Sed0016708 (gene) Chayote v1

Overview
NameSed0016708
Typegene
OrganismSechium edule (Chayote v1)
Descriptionneurofilament heavy polypeptide-like isoform X1
LocationLG05: 46042637 .. 46045907 (-)
RNA-Seq ExpressionSed0016708
SyntenySed0016708
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGCCTGTGCGTCTAAGCCGAAGGTCGCCGGTGCCAAGGCTCCCGCTCCGTCTCCGACTCCGGCGCCGGCGCCGGAGAATAAGGTGGAGGAGAAGGATGTTTTCGTTGACGCCGTGGTCGCTTTTGAATCTGATAAGAAACTCGAGGTCACGGCGGAGGATATCGCCGGAGCGGGGAACCAGAGCGATAAAGGCAAGGAAGTTGTTGTTGAACATCGCTCTCTTAGCCACTTGTTTAAGGAGGTAATTTCTTCCATTTGGTTTCTAATTTTCTTGTGATTATCGATGGCTTATCAGTCTTCGAGTTTCTATTGAAAATCCGATCCAAATTTCAGTACAAATTAGGAATTCGTTGTTATTCGTTTTTAGGTTTATGAACTCGTTGAAATCATTTTCTCGCTCTACGTTGTTTGTTGATTGAACTGGATAATTGTGCCGATTGATTTTGTTATTAGGGTTCTCAGCTGATTGATTTTGCCATTCTCGAGAAAAATTTGGGAGACGAAGTATAAAAAAATTGAAGAAAATGTTATTGATATTGATACCTCCTCGTGTTTCTCGATTTGACAAACTTCATATGAACATGCTGTTGCTTTTTTATTATAGCTTATGTATATTTTCTTTTGGAACTTACAAGCTTGTTTGCGAATCTCGGCAGTTACCGGAGAGAAATACTTGCCTCCTTATGATTAAGAACGTGGGAATTTCTCGTTCCCATGAACCAAACCAAAAAGATTTGTTTACTCTTTTCGAGAAAGAAACTTTTATCCTCTTTTGGACGTAAAGCGAAATCAACGGTCCTCCCAAAGGTAAAAAGTGATATAAGGAAATGAAATTATATTTTCCAAAGTAGACCAGTAAGTTCTTCATAATTTATGATTTGTCGGTTCAATCTTTGAAGAACTTTGTTACCTCATTTCCAAGGGTCCCCTTTTCAATTCAAGAACTCTGTTTGATTGAACGTTTGGATGTATAATATGCATCAGCATTTGAGAGGCTTCATCATTTAAGTCCGAATCTCATTTGGAATCAATTCACGGAATCTTTCTCATTCCACAATACATTCGTTTGGTGACAAACAAAAGGGTCTTTCCTTGGAGGGACCCCCTTTTTTCCTTCCTCTTTCTTCTGTTGTTTCTGCTCATGTCTTGCCTCCATCCTGTGAATGTTTTATGGCTCATGGAACTTTACTTGTTTGTCTGCACCTTAAAGAAGTTTCTTTCATTCCCATGTGATCTTGAAGGATTGATGCATTTTTCACCCACACGTTCGGTTATGAGATGCCCCCGGGGCCCTAGTTACATTGCACTGTCCTTTAATTGGGGAAACGCCGATTGGCTTAAAGTTTGTGTTGGGAATGGGATGCAAACAAATAATCCCACATTGGTTAGATAAGAGAAGGATCATAAGTGTATAAGTGATGACAACAATTTCTATTGATATGAGGTCCTTATCAGTTCGATTTGTAGAATATGCTTATATAGCTGTCCTTAGGATCGGGATCTGGATCAGGGGTGGAGCTAGAAATTTTCATGAACCGCCCCTCTTTGTGCCTCACGTTTTCTTGGCCCGACCCAGCAGGTAGCCTGGTTGGCATGTAGTATTTTGTTGAACGATCATTTGCTTTGAAAAAGACTGTTCATCAATGTGATCTTCATTGGCCTAGTGGTGGGTGCCCAAATTGATTGTCTAGATAAATGAGATGAGTGTATTCATAAATGGTTAGCTTAGCTAAGCTGTAGCAGTGTTTTGAAATTGTCGGTTTGAACTGCTTCCAATTATGAGACACAAAGTTTGGTTTGATCTATTCACTACACAAATCAATTTTGTAGTGTAAAATATCATATGACAGCTTAAAGTTTCTTCGCATATTCTAATTCTTCCTTCATTATCAACTAAAATTGTTGTTTTGAACATAAATTCTGAATATTATGCAGAAAGAAGGGGGTGGATCAATTGAATGTGAGGAGCCAACAGGGGAAACAGAGACACTGAAGTCTAAAGAGAGTGAAAGAGATACGAAAGAAGTTGAGACAGAGATCCTTCAAACTGAAGTAGAAACCAAAAAAGGCATAGAAGAACCCGAGACAAAAGCGCTTCAAACTGTAGTTGAAACCGAAAAATGCATAGAAGAACCCGAGACAAAGGTGCCTCAAACTGTAGTTGAAACCGAAAAAAGCGTAGAAGAACCTGAGACAAAGGTGCCTCAAACTGTAGCTGAAACCAAAAAATACATAGAAGAACCCGAGATGAAGGCGCCTCAAACTGTAGTTGAAACTGAGAAATGCATAGAACCCGAGACAAAGGCATCTCCAATTGTAGTTGAAACCGAAAATTTTATTGAACTTTTAGTAGAACCCGAGATTGAGGCACCTCAAACTGTAGTTGAAACCGAAAATTTTATTGAACCTGAAACAAAGGCACCACAAACTATAGTAGAAACCGAAAAACATATAGAAAAAGCTGAGATAAAGGTACCTCAAACTGTAGTAGAGCTTGAGAAACATAAAGAAGAAGCTGAACCAGCGGCACCTCAAACCAAAGTAGTGATCGAAAAATCTGAAGTTCCAGCTGAAAAGGTTCCGATCACTGATGTTCCTACAACTTCTGATATCATTACTGAGGCAAACGTAACTGTGCCTTCACCATCTGATATTACGCTGATAAGTGAAACACCCAAGGAAAAGACATCGGAGGACATAAAATTGCCCGAAAAAGTCGAGAAACCTGAGGTAGTGACATTAGTTGAAGCTATACCAGGAAAAGAAGAGAGTACAAAAATCGAGCAGATGAAAGAAGATATCAGCAATGTCGAGAAGATCGCAACAGGGACACCGAAAGAAATCGAGCCAAAACCCGCAATTCCATCTGAAACAAGTACTGAACCGTCGCAGAAAATCGAAGAAGTGAAGGTAACGGCTGAAGAAAAAGCAAGTTGATGAAAAGTGTGGCATATTTAAGTTGAAGTATAGAAAGTAAAAAGAAAATGCTTTCTTCTTTGCTGTTTAAACTTATTCAGTGGGAGAAACTTTGCCTAAAGAAGAAGTGGCTGCAGTCTGCCATTATCAAGGTTAGATTTGTTATGTGGTTTTTCAAGGCAACTTCTTAAGATGCTCAGTTTCTTTTGTTTTGCTGTATATCATTTGTTGGTTTATCATTAAGTTGCACACTGTCTTTTTTTTGCTTTGCATGTAGACATATGGGTTTGTCAGATTAATATGAATATAAAATGTTCTCCTTACAATGTGAAATTTACAATTCTTCATCA

