Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGCCTGTGCGTCTAAGCCGAAGGTCGCCGGTGCCAAGGCTCCCGCTCCGTCTCCGACTCCGGCGCCGGCGCCGGAGAATAAGGTGGAGGAGAAGGATGTTTTCGTTGACGCCGTGGTCGCTTTTGAATCTGATAAGAAACTCGAGGTCACGGCGGAGGATATCGCCGGAGCGGGGAACCAGAGCGATAAAGGCAAGGAAGTTGTTGTTGAACATCGCTCTCTTAGCCACTTGTTTAAGGAGGTAATTTCTTCCATTTGGTTTCTAATTTTCTTGTGATTATCGATGGCTTATCAGTCTTCGAGTTTCTATTGAAAATCCGATCCAAATTTCAGTACAAATTAGGAATTCGTTGTTATTCGTTTTTAGGTTTATGAACTCGTTGAAATCATTTTCTCGCTCTACGTTGTTTGTTGATTGAACTGGATAATTGTGCCGATTGATTTTGTTATTAGGGTTCTCAGCTGATTGATTTTGCCATTCTCGAGAAAAATTTGGGAGACGAAGTATAAAAAAATTGAAGAAAATGTTATTGATATTGATACCTCCTCGTGTTTCTCGATTTGACAAACTTCATATGAACATGCTGTTGCTTTTTTATTATAGCTTATGTATATTTTCTTTTGGAACTTACAAGCTTGTTTGCGAATCTCGGCAGTTACCGGAGAGAAATACTTGCCTCCTTATGATTAAGAACGTGGGAATTTCTCGTTCCCATGAACCAAACCAAAAAGATTTGTTTACTCTTTTCGAGAAAGAAACTTTTATCCTCTTTTGGACGTAAAGCGAAATCAACGGTCCTCCCAAAGGTAAAAAGTGATATAAGGAAATGAAATTATATTTTCCAAAGTAGACCAGTAAGTTCTTCATAATTTATGATTTGTCGGTTCAATCTTTGAAGAACTTTGTTACCTCATTTCCAAGGGTCCCCTTTTCAATTCAAGAACTCTGTTTGATTGAACGTTTGGATGTATAATATGCATCAGCATTTGAGAGGCTTCATCATTTAAGTCCGAATCTCATTTGGAATCAATTCACGGAATCTTTCTCATTCCACAATACATTCGTTTGGTGACAAACAAAAGGGTCTTTCCTTGGAGGGACCCCCTTTTTTCCTTCCTCTTTCTTCTGTTGTTTCTGCTCATGTCTTGCCTCCATCCTGTGAATGTTTTATGGCTCATGGAACTTTACTTGTTTGTCTGCACCTTAAAGAAGTTTCTTTCATTCCCATGTGATCTTGAAGGATTGATGCATTTTTCACCCACACGTTCGGTTATGAGATGCCCCCGGGGCCCTAGTTACATTGCACTGTCCTTTAATTGGGGAAACGCCGATTGGCTTAAAGTTTGTGTTGGGAATGGGATGCAAACAAATAATCCCACATTGGTTAGATAAGAGAAGGATCATAAGTGTATAAGTGATGACAACAATTTCTATTGATATGAGGTCCTTATCAGTTCGATTTGTAGAATATGCTTATATAGCTGTCCTTAGGATCGGGATCTGGATCAGGGGTGGAGCTAGAAATTTTCATGAACCGCCCCTCTTTGTGCCTCACGTTTTCTTGGCCCGACCCAGCAGGTAGCCTGGTTGGCATGTAGTATTTTGTTGAACGATCATTTGCTTTGAAAAAGACTGTTCATCAATGTGATCTTCATTGGCCTAGTGGTGGGTGCCCAAATTGATTGTCTAGATAAATGAGATGAGTGTATTCATAAATGGTTAGCTTAGCTAAGCTGTAGCAGTGTTTTGAAATTGTCGGTTTGAACTGCTTCCAATTATGAGACACAAAGTTTGGTTTGATCTATTCACTACACAAATCAATTTTGTAGTGTAAAATATCATATGACAGCTTAAAGTTTCTTCGCATATTCTAATTCTTCCTTCATTATCAACTAAAATTGTTGTTTTGAACATAAATTCTGAATATTATGCAGAAAGAAGGGGGTGGATCAATTGAATGTGAGGAGCCAACAGGGGAAACAGAGACACTGAAGTCTAAAGAGAGTGAAAGAGATACGAAAGAAGTTGAGACAGAGATCCTTCAAACTGAAGTAGAAACCAAAAAAGGCATAGAAGAACCCGAGACAAAAGCGCTTCAAACTGTAGTTGAAACCGAAAAATGCATAGAAGAACCCGAGACAAAGGTGCCTCAAACTGTAGTTGAAACCGAAAAAAGCGTAGAAGAACCTGAGACAAAGGTGCCTCAAACTGTAGCTGAAACCAAAAAATACATAGAAGAACCCGAGATGAAGGCGCCTCAAACTGTAGTTGAAACTGAGAAATGCATAGAACCCGAGACAAAGGCATCTCCAATTGTAGTTGAAACCGAAAATTTTATTGAACTTTTAGTAGAACCCGAGATTGAGGCACCTCAAACTGTAGTTGAAACCGAAAATTTTATTGAACCTGAAACAAAGGCACCACAAACTATAGTAGAAACCGAAAAACATATAGAAAAAGCTGAGATAAAGGTACCTCAAACTGTAGTAGAGCTTGAGAAACATAAAGAAGAAGCTGAACCAGCGGCACCTCAAACCAAAGTAGTGATCGAAAAATCTGAAGTTCCAGCTGAAAAGGTTCCGATCACTGATGTTCCTACAACTTCTGATATCATTACTGAGGCAAACGTAACTGTGCCTTCACCATCTGATATTACGCTGATAAGTGAAACACCCAAGGAAAAGACATCGGAGGACATAAAATTGCCCGAAAAAGTCGAGAAACCTGAGGTAGTGACATTAGTTGAAGCTATACCAGGAAAAGAAGAGAGTACAAAAATCGAGCAGATGAAAGAAGATATCAGCAATGTCGAGAAGATCGCAACAGGGACACCGAAAGAAATCGAGCCAAAACCCGCAATTCCATCTGAAACAAGTACTGAACCGTCGCAGAAAATCGAAGAAGTGAAGGTAACGGCTGAAGAAAAAGCAAGTTGATGAAAAGTGTGGCATATTTAAGTTGAAGTATAGAAAGTAAAAAGAAAATGCTTTCTTCTTTGCTGTTTAAACTTATTCAGTGGGAGAAACTTTGCCTAAAGAAGAAGTGGCTGCAGTCTGCCATTATCAAGGTTAGATTTGTTATGTGGTTTTTCAAGGCAACTTCTTAAGATGCTCAGTTTCTTTTGTTTTGCTGTATATCATTTGTTGGTTTATCATTAAGTTGCACACTGTCTTTTTTTTGCTTTGCATGTAGACATATGGGTTTGTCAGATTAATATGAATATAAAATGTTCTCCTTACAATGTGAAATTTACAATTCTTCATCA
mRNA sequence
ATGGGAGCCTGTGCGTCTAAGCCGAAGGTCGCCGGTGCCAAGGCTCCCGCTCCGTCTCCGACTCCGGCGCCGGCGCCGGAGAATAAGGTGGAGGAGAAGGATGTTTTCGTTGACGCCGTGGTCGCTTTTGAATCTGATAAGAAACTCGAGGTCACGGCGGAGGATATCGCCGGAGCGGGGAACCAGAGCGATAAAGGCAAGGAAGTTGTTGTTGAACATCGCTCTCTTAGCCACTTGTTTAAGGAGAAAGAAGGGGGTGGATCAATTGAATGTGAGGAGCCAACAGGGGAAACAGAGACACTGAAGTCTAAAGAGAGTGAAAGAGATACGAAAGAAGTTGAGACAGAGATCCTTCAAACTGAAGTAGAAACCAAAAAAGGCATAGAAGAACCCGAGACAAAAGCGCTTCAAACTGTAGTTGAAACCGAAAAATGCATAGAAGAACCCGAGACAAAGGTGCCTCAAACTGTAGTTGAAACCGAAAAAAGCGTAGAAGAACCTGAGACAAAGGTGCCTCAAACTGTAGCTGAAACCAAAAAATACATAGAAGAACCCGAGATGAAGGCGCCTCAAACTGTAGTTGAAACTGAGAAATGCATAGAACCCGAGACAAAGGCATCTCCAATTGTAGTTGAAACCGAAAATTTTATTGAACTTTTAGTAGAACCCGAGATTGAGGCACCTCAAACTGTAGTTGAAACCGAAAATTTTATTGAACCTGAAACAAAGGCACCACAAACTATAGTAGAAACCGAAAAACATATAGAAAAAGCTGAGATAAAGGTACCTCAAACTGTAGTAGAGCTTGAGAAACATAAAGAAGAAGCTGAACCAGCGGCACCTCAAACCAAAGTAGTGATCGAAAAATCTGAAGTTCCAGCTGAAAAGGTTCCGATCACTGATGTTCCTACAACTTCTGATATCATTACTGAGGCAAACGTAACTGTGCCTTCACCATCTGATATTACGCTGATAAGTGAAACACCCAAGGAAAAGACATCGGAGGACATAAAATTGCCCGAAAAAGTCGAGAAACCTGAGGTAGTGACATTAGTTGAAGCTATACCAGGAAAAGAAGAGAGTACAAAAATCGAGCAGATGAAAGAAGATATCAGCAATGTCGAGAAGATCGCAACAGGGACACCGAAAGAAATCGAGCCAAAACCCGCAATTCCATCTGAAACAAGTACTGAACCGTCGCAGAAAATCGAAGAAGTGAAGGTAACGGCTGAAGAAAAAGCAAGTTGATGAAAAGTGTGGCATATTTAAGTTGAAGTATAGAAAGTAAAAAGAAAATGCTTTCTTCTTTGCTGTTTAAACTTATTCAGTGGGAGAAACTTTGCCTAAAGAAGAAGTGGCTGCAGTCTGCCATTATCAAGGTTAGATTTGTTATGTGGTTTTTCAAGGCAACTTCTTAAGATGCTCAGTTTCTTTTGTTTTGCTGTATATCATTTGTTGGTTTATCATTAAGTTGCACACTGTCTTTTTTTTGCTTTGCATGTAGACATATGGGTTTGTCAGATTAATATGAATATAAAATGTTCTCCTTACAATGTGAAATTTACAATTCTTCATCA
Coding sequence (CDS)
ATGGGAGCCTGTGCGTCTAAGCCGAAGGTCGCCGGTGCCAAGGCTCCCGCTCCGTCTCCGACTCCGGCGCCGGCGCCGGAGAATAAGGTGGAGGAGAAGGATGTTTTCGTTGACGCCGTGGTCGCTTTTGAATCTGATAAGAAACTCGAGGTCACGGCGGAGGATATCGCCGGAGCGGGGAACCAGAGCGATAAAGGCAAGGAAGTTGTTGTTGAACATCGCTCTCTTAGCCACTTGTTTAAGGAGAAAGAAGGGGGTGGATCAATTGAATGTGAGGAGCCAACAGGGGAAACAGAGACACTGAAGTCTAAAGAGAGTGAAAGAGATACGAAAGAAGTTGAGACAGAGATCCTTCAAACTGAAGTAGAAACCAAAAAAGGCATAGAAGAACCCGAGACAAAAGCGCTTCAAACTGTAGTTGAAACCGAAAAATGCATAGAAGAACCCGAGACAAAGGTGCCTCAAACTGTAGTTGAAACCGAAAAAAGCGTAGAAGAACCTGAGACAAAGGTGCCTCAAACTGTAGCTGAAACCAAAAAATACATAGAAGAACCCGAGATGAAGGCGCCTCAAACTGTAGTTGAAACTGAGAAATGCATAGAACCCGAGACAAAGGCATCTCCAATTGTAGTTGAAACCGAAAATTTTATTGAACTTTTAGTAGAACCCGAGATTGAGGCACCTCAAACTGTAGTTGAAACCGAAAATTTTATTGAACCTGAAACAAAGGCACCACAAACTATAGTAGAAACCGAAAAACATATAGAAAAAGCTGAGATAAAGGTACCTCAAACTGTAGTAGAGCTTGAGAAACATAAAGAAGAAGCTGAACCAGCGGCACCTCAAACCAAAGTAGTGATCGAAAAATCTGAAGTTCCAGCTGAAAAGGTTCCGATCACTGATGTTCCTACAACTTCTGATATCATTACTGAGGCAAACGTAACTGTGCCTTCACCATCTGATATTACGCTGATAAGTGAAACACCCAAGGAAAAGACATCGGAGGACATAAAATTGCCCGAAAAAGTCGAGAAACCTGAGGTAGTGACATTAGTTGAAGCTATACCAGGAAAAGAAGAGAGTACAAAAATCGAGCAGATGAAAGAAGATATCAGCAATGTCGAGAAGATCGCAACAGGGACACCGAAAGAAATCGAGCCAAAACCCGCAATTCCATCTGAAACAAGTACTGAACCGTCGCAGAAAATCGAAGAAGTGAAGGTAACGGCTGAAGAAAAAGCAAGTTGA
