Sed0016720 (gene) Chayote v1

Overview


Name	Sed0016720
Type	gene
Organism	Sechium edule (Chayote v1)
Description	SAUR-like auxin-responsive protein family
Location	LG03: 11045677 .. 11046202 (-)
RNA-Seq Expression	Sed0016720
Synteny	Sed0016720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCATCTCTCTCAATTCACAACTCCAATCCAATGGCAGTGACCGGAAAGCTAACGCAGGCGGCCGTGGTCCGGCAAATCATAAAGCGGTGTTCAAGTTTGAGAAAAAACAAAAACAAAAACGACGACGGTGGCGGTGGCGGTGGCGGTGGCAGAAATACTCCGGTCGATGTGCCGAAGGGGCATTTCGTGGTGTACGTCAGTGAAAACAGAAGCAGGTACATTGTGCCGCTCACGTTTCTTGCAAGGCCAGAGTTTCAAACTCTTCTCCAATTGGCCGAGGAAGAGTTCGGGTTTAATCATGGAATGGGCCTCACTATTCCATGCGAAGAGCACCTCTTTCGGTCTATGCTACTCTCGTGAACCCAACCGAATCCAACCGAGTTGTTTTATCTAATCGGTGATTTAAGGTTTAGGGTTTAGGGTTTAGTGTTTTCGATCATGAGAGCTGTTGTCGGCTATTCATGTGTTCGAGAAATTACTTGATGAGGAGATTGTAACAATGTGACTGAGTGAGTAATTTTAG

mRNA sequence

TTTTCATCTCTCTCAATTCACAACTCCAATCCAATGGCAGTGACCGGAAAGCTAACGCAGGCGGCCGTGGTCCGGCAAATCATAAAGCGGTGTTCAAGTTTGAGAAAAAACAAAAACAAAAACGACGACGGTGGCGGTGGCGGTGGCGGTGGCAGAAATACTCCGGTCGATGTGCCGAAGGGGCATTTCGTGGTGTACGTCAGTGAAAACAGAAGCAGGTACATTGTGCCGCTCACGTTTCTTGCAAGGCCAGAGTTTCAAACTCTTCTCCAATTGGCCGAGGAAGAGTTCGGGTTTAATCATGGAATGGGCCTCACTATTCCATGCGAAGAGCACCTCTTTCGGTCTATGCTACTCTCGTGAACCCAACCGAATCCAACCGAGTTGTTTTATCTAATCGGTGATTTAAGGTTTAGGGTTTAGGGTTTAGTGTTTTCGATCATGAGAGCTGTTGTCGGCTATTCATGTGTTCGAGAAATTACTTGATGAGGAGATTGTAACAATGTGACTGAGTGAGTAATTTTAG

Coding sequence (CDS)

ATGGCAGTGACCGGAAAGCTAACGCAGGCGGCCGTGGTCCGGCAAATCATAAAGCGGTGTTCAAGTTTGAGAAAAAACAAAAACAAAAACGACGACGGTGGCGGTGGCGGTGGCGGTGGCAGAAATACTCCGGTCGATGTGCCGAAGGGGCATTTCGTGGTGTACGTCAGTGAAAACAGAAGCAGGTACATTGTGCCGCTCACGTTTCTTGCAAGGCCAGAGTTTCAAACTCTTCTCCAATTGGCCGAGGAAGAGTTCGGGTTTAATCATGGAATGGGCCTCACTATTCCATGCGAAGAGCACCTCTTTCGGTCTATGCTACTCTCGTGA

Protein sequence

MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSMLLS

Homology

[Close]

BLAST of Sed0016720 vs. NCBI nr
Match: XP_023002557.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 159.5 bits (402), Expect = 1.7e-35
Identity = 79/107 (73.83%), Postives = 93/107 (86.92%), Query Frame = 0


Query: 1   MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENR 60
           MAV+ +L+QAAVV+QI+KRCSSLR NK  +  GG GGGGG + PVDVPKGHFVVYV ENR
Sbjct: 1   MAVSNRLSQAAVVKQIMKRCSSLR-NKKTHQCGGAGGGGGGDIPVDVPKGHFVVYVGENR 60