mRNA sequence

ATGGGAGCCTGTGCGTCTAAGCCGAAGGTCGCCGGTGCCAAGGCTCCCGCTCCGTCTCCGACTCCGGCGCCGGCGCCGGAGAATAAGGTGGAGGAGAAGGATGTTTTCGTTGACGCCGTGGTCGCTTTTGAATCTGATAAGAAACTCGAGGTCACGGCGGAGGATATCGCCGGAGCGGGGAACCAGAGCGATAAAGGCAAGGAAGTTGTTGTTGAACATCGCTCTCTTAGCCACTTGTTTAAGGAGAAAGAAGGGGGTGGATCAATTGAATGTGAGGAGCCAACAGGGGAAACAGAGACACTGAAGTCTAAAGAGAGTGAAAGAGATACGAAAGAAGTTGAGACAGAGATCCTTCAAACTGAAGTAGAAACCAAAAAAGGCATAGAAGAACCCGAGACAAAAGCGCTTCAAACTGTAGTTGAAACCGAAAAATGCATAGAAGAACCCGAGACAAAGGTGCCTCAAACTGTAGTTGAAACCGAAAAAAGCGTAGAAGAACCTGAGACAAAGGTGCCTCAAACTGTAGCTGAAACCAAAAAATACATAGAAGAACCCGAGATGAAGGCGCCTCAAACTGTAGTTGAAACTGAGAAATGCATAGAACCCGAGACAAAGGCATCTCCAATTGTAGTTGAAACCGAAAATTTTATTGAACTTTTAGTAGAACCCGAGATTGAGGCACCTCAAACTGTAGTTGAAACCGAAAATTTTATTGAACCTGAAACAAAGGCACCACAAACTATAGTAGAAACCGAAAAACATATAGAAAAAGCTGAGATAAAGGTACCTCAAACTGTAGTAGAGCTTGAGAAACATAAAGAAGAAGCTGAACCAGCGGCACCTCAAACCAAAGTAGTGATCGAAAAATCTGAAGTTCCAGCTGAAAAGGTTCCGATCACTGATGTTCCTACAACTTCTGATATCATTACTGAGGCAAACGTAACTGTGCCTTCACCATCTGATATTACGCTGATAAGTGAAACACCCAAGGAAAAGACATCGGAGGACATAAAATTGCCCGAAAAAGTCGAGAAACCTGAGGTAGTGACATTAGTTGAAGCTATACCAGGAAAAGAAGAGAGTACAAAAATCGAGCAGATGAAAGAAGATATCAGCAATGTCGAGAAGATCGCAACAGGGACACCGAAAGAAATCGAGCCAAAACCCGCAATTCCATCTGAAACAAGTACTGAACCGTCGCAGAAAATCGAAGAAGTGAAGGTAACGGCTGAAGAAAAAGCAAGTTGATGAAAAGTGTGGCATATTTAAGTTGAAGTATAGAAAGTAAAAAGAAAATGCTTTCTTCTTTGCTGTTTAAACTTATTCAGTGGGAGAAACTTTGCCTAAAGAAGAAGTGGCTGCAGTCTGCCATTATCAAGGTTAGATTTGTTATGTGGTTTTTCAAGGCAACTTCTTAAGATGCTCAGTTTCTTTTGTTTTGCTGTATATCATTTGTTGGTTTATCATTAAGTTGCACACTGTCTTTTTTTTGCTTTGCATGTAGACATATGGGTTTGTCAGATTAATATGAATATAAAATGTTCTCCTTACAATGTGAAATTTACAATTCTTCATCA

Coding sequence (CDS)