Protein sequence
MGACASKPKVAGAKAPAPSPTPAPAPENKVEEKDVFVDAVVAFESDKKLEVTAEDIAGAGNQSDKGKEVVVEHRSLSHLFKEKEGGGSIECEEPTGETETLKSKESERDTKEVETEILQTEVETKKGIEEPETKALQTVVETEKCIEEPETKVPQTVVETEKSVEEPETKVPQTVAETKKYIEEPEMKAPQTVVETEKCIEPETKASPIVVETENFIELLVEPEIEAPQTVVETENFIEPETKAPQTIVETEKHIEKAEIKVPQTVVELEKHKEEAEPAAPQTKVVIEKSEVPAEKVPITDVPTTSDIITEANVTVPSPSDITLISETPKEKTSEDIKLPEKVEKPEVVTLVEAIPGKEESTKIEQMKEDISNVEKIATGTPKEIEPKPAIPSETSTEPSQKIEEVKVTAEEKAS
Homology
BLAST of Sed0016708 vs. NCBI nr
Match:
XP_023007403.1 (neurofilament heavy polypeptide-like isoform X1 [Cucurbita maxima])
HSP 1 Score: 350.9 bits (899), Expect = 1.5e-92
Identity = 249/432 (57.64%), Postives = 290/432 (67.13%), Query Frame = 0
Query: 1 MGACASKPKVAGAKAPAPSPTPAPAPENKVEEKDVFVDAVVAFESDKKLEVTAEDIAGAG 60
MGACA+KPKV K PAP PE VEEKDVFVD V E++K E
Sbjct: 1 MGACATKPKVDSGK------VPAPVPEKNVEEKDVFVDTVAPVEAEKIFE---------E 60
Query: 61 NQSDKGKEVV---------VEHRSLSHLFKEKEGGGSIECEEPTGETETLKSKESERDTK 120
NQSDKGKEVV V+ RSLSHLFKEKEG + CE P GETE L+SKE+E+D K
Sbjct: 61 NQSDKGKEVVDDDKVDDQSVKRRSLSHLFKEKEGVNQL-CEGPAGETEKLESKETEKDGK 120
Query: 121 EVETEILQTEVETKKGIEEPETKALQTVVETEKCIEEPETKVPQTVVETEKSVEEPETKV 180
E T++ QTEVET+K +EPETK QTVVETEKC+EEPETK PQTV ETEK +EEPETK
Sbjct: 121 ESGTKVPQTEVETQKCTQEPETKVPQTVVETEKCVEEPETKAPQTVDETEKCIEEPETKG 180
Query: 181 PQTVAETKKYIEEPEMKAPQTVVETEKCIEP-ETKASPIVVETENFIELLVEPEIEAPQT 240
Q V +T+K IEE E KAP+ VVET+K +E E K VV+ E E E E++APQT
Sbjct: 181 LQIVVKTEKCIEEHETKAPRAVVETKKQVEEVEIKVPRTVVKPEKHAE---ESEVKAPQT 240
Query: 241 VVETENFI-------EPETKAPQTIVETEKHIEKAEIKVPQTVVELEKHKEEAEPAAPQT 300
VETE + E E KAPQT VETEK AE K+P+TVVE EKH EE+E APQT
Sbjct: 241 EVETEKSVPAEKHAEESEVKAPQTEVETEKSEIPAE-KMPRTVVEPEKHAEESEVKAPQT 300
Query: 301 KVVIEKSEVPAEKVPITDVPTTSDIITEANVTVPSPSDITLISETPKEKTSEDIKLPEKV 360
+V EKSE+PAEK+PITDVPTTS + + VT+ SPS + ISETP EKTSE++KLP+KV
Sbjct: 301 EVETEKSEIPAEKIPITDVPTTSATVPDEKVTITSPSHVKPISETPVEKTSENVKLPKKV 360
Query: 361 EKPEVVTLVEAIPGKEESTKIEQMKEDISNVEKIATGTPKEIEPKPAIPSETSTEPSQKI 416
EKPE VTLVEA P K EST EQ KEDISN+ K T K E STEP+QK
Sbjct: 361 EKPEAVTLVEAAPEKHESTTSEQKKEDISNIGKTEMETTK----------ERSTEPAQKN 402
BLAST of Sed0016708 vs. NCBI nr
Match:
KAG7035235.1 (FAZ1 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 350.9 bits (899), Expect = 1.5e-92
Identity = 251/427 (58.78%), Postives = 289/427 (67.68%), Query Frame = 0
Query: 1 MGACASKPKVAGAKAPAPSPTPAPAPENKVEEKDVFVDAVVAFESDKKLEVTAEDIAGAG 60
MGACA+KPKV KA PAP PE V+EK VFVD V + E++K E
Sbjct: 1 MGACATKPKVDSRKA------PAPVPEKNVDEKHVFVDTVASVEAEKTFE---------E 60
Query: 61 NQSDKGKEVV----------VEHRSLSHLFKEKEGGGSIECEEPTGETETLKSKESERDT 120
NQSDKGKEVV V+ RSLS LFKEKEG + CE P GETE L+S E+E+D
Sbjct: 61 NQSDKGKEVVDDDDKVDDQSVKRRSLSRLFKEKEGVNQL-CEGPAGETEKLESIETEKDG 120
Query: 121 KEVETEILQTEVETKKGIEEPETKALQTVVETEKCIEEPETKVPQTVVETEKSVEEPETK 180
KE T++ QTEVET+K +E TK QT VET+KC +EPETKVPQTVVETEK +EEPETK
Sbjct: 121 KESGTKVPQTEVETQKCTQESGTKVPQTEVETQKCTQEPETKVPQTVVETEKCIEEPETK 180
Query: 181 VPQTVAETKKYIEEPEMKAPQTVVETEKCIEP-ETKASPIVVETENFIELLVEPEIEAPQ 240
PQTV ET+K IEEPE K Q VV+TEKCIE ETKA VVETE +E E EI+ P+