Query: 61  SRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSML 108
           SRYIVP+TFL+ PEFQ LLQLAEEEFGF+H MGLTIPC+E +F+S+L
Sbjct: 61  SRYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLL 106

[Close]

BLAST of Sed0016720 vs. NCBI nr
Match: XP_038886317.1 (auxin-responsive protein SAUR50-like [Benincasa hispida])

HSP 1 Score: 158.7 bits (400), Expect = 2.9e-35
Identity = 83/106 (78.30%), Postives = 88/106 (83.02%), Query Frame = 0


Query: 1   MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENR 60
           MAV+ KLTQ AVV+QI KRCSSLR NKNKN     GGG     PVDVPKGHFVVYVSENR
Sbjct: 1   MAVSTKLTQTAVVKQIKKRCSSLRINKNKNTHLQCGGGD--EIPVDVPKGHFVVYVSENR 60

Query: 61  SRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSM 107
           SRYIVPLTFL RPEFQ LLQLAEEEFGFNH MGLTIPCEE +F+S+
Sbjct: 61  SRYIVPLTFLTRPEFQILLQLAEEEFGFNHNMGLTIPCEEQVFQSL 104

[Close]

BLAST of Sed0016720 vs. NCBI nr
Match: XP_008444786.1 (PREDICTED: auxin-induced protein 15A-like [Cucumis melo] >KAA0065174.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa])

HSP 1 Score: 156.4 bits (394), Expect = 1.4e-34
Identity = 83/113 (73.45%), Postives = 90/113 (79.65%), Query Frame = 0


Query: 1   MAVTGKLTQAAVVRQIIKRCSSLR---KNKNKNDDGGGG----GGGGRNTPVDVPKGHFV 60
           MAV+ KLT  AVV+QI KRCSSLR   KNKN N++        GGGG   PVDVPKGHFV
Sbjct: 1   MAVSTKLTHTAVVKQIKKRCSSLRITKKNKNNNNNNNTHHLQCGGGGEEIPVDVPKGHFV 60

Query: 61  VYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSM 107
           VYVSENRSRYIVPLTFL RPEFQ LLQLAEEEFGF+H MGLTIPCEE +FRS+
Sbjct: 61  VYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHTMGLTIPCEEQVFRSL 113

[Close]

BLAST of Sed0016720 vs. NCBI nr
Match: XP_023538452.1 (auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 154.1 bits (388), Expect = 7.1e-34
Identity = 79/109 (72.48%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 1   MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENR 60
           MAVT +L+QAAVV+QI+KRCSSLR NK  +  GG GGG   + PVDVPKGHFVVYV ENR
Sbjct: 1   MAVTSRLSQAAVVKQIMKRCSSLR-NKKSHQCGGAGGG---DIPVDVPKGHFVVYVGENR 60

Query: 61  SRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSMLLS 110
           SRYIVP+TFL+ PEFQ LLQLAEEEFGF+H MGLTIPC+E +F+S+L S
Sbjct: 61  SRYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRS 105

[Close]

BLAST of Sed0016720 vs. NCBI nr
Match: XP_022951771.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata])

HSP 1 Score: 153.7 bits (387), Expect = 9.3e-34
Identity = 79/109 (72.48%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 1   MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENR 60
           MAVT +L+QAAVV+QI+KRCSSLR NK  +  GG GGG   + PVDVPKGHFVVYV ENR
Sbjct: 1   MAVTSRLSQAAVVKQIMKRCSSLR-NKKTHQCGGAGGG---DIPVDVPKGHFVVYVGENR 60

Query: 61  SRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSMLLS 110
           SRYIVP+TFL+ PEFQ LLQLAEEEFGF+H MGLTIPC+E +F+S+L S
Sbjct: 61  SRYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRS 105

[Close]

BLAST of Sed0016720 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.2e-29
Identity = 65/106 (61.32%), Postives = 79/106 (74.53%), Query Frame = 0


Query: 1   MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENR 60
           M  T KLTQ A+++QI+KRCSSL K         GGG      P+DVPKGHF VYV ENR
Sbjct: 4   MKKTSKLTQTAMLKQILKRCSSLGKK-------NGGGYDEDCLPLDVPKGHFPVYVGENR 63

Query: 61  SRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSM 107
           SRYIVP++FL  PEFQ+LLQ AEEEFGF+H MGLTIPC+E +F+++
Sbjct: 64  SRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTL 102

