.4e-13 Identity = 52/87 (59.77%), Postives = 62/87 (71.26%), Query Frame = 0
BLAST of Sed0016812 vs. NCBI nr
Match: MBA0695777.1 (hypothetical protein [Gossypium aridum]) HSP 1 Score: 62.8 bits (151), Expect = 1.6e-06 Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = 0
BLAST of Sed0016812 vs. NCBI nr
Match: KAB2611398.1 (hypothetical protein D8674_019430 [Pyrus ussuriensis x Pyrus communis]) HSP 1 Score: 62.4 bits (150), Expect = 2.1e-06 Identity = 35/58 (60.34%), Postives = 41/58 (70.69%), Query Frame = 0
BLAST of Sed0016812 vs. ExPASy TrEMBL
Match: A0A5D3CK25 (DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002120 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.9e-21 Identity = 65/85 (76.47%), Postives = 68/85 (80.00%), Query Frame = 0
BLAST of Sed0016812 vs. ExPASy TrEMBL
Match: A0A0A0K6D1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433160 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 2.6e-18 Identity = 61/84 (72.62%), Postives = 66/84 (78.57%), Query Frame = 0
BLAST of Sed0016812 vs. ExPASy TrEMBL
Match: A0A7J8Y8A3 (Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_002377 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 7.9e-07 Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = 0
BLAST of Sed0016812 vs. ExPASy TrEMBL
Match: A0A1U8KA30 (uncharacterized protein LOC107914815 OS=Gossypium hirsutum OX=3635 GN=LOC107914815 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06 Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = 0
BLAST of Sed0016812 vs. ExPASy TrEMBL
Match: A0A5N5G7Z8 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_019430 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06 Identity = 35/58 (60.34%), Postives = 41/58 (70.69%), Query Frame = 0
BLAST of Sed0016812 vs. TAIR 10
Match: AT1G15385.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); Has 6 Blast hits to 6 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 49.7 bits (117), Expect = 1.3e-06 Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0
BLAST of Sed0016812 vs. TAIR 10
Match: AT5G56980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 41.2 bits (95), Expect = 4.8e-04 Identity = 28/79 (35.44%), Postives = 41/79 (51.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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