Sbjct: 181 APQTVDETEKCIEEPETKGLQIVVKTEKCIEEHETKAPRAVVETEKQVE---EVEIKVPR 240
Query: 241 TVVETENFI-EPETKAPQTIVETEKHIEKAEIKVPQTVVELEKHKEEAEPAAPQTKVVIE 300
TVVE E E E KA QT VETEK AE K+P+TVVE EKH EE+E APQT+V E
Sbjct: 241 TVVEPEKHAEESEVKALQTEVETEKSEIPAE-KMPRTVVEPEKHAEESEVKAPQTEVETE 300
Query: 301 KSEVPAEKVPITDVPTTSDIITEANVTVPSPSDITLISETPKEKTSEDIKLPEKVEKPEV 360
KSE+PAEK+PITDVPTTS + + VT+ SPS + ISETP EKTSE++KLP+KVEKPE
Sbjct: 301 KSEIPAEKIPITDVPTTSATVPDEKVTITSPSHVETISETPVEKTSENVKLPKKVEKPEA 360
Query: 361 VTLVEAIPGKEESTKIEQMKEDISNVEKIATGTPKEIEPKPAIPSETSTEPSQKIEEVKV 416
VTLVEA P K EST EQ KEDISN+ K T K E STEP QK EE KV
Sbjct: 361 VTLVEATPEKHESTTSEQKKEDISNIGKTEMETTK----------ERSTEPVQKNEEAKV 397
BLAST of Sed0016708 vs. NCBI nr
Match:
XP_022947031.1 (uncharacterized protein LOC111451030 isoform X1 [Cucurbita moschata])
HSP 1 Score: 346.7 bits (888), Expect = 2.8e-91
Identity = 251/434 (57.83%), Postives = 289/434 (66.59%), Query Frame = 0
Query: 1 MGACASKPKVAGAKAPAPSPTPAPAPENKVEEKDVFVDAVVAFESDKKLEVTAEDIAGAG 60
MGACA+KPKV KA PAP PE VEEKDVFVD V + E++K E
Sbjct: 1 MGACATKPKVDSGKA------PAPVPEKNVEEKDVFVDTVASVEAEKTFE---------E 60
Query: 61 NQSDKGKEVV----------VEHRSLSHLFKEKEGGGSIECEEPTGETETLKSKESERDT 120
NQSDKGKEVV V+ RSLS LFKEKEG + CE P GETE L+S E+E+D
Sbjct: 61 NQSDKGKEVVDDDDKVDDQSVKRRSLSRLFKEKEGVNQL-CEGPAGETEKLESIETEKDG 120
Query: 121 KEVETEILQTEVETKKGIEEPETKALQTVVETEKCIEEPETKVPQTVVETEKSVEEPETK 180
KE T++ QTEVET+K +EPETK QTVVETEKCIEEPETK PQTV ETEK +EEPETK
Sbjct: 121 KESGTKVPQTEVETQKCTQEPETKVPQTVVETEKCIEEPETKAPQTVDETEKCIEEPETK 180
Query: 181 VPQTVAETKKYIEEPEMKAPQTVVETEKCIEP-ETKASPIVVETENFIELLVEPEIEAPQ 240
Q V +T+K IEE E KAP+ VVE EK +E E K VVE E E E E++APQ
Sbjct: 181 GLQIVVKTEKCIEEHETKAPRAVVEIEKQVEEVEIKVPRTVVEPEKNAE---ESEVKAPQ 240
Query: 241 TVVETE--------NFIEPETKAPQTIVETEKHIEKAEIKVPQTVVELEKHKEEAEPAAP 300
T VETE + E E KAP+T VETEK AE K+P+TVVE EKH EE+E AP
Sbjct: 241 TEVETEKSEIPAEKHAEESEVKAPRTEVETEKSEIPAE-KMPRTVVESEKHAEESEVKAP 300
Query: 301 QTKVVIEKSEVPAEKVPITDVPTTSDIITEANVTVPSPSDITLISETPKEKTSEDIKLPE 360
QT+V EKSE+PAEK+PITDVPTTS + + VT+ SPSD+ ISETP EKTSE++KLP+
Sbjct: 301 QTEVETEKSEIPAEKIPITDVPTTSATVPDEKVTITSPSDVEPISETPVEKTSENVKLPK 360
Query: 361 KVEKPEVVTLVEAIPGKEESTKIEQMKEDISNVEKIATGTPKEIEPKPAIPSETSTEPSQ 416
KVEKPE VTLVEA P K EST EQ KEDISN+ K T K E STEP+Q
Sbjct: 361 KVEKPEAVTLVEATPEKHESTTSEQKKEDISNIGKTEMETTK----------ERSTEPAQ 404
BLAST of Sed0016708 vs. NCBI nr
Match:
XP_023007404.1 (serine-aspartate repeat-containing protein I-like isoform X2 [Cucurbita maxima])
HSP 1 Score: 339.7 bits (870), Expect = 3.5e-89
Identity = 241/425 (56.71%), Postives = 281/425 (66.12%), Query Frame = 0
Query: 1 MGACASKPKVAGAKAPAPSPTPAPAPENKVEEKDVFVDAVVAFESDKKLEVTAEDIAGAG 60
MGACA+KPKV K PAP PE VEEKDVFVD V E++K E
Sbjct: 1 MGACATKPKVDSGK------VPAPVPEKNVEEKDVFVDTVAPVEAEKIFE---------E 60
Query: 61 NQSDKGKEVV---------VEHRSLSHLFKEKEGGGSIECEEPTGETETLKSKESERDTK 120
NQSDKGKEVV V+ RSLSHLFKEKEG + CE P GETE L+SKE+E+D K
Sbjct: 61 NQSDKGKEVVDDDKVDDQSVKRRSLSHLFKEKEGVNQL-CEGPAGETEKLESKETEKDGK 120
Query: 121 EVETEILQTEVETKKGIEEPETKALQTVVETEKCIEEPETKVPQTVVETEKSVEEPETKV 180