ATGGGAGCCTGTGCGTCTAAGCCGAAGGTCGCCGGTGCCAAGGCTCCCGCTCCGTCTCCGACTCCGGCGCCGGCGCCGGAGAATAAGGTGGAGGAGAAGGATGTTTTCGTTGACGCCGTGGTCGCTTTTGAATCTGATAAGAAACTCGAGGTCACGGCGGAGGATATCGCCGGAGCGGGGAACCAGAGCGATAAAGGCAAGGAAGTTGTTGTTGAACATCGCTCTCTTAGCCACTTGTTTAAGGAGAAAGAAGGGGGTGGATCAATTGAATGTGAGGAGCCAACAGGGGAAACAGAGACACTGAAGTCTAAAGAGAGTGAAAGAGATACGAAAGAAGTTGAGACAGAGATCCTTCAAACTGAAGTAGAAACCAAAAAAGGCATAGAAGAACCCGAGACAAAAGCGCTTCAAACTGTAGTTGAAACCGAAAAATGCATAGAAGAACCCGAGACAAAGGTGCCTCAAACTGTAGTTGAAACCGAAAAAAGCGTAGAAGAACCTGAGACAAAGGTGCCTCAAACTGTAGCTGAAACCAAAAAATACATAGAAGAACCCGAGATGAAGGCGCCTCAAACTGTAGTTGAAACTGAGAAATGCATAGAACCCGAGACAAAGGCATCTCCAATTGTAGTTGAAACCGAAAATTTTATTGAACTTTTAGTAGAACCCGAGATTGAGGCACCTCAAACTGTAGTTGAAACCGAAAATTTTATTGAACCTGAAACAAAGGCACCACAAACTATAGTAGAAACCGAAAAACATATAGAAAAAGCTGAGATAAAGGTACCTCAAACTGTAGTAGAGCTTGAGAAACATAAAGAAGAAGCTGAACCAGCGGCACCTCAAACCAAAGTAGTGATCGAAAAATCTGAAGTTCCAGCTGAAAAGGTTCCGATCACTGATGTTCCTACAACTTCTGATATCATTACTGAGGCAAACGTAACTGTGCCTTCACCATCTGATATTACGCTGATAAGTGAAACACCCAAGGAAAAGACATCGGAGGACATAAAATTGCCCGAAAAAGTCGAGAAACCTGAGGTAGTGACATTAGTTGAAGCTATACCAGGAAAAGAAGAGAGTACAAAAATCGAGCAGATGAAAGAAGATATCAGCAATGTCGAGAAGATCGCAACAGGGACACCGAAAGAAATCGAGCCAAAACCCGCAATTCCATCTGAAACAAGTACTGAACCGTCGCAGAAAATCGAAGAAGTGAAGGTAACGGCTGAAGAAAAAGCAAGTTGA

Protein sequence

MGACASKPKVAGAKAPAPSPTPAPAPENKVEEKDVFVDAVVAFESDKKLEVTAEDIAGAGNQSDKGKEVVVEHRSLSHLFKEKEGGGSIECEEPTGETETLKSKESERDTKEVETEILQTEVETKKGIEEPETKALQTVVETEKCIEEPETKVPQTVVETEKSVEEPETKVPQTVAETKKYIEEPEMKAPQTVVETEKCIEPETKASPIVVETENFIELLVEPEIEAPQTVVETENFIEPETKAPQTIVETEKHIEKAEIKVPQTVVELEKHKEEAEPAAPQTKVVIEKSEVPAEKVPITDVPTTSDIITEANVTVPSPSDITLISETPKEKTSEDIKLPEKVEKPEVVTLVEAIPGKEESTKIEQMKEDISNVEKIATGTPKEIEPKPAIPSETSTEPSQKIEEVKVTAEEKAS
Homology
BLAST of Sed0016708 vs. NCBI nr
Match: XP_023007403.1 (neurofilament heavy polypeptide-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 350.9 bits (899), Expect = 1.5e-92
Identity = 249/432 (57.64%), Postives = 290/432 (67.13%), Query Frame = 0

Query: 1   MGACASKPKVAGAKAPAPSPTPAPAPENKVEEKDVFVDAVVAFESDKKLEVTAEDIAGAG 60
           MGACA+KPKV   K       PAP PE  VEEKDVFVD V   E++K  E          
Sbjct: 1   MGACATKPKVDSGK------VPAPVPEKNVEEKDVFVDTVAPVEAEKIFE---------E 60

Query: 61  NQSDKGKEVV---------VEHRSLSHLFKEKEGGGSIECEEPTGETETLKSKESERDTK 120
           NQSDKGKEVV         V+ RSLSHLFKEKEG   + CE P GETE L+SKE+E+D K
Sbjct: 61  NQSDKGKEVVDDDKVDDQSVKRRSLSHLFKEKEGVNQL-CEGPAGETEKLESKETEKDGK 120

Query: 121 EVETEILQTEVETKKGIEEPETKALQTVVETEKCIEEPETKVPQTVVETEKSVEEPETKV 180
           E  T++ QTEVET+K  +EPETK  QTVVETEKC+EEPETK PQTV ETEK +EEPETK 
Sbjct: 121 ESGTKVPQTEVETQKCTQEPETKVPQTVVETEKCVEEPETKAPQTVDETEKCIEEPETKG 180

Query: 181 PQTVAETKKYIEEPEMKAPQTVVETEKCIEP-ETKASPIVVETENFIELLVEPEIEAPQT 240
            Q V +T+K IEE E KAP+ VVET+K +E  E K    VV+ E   E   E E++APQT
Sbjct: 181 LQIVVKTEKCIEEHETKAPRAVVETKKQVEEVEIKVPRTVVKPEKHAE---ESEVKAPQT 240

Query: 241 VVETENFI-------EPETKAPQTIVETEKHIEKAEIKVPQTVVELEKHKEEAEPAAPQT 300
            VETE  +       E E KAPQT VETEK    AE K+P+TVVE EKH EE+E  APQT
Sbjct: 241 EVETEKSVPAEKHAEESEVKAPQTEVETEKSEIPAE-KMPRTVVEPEKHAEESEVKAPQT 300

Query: 301 KVVIEKSEVPAEKVPITDVPTTSDIITEANVTVPSPSDITLISETPKEKTSEDIKLPEKV 360
           +V  EKSE+PAEK+PITDVPTTS  + +  VT+ SPS +  ISETP EKTSE++KLP+KV
Sbjct: 301 EVETEKSEIPAEKIPITDVPTTSATVPDEKVTITSPSHVKPISETPVEKTSENVKLPKKV 360

Query: 361 EKPEVVTLVEAIPGKEESTKIEQMKEDISNVEKIATGTPKEIEPKPAIPSETSTEPSQKI 416
           EKPE VTLVEA P K EST  EQ KEDISN+ K    T K          E STEP+QK 
Sbjct: 361 EKPEAVTLVEAAPEKHESTTSEQKKEDISNIGKTEMETTK----------ERSTEPAQKN 402