[Close]

BLAST of Sed0016720 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.9e-27
Identity = 63/100 (63.00%), Postives = 76/100 (76.00%), Query Frame = 0


Query: 8   TQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPL 67
           +QAA ++QI+KRCSSLRK KN N   G       + P DVPKGHF VYV  NRSRYIVP+
Sbjct: 12  SQAASIKQIVKRCSSLRKMKNVN---GCYYNQEDDLPQDVPKGHFPVYVGPNRSRYIVPI 71

Query: 68  TFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSML 108
           ++L   EFQTLL+LAEEEFGF+H MGLTIPC+E  FRS++
Sbjct: 72  SWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLI 108

[Close]

BLAST of Sed0016720 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 9.0e-24
Identity = 58/100 (58.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 6   KLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIV 65
           K TQA  +++IIK+CSS  KN   NDD G         P DVPKGHFVVYV E R+RYIV
Sbjct: 9   KQTQALAIKKIIKKCSSFGKN---NDDSG--------LPNDVPKGHFVVYVGERRNRYIV 68

Query: 66  PLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRS 106
           P++ L  P FQ LLQ +EEEFGFNH MG+ IPC+E  F S
Sbjct: 69  PISCLDHPTFQDLLQRSEEEFGFNHDMGIIIPCQEVDFLS 97

[Close]

BLAST of Sed0016720 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.4e-13
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 0


Query: 45  VDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGM-GLTIPCEEHLF 104
           +D PKG+  VYV EN  R+++P++ L +P FQ LL  AEEEFG++H M GLTIPC E LF
Sbjct: 23  LDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLF 82

[Close]

BLAST of Sed0016720 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.9e-13
Identity = 32/61 (52.46%), Postives = 45/61 (73.77%), Query Frame = 0


Query: 45  VDVPKGHFVVYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGM-GLTIPCEEHLF 104
           VD PKG+  VYV E   R+++P++++ +P FQ LL  AEEEFG++H M GLTIPC E +F
Sbjct: 15  VDAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVF 74

[Close]

BLAST of Sed0016720 vs. ExPASy TrEMBL
Match: A0A6J1KJU9 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111496367 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 8.2e-36
Identity = 79/107 (73.83%), Postives = 93/107 (86.92%), Query Frame = 0


Query: 1   MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENR 60
           MAV+ +L+QAAVV+QI+KRCSSLR NK  +  GG GGGGG + PVDVPKGHFVVYV ENR
Sbjct: 1   MAVSNRLSQAAVVKQIMKRCSSLR-NKKTHQCGGAGGGGGGDIPVDVPKGHFVVYVGENR 60

Query: 61  SRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSML 108
           SRYIVP+TFL+ PEFQ LLQLAEEEFGF+H MGLTIPC+E +F+S+L
Sbjct: 61  SRYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLL 106

[Close]

BLAST of Sed0016720 vs. ExPASy TrEMBL
Match: A0A5A7VD05 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005110 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.9e-35
Identity = 83/113 (73.45%), Postives = 90/113 (79.65%), Query Frame = 0


Query: 1   MAVTGKLTQAAVVRQIIKRCSSLR---KNKNKNDDGGGG----GGGGRNTPVDVPKGHFV 60
           MAV+ KLT  AVV+QI KRCSSLR   KNKN N++        GGGG   PVDVPKGHFV
Sbjct: 1   MAVSTKLTHTAVVKQIKKRCSSLRITKKNKNNNNNNNTHHLQCGGGGEEIPVDVPKGHFV 60

Query: 61  VYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSM 107
           VYVSENRSRYIVPLTFL RPEFQ LLQLAEEEFGF+H MGLTIPCEE +FRS+
Sbjct: 61  VYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHTMGLTIPCEEQVFRSL 113

[Close]

BLAST of Sed0016720 vs. ExPASy TrEMBL
Match: A0A1S3BB62 (auxin-induced protein 15A-like OS=Cucumis melo OX=3656 GN=LOC103488031 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.9e-35
Identity = 83/113 (73.45%), Postives = 90/113 (79.65%), Query Frame = 0


Query: 1   MAVTGKLTQAAVVRQIIKRCSSLR---KNKNKNDDGGGG----GGGGRNTPVDVPKGHFV 60
           MAV+ KLT  AVV+QI KRCSSLR   KNKN N++        GGGG   PVDVPKGHFV
Sbjct: 1   MAVSTKLTHTAVVKQIKKRCSSLRITKKNKNNNNNNNTHHLQCGGGGEEIPVDVPKGHFV 60

Query: 61  VYVSENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSM 107
           VYVSENRSRYIVPLTFL RPEFQ LLQLAEEEFGF+H MGLTIPCEE +FRS+
Sbjct: 61  VYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHTMGLTIPCEEQVFRSL 113

[Close]

BLAST of Sed0016720 vs. ExPASy TrEMBL
Match: A0A6J1GIF7 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111454508 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.5e-34
Identity = 79/109 (72.48%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 1   MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENR 60
           MAVT +L+QAAVV+QI+KRCSSLR NK  +  GG GGG   + PVDVPKGHFVVYV ENR
Sbjct: 1   MAVTSRLSQAAVVKQIMKRCSSLR-NKKTHQCGGAGGG---DIPVDVPKGHFVVYVGENR 60

Query: 61  SRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSMLLS 110
           SRYIVP+TFL+ PEFQ LLQLAEEEFGF+H MGLTIPC+E +F+S+L S
Sbjct: 61  SRYIVPVTFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSLLRS 105

[Close]

BLAST of Sed0016720 vs. ExPASy TrEMBL
Match: A0A0A0LRM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G366710 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.0e-33
Identity = 81/110 (73.64%), Postives = 89/110 (80.91%), Query Frame = 0


Query: 1   MAVTGKLTQAAVVRQIIKRCSSLR---KNKNKNDDGGG-GGGGGRNTPVDVPKGHFVVYV 60
           MAV+ KLT  AVV+QI KRCSSLR   KNKN N++      GGG   PVDVPKGHFVVYV
Sbjct: 1   MAVSTKLTHTAVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGGGEEIPVDVPKGHFVVYV 60

Query: 61  SENRSRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSM 107
           SENRSRYIVPLTFL RPEFQ LLQLAEEEFGF+H MGLTIPCEE +F+S+
Sbjct: 61  SENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSL 110

[Close]

BLAST of Sed0016720 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 134.0 bits (336), Expect = 7.1e-32
Identity = 65/103 (63.11%), Postives = 80/103 (77.67%), Query Frame = 0


Query: 4   TGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRY 63
           + KLTQ A+++QI+KRCSSL KN+  ++DG          PVDVPKGHF VYV E RSRY
Sbjct: 6   SSKLTQTAMLKQILKRCSSLAKNQCYDEDG---------LPVDVPKGHFPVYVGEKRSRY 65

Query: 64  IVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSM 107
           IVP++FL  P+F++LLQ AEEEFGFNH MGLTIPCEE +FRS+
Sbjct: 66  IVPISFLTHPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSL 99

[Close]

BLAST of Sed0016720 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 129.8 bits (325), Expect = 1.3e-30
Identity = 67/106 (63.21%), Postives = 80/106 (75.47%), Query Frame = 0


Query: 1   MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENR 60
           M    KLTQ A+++QI+KRCSSL K K  N  G    G    +P++VPKGHFVVYV ENR
Sbjct: 3   MKKANKLTQTAMIKQILKRCSSLGK-KQSNVYGEDENG----SPLNVPKGHFVVYVGENR 62

Query: 61  SRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSM 107
            RY+VP++FL RPEFQ LLQ AEEEFGF+H MGLTIPCEE +FRS+
Sbjct: 63  VRYVVPISFLTRPEFQLLLQQAEEEFGFDHDMGLTIPCEEVVFRSL 103

[Close]

BLAST of Sed0016720 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 128.6 bits (322), Expect = 3.0e-30
Identity = 65/106 (61.32%), Postives = 79/106 (74.53%), Query Frame = 0


Query: 1   MAVTGKLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENR 60
           M  T KLTQ A+++QI+KRCSSL K         GGG      P+DVPKGHF VYV ENR
Sbjct: 4   MKKTSKLTQTAMLKQILKRCSSLGKK-------NGGGYDEDCLPLDVPKGHFPVYVGENR 63