E T++ QTEVET+K +EPETK QTVVETEKC+EEPETK PQTV ETEK +EEPETK
Sbjct: 121 ESGTKVPQTEVETQKCTQEPETKVPQTVVETEKCVEEPETKAPQTVDETEKCIEEPETKG 180
Query: 181 PQTVAETKKYIEEPEMKAPQTVVETEKCIEPETKASPIVVETENFIELLVEPEIEAPQTV 240
Q V +T+K IEE E KAP+ VVET+K +E E EI+ P+TV
Sbjct: 181 LQIVVKTEKCIEEHETKAPRAVVETKKQVE--------------------EVEIKVPRTV 240
Query: 241 VETENFI-EPETKAPQTIVETEKHIEKAEIKVPQTVVELEKHKEEAEPAAPQTKVVIEKS 300
V+ E E E KAPQT VETEK AE K+P+TVVE EKH EE+E APQT+V EKS
Sbjct: 241 VKPEKHAEESEVKAPQTEVETEKSEIPAE-KMPRTVVEPEKHAEESEVKAPQTEVETEKS 300
Query: 301 EVPAEKVPITDVPTTSDIITEANVTVPSPSDITLISETPKEKTSEDIKLPEKVEKPEVVT 360
E+PAEK+PITDVPTTS + + VT+ SPS + ISETP EKTSE++KLP+KVEKPE VT
Sbjct: 301 EIPAEKIPITDVPTTSATVPDEKVTITSPSHVKPISETPVEKTSENVKLPKKVEKPEAVT 360
Query: 361 LVEAIPGKEESTKIEQMKEDISNVEKIATGTPKEIEPKPAIPSETSTEPSQKIEEVKVTA 416
LVEA P K EST EQ KEDISN+ K T K E STEP+QK +E KV++
Sbjct: 361 LVEAAPEKHESTTSEQKKEDISNIGKTEMETTK----------ERSTEPAQKNQEAKVSS 378
BLAST of Sed0016708 vs. NCBI nr
Match:
XP_023532568.1 (uncharacterized protein LOC111794691 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 327.4 bits (838), Expect = 1.8e-85
Identity = 237/432 (54.86%), Postives = 281/432 (65.05%), Query Frame = 0
Query: 1 MGACASKPKVAGAKAPAPSPTPAPAPENKVEEKDVFVDAVVAFESDKKLEVTAEDIAGAG 60
MGACA+KPKV KA PAP PE VEEKDVFVD V + E++K E
Sbjct: 1 MGACATKPKVDSGKA------PAPVPEKNVEEKDVFVDTVASVEAEKTFE---------E 60
Query: 61 NQSDKGKEVV---------VEHRSLSHLFKEKEGGGSIECEEPTGETETLKSKESERDTK 120
NQ DKGKEVV V+ RSLS LFKEKEG + CE P GETE L+S E+E+D K
Sbjct: 61 NQRDKGKEVVDDDKVDDQSVKRRSLSRLFKEKEGVNQL-CERPAGETEKLESIETEKDGK 120
Query: 121 EVETEILQTEVETKKGIEEPETKALQTVVETEKCIEEPETKVPQTVVETEKSVEEPETKV 180
E T++ QTEVET+K +EPETK QTVVETEKCIEEPETK PQTV ETEK +EEPETK
Sbjct: 121 ESGTKVPQTEVETQKCTQEPETKVPQTVVETEKCIEEPETKAPQTVDETEKCIEEPETKG 180
Query: 181 PQTVAETKKYIEEPEMKAPQTVVETEKCIEP-ETKASPIVVETENFIELLVEPEIEAPQT 240
Q V +T+K IEE KAP+ VVETEK +E E K VVE E E E E++AP+T
Sbjct: 181 LQIVVKTEKCIEEHLTKAPRAVVETEKQVEEVEIKVPRTVVEPEKHAE---ESEVKAPRT 240
Query: 241 VVETENFIEPETKAPQTIVETEKHIEKAEIKVPQTVVE-------LEKHKEEAEPAAPQT 300
VETE ++ + EKH E++E+K PQT VE EKH EE+E AP+T
Sbjct: 241 EVETE----------KSEIPAEKHAEESEVKAPQTEVETKKSEIPAEKHAEESEVKAPRT 300
Query: 301 KVVIEKSEVPAEKVPITDVPTTSDIITEANVTVPSPSDITLISETPKEKTSEDIKLPEKV 360
+V EKSE+PAEK+ ITD PTTS + + VT+ SPSD+ ISETP EKTSE++KLP+KV
Sbjct: 301 EVETEKSEIPAEKILITDGPTTSATVPDEKVTITSPSDVEPISETPVEKTSENVKLPKKV 360
Query: 361 EKPEVVTLVEAIPGKEESTKIEQMKEDISNVEKIATGTPKEIEPKPAIPSETSTEPSQKI 416
EKPE VTLVEA P K EST EQ KEDISN+ K T K E STEP+QK
Sbjct: 361 EKPEAVTLVEATPEKHESTTSEQKKEDISNIGKTEMETTK----------ERSTEPAQKN 393
BLAST of Sed0016708 vs. ExPASy TrEMBL
Match:
A0A6J1L7K1 (neurofilament heavy polypeptide-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499910 PE=4 SV=1)
HSP 1 Score: 350.9 bits (899), Expect = 7.3e-93
Identity = 249/432 (57.64%), Postives = 290/432 (67.13%), Query Frame = 0
Query: 1 MGACASKPKVAGAKAPAPSPTPAPAPENKVEEKDVFVDAVVAFESDKKLEVTAEDIAGAG 60
MGACA+KPKV K PAP PE VEEKDVFVD V E++K E
Sbjct: 1 MGACATKPKVDSGK------VPAPVPEKNVEEKDVFVDTVAPVEAEKIFE---------E 60
Query: 61 NQSDKGKEVV---------VEHRSLSHLFKEKEGGGSIECEEPTGETETLKSKESERDTK 120
NQSDKGKEVV V+ RSLSHLFKEKEG + CE P GETE L+SKE+E+D K
Sbjct: 61 NQSDKGKEVVDDDKVDDQSVKRRSLSHLFKEKEGVNQL-CEGPAGETEKLESKETEKDGK 120
Query: 121 EVETEILQTEVETKKGIEEPETKALQTVVETEKCIEEPETKVPQTVVETEKSVEEPETKV 180
E T++ QTEVET+K +EPETK QTVVETEKC+EEPETK PQTV ETEK +EEPETK
Sbjct: 121 ESGTKVPQTEVETQKCTQEPETKVPQTVVETEKCVEEPETKAPQTVDETEKCIEEPETKG 180
Query: 181 PQTVAETKKYIEEPEMKAPQTVVETEKCIEP-ETKASPIVVETENFIELLVEPEIEAPQT 240
Q V +T+K IEE E KAP+ VVET+K +E E K VV+ E E E E++APQT
Sbjct: 181 LQIVVKTEKCIEEHETKAPRAVVETKKQVEEVEIKVPRTVVKPEKHAE---ESEVKAPQT 240
Query: 241 VVETENFI-------EPETKAPQTIVETEKHIEKAEIKVPQTVVELEKHKEEAEPAAPQT 300
VETE + E E KAPQT VETEK AE K+P+TVVE EKH EE+E APQT
Sbjct: 241 EVETEKSVPAEKHAEESEVKAPQTEVETEKSEIPAE-KMPRTVVEPEKHAEESEVKAPQT 300
Query: 301 KVVIEKSEVPAEKVPITDVPTTSDIITEANVTVPSPSDITLISETPKEKTSEDIKLPEKV 360
+V EKSE+PAEK+PITDVPTTS + + VT+ SPS + ISETP EKTSE++KLP+KV
Sbjct: 301 EVETEKSEIPAEKIPITDVPTTSATVPDEKVTITSPSHVKPISETPVEKTSENVKLPKKV 360
Query: 361 EKPEVVTLVEAIPGKEESTKIEQMKEDISNVEKIATGTPKEIEPKPAIPSETSTEPSQKI 416
EKPE VTLVEA P K EST EQ KEDISN+ K T K E STEP+QK
Sbjct: 361 EKPEAVTLVEAAPEKHESTTSEQKKEDISNIGKTEMETTK----------ERSTEPAQKN 402
BLAST of Sed0016708 vs. ExPASy TrEMBL
Match:
A0A6J1G592 (uncharacterized protein LOC111451030 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451030 PE=4 SV=1)
HSP 1 Score: 346.7 bits (888), Expect = 1.4e-91
Identity = 251/434 (57.83%), Postives = 289/434 (66.59%), Query Frame = 0
Query: 1 MGACASKPKVAGAKAPAPSPTPAPAPENKVEEKDVFVDAVVAFESDKKLEVTAEDIAGAG 60
MGACA+KPKV KA PAP PE VEEKDVFVD V + E++K E
Sbjct: 1 MGACATKPKVDSGKA------PAPVPEKNVEEKDVFVDTVASVEAEKTFE---------E 60
Query: 61 NQSDKGKEVV----------VEHRSLSHLFKEKEGGGSIECEEPTGETETLKSKESERDT 120
NQSDKGKEVV V+ RSLS LFKEKEG + CE P GETE L+S E+E+D
Sbjct: 61 NQSDKGKEVVDDDDKVDDQSVKRRSLSRLFKEKEGVNQL-CEGPAGETEKLESIETEKDG 120
Query: 121 KEVETEILQTEVETKKGIEEPETKALQTVVETEKCIEEPETKVPQTVVETEKSVEEPETK 180
KE T++ QTEVET+K +EPETK QTVVETEKCIEEPETK PQTV ETEK +EEPETK
Sbjct: 121 KESGTKVPQTEVETQKCTQEPETKVPQTVVETEKCIEEPETKAPQTVDETEKCIEEPETK 180
Query: 181 VPQTVAETKKYIEEPEMKAPQTVVETEKCIEP-ETKASPIVVETENFIELLVEPEIEAPQ 240
Q V +T+K IEE E KAP+ VVE EK +E E K VVE E E E E++APQ
Sbjct: 181 GLQIVVKTEKCIEEHETKAPRAVVEIEKQVEEVEIKVPRTVVEPEKNAE---ESEVKAPQ 240
Query: 241 TVVETE--------NFIEPETKAPQTIVETEKHIEKAEIKVPQTVVELEKHKEEAEPAAP 300
T VETE + E E KAP+T VETEK AE K+P+TVVE EKH EE+E AP
Sbjct: 241 TEVETEKSEIPAEKHAEESEVKAPRTEVETEKSEIPAE-KMPRTVVESEKHAEESEVKAP 300
Query: 301 QTKVVIEKSEVPAEKVPITDVPTTSDIITEANVTVPSPSDITLISETPKEKTSEDIKLPE 360
QT+V EKSE+PAEK+PITDVPTTS + + VT+ SPSD+ ISETP EKTSE++KLP+
Sbjct: 301 QTEVETEKSEIPAEKIPITDVPTTSATVPDEKVTITSPSDVEPISETPVEKTSENVKLPK 360
Query: 361 KVEKPEVVTLVEAIPGKEESTKIEQMKEDISNVEKIATGTPKEIEPKPAIPSETSTEPSQ 416
KVEKPE VTLVEA P K EST EQ KEDISN+ K T K E STEP+Q
Sbjct: 361 KVEKPEAVTLVEATPEKHESTTSEQKKEDISNIGKTEMETTK----------ERSTEPAQ 404
BLAST of Sed0016708 vs. ExPASy TrEMBL
Match:
A0A6J1L4V0 (serine-aspartate repeat-containing protein I-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499910 PE=4 SV=1)
HSP 1 Score: 339.7 bits (870), Expect = 1.7e-89
Identity = 241/425 (56.71%), Postives = 281/425 (66.12%), Query Frame = 0
Query: 1 MGACASKPKVAGAKAPAPSPTPAPAPENKVEEKDVFVDAVVAFESDKKLEVTAEDIAGAG 60
MGACA+KPKV K PAP PE VEEKDVFVD V E++K E
Sbjct: 1 MGACATKPKVDSGK------VPAPVPEKNVEEKDVFVDTVAPVEAEKIFE---------E 60
Query: 61 NQSDKGKEVV---------VEHRSLSHLFKEKEGGGSIECEEPTGETETLKSKESERDTK 120
NQSDKGKEVV V+ RSLSHLFKEKEG + CE P GETE L+SKE+E+D K
Sbjct: 61 NQSDKGKEVVDDDKVDDQSVKRRSLSHLFKEKEGVNQL-CEGPAGETEKLESKETEKDGK 120
Query: 121 EVETEILQTEVETKKGIEEPETKALQTVVETEKCIEEPETKVPQTVVETEKSVEEPETKV 180
E T++ QTEVET+K +EPETK QTVVETEKC+EEPETK PQTV ETEK +EEPETK
Sbjct: 121 ESGTKVPQTEVETQKCTQEPETKVPQTVVETEKCVEEPETKAPQTVDETEKCIEEPETKG 180
Query: 181 PQTVAETKKYIEEPEMKAPQTVVETEKCIEPETKASPIVVETENFIELLVEPEIEAPQTV 240
Q V +T+K IEE E KAP+ VVET+K +E E EI+ P+TV
Sbjct: 181 LQIVVKTEKCIEEHETKAPRAVVETKKQVE--------------------EVEIKVPRTV 240
Query: 241 VETENFI-EPETKAPQTIVETEKHIEKAEIKVPQTVVELEKHKEEAEPAAPQTKVVIEKS 300
V+ E E E KAPQT VETEK AE K+P+TVVE EKH EE+E APQT+V EKS
Sbjct: 241 VKPEKHAEESEVKAPQTEVETEKSEIPAE-KMPRTVVEPEKHAEESEVKAPQTEVETEKS 300
Query: 301 EVPAEKVPITDVPTTSDIITEANVTVPSPSDITLISETPKEKTSEDIKLPEKVEKPEVVT 360
E+PAEK+PITDVPTTS + + VT+ SPS + ISETP EKTSE++KLP+KVEKPE VT
Sbjct: 301 EIPAEKIPITDVPTTSATVPDEKVTITSPSHVKPISETPVEKTSENVKLPKKVEKPEAVT 360
Query: 361 LVEAIPGKEESTKIEQMKEDISNVEKIATGTPKEIEPKPAIPSETSTEPSQKIEEVKVTA 416
LVEA P K EST EQ KEDISN+ K T K E STEP+QK +E KV++
Sbjct: 361 LVEAAPEKHESTTSEQKKEDISNIGKTEMETTK----------ERSTEPAQKNQEAKVSS 378
BLAST of Sed0016708 vs. ExPASy TrEMBL
Match:
A0A6J1L2V7 (serine-aspartate repeat-containing protein I-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111499910 PE=4 SV=1)
HSP 1 Score: 319.3 bits (817), Expect = 2.3e-83
Identity = 226/424 (53.30%), Postives = 263/424 (62.03%), Query Frame = 0
Query: 1 MGACASKPKVAGAKAPAPSPTPAPAPENKVEEKDVFVDAVVAFESDKKLEVTAEDIAGAG 60
MGACA+KPKV K PAP PE VEEKDVFVD V E++K E
Sbjct: 1 MGACATKPKVDSGK------VPAPVPEKNVEEKDVFVDTVAPVEAEKIFE---------E 60
Query: 61 NQSDKGKEVV---------VEHRSLSHLFKEKEGGGSIECEEPTGETETLKSKESERDTK 120
NQSDKGKEVV V+ RSLSHLFKEKEG + CE P GETE L+SKE+E+D K
Sbjct: 61 NQSDKGKEVVDDDKVDDQSVKRRSLSHLFKEKEGVNQL-CEGPAGETEKLESKETEKDGK 120
Query: 121 EVETEILQTEVETKKGIEEPETKALQTVVETEKCIEEPETKVPQTVVETEKSVEEPETKV 180
E T++ QTE VET+KC +EPETKVPQTVVETEK VEEPETK
Sbjct: 121 ESGTKVPQTE------------------VETQKCTQEPETKVPQTVVETEKCVEEPETKA 180
Query: 181 PQTVAETKKYIEEPEMKAPQTVVETEKCIEPETKASPIVVETENFIELLVEPEIEAPQTV 240
PQTV ET+K IEEPE K Q VV+TEKCIE
Sbjct: 181 PQTVDETEKCIEEPETKGLQIVVKTEKCIE------------------------------ 240
Query: 241 VETENFIEPETKAPQTIVETEKHIEKAEIKVPQTVVELEKHKEEAEPAAPQTKVVIEKSE 300
E ETKAP+ +VET+K +E+ EIK+P+TVVE EKH EE+E APQT+V EKSE
Sbjct: 241 -------EHETKAPRAVVETKKQVEEVEIKMPRTVVEPEKHAEESEVKAPQTEVETEKSE 300
Query: 301 VPAEKVPITDVPTTSDIITEANVTVPSPSDITLISETPKEKTSEDIKLPEKVEKPEVVTL 360
+PAEK+PITDVPTTS + + VT+ SPS + ISETP EKTSE++KLP+KVEKPE VTL
Sbjct: 301 IPAEKIPITDVPTTSATVPDEKVTITSPSHVKPISETPVEKTSENVKLPKKVEKPEAVTL 343
Query: 361 VEAIPGKEESTKIEQMKEDISNVEKIATGTPKEIEPKPAIPSETSTEPSQKIEEVKVTAE 416