BLAST of Sed0016708 vs. NCBI nr
Match: KAG7035235.1 (FAZ1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 350.9 bits (899), Expect = 1.5e-92
Identity = 251/427 (58.78%), Postives = 289/427 (67.68%), Query Frame = 0

Query: 1   MGACASKPKVAGAKAPAPSPTPAPAPENKVEEKDVFVDAVVAFESDKKLEVTAEDIAGAG 60
           MGACA+KPKV   KA      PAP PE  V+EK VFVD V + E++K  E          
Sbjct: 1   MGACATKPKVDSRKA------PAPVPEKNVDEKHVFVDTVASVEAEKTFE---------E 60

Query: 61  NQSDKGKEVV----------VEHRSLSHLFKEKEGGGSIECEEPTGETETLKSKESERDT 120
           NQSDKGKEVV          V+ RSLS LFKEKEG   + CE P GETE L+S E+E+D 
Sbjct: 61  NQSDKGKEVVDDDDKVDDQSVKRRSLSRLFKEKEGVNQL-CEGPAGETEKLESIETEKDG 120

Query: 121 KEVETEILQTEVETKKGIEEPETKALQTVVETEKCIEEPETKVPQTVVETEKSVEEPETK 180
           KE  T++ QTEVET+K  +E  TK  QT VET+KC +EPETKVPQTVVETEK +EEPETK
Sbjct: 121 KESGTKVPQTEVETQKCTQESGTKVPQTEVETQKCTQEPETKVPQTVVETEKCIEEPETK 180

Query: 181 VPQTVAETKKYIEEPEMKAPQTVVETEKCIEP-ETKASPIVVETENFIELLVEPEIEAPQ 240
            PQTV ET+K IEEPE K  Q VV+TEKCIE  ETKA   VVETE  +E   E EI+ P+
Sbjct: 181 APQTVDETEKCIEEPETKGLQIVVKTEKCIEEHETKAPRAVVETEKQVE---EVEIKVPR 240

Query: 241 TVVETENFI-EPETKAPQTIVETEKHIEKAEIKVPQTVVELEKHKEEAEPAAPQTKVVIE 300
           TVVE E    E E KA QT VETEK    AE K+P+TVVE EKH EE+E  APQT+V  E
Sbjct: 241 TVVEPEKHAEESEVKALQTEVETEKSEIPAE-KMPRTVVEPEKHAEESEVKAPQTEVETE 300

Query: 301 KSEVPAEKVPITDVPTTSDIITEANVTVPSPSDITLISETPKEKTSEDIKLPEKVEKPEV 360
           KSE+PAEK+PITDVPTTS  + +  VT+ SPS +  ISETP EKTSE++KLP+KVEKPE 
Sbjct: 301 KSEIPAEKIPITDVPTTSATVPDEKVTITSPSHVETISETPVEKTSENVKLPKKVEKPEA 360

Query: 361 VTLVEAIPGKEESTKIEQMKEDISNVEKIATGTPKEIEPKPAIPSETSTEPSQKIEEVKV 416
           VTLVEA P K EST  EQ KEDISN+ K    T K          E STEP QK EE KV
Sbjct: 361 VTLVEATPEKHESTTSEQKKEDISNIGKTEMETTK----------ERSTEPVQKNEEAKV 397

BLAST of Sed0016708 vs. NCBI nr
Match: XP_022947031.1 (uncharacterized protein LOC111451030 isoform X1 [Cucurbita moschata])

HSP 1 Score: 346.7 bits (888), Expect = 2.8e-91
Identity = 251/434 (57.83%), Postives = 289/434 (66.59%), Query Frame = 0

Query: 1   MGACASKPKVAGAKAPAPSPTPAPAPENKVEEKDVFVDAVVAFESDKKLEVTAEDIAGAG 60
           MGACA+KPKV   KA      PAP PE  VEEKDVFVD V + E++K  E          
Sbjct: 1   MGACATKPKVDSGKA------PAPVPEKNVEEKDVFVDTVASVEAEKTFE---------E 60

Query: 61  NQSDKGKEVV----------VEHRSLSHLFKEKEGGGSIECEEPTGETETLKSKESERDT 120
           NQSDKGKEVV          V+ RSLS LFKEKEG   + CE P GETE L+S E+E+D 
Sbjct: 61  NQSDKGKEVVDDDDKVDDQSVKRRSLSRLFKEKEGVNQL-CEGPAGETEKLESIETEKDG 120

Query: 121 KEVETEILQTEVETKKGIEEPETKALQTVVETEKCIEEPETKVPQTVVETEKSVEEPETK 180
           KE  T++ QTEVET+K  +EPETK  QTVVETEKCIEEPETK PQTV ETEK +EEPETK
Sbjct: 121 KESGTKVPQTEVETQKCTQEPETKVPQTVVETEKCIEEPETKAPQTVDETEKCIEEPETK 180

Query: 181 VPQTVAETKKYIEEPEMKAPQTVVETEKCIEP-ETKASPIVVETENFIELLVEPEIEAPQ 240
             Q V +T+K IEE E KAP+ VVE EK +E  E K    VVE E   E   E E++APQ
Sbjct: 181 GLQIVVKTEKCIEEHETKAPRAVVEIEKQVEEVEIKVPRTVVEPEKNAE---ESEVKAPQ 240

Query: 241 TVVETE--------NFIEPETKAPQTIVETEKHIEKAEIKVPQTVVELEKHKEEAEPAAP 300
           T VETE        +  E E KAP+T VETEK    AE K+P+TVVE EKH EE+E  AP
Sbjct: 241 TEVETEKSEIPAEKHAEESEVKAPRTEVETEKSEIPAE-KMPRTVVESEKHAEESEVKAP 300

Query: 301 QTKVVIEKSEVPAEKVPITDVPTTSDIITEANVTVPSPSDITLISETPKEKTSEDIKLPE 360
           QT+V  EKSE+PAEK+PITDVPTTS  + +  VT+ SPSD+  ISETP EKTSE++KLP+
Sbjct: 301 QTEVETEKSEIPAEKIPITDVPTTSATVPDEKVTITSPSDVEPISETPVEKTSENVKLPK 360

