Sed0016768 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATTTGTGAAACAGGGGAGCTGGGACAGTTCGGGCGACGAATGCGAGCCGCGGGATCCAACCAAACGGCCCTACGAGTGCACATTTTGCAAGCGCGGGTTCACCAACGCTCAAGCCCTTGGTGGCCACATGAACATCCACCGCAAGGACAGAGCCAAAGCCAAACACCCCCCCAATTTTGTTCCTTCCTCTTCTTCTCAATATTCCAACGGCCACCAAATTTACCCCAATGCTCCAACCCAACCCCCCGCCGTCTACTACCCCCCGCCCCCGCCTTCTTATCGAATGTACTTCGACACCGCGGCCGACATGGCGGGGAACTTTCCGGTTCACGGGCAGAGACTGCAGAATGTGAATGAAGAGCTGCTTGGGGCGAATCTTAGCCTGCAAGTTCATCAAAGTAGGGGTGTTTGGAATCATGAAGAAGTCGATTTGGAGCTGCGATTAGGCCATGAATATCGCTGA ATGGAATTTGTGAAACAGGGGAGCTGGGACAGTTCGGGCGACGAATGCGAGCCGCGGGATCCAACCAAACGGCCCTACGAGTGCACATTTTGCAAGCGCGGGTTCACCAACGCTCAAGCCCTTGGTGGCCACATGAACATCCACCGCAAGGACAGAGCCAAAGCCAAACACCCCCCCAATTTTGTTCCTTCCTCTTCTTCTCAATATTCCAACGGCCACCAAATTTACCCCAATGCTCCAACCCAACCCCCCGCCGTCTACTACCCCCCGCCCCCGCCTTCTTATCGAATGTACTTCGACACCGCGGCCGACATGGCGGGGAACTTTCCGGTTCACGGGCAGAGACTGCAGAATGTGAATGAAGAGCTGCTTGGGGCGAATCTTAGCCTGCAAGTTCATCAAAGTAGGGGTGTTTGGAATCATGAAGAAGTCGATTTGGAGCTGCGATTAGGCCATGAATATCGCTGA ATGGAATTTGTGAAACAGGGGAGCTGGGACAGTTCGGGCGACGAATGCGAGCCGCGGGATCCAACCAAACGGCCCTACGAGTGCACATTTTGCAAGCGCGGGTTCACCAACGCTCAAGCCCTTGGTGGCCACATGAACATCCACCGCAAGGACAGAGCCAAAGCCAAACACCCCCCCAATTTTGTTCCTTCCTCTTCTTCTCAATATTCCAACGGCCACCAAATTTACCCCAATGCTCCAACCCAACCCCCCGCCGTCTACTACCCCCCGCCCCCGCCTTCTTATCGAATGTACTTCGACACCGCGGCCGACATGGCGGGGAACTTTCCGGTTCACGGGCAGAGACTGCAGAATGTGAATGAAGAGCTGCTTGGGGCGAATCTTAGCCTGCAAGTTCATCAAAGTAGGGGTGTTTGGAATCATGAAGAAGTCGATTTGGAGCTGCGATTAGGCCATGAATATCGCTGA MEFVKQGSWDSSGDECEPRDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHPPNFVPSSSSQYSNGHQIYPNAPTQPPAVYYPPPPPSYRMYFDTAADMAGNFPVHGQRLQNVNEELLGANLSLQVHQSRGVWNHEEVDLELRLGHEYR Homology
BLAST of Sed0016768 vs. NCBI nr
Match: XP_008439363.1 (PREDICTED: zinc finger protein 7 [Cucumis melo]) HSP 1 Score: 218.4 bits (555), Expect = 4.4e-53 Identity = 118/173 (68.21%), Postives = 131/173 (75.72%), Query Frame = 0
BLAST of Sed0016768 vs. NCBI nr
Match: XP_038877191.1 (zinc finger protein 7-like [Benincasa hispida]) HSP 1 Score: 214.5 bits (545), Expect = 6.3e-52 Identity = 115/170 (67.65%), Postives = 129/170 (75.88%), Query Frame = 0
BLAST of Sed0016768 vs. NCBI nr
Match: XP_022151484.1 (zinc finger protein 8-like [Momordica charantia]) HSP 1 Score: 206.1 bits (523), Expect = 2.2e-49 Identity = 109/169 (64.50%), Postives = 123/169 (72.78%), Query Frame = 0
BLAST of Sed0016768 vs. NCBI nr
Match: KAE8650335.1 (hypothetical protein Csa_010297 [Cucumis sativus]) HSP 1 Score: 206.1 bits (523), Expect = 2.2e-49 Identity = 115/173 (66.47%), Postives = 128/173 (73.99%), Query Frame = 0
BLAST of Sed0016768 vs. NCBI nr
Match: XP_004134420.3 (zinc finger protein 10 [Cucumis sativus]) HSP 1 Score: 206.1 bits (523), Expect = 2.2e-49 Identity = 115/173 (66.47%), Postives = 128/173 (73.99%), Query Frame = 0
BLAST of Sed0016768 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.6e-08 Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 0
BLAST of Sed0016768 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 4.4e-08 Identity = 34/84 (40.48%), Postives = 43/84 (51.19%), Query Frame = 0
BLAST of Sed0016768 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 9.9e-08 Identity = 32/76 (42.11%), Postives = 44/76 (57.89%), Query Frame = 0
BLAST of Sed0016768 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.3e-07 Identity = 30/65 (46.15%), Postives = 36/65 (55.38%), Query Frame = 0
BLAST of Sed0016768 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2) HSP 1 Score: 57.4 bits (137), Expect = 1.7e-07 Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 0
BLAST of Sed0016768 vs. ExPASy TrEMBL
Match: A0A1S3AZA2 (zinc finger protein 7 OS=Cucumis melo OX=3656 GN=LOC103484178 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 2.1e-53 Identity = 118/173 (68.21%), Postives = 131/173 (75.72%), Query Frame = 0
BLAST of Sed0016768 vs. ExPASy TrEMBL
Match: A0A6J1DD81 (zinc finger protein 8-like OS=Momordica charantia OX=3673 GN=LOC111019412 PE=4 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 1.1e-49 Identity = 109/169 (64.50%), Postives = 123/169 (72.78%), Query Frame = 0
BLAST of Sed0016768 vs. ExPASy TrEMBL
Match: A0A6J1IGJ1 (zinc finger protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111474605 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 5.4e-49 Identity = 113/164 (68.90%), Postives = 124/164 (75.61%), Query Frame = 0
BLAST of Sed0016768 vs. ExPASy TrEMBL
Match: A0A6J1GCF2 (transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC111452897 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 2.3e-47 Identity = 110/164 (67.07%), Postives = 123/164 (75.00%), Query Frame = 0
BLAST of Sed0016768 vs. ExPASy TrEMBL
Match: A0A6J1IWL0 (zinc finger protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111479150 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 3.9e-47 Identity = 111/177 (62.71%), Postives = 121/177 (68.36%), Query Frame = 0
BLAST of Sed0016768 vs. TAIR 10
Match: AT5G43540.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 69.7 bits (169), Expect = 2.3e-12 Identity = 48/132 (36.36%), Postives = 60/132 (45.45%), Query Frame = 0
BLAST of Sed0016768 vs. TAIR 10
Match: AT3G53820.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 64.7 bits (156), Expect = 7.5e-11 Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0
BLAST of Sed0016768 vs. TAIR 10
Match: AT3G23140.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 61.6 bits (148), Expect = 6.3e-10 Identity = 48/150 (32.00%), Postives = 70/150 (46.67%), Query Frame = 0
BLAST of Sed0016768 vs. TAIR 10
Match: AT3G09290.1 (telomerase activator1 ) HSP 1 Score: 60.1 bits (144), Expect = 1.8e-09 Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 0
BLAST of Sed0016768 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 59.3 bits (142), Expect = 3.1e-09 Identity = 34/84 (40.48%), Postives = 43/84 (51.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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