VEA P K EST EQ KEDISN+ K T K E STEP+QK +E KV++E
Sbjct: 361 VEAAPEKHESTTSEQKKEDISNIGKTEMETTK----------ERSTEPAQKNQEAKVSSE 343
BLAST of Sed0016708 vs. ExPASy TrEMBL
Match:
A0A6J1L0F6 (serine-aspartate repeat-containing protein I-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111499910 PE=4 SV=1)
HSP 1 Score: 318.9 bits (816), Expect = 3.1e-83
Identity = 226/424 (53.30%), Postives = 263/424 (62.03%), Query Frame = 0
Query: 1 MGACASKPKVAGAKAPAPSPTPAPAPENKVEEKDVFVDAVVAFESDKKLEVTAEDIAGAG 60
MGACA+KPKV K PAP PE VEEKDVFVD V E++K E
Sbjct: 1 MGACATKPKVDSGK------VPAPVPEKNVEEKDVFVDTVAPVEAEKIFE---------E 60
Query: 61 NQSDKGKEVV---------VEHRSLSHLFKEKEGGGSIECEEPTGETETLKSKESERDTK 120
NQSDKGKEVV V+ RSLSHLFKEKEG + CE P GETE L+SKE+E+D K
Sbjct: 61 NQSDKGKEVVDDDKVDDQSVKRRSLSHLFKEKEGVNQL-CEGPAGETEKLESKETEKDGK 120
Query: 121 EVETEILQTEVETKKGIEEPETKALQTVVETEKCIEEPETKVPQTVVETEKSVEEPETKV 180
E T++ QTE VET+KC +EPETKVPQTVVETEK VEEPETK
Sbjct: 121 ESGTKVPQTE------------------VETQKCTQEPETKVPQTVVETEKCVEEPETKA 180
Query: 181 PQTVAETKKYIEEPEMKAPQTVVETEKCIEPETKASPIVVETENFIELLVEPEIEAPQTV 240
PQTV ET+K IEEPE K Q VV+TEKCIE
Sbjct: 181 PQTVDETEKCIEEPETKGLQIVVKTEKCIE------------------------------ 240
Query: 241 VETENFIEPETKAPQTIVETEKHIEKAEIKVPQTVVELEKHKEEAEPAAPQTKVVIEKSE 300
E ETKAP+ +VET+K +E+ EIKVP+TVV+ EKH EE+E APQT+V EKSE
Sbjct: 241 -------EHETKAPRAVVETKKQVEEVEIKVPRTVVKPEKHAEESEVKAPQTEVETEKSE 300
Query: 301 VPAEKVPITDVPTTSDIITEANVTVPSPSDITLISETPKEKTSEDIKLPEKVEKPEVVTL 360
+PAEK+PITDVPTTS + + VT+ SPS + ISETP EKTSE++KLP+KVEKPE VTL
Sbjct: 301 IPAEKIPITDVPTTSATVPDEKVTITSPSHVKPISETPVEKTSENVKLPKKVEKPEAVTL 343
Query: 361 VEAIPGKEESTKIEQMKEDISNVEKIATGTPKEIEPKPAIPSETSTEPSQKIEEVKVTAE 416
VEA P K EST EQ KEDISN+ K T K E STEP+QK +E KV++E
Sbjct: 361 VEAAPEKHESTTSEQKKEDISNIGKTEMETTK----------ERSTEPAQKNQEAKVSSE 343
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023007403.1 | 1.5e-92 | 57.64 | neurofilament heavy polypeptide-like isoform X1 [Cucurbita maxima] | [more] |
KAG7035235.1 | 1.5e-92 | 58.78 | FAZ1 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_022947031.1 | 2.8e-91 | 57.83 | uncharacterized protein LOC111451030 isoform X1 [Cucurbita moschata] | [more] |
XP_023007404.1 | 3.5e-89 | 56.71 | serine-aspartate repeat-containing protein I-like isoform X2 [Cucurbita maxima] | [more] |
XP_023532568.1 | 1.8e-85 | 54.86 | uncharacterized protein LOC111794691 isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1L7K1 | 7.3e-93 | 57.64 | neurofilament heavy polypeptide-like isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1G592 | 1.4e-91 | 57.83 | uncharacterized protein LOC111451030 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1L4V0 | 1.7e-89 | 56.71 | serine-aspartate repeat-containing protein I-like isoform X2 OS=Cucurbita maxima... | [more] |
A0A6J1L2V7 | 2.3e-83 | 53.30 | serine-aspartate repeat-containing protein I-like isoform X3 OS=Cucurbita maxima... | [more] |
A0A6J1L0F6 | 3.1e-83 | 53.30 | serine-aspartate repeat-containing protein I-like isoform X4 OS=Cucurbita maxima... | [more] |
Match Name | E-value | Identity | Description | |