Query: 361 KVEKPEVVTLVEAIPGKEESTKIEQMKEDISNVEKIATGTPKEIEPKPAIPSETSTEPSQ 416
           KVEKPE VTLVEA P K EST  EQ KEDISN+ K    T K          E STEP+Q
Sbjct: 361 KVEKPEAVTLVEATPEKHESTTSEQKKEDISNIGKTEMETTK----------ERSTEPAQ 404

BLAST of Sed0016708 vs. NCBI nr
Match: XP_023007404.1 (serine-aspartate repeat-containing protein I-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 339.7 bits (870), Expect = 3.5e-89
Identity = 241/425 (56.71%), Postives = 281/425 (66.12%), Query Frame = 0

Query: 1   MGACASKPKVAGAKAPAPSPTPAPAPENKVEEKDVFVDAVVAFESDKKLEVTAEDIAGAG 60
           MGACA+KPKV   K       PAP PE  VEEKDVFVD V   E++K  E          
Sbjct: 1   MGACATKPKVDSGK------VPAPVPEKNVEEKDVFVDTVAPVEAEKIFE---------E 60

Query: 61  NQSDKGKEVV---------VEHRSLSHLFKEKEGGGSIECEEPTGETETLKSKESERDTK 120
           NQSDKGKEVV         V+ RSLSHLFKEKEG   + CE P GETE L+SKE+E+D K
Sbjct: 61  NQSDKGKEVVDDDKVDDQSVKRRSLSHLFKEKEGVNQL-CEGPAGETEKLESKETEKDGK 120

Query: 121 EVETEILQTEVETKKGIEEPETKALQTVVETEKCIEEPETKVPQTVVETEKSVEEPETKV 180
           E  T++ QTEVET+K  +EPETK  QTVVETEKC+EEPETK PQTV ETEK +EEPETK 
Sbjct: 121 ESGTKVPQTEVETQKCTQEPETKVPQTVVETEKCVEEPETKAPQTVDETEKCIEEPETKG 180

Query: 181 PQTVAETKKYIEEPEMKAPQTVVETEKCIEPETKASPIVVETENFIELLVEPEIEAPQTV 240
            Q V +T+K IEE E KAP+ VVET+K +E                    E EI+ P+TV
Sbjct: 181 LQIVVKTEKCIEEHETKAPRAVVETKKQVE--------------------EVEIKVPRTV 240

Query: 241 VETENFI-EPETKAPQTIVETEKHIEKAEIKVPQTVVELEKHKEEAEPAAPQTKVVIEKS 300
           V+ E    E E KAPQT VETEK    AE K+P+TVVE EKH EE+E  APQT+V  EKS
Sbjct: 241 VKPEKHAEESEVKAPQTEVETEKSEIPAE-KMPRTVVEPEKHAEESEVKAPQTEVETEKS 300

Query: 301 EVPAEKVPITDVPTTSDIITEANVTVPSPSDITLISETPKEKTSEDIKLPEKVEKPEVVT 360
           E+PAEK+PITDVPTTS  + +  VT+ SPS +  ISETP EKTSE++KLP+KVEKPE VT
Sbjct: 301 EIPAEKIPITDVPTTSATVPDEKVTITSPSHVKPISETPVEKTSENVKLPKKVEKPEAVT 360

Query: 361 LVEAIPGKEESTKIEQMKEDISNVEKIATGTPKEIEPKPAIPSETSTEPSQKIEEVKVTA 416
           LVEA P K EST  EQ KEDISN+ K    T K          E STEP+QK +E KV++
Sbjct: 361 LVEAAPEKHESTTSEQKKEDISNIGKTEMETTK----------ERSTEPAQKNQEAKVSS 378

BLAST of Sed0016708 vs. NCBI nr
Match: XP_023532568.1 (uncharacterized protein LOC111794691 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327.4 bits (838), Expect = 1.8e-85
Identity = 237/432 (54.86%), Postives = 281/432 (65.05%), Query Frame = 0

Query: 1   MGACASKPKVAGAKAPAPSPTPAPAPENKVEEKDVFVDAVVAFESDKKLEVTAEDIAGAG 60
           MGACA+KPKV   KA      PAP PE  VEEKDVFVD V + E++K  E          
Sbjct: 1   MGACATKPKVDSGKA------PAPVPEKNVEEKDVFVDTVASVEAEKTFE---------E 60

Query: 61  NQSDKGKEVV---------VEHRSLSHLFKEKEGGGSIECEEPTGETETLKSKESERDTK 120
           NQ DKGKEVV         V+ RSLS LFKEKEG   + CE P GETE L+S E+E+D K
Sbjct: 61  NQRDKGKEVVDDDKVDDQSVKRRSLSRLFKEKEGVNQL-CERPAGETEKLESIETEKDGK 120

Query: 121 EVETEILQTEVETKKGIEEPETKALQTVVETEKCIEEPETKVPQTVVETEKSVEEPETKV 180
           E  T++ QTEVET+K  +EPETK  QTVVETEKCIEEPETK PQTV ETEK +EEPETK 
Sbjct: 121 ESGTKVPQTEVETQKCTQEPETKVPQTVVETEKCIEEPETKAPQTVDETEKCIEEPETKG 180

Query: 181 PQTVAETKKYIEEPEMKAPQTVVETEKCIEP-ETKASPIVVETENFIELLVEPEIEAPQT 240
            Q V +T+K IEE   KAP+ VVETEK +E  E K    VVE E   E   E E++AP+T
Sbjct: 181 LQIVVKTEKCIEEHLTKAPRAVVETEKQVEEVEIKVPRTVVEPEKHAE---ESEVKAPRT 240

Query: 241 VVETENFIEPETKAPQTIVETEKHIEKAEIKVPQTVVE-------LEKHKEEAEPAAPQT 300
            VETE          ++ +  EKH E++E+K PQT VE        EKH EE+E  AP+T
Sbjct: 241 EVETE----------KSEIPAEKHAEESEVKAPQTEVETKKSEIPAEKHAEESEVKAPRT 300

Query: 301 KVVIEKSEVPAEKVPITDVPTTSDIITEANVTVPSPSDITLISETPKEKTSEDIKLPEKV 360
           +V  EKSE+PAEK+ ITD PTTS  + +  VT+ SPSD+  ISETP EKTSE++KLP+KV
Sbjct: 301 EVETEKSEIPAEKILITDGPTTSATVPDEKVTITSPSDVEPISETPVEKTSENVKLPKKV 360

Query: 361 EKPEVVTLVEAIPGKEESTKIEQMKEDISNVEKIATGTPKEIEPKPAIPSETSTEPSQKI 416
           EKPE VTLVEA P K EST  EQ KEDISN+ K    T K          E STEP+QK 
Sbjct: 361 EKPEAVTLVEATPEKHESTTSEQKKEDISNIGKTEMETTK----------ERSTEPAQKN 393

BLAST of Sed0016708 vs. ExPASy TrEMBL
Match: A0A6J1L7K1 (neurofilament heavy polypeptide-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499910 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 7.3e-93
Identity = 249/432 (57.64%), Postives = 290/432 (67.13%), Query Frame = 0

Query: 1   MGACASKPKVAGAKAPAPSPTPAPAPENKVEEKDVFVDAVVAFESDKKLEVTAEDIAGAG 60
           MGACA+KPKV   K       PAP PE  VEEKDVFVD V   E++K  E          
Sbjct: 1   MGACATKPKVDSGK------VPAPVPEKNVEEKDVFVDTVAPVEAEKIFE---------E 60

Query: 61  NQSDKGKEVV---------VEHRSLSHLFKEKEGGGSIECEEPTGETETLKSKESERDTK 120
           NQSDKGKEVV         V+ RSLSHLFKEKEG   + CE P GETE L+SKE+E+D K
Sbjct: 61  NQSDKGKEVVDDDKVDDQSVKRRSLSHLFKEKEGVNQL-CEGPAGETEKLESKETEKDGK 120

Query: 121 EVETEILQTEVETKKGIEEPETKALQTVVETEKCIEEPETKVPQTVVETEKSVEEPETKV 180
           E  T++ QTEVET+K  +EPETK  QTVVETEKC+EEPETK PQTV ETEK +EEPETK 
Sbjct: 121 ESGTKVPQTEVETQKCTQEPETKVPQTVVETEKCVEEPETKAPQTVDETEKCIEEPETKG 180

Query: 181 PQTVAETKKYIEEPEMKAPQTVVETEKCIEP-ETKASPIVVETENFIELLVEPEIEAPQT 240
            Q V +T+K IEE E KAP+ VVET+K +E  E K    VV+ E   E   E E++APQT
Sbjct: 181 LQIVVKTEKCIEEHETKAPRAVVETKKQVEEVEIKVPRTVVKPEKHAE---ESEVKAPQT 240

Query: 241 VVETENFI-------EPETKAPQTIVETEKHIEKAEIKVPQTVVELEKHKEEAEPAAPQT 300
            VETE  +       E E KAPQT VETEK    AE K+P+TVVE EKH EE+E  APQT
Sbjct: 241 EVETEKSVPAEKHAEESEVKAPQTEVETEKSEIPAE-KMPRTVVEPEKHAEESEVKAPQT 300

Query: 301 KVVIEKSEVPAEKVPITDVPTTSDIITEANVTVPSPSDITLISETPKEKTSEDIKLPEKV 360
           +V  EKSE+PAEK+PITDVPTTS  + +  VT+ SPS +  ISETP EKTSE++KLP+KV
Sbjct: 301 EVETEKSEIPAEKIPITDVPTTSATVPDEKVTITSPSHVKPISETPVEKTSENVKLPKKV 360

Query: 361 EKPEVVTLVEAIPGKEESTKIEQMKEDISNVEKIATGTPKEIEPKPAIPSETSTEPSQKI 416
           EKPE VTLVEA P K EST  EQ KEDISN+ K    T K          E STEP+QK 
Sbjct: 361 EKPEAVTLVEAAPEKHESTTSEQKKEDISNIGKTEMETTK----------ERSTEPAQKN 402

BLAST of Sed0016708 vs. ExPASy TrEMBL
Match: A0A6J1G592 (uncharacterized protein LOC111451030 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451030 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 1.4e-91
Identity = 251/434 (57.83%), Postives = 289/434 (66.59%), Query Frame = 0

Query: 1   MGACASKPKVAGAKAPAPSPTPAPAPENKVEEKDVFVDAVVAFESDKKLEVTAEDIAGAG 60
           MGACA+KPKV   KA      PAP PE  VEEKDVFVD V + E++K  E          
Sbjct: 1   MGACATKPKVDSGKA------PAPVPEKNVEEKDVFVDTVASVEAEKTFE---------E 60

Query: 61  NQSDKGKEVV----------VEHRSLSHLFKEKEGGGSIECEEPTGETETLKSKESERDT 120
           NQSDKGKEVV          V+ RSLS LFKEKEG   + CE P GETE L+S E+E+D 
Sbjct: 61  NQSDKGKEVVDDDDKVDDQSVKRRSLSRLFKEKEGVNQL-CEGPAGETEKLESIETEKDG 120

Query: 121 KEVETEILQTEVETKKGIEEPETKALQTVVETEKCIEEPETKVPQTVVETEKSVEEPETK 180
           KE  T++ QTEVET+K  +EPETK  QTVVETEKCIEEPETK PQTV ETEK +EEPETK
Sbjct: 121 KESGTKVPQTEVETQKCTQEPETKVPQTVVETEKCIEEPETKAPQTVDETEKCIEEPETK 180

Query: 181 VPQTVAETKKYIEEPEMKAPQTVVETEKCIEP-ETKASPIVVETENFIELLVEPEIEAPQ 240
             Q V +T+K IEE E KAP+ VVE EK +E  E K    VVE E   E   E E++APQ
Sbjct: 181 GLQIVVKTEKCIEEHETKAPRAVVEIEKQVEEVEIKVPRTVVEPEKNAE---ESEVKAPQ 240

Query: 241 TVVETE--------NFIEPETKAPQTIVETEKHIEKAEIKVPQTVVELEKHKEEAEPAAP 300
           T VETE        +  E E KAP+T VETEK    AE K+P+TVVE EKH EE+E  AP
Sbjct: 241 TEVETEKSEIPAEKHAEESEVKAPRTEVETEKSEIPAE-KMPRTVVESEKHAEESEVKAP 300

Query: 301 QTKVVIEKSEVPAEKVPITDVPTTSDIITEANVTVPSPSDITLISETPKEKTSEDIKLPE 360
           QT+V  EKSE+PAEK+PITDVPTTS  + +  VT+ SPSD+  ISETP EKTSE++KLP+
Sbjct: 301 QTEVETEKSEIPAEKIPITDVPTTSATVPDEKVTITSPSDVEPISETPVEKTSENVKLPK 360

Query: 361 KVEKPEVVTLVEAIPGKEESTKIEQMKEDISNVEKIATGTPKEIEPKPAIPSETSTEPSQ 416
           KVEKPE VTLVEA P K EST  EQ KEDISN+ K    T K          E STEP+Q
Sbjct: 361 KVEKPEAVTLVEATPEKHESTTSEQKKEDISNIGKTEMETTK----------ERSTEPAQ 404

BLAST of Sed0016708 vs. ExPASy TrEMBL
Match: A0A6J1L4V0 (serine-aspartate repeat-containing protein I-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499910 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 1.7e-89
Identity = 241/425 (56.71%), Postives = 281/425 (66.12%), Query Frame = 0

Query: 1   MGACASKPKVAGAKAPAPSPTPAPAPENKVEEKDVFVDAVVAFESDKKLEVTAEDIAGAG 60
           MGACA+KPKV   K       PAP PE  VEEKDVFVD V   E++K  E          
Sbjct: 1   MGACATKPKVDSGK------VPAPVPEKNVEEKDVFVDTVAPVEAEKIFE---------E 60

Query: 61  NQSDKGKEVV---------VEHRSLSHLFKEKEGGGSIECEEPTGETETLKSKESERDTK 120
           NQSDKGKEVV         V+ RSLSHLFKEKEG   + CE P GETE L+SKE+E+D K
Sbjct: 61  NQSDKGKEVVDDDKVDDQSVKRRSLSHLFKEKEGVNQL-CEGPAGETEKLESKETEKDGK 120

Query: 121 EVETEILQTEVETKKGIEEPETKALQTVVETEKCIEEPETKVPQTVVETEKSVEEPETKV 180
           E  T++ QTEVET+K  +EPETK  QTVVETEKC+EEPETK PQTV ETEK +EEPETK 
Sbjct: 121 ESGTKVPQTEVETQKCTQEPETKVPQTVVETEKCVEEPETKAPQTVDETEKCIEEPETKG 180

Query: 181 PQTVAETKKYIEEPEMKAPQTVVETEKCIEPETKASPIVVETENFIELLVEPEIEAPQTV 240
            Q V +T+K IEE E KAP+ VVET+K +E                    E EI+ P+TV
Sbjct: 181 LQIVVKTEKCIEEHETKAPRAVVETKKQVE--------------------EVEIKVPRTV 240

Query: 241 VETENFI-EPETKAPQTIVETEKHIEKAEIKVPQTVVELEKHKEEAEPAAPQTKVVIEKS 300
           V+ E    E E KAPQT VETEK    AE K+P+TVVE EKH EE+E  APQT+V  EKS
Sbjct: 241 VKPEKHAEESEVKAPQTEVETEKSEIPAE-KMPRTVVEPEKHAEESEVKAPQTEVETEKS 300

Query: 301 EVPAEKVPITDVPTTSDIITEANVTVPSPSDITLISETPKEKTSEDIKLPEKVEKPEVVT 360
           E+PAEK+PITDVPTTS  + +  VT+ SPS +  ISETP EKTSE++KLP+KVEKPE VT
Sbjct: 301 EIPAEKIPITDVPTTSATVPDEKVTITSPSHVKPISETPVEKTSENVKLPKKVEKPEAVT 360

Query: 361 LVEAIPGKEESTKIEQMKEDISNVEKIATGTPKEIEPKPAIPSETSTEPSQKIEEVKVTA 416
           LVEA P K EST  EQ KEDISN+ K    T K          E STEP+QK +E KV++
Sbjct: 361 LVEAAPEKHESTTSEQKKEDISNIGKTEMETTK----------ERSTEPAQKNQEAKVSS 378

BLAST of Sed0016708 vs. ExPASy TrEMBL
Match: A0A6J1L2V7 (serine-aspartate repeat-containing protein I-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111499910 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 2.3e-83
Identity = 226/424 (53.30%), Postives = 263/424 (62.03%), Query Frame = 0

Query: 1   MGACASKPKVAGAKAPAPSPTPAPAPENKVEEKDVFVDAVVAFESDKKLEVTAEDIAGAG 60
           MGACA+KPKV   K       PAP PE  VEEKDVFVD V   E++K  E          
Sbjct: 1   MGACATKPKVDSGK------VPAPVPEKNVEEKDVFVDTVAPVEAEKIFE---------E 60

Query: 61  NQSDKGKEVV---------VEHRSLSHLFKEKEGGGSIECEEPTGETETLKSKESERDTK 120
           NQSDKGKEVV         V+ RSLSHLFKEKEG   + CE P GETE L+SKE+E+D K
Sbjct: 61  NQSDKGKEVVDDDKVDDQSVKRRSLSHLFKEKEGVNQL-CEGPAGETEKLESKETEKDGK 120

Query: 121 EVETEILQTEVETKKGIEEPETKALQTVVETEKCIEEPETKVPQTVVETEKSVEEPETKV 180
           E  T++ QTE                  VET+KC +EPETKVPQTVVETEK VEEPETK 
Sbjct: 121 ESGTKVPQTE------------------VETQKCTQEPETKVPQTVVETEKCVEEPETKA 180

