Sed0016702 (gene) Chayote v1

Overview


Name	Sed0016702
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ubiquitin receptor RAD23
Location	LG07: 36171305 .. 36178414 (-)
RNA-Seq Expression	Sed0016702
Synteny	Sed0016702

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCTTTGCTCTCTTTACTTGCGCTTTCGGTCACCGTGGGGTTCGAACCCTTTGCTCTCTCTAGGGTATTGGCATAGATTCTCCCAAATCCGGCATCGGAAACTGCGATTCCGGCCTTGCATCTTCGGAAAATCGGCGATCCAGTTCCGGAGATGAAGATTTTCGTCAAGACTCTCAAGGGCTCGCACTTCGAAATCCATGTTCAGCCTCAAGATACGGTCAGTTTACTTTCAGTTTCGTTTTTCAGTTCAATCGTTTGCATTGAGGCTATGCCTTGGAATCGAGGATTGTCCACTAGGTATTTGGATTCCGTTTTGTGTTTATCAGCCCCAATCGAAGTGGAGTTAGGGTTTATGCGATGGATAGTTCGTTGCTTTCCTTGTTGTACGTTCGAATTGTGTTGTAATTTGGAATTTAAATGTTGATTGCACTGTTTCTGTACTCGATTAATGTTTCGTTTGTTGTTTTTTTGTAGTTTGTTTTTCTTTCACTTGTAGCTAGCTTGGATTGTTATGTGTTGTCATTTGTGTTAAATTGTGTAGTTAATGTACTCTATTAACTAAATTCAAACTGATGTCTACGTTTCCCTTGGAGATTTAGACCACAGGTGATCTTGTTCGTTATTAAATTAGGAACAAGTATTGGTTGAATAAATACAGAAGATAAAAGTTTGTGAGATAAGAGCAGTCTCAGTAGTGAAACCTAAACTATATATTCAGCAAAGGAAAAGAAGGATAAGGCATCAATTCATCCCCTCTCCAAATCATAAGAAGACTAAAAAACATCCACACATTTATTTAAATAAGGCGGGTGTGTCATCGAGGAGCTTTGAGAATGCTAAGATCCTTTTTTTTTAAAAGAGAAACATTTCATTGATGAATGAAATAATGAGGATGAACCTTGAGGGTAAATTTCCTATTGCAAGCATTCTTATAGTTTAAATACGCTTCTAGATTACTAAATACGATTACTAAATACTGTACTTGTTAGTCTAAGATTCTTAATCATGTATAACACATTATTCTTGTAATTCTAAATAAATCTATTAATATCGCAATGTGCTAATTAAAAAATAAATGTTGCCTTGCAACAGCTGTTATCTCATATCCACCATTTGTCAATTCACATCACTCCTACTCCTACAAATGATTGCTCAAAAAATATGCCAGTACCATTATGGTGGTTGTGTCTCTTGAAATTGGATTTCCATGCTCCAAACGAGCACTGGAAGAATTATTCAAATGTGAGTGTACGTGTGAATAAAGTAAAGGAATTGGGCCTATATATGACTAGTCACTTTTTCCCAATCTCATTAGGTTAGAGGGACAATGAAATTAGGTGTGTTGGCCCTATATTTTATTTTCATCGTGAAATTTTGAAAAGCTTTGAGGTCGTCCCTGATAATAAATACGATATTGGAATTTCAGGAAGTGATGCTCTTAGTTTATTTCCCATAAAATGCTCATTAGTTTATTAGTCAACTGTAATGCGTCTAACTCTAAACTTAGTTGATAGTTAAGCTGTTATACATTGTATAAATGTATAACGACCATTTGCTTTATTAATTTTGTTTGAGTACATTGTATATGATGTATAAATGTATAACAACCATTTGCTTTATTCATTTTATGTGAGTATTTATTTGATTCTTTTTATTAAAGAAATCACACTCATATTCATACATTTATTTAACTATATAGTCTAATCTCAATAATAGACTAATATTATAAATCGCAAATTGTTCTAAAAACATGAACACGACTTTTAGAGTAAAATTCAAAGTCCGAAGTTTTACATGAATCAATTTGAGTCTTTTAATCAGATCTGCTTGACATCAACATTGTAGAATAACTGGACATTAATACAACAAAATCCACATCGTAGAAATTAGAATAACTGGACATTAATACAACAAAATCCGCAATGTAAAGTTATGGCCCTATGGGCAACTGATAAGCCAATATCACTGACAACTAAACTATTCTAGAACATCATTTTGTTGGTGCTTCAGAATTTGGTTATGACTGCTGCTGCATTAGTCATGATGCTTTCTGGCATCAAACATCTGTTTAGGAGAGTACTTGAGGTGTATTAAATAAATGTCCATATGAATAGCTAATCGTTGTTCTATGTTGACACCTACATATACTGCAGAATTTTACAAATGCAATTTGTTTATGGTACCTTTGGTAAACTTTTATAAATGCATTTTTCTGTTTAGATTTTTTTTATCTGTTGAGCCACCATGTTTTTGTTCTTCCTTTTTTTTTGGATATTTACATAAACTGACTTTGTTGGTCATTAGGTTGCTGATGTGAAGAAAAACATAGAAACTGTTCAGGGCGCTGATGTTTACCCTGCTGCACAACAAATGCTTATCCATCAAGGAAAAGTTCTTAAAGATGGCACCACACTGGATGAAAACAAAGTTGCAGAAAATAGTTTTATTGTAATTATGCTAACAAAGGTAGTAAAGTTGCTTCATTTTTTAACTGGATGGATTGTGTATATTATATTCTTGTAAGATAGGAGATTAATATTTATATTGTTACAAAAAAAAAGGCTCGATTCTTTTTTAAACAAAAAGATATATTTAATGGGGGGAAATATTAGATTACCTTGATGGCCACCTACCTAGGATTTAAATATCTATGTATTTTTTGTCAACCAAATATAGTAAGTCAACTGATTATTCAATGAGATTAGTCCATGTGTAAAAAAAAGATTACCACATGTCACATTTTCAGAAATTCATTGTGATAGACTCTGGAATTGCACCTGGTTATGTGTTTCATCCTCATTTTAGGATGGCTGTAACGAGATTTTATAAGGATGATTATGTGCCAAAACGAGCAATAATCAATATATTTATATGTTGGTGAAATGTTTCTACACTCTTAACAGATTTCCCACAAAATACCCATTTTTCAGCTAGAAAATGTGATAGTGAGAATGCCAAATTTTATGGAAGAAGGCAATTTTATTAGGAAAATTGTTGGCCATTTTTCTTACCTGGTACTGTTGCTGTTGCTTGATGTTGGGGGAAGTGTTCTTCCACCCTTTGTTTTGGGATGAAGGGTCTCGTCGTATACTTTGGTGGTTTGCTTTTGGATTTGTCTTGAGAGGTTTGAGAAGAGGTTTGGTCTTGGTCGCCCTCTTGGGTAAGATTTAGTGCTTCCCTTTGAGCGTCTGTTCCATGAATGTTAAGATTTTTGTTATTCTTTTTCATGTTCGATTTTCTTGGATTGGAACCCTTGTTGTGTGGCTAGTTAGGTCTCTCTTATCTTGTTTTGACTCCTCCTGTTGGTTTTTTTTTCTTTTTTTTCTTTTCTGTAATCTTTCTTTTTAATTAAAAAAGGAAAGAAAGAGAGAAGAAAAAGTGCTAGGAAATGTGAAGTATTTGTTACTTGACTGTACTTGTTCTTCTTTTATAGTGCTATATGGAGGGAAGACTATGTTTACCAGTTTACTTCTATAGATTGGTGGAAATGTCTTGCAAACACTTATACTATCTTGCCGTGGGAGGGAGGCTTACAATTGGTAGTCTAGAGCTCATGCTTGGAAGTGTCAGCACTCAAATCGAAGAGAATGTTTTTGCTTGCTTGTGTATTTATTTTGGTTGCTATGATGTTTTATAGCACTCCCCTGTTGTTTGCACTTGATTATGAAATGACGACAAAACCCTGGATATGTTTAGGTGTACAATATCATATTGGAATTTTTACTACCTGCTTTGTGAATCCTCTTGATTATCTCTTTTTTTTGCTCAAATAGCCTCTTTTTTGTTCTTTTTATTTATAGAATAAAAGTTCATCGGGAGGGTCATCTTCTACCACACAAGCTGCACCAGTGTCGAAGGTAAGGAATACCAGTTCTAGTTTCTTTACTGGCCTGTGGTAATGGTGGGTGGTAGTCTCAGTGTCTCTGAACGTCTTTGATGCTGTAATTTACCTTTTCTAATGGATTTTGTTTTTTCTTTTCTTTCTTTTTTTATTTTCTACTGAGTTTGCTGGATATTAATATCAGATTCTAGTGTAAGCTTTTCAATACTAAAGTTTTGTTCATATTTATTTTAGTTAGCTTATTACCTGTTTCAGTGAGTCATTTTCACCCAATTGGATGCATTTATCGAACACTCCAGATTAAGATATGTGCTGTTTTAAAATAAAAGAATTCATATATATTGTTGAAATGGTGGAGGCATAAATCTGTATTCAAATACTTGCAAGTTGCATTATTTATGAAAAATATGATTTTTCGTTTGTTCTATAAGAGTGATGTAGAGTAACAGTTCCTAAATGTGATTGTTTCCAAATGTCATATACAAACCGTGCACGATGTTGTTTGAACACTATTGCCAATCCTTTGGAGTTGATGCAGTGTTCTTCAATTGGGAATATTTATTTATTCCCATAAAATACTGTTATTTTTCTACCAGTTTTACTGATTGAAATGTAATTTTAAGAAATGGAAATATAGTTAAGTATGACAAGGACTCCTTGTAGGCACCACAGAACACTGCTCCTGCACCTGCTGCCACTCCAGTCTTAACATCTGAAGTTCCTCTACCAACTTCAGCACCGTGAGTTCAGATCTTACTGCTATATCTTTCCAGAATAATTGTTCTAGGAGCATTTAAGTTTATGAAAATTATCTTTATTTCAGGCCGGCTACTGTTACTGCCTCTTCTCCTGCTCCTGCTCCTGCTCCTGCTCCTGCTCCTGCTCCGGCTCCGGCTCTGGCTCCAGTTCCAGCTCCAGCTCCAGCