Sed0016757 (gene) Chayote v1

Overview


Name	Sed0016757
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Thioredoxin
Location	LG01: 18889181 .. 18890657 (+)
RNA-Seq Expression	Sed0016757
Synteny	Sed0016757

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCATTTCCATCGCTAATTAGGTTCAGATTCTTGAAATGATTCCATTTTCATACCCGCCGTTAATGGAGTTTGCCAGTTCGCACGCTCATCTCCTGGCCTTCTTCAACTATAAATTCAGCCATTCAGCTTTGTATTCATTCAATTTCATAAAAAGCACAACGATCTAACAGAAATAACCACTTTTCTTTACTTGCTATCGAGATCGAAAATGGCGGCAAAGAGCGAAGTGATTGCGTGCCGTACCGTTGGATCGTGGAAGCAGCAGCTTCTCAGAGGAAAACAGTCTCATAAACTGGTACGTATTGATCCCAAATCTGTTAGGTTTGTGTGTGTGTGTGTGTGTTTTTTTCTGTTTCTGAACAGGTTTTGATTGTGCAGATTGTCGTGGATTTCACAGCCACGTGGTGCGGTCCGTGCCGTGCTATCGCTCCGGTTGTTGCAGATTTGGCTAAGAAGATGAGTAATGTTGTATTCTTGAAGGTCGATGTTGACGAATTGATTGTGAGTTCATTCAAGCCCTGTAAAACTTTTACATTGTTAATTGAGCGAAATATGGATAAATTATGATTTTGTACCTATGATTTGAGGAGAGTCTAAACTTAGTTCATCTCCGTTTAAAAGCTTGAATTTAGGCCGGTTTAAAGTTAGAATTTAGATCATATAATTGTAAGAACTAGAGTCTAGAATTAATGTTGTTTGATAAAATCTAAAAAATAGTCTTTTATCATTTGTATTAGTTGATGAATTATACGTAATTATTCACGTGTCAATAATGGTGGTACAAGTTACGTGTCTGATTAAATAGTTGCTCCTACTTATTTAGGTCACTCGCATTTACATATGACATGAACTATTTTTTTAGGTTTGATCAAACTATAGACACTAAATTATAACTTTCTCCGAACCCTATCACTAAATTGACTAAATTCTATCTTTCTTTAAATCATAAGGAGGGACAAAATCTATAATTTACCCTTTTAATTTTTTTTATATATATTTGTGAATCGTGAGTGTCTGGATTAACTTATACACATTTCAACTATTCTCGTACAACATTTGAATGCGAAGGATGATAATCTTAAAAGTAAAAGTGCTAACCATTGAATTATTTTGTGCAGAGTGTTGGTGCAGAATGGGGAGTGAGTTCACTCCCTTGCTTCATGTTCTTGAAGAATGGGAAAGTGGTGGAGATGTTTGTAGGTGCAAGAAAAGATGAGCTCCAGAAGATTGTATTAAGACATGCCTAATGGAAAGCTATGATCTGTTCTTTGGATTTCATTCGAACACAAAAAAATTTATGCAACCATTGTGAGTTGCTATAAATTGATTGGTTTTAGTTATAACAACTTTGATATTTCTTGTATTGGATTGTTGTTCAATCCGTTTACTGTTTCCAGGCTATCAAACTTATTATGTAACAAATGAGTATCTATTCTTTTGTTGAATAAAACTGACTACCTATTTAATGTTGCTTAA

mRNA sequence

TGCATTTCCATCGCTAATTAGGTTCAGATTCTTGAAATGATTCCATTTTCATACCCGCCGTTAATGGAGTTTGCCAGTTCGCACGCTCATCTCCTGGCCTTCTTCAACTATAAATTCAGCCATTCAGCTTTGTATTCATTCAATTTCATAAAAAGCACAACGATCTAACAGAAATAACCACTTTTCTTTACTTGCTATCGAGATCGAAAATGGCGGCAAAGAGCGAAGTGATTGCGTGCCGTACCGTTGGATCGTGGAAGCAGCAGCTTCTCAGAGGAAAACAGTCTCATAAACTGATTGTCGTGGATTTCACAGCCACGTGGTGCGGTCCGTGCCGTGCTATCGCTCCGGTTGTTGCAGATTTGGCTAAGAAGATGAGTAATGTTGTATTCTTGAAGGTCGATGTTGACGAATTGATTAGTGTTGGTGCAGAATGGGGAGTGAGTTCACTCCCTTGCTTCATGTTCTTGAAGAATGGGAAAGTGGTGGAGATGTTTGTAGGTGCAAGAAAAGATGAGCTCCAGAAGATTGTATTAAGACATGCCTAATGGAAAGCTATGATCTGTTCTTTGGATTTCATTCGAACACAAAAAAATTTATGCAACCATTGTGAGTTGCTATAAATTGATTGGTTTTAGTTATAACAACTTTGATATTTCTTGTATTGGATTGTTGTTCAATCCGTTTACTGTTTCCAGGCTATCAAACTTATTATGTAACAAATGAGTATCTATTCTTTTGTTGAATAAAACTGACTACCTATTTAATGTTGCTTAA

Coding sequence (CDS)

ATGGCGGCAAAGAGCGAAGTGATTGCGTGCCGTACCGTTGGATCGTGGAAGCAGCAGCTTCTCAGAGGAAAACAGTCTCATAAACTGATTGTCGTGGATTTCACAGCCACGTGGTGCGGTCCGTGCCGTGCTATCGCTCCGGTTGTTGCAGATTTGGCTAAGAAGATGAGTAATGTTGTATTCTTGAAGGTCGATGTTGACGAATTGATTAGTGTTGGTGCAGAATGGGGAGTGAGTTCACTCCCTTGCTTCATGTTCTTGAAGAATGGGAAAGTGGTGGAGATGTTTGTAGGTGCAAGAAAAGATGAGCTCCAGAAGATTGTATTAAGACATGCCTAA

Protein sequence

MAAKSEVIACRTVGSWKQQLLRGKQSHKLIVVDFTATWCGPCRAIAPVVADLAKKMSNVVFLKVDVDELISVGAEWGVSSLPCFMFLKNGKVVEMFVGARKDELQKIVLRHA

Homology

[Close]

BLAST of Sed0016757 vs. NCBI nr
Match: XP_022941032.1 (thioredoxin H1-like [Cucurbita moschata])

HSP 1 Score: 202.2 bits (513), Expect = 2.3e-48
Identity = 95/112 (84.82%), Postives = 107/112 (95.54%), Query Frame = 0


Query: 1   MAAKSEVIACRTVGSWKQQLLRGKQSHKLIVVDFTATWCGPCRAIAPVVADLAKKMSNVV 60
           MA K EVIACRTVGSWKQQLL+GKQS+KLIVVDFTATWCGPCRA+APV A+LAKKMSNV+
Sbjct: 8   MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVI 67

Query: 61  FLKVDVDELISVGAEWGVSSLPCFMFLKNGKVVEMFVGARKDELQKIVLRHA 113
           FLKVDVDEL++V AEWGVS+LPCFMFLKNGKVV+ FVGARKD+LQKIVL++A
Sbjct: 68  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 119

[Close]

BLAST of Sed0016757 vs. NCBI nr
Match: KAG7037881.1 (Thioredoxin H1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 200.3 bits (508), Expect = 8.9e-48
Identity = 94/112 (83.93%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 1   MAAKSEVIACRTVGSWKQQLLRGKQSHKLIVVDFTATWCGPCRAIAPVVADLAKKMSNVV 60
           MA K EVIACRTVGSWKQQLL+GKQS+KLIVVDFTA WCGPCRA+APV A+LAKKMSNV+
Sbjct: 1   MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 60

Query: 61  FLKVDVDELISVGAEWGVSSLPCFMFLKNGKVVEMFVGARKDELQKIVLRHA 113
           FLKVDVDEL++V AEWGVS+LPCFMFLKNGKVV+ FVGARKD+LQKIVL++A
Sbjct: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 112

[Close]

BLAST of Sed0016757 vs. NCBI nr
Match: KAG6608561.1 (Thioredoxin H1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 200.3 bits (508), Expect = 8.9e-48
Identity = 94/112 (83.93%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 1   MAAKSEVIACRTVGSWKQQLLRGKQSHKLIVVDFTATWCGPCRAIAPVVADLAKKMSNVV 60
           MA K EVIACRTVGSWKQQLL+GKQS+KLIVVDFTA WCGPCRA+APV A+LAKKMSNV+
Sbjct: 36  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 95

Query: 61  FLKVDVDELISVGAEWGVSSLPCFMFLKNGKVVEMFVGARKDELQKIVLRHA 113
           FLKVDVDEL++V AEWGVS+LPCFMFLKNGKVV+ FVGARKD+LQKIVL++A
Sbjct: 96  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 147

[Close]

BLAST of Sed0016757 vs. NCBI nr
Match: XP_022982430.1 (thioredoxin H1-like [Cucurbita maxima] >XP_022982431.1 thioredoxin H1-like [Cucurbita maxima])

HSP 1 Score: 199.5 bits (506), Expect = 1.5e-47
Identity = 93/112 (83.04%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MAAKSEVIACRTVGSWKQQLLRGKQSHKLIVVDFTATWCGPCRAIAPVVADLAKKMSNVV 60
           MA K EVIAC TVGSWKQQLL+GKQS+KLIVVDFTA WCGPCRA+APV A+LAKK+SNV+
Sbjct: 1   MAGKGEVIACHTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKISNVI 60

Query: 61  FLKVDVDELISVGAEWGVSSLPCFMFLKNGKVVEMFVGARKDELQKIVLRHA 113
           FLKVDVDEL++V AEWGVS+LPCFMFLKNGKVV+ FVGARKD+LQKIVL+HA
Sbjct: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQHA 112

[Close]

BLAST of Sed0016757 vs. NCBI nr
Match: XP_023525273.1 (thioredoxin H1-like [Cucurbita pepo subsp. pepo] >XP_023525274.1 thioredoxin H1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 197.6 bits (501), Expect = 5.7e-47
Identity = 92/112 (82.14%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MAAKSEVIACRTVGSWKQQLLRGKQSHKLIVVDFTATWCGPCRAIAPVVADLAKKMSNVV 60
           MA K EVIAC TVGSWKQQ+L+GKQS+KLIVVDFTA WCGPCRA+APV A+LAKKMSNV+
Sbjct: 1   MAGKGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 60

Query: 61  FLKVDVDELISVGAEWGVSSLPCFMFLKNGKVVEMFVGARKDELQKIVLRHA 113
           FLKVDVDEL++V AEWGVS+LPCFMFLKNGKVV+ FVGARKD+LQKIVL++A
Sbjct: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 112

[Close]

BLAST of Sed0016757 vs. ExPASy Swiss-Prot
Match: Q43636 (Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.4e-34
Identity = 65/110 (59.09%), Postives = 84/110 (76.36%), Query Frame = 0


Query: 2   AAKSEVIACRTVGSWKQQLLRGKQSHKLIVVDFTATWCGPCRAIAPVVADLAKKMSNVVF 61
           A + +VI C TV +W +QL +G  +  LIVVDFTA+WCGPCR IAP +A+LAKK+ NV F
Sbjct: 3   AEEGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVTF 62

Query: 62  LKVDVDELISVGAEWGVSSLPCFMFLKNGKVVEMFVGARKDELQKIVLRH 112
           LKVDVDEL +V  EW V S+P FMFLK GK+++  VGA+KDELQ+ + +H
Sbjct: 63  LKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKH 112

[Close]

BLAST of Sed0016757 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 5.8e-34
Identity = 62/108 (57.41%), Postives = 83/108 (76.85%), Query Frame = 0


Query: 4   KSEVIACRTVGSWKQQLLRGKQSHKLIVVDFTATWCGPCRAIAPVVADLAKKMSNVVFLK 63
           + +VIAC TV +W +QL +  +S  L+VVDFTA+WCGPCR IAP  ADLAKK+ NV+FLK
Sbjct: 5   EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLK 64

Query: 64  VDVDELISVGAEWGVSSLPCFMFLKNGKVVEMFVGARKDELQKIVLRH 112
           VD DEL SV ++W + ++P FMFLK GK+++  VGA+KDELQ  + +H
Sbjct: 65  VDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]

BLAST of Sed0016757 vs. ExPASy Swiss-Prot
Match: P29449 (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 8.4e-33
Identity = 59/109 (54.13%), Postives = 85/109 (77.98%), Query Frame = 0


Query: 4   KSEVIACRTVGSWKQQLLRGKQSHKLIVVDFTATWCGPCRAIAPVVADLAKKMSNVVFLK 63
           + +V  C  V  W +   +G ++ KL+VVDFTA+WCGPCR IAP++AD+AKKM +V+FLK
Sbjct: 11  EGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIFLK 70

Query: 64  VDVDELISVGAEWGVSSLPCFMFLKNGKVVEMFVGARKDELQKIVLRHA 113
           VDVDEL +V AEW V ++P F+F+K+GK V+  VGA+K+ELQ+ +++HA
Sbjct: 71  VDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHA 119

[Close]

BLAST of Sed0016757 vs. ExPASy Swiss-Prot
Match: Q07090 (Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 7.1e-32
Identity = 63/111 (56.76%), Postives = 80/111 (72.07%), Query Frame = 0


Query: 1   MAAKSEVIACRTVGSWKQQLLRGKQSHKLIVVDFTATWCGPCRAIAPVVADLAKKMSNVV 60
           MA + +VI   TV +W + L +G    KLIVVDFTA+WCGPC+ IA   A+LAKKM  V 
Sbjct: 1   MAEEGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVT 60

Query: 61  FLKVDVDELISVGAEWGVSSLPCFMFLKNGKVVEMFVGARKDELQKIVLRH 112
           FLKVDVDEL SV  +W V ++P FMFLK GK+V+  VGA+KDELQ+ + +H
Sbjct: 61  FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKH 111

[Close]

BLAST of Sed0016757 vs. ExPASy Swiss-Prot
Match: Q39241 (Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.9e-29
Identity = 56/111 (50.45%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 1   MAAKSEVIACRTVGSWKQQLLRGKQSHKLIVVDFTATWCGPCRAIAPVVADLAKKMSNVV 60
           MA + EVIAC T+  W +++    +S KLIV+DFTA+WC PCR IAPV A++AKK +NVV
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 61  FLKVDVDELISVGAEWGVSSLPCFMFLKNGKVVEMFVGARKDELQKIVLRH 112
           F K+DVDEL +V  E+ V ++P F+F+K G +++  VGA KDE+ + +++H
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of Sed0016757 vs. ExPASy TrEMBL
Match: A0A6J1FL98 (thioredoxin H1-like OS=Cucurbita moschata OX=3662 GN=LOC111446441 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.1e-48
Identity = 95/112 (84.82%), Postives = 107/112 (95.54%), Query Frame = 0


Query: 1   MAAKSEVIACRTVGSWKQQLLRGKQSHKLIVVDFTATWCGPCRAIAPVVADLAKKMSNVV 60
           MA K EVIACRTVGSWKQQLL+GKQS+KLIVVDFTATWCGPCRA+APV A+LAKKMSNV+
Sbjct: 8   MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVI 67

Query: 61  FLKVDVDELISVGAEWGVSSLPCFMFLKNGKVVEMFVGARKDELQKIVLRHA 113
           FLKVDVDEL++V AEWGVS+LPCFMFLKNGKVV+ FVGARKD+LQKIVL++A
Sbjct: 68  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 119

[Close]

BLAST of Sed0016757 vs. ExPASy TrEMBL
Match: A0A6J1IZB4 (thioredoxin H1-like OS=Cucurbita maxima OX=3661 GN=LOC111481260 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.3e-48
Identity = 93/112 (83.04%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MAAKSEVIACRTVGSWKQQLLRGKQSHKLIVVDFTATWCGPCRAIAPVVADLAKKMSNVV 60
           MA K EVIAC TVGSWKQQLL+GKQS+KLIVVDFTA WCGPCRA+APV A+LAKK+SNV+
Sbjct: 1   MAGKGEVIACHTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKISNVI 60

Query: 61  FLKVDVDELISVGAEWGVSSLPCFMFLKNGKVVEMFVGARKDELQKIVLRHA 113
           FLKVDVDEL++V AEWGVS+LPCFMFLKNGKVV+ FVGARKD+LQKIVL+HA
Sbjct: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQHA 112

[Close]

BLAST of Sed0016757 vs. ExPASy TrEMBL
Match: A0A6J1IM69 (thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111476523 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.3e-44
Identity = 90/112 (80.36%), Postives = 98/112 (87.50%), Query Frame = 0


Query: 1   MAAKSEVIACRTVGSWKQQLLRGKQSHKLIVVDFTATWCGPCRAIAPVVADLAKKMSNVV 60
           MA  S VI C TVGSWKQQLL+GKQS+KLIVVDFTA WCGPCRAIAP  A+LAKKMSNV+
Sbjct: 1   MAENSGVITCHTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAIAPAFAELAKKMSNVI 60

Query: 61  FLKVDVDELISVGAEWGVSSLPCFMFLKNGKVVEMFVGARKDELQKIVLRHA 113
           FLKVDVD+L +V AEWGV +LPCFMFLKNGKVV  FVGARKD LQKIVL+HA
Sbjct: 61  FLKVDVDKLNTVAAEWGVGALPCFMFLKNGKVVARFVGARKDALQKIVLQHA 112

[Close]

BLAST of Sed0016757 vs. ExPASy TrEMBL
Match: A0A5A7V9W3 (Thioredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00080 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-43
Identity = 87/112 (77.68%), Postives = 98/112 (87.50%), Query Frame = 0


Query: 1   MAAKSEVIACRTVGSWKQQLLRGKQSHKLIVVDFTATWCGPCRAIAPVVADLAKKMSNVV 60
           MA KS+VI C TV SWKQQLL+GKQS KLIVVDFTA WCGPCRAIAPV  +LA+KMSNV+
Sbjct: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60

Query: 61  FLKVDVDELISVGAEWGVSSLPCFMFLKNGKVVEMFVGARKDELQKIVLRHA 113
           FLKVDVD+L +V AEWGVS+LPCFMFLKNG VV+ FVGARKD L+K+VL HA
Sbjct: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA 112

[Close]

BLAST of Sed0016757 vs. ExPASy TrEMBL
Match: A0A1S3CSR4 (Thioredoxin OS=Cucumis melo OX=3656 GN=LOC103503910 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-43
Identity = 87/112 (77.68%), Postives = 98/112 (87.50%), Query Frame = 0


Query: 1   MAAKSEVIACRTVGSWKQQLLRGKQSHKLIVVDFTATWCGPCRAIAPVVADLAKKMSNVV 60
           MA KS+VI C TV SWKQQLL+GKQS KLIVVDFTA WCGPCRAIAPV  +LA+KMSNV+
Sbjct: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60

Query: 61  FLKVDVDELISVGAEWGVSSLPCFMFLKNGKVVEMFVGARKDELQKIVLRHA 113
           FLKVDVD+L +V AEWGVS+LPCFMFLKNG VV+ FVGARKD L+K+VL HA
Sbjct: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA 112

[Close]

BLAST of Sed0016757 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 144.8 bits (364), Expect = 4.1e-35
Identity = 62/108 (57.41%), Postives = 83/108 (76.85%), Query Frame = 0


Query: 4   KSEVIACRTVGSWKQQLLRGKQSHKLIVVDFTATWCGPCRAIAPVVADLAKKMSNVVFLK 63
           + +VIAC TV +W +QL +  +S  L+VVDFTA+WCGPCR IAP  ADLAKK+ NV+FLK
Sbjct: 5   EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLK 64

Query: 64  VDVDELISVGAEWGVSSLPCFMFLKNGKVVEMFVGARKDELQKIVLRH 112
           VD DEL SV ++W + ++P FMFLK GK+++  VGA+KDELQ  + +H
Sbjct: 65  VDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]

BLAST of Sed0016757 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 129.8 bits (325), Expect = 1.4e-30
Identity = 56/111 (50.45%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 1   MAAKSEVIACRTVGSWKQQLLRGKQSHKLIVVDFTATWCGPCRAIAPVVADLAKKMSNVV 60
           MA + EVIAC T+  W +++    +S KLIV+DFTA+WC PCR IAPV A++AKK +NVV
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 61  FLKVDVDELISVGAEWGVSSLPCFMFLKNGKVVEMFVGARKDELQKIVLRH 112
           F K+DVDEL +V  E+ V ++P F+F+K G +++  VGA KDE+ + +++H
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of Sed0016757 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 129.0 bits (323), Expect = 2.3e-30
Identity = 62/111 (55.86%), Postives = 80/111 (72.07%), Query Frame = 0


Query: 1   MAAKSEVIACRTVGSWKQQLLRGKQSHKLIVVDFTATWCGPCRAIAPVVADLAKKMSNVV 60
           MAA+ EVIAC TV  W ++L    +S KLIV+DFTATWC PCR IAPV ADLAKK  +VV
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60

Query: 61  FLKVDVDELISVGAEWGVSSLPCFMFLKNGKVVEMFVGARKDELQKIVLRH 112
           F KVDVDEL +V  E+ V ++P F+F+K G++ E  VGA K+E+   + +H
Sbjct: 61  FFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKH 111

[Close]

BLAST of Sed0016757 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 127.9 bits (320), Expect = 5.2e-30
Identity = 60/111 (54.05%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 2   AAKSEVIACRTVGSWKQQLLRGKQSHKLIVVDFTATWCGPCRAIAPVVADLAKK-MSNVV 61
           A + +VI C T   W  QL + K+S+KLIV+DFTA+WC PCR IAP+  DLAKK MS+ +
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 62  FLKVDVDELISVGAEWGVSSLPCFMFLKNGKVVEMFVGARKDELQKIVLRH 112
           F KVDVDEL SV  E+GV ++P F+F+K G+VV+  VGA K++LQ  +++H
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

[Close]

BLAST of Sed0016757 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 105.1 bits (261), Expect = 3.6e-23
Identity = 47/104 (45.19%), Postives = 71/104 (68.27%), Query Frame = 0


Query: 5   SEVIACRTVGSWKQQLLRGKQSHKLIVVDFTATWCGPCRAIAPVVADLAKKMSNVVFLKV 64
           S V+   +   W+      K+S+KL+VVDF+A+WCGPCR I P +  +A K ++V F+K+
Sbjct: 25  SRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKL 84

Query: 65  DVDELISVGAEWGVSSLPCFMFLKNGKVVEMFVGARKDELQKIV 109
           DVDEL  V  E+ V+++P F+ +K GK +E  +GA+KDEL+K V
Sbjct: 85  DVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKV 128

The following BLAST results are available for this feature:

BLAST of Sed0016757 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941032.1	2.3e-48	84.82	thioredoxin H1-like [Cucurbita moschata]	[more]
KAG7037881.1	8.9e-48	83.93	Thioredoxin H1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6608561.1	8.9e-48	83.93	Thioredoxin H1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022982430.1	1.5e-47	83.04	thioredoxin H1-like [Cucurbita maxima] >XP_022982431.1 thioredoxin H1-like [Cucu...	[more]
XP_023525273.1	5.7e-47	82.14	thioredoxin H1-like [Cucurbita pepo subsp. pepo] >XP_023525274.1 thioredoxin H1-...	[more]

BLAST of Sed0016757 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43636	3.4e-34	59.09	Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1	[more]
P29448	5.8e-34	57.41	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]
P29449	8.4e-33	54.13	Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q07090	7.1e-32	56.76	Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1	[more]
Q39241	1.9e-29	50.45	Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1	[more]

BLAST of Sed0016757 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FL98	1.1e-48	84.82	thioredoxin H1-like OS=Cucurbita moschata OX=3662 GN=LOC111446441 PE=4 SV=1	[more]
A0A6J1IZB4	7.3e-48	83.04	thioredoxin H1-like OS=Cucurbita maxima OX=3661 GN=LOC111481260 PE=4 SV=1	[more]
A0A6J1IM69	1.3e-44	80.36	thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111476523 PE=4 SV=1	[more]
A0A5A7V9W3	1.1e-43	77.68	Thioredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00080 PE...	[more]
A0A1S3CSR4	1.1e-43	77.68	Thioredoxin OS=Cucumis melo OX=3656 GN=LOC103503910 PE=3 SV=1	[more]

BLAST of Sed0016757 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51030.1	4.1e-35	57.41	thioredoxin H-type 1	[more]
AT1G45145.1	1.4e-30	50.45	thioredoxin H-type 5	[more]
AT5G42980.1	2.3e-30	55.86	thioredoxin 3	[more]
AT1G19730.1	5.2e-30	54.05	Thioredoxin superfamily protein	[more]
AT5G39950.1	3.6e-23	45.19	thioredoxin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 30..38 score: 53.27 coord: 38..47 score: 67.0 coord: 77..88 score: 32.96
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..112 e-value: 1.4E-36 score: 127.1
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..112
None	No IPR available	PANTHER	PTHR10438:SF431	THIOREDOXIN	coord: 1..112
None	No IPR available	CDD	cd02947	TRX_family	coord: 25..108 e-value: 1.58387E-34 score: 112.652
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 13..108 e-value: 1.3E-27 score: 95.8
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..112 score: 12.627577
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 31..49
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 6..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016757.1	Sed0016757.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
molecular_function	GO:0015035	protein-disulfide reductase activity