Query: 181 PQTVAETKKYIEEPEMKAPQTVVETEKCIEPETKASPIVVETENFIELLVEPEIEAPQTV 240
           PQTV ET+K IEEPE K  Q VV+TEKCIE                              
Sbjct: 181 PQTVDETEKCIEEPETKGLQIVVKTEKCIE------------------------------ 240

Query: 241 VETENFIEPETKAPQTIVETEKHIEKAEIKVPQTVVELEKHKEEAEPAAPQTKVVIEKSE 300
                  E ETKAP+ +VET+K +E+ EIK+P+TVVE EKH EE+E  APQT+V  EKSE
Sbjct: 241 -------EHETKAPRAVVETKKQVEEVEIKMPRTVVEPEKHAEESEVKAPQTEVETEKSE 300

Query: 301 VPAEKVPITDVPTTSDIITEANVTVPSPSDITLISETPKEKTSEDIKLPEKVEKPEVVTL 360
           +PAEK+PITDVPTTS  + +  VT+ SPS +  ISETP EKTSE++KLP+KVEKPE VTL
Sbjct: 301 IPAEKIPITDVPTTSATVPDEKVTITSPSHVKPISETPVEKTSENVKLPKKVEKPEAVTL 343

Query: 361 VEAIPGKEESTKIEQMKEDISNVEKIATGTPKEIEPKPAIPSETSTEPSQKIEEVKVTAE 416
           VEA P K EST  EQ KEDISN+ K    T K          E STEP+QK +E KV++E
Sbjct: 361 VEAAPEKHESTTSEQKKEDISNIGKTEMETTK----------ERSTEPAQKNQEAKVSSE 343

BLAST of Sed0016708 vs. ExPASy TrEMBL
Match: A0A6J1L0F6 (serine-aspartate repeat-containing protein I-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111499910 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 3.1e-83
Identity = 226/424 (53.30%), Postives = 263/424 (62.03%), Query Frame = 0

Query: 1   MGACASKPKVAGAKAPAPSPTPAPAPENKVEEKDVFVDAVVAFESDKKLEVTAEDIAGAG 60
           MGACA+KPKV   K       PAP PE  VEEKDVFVD V   E++K  E          
Sbjct: 1   MGACATKPKVDSGK------VPAPVPEKNVEEKDVFVDTVAPVEAEKIFE---------E 60

Query: 61  NQSDKGKEVV---------VEHRSLSHLFKEKEGGGSIECEEPTGETETLKSKESERDTK 120
           NQSDKGKEVV         V+ RSLSHLFKEKEG   + CE P GETE L+SKE+E+D K
Sbjct: 61  NQSDKGKEVVDDDKVDDQSVKRRSLSHLFKEKEGVNQL-CEGPAGETEKLESKETEKDGK 120

Query: 121 EVETEILQTEVETKKGIEEPETKALQTVVETEKCIEEPETKVPQTVVETEKSVEEPETKV 180
           E  T++ QTE                  VET+KC +EPETKVPQTVVETEK VEEPETK 
Sbjct: 121 ESGTKVPQTE------------------VETQKCTQEPETKVPQTVVETEKCVEEPETKA 180

Query: 181 PQTVAETKKYIEEPEMKAPQTVVETEKCIEPETKASPIVVETENFIELLVEPEIEAPQTV 240
           PQTV ET+K IEEPE K  Q VV+TEKCIE                              
Sbjct: 181 PQTVDETEKCIEEPETKGLQIVVKTEKCIE------------------------------ 240

Query: 241 VETENFIEPETKAPQTIVETEKHIEKAEIKVPQTVVELEKHKEEAEPAAPQTKVVIEKSE 300
                  E ETKAP+ +VET+K +E+ EIKVP+TVV+ EKH EE+E  APQT+V  EKSE
Sbjct: 241 -------EHETKAPRAVVETKKQVEEVEIKVPRTVVKPEKHAEESEVKAPQTEVETEKSE 300

Query: 301 VPAEKVPITDVPTTSDIITEANVTVPSPSDITLISETPKEKTSEDIKLPEKVEKPEVVTL 360
           +PAEK+PITDVPTTS  + +  VT+ SPS +  ISETP EKTSE++KLP+KVEKPE VTL
Sbjct: 301 IPAEKIPITDVPTTSATVPDEKVTITSPSHVKPISETPVEKTSENVKLPKKVEKPEAVTL 343

Query: 361 VEAIPGKEESTKIEQMKEDISNVEKIATGTPKEIEPKPAIPSETSTEPSQKIEEVKVTAE 416
           VEA P K EST  EQ KEDISN+ K    T K          E STEP+QK +E KV++E
Sbjct: 361 VEAAPEKHESTTSEQKKEDISNIGKTEMETTK----------ERSTEPAQKNQEAKVSSE 343

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023007403.11.5e-9257.64neurofilament heavy polypeptide-like isoform X1 [Cucurbita maxima][more]
KAG7035235.11.5e-9258.78FAZ1 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022947031.12.8e-9157.83uncharacterized protein LOC111451030 isoform X1 [Cucurbita moschata][more]
XP_023007404.13.5e-8956.71serine-aspartate repeat-containing protein I-like isoform X2 [Cucurbita maxima][more]
XP_023532568.11.8e-8554.86uncharacterized protein LOC111794691 isoform X1 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1L7K17.3e-9357.64neurofilament heavy polypeptide-like isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1G5921.4e-9157.83uncharacterized protein LOC111451030 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1L4V01.7e-8956.71serine-aspartate repeat-containing protein I-like isoform X2 OS=Cucurbita maxima... [more]
A0A6J1L2V72.3e-8353.30serine-aspartate repeat-containing protein I-like isoform X3 OS=Cucurbita maxima... [more]
A0A6J1L0F63.1e-8353.30serine-aspartate repeat-containing protein I-like isoform X4 OS=Cucurbita maxima... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 255..275
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 372..415
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 400..415

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0016708.1Sed0016708.1mRNA