Query: 61  SRYIVPLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSM 107
           SRYIVP++FL  PEFQ+LLQ AEEEFGF+H MGLTIPC+E +F+++
Sbjct: 64  SRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTL 102

[Close]

BLAST of Sed0016720 vs. TAIR 10
Match: AT1G19830.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 125.2 bits (313), Expect = 3.3e-29
Identity = 62/104 (59.62%), Postives = 78/104 (75.00%), Query Frame = 0


Query: 6   KLTQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIV 65
           KLTQ  +++QI+KRCSSL K K  ++        G + P+DVPKGHFVVYV  NR RY++
Sbjct: 8   KLTQTTMIKQILKRCSSLGK-KQSSEYNDTHEHDGDSLPLDVPKGHFVVYVGGNRVRYVL 67

Query: 66  PLTFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSMLLS 110
           P++FL RPEFQ LLQ AEEEFGF+H MGLTIPCEE  F+S++ S
Sbjct: 68  PISFLTRPEFQLLLQQAEEEFGFDHNMGLTIPCEEVAFKSLITS 110

[Close]

BLAST of Sed0016720 vs. TAIR 10
Match: AT2G18010.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 122.1 bits (305), Expect = 2.8e-28
Identity = 63/100 (63.00%), Postives = 76/100 (76.00%), Query Frame = 0


Query: 8   TQAAVVRQIIKRCSSLRKNKNKNDDGGGGGGGGRNTPVDVPKGHFVVYVSENRSRYIVPL 67
           +QAA ++QI+KRCSSLRK KN N   G       + P DVPKGHF VYV  NRSRYIVP+
Sbjct: 12  SQAASIKQIVKRCSSLRKMKNVN---GCYYNQEDDLPQDVPKGHFPVYVGPNRSRYIVPI 71

Query: 68  TFLARPEFQTLLQLAEEEFGFNHGMGLTIPCEEHLFRSML 108
           ++L   EFQTLL+LAEEEFGF+H MGLTIPC+E  FRS++
Sbjct: 72  SWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLI 108

The following BLAST results are available for this feature:

BLAST of Sed0016720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023002557.1	1.7e-35	73.83	auxin-responsive protein SAUR50-like [Cucurbita maxima]	[more]
XP_038886317.1	2.9e-35	78.30	auxin-responsive protein SAUR50-like [Benincasa hispida]	[more]
XP_008444786.1	1.4e-34	73.45	PREDICTED: auxin-induced protein 15A-like [Cucumis melo] >KAA0065174.1 auxin-ind...	[more]
XP_023538452.1	7.1e-34	72.48	auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]	[more]
XP_022951771.1	9.3e-34	72.48	auxin-responsive protein SAUR50-like [Cucurbita moschata]	[more]

BLAST of Sed0016720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	4.2e-29	61.32	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
Q9SL45	3.9e-27	63.00	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
P0DKL1	9.0e-24	58.00	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
P32295	1.4e-13	55.74	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]
P33082	1.9e-13	52.46	Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of Sed0016720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KJU9	8.2e-36	73.83	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111496367...	[more]
A0A5A7VD05	6.9e-35	73.45	Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3BB62	6.9e-35	73.45	auxin-induced protein 15A-like OS=Cucumis melo OX=3656 GN=LOC103488031 PE=3 SV=1	[more]
A0A6J1GIF7	4.5e-34	72.48	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114545...	[more]
A0A0A0LRM7	1.0e-33	73.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G366710 PE=3 SV=1	[more]

BLAST of Sed0016720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21220.1	7.1e-32	63.11	SAUR-like auxin-responsive protein family	[more]
AT1G75580.1	1.3e-30	63.21	SAUR-like auxin-responsive protein family	[more]
AT4G34760.1	3.0e-30	61.32	SAUR-like auxin-responsive protein family	[more]
AT1G19830.1	3.3e-29	59.62	SAUR-like auxin-responsive protein family	[more]
AT2G18010.1	2.8e-28	63.00	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 31..107 e-value: 7.3E-25 score: 87.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..45
None	No IPR available	PANTHER	PTHR31374:SF242	AUXIN-INDUCED PROTEIN 15A-LIKE	coord: 5..106
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 5..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016720.1	Sed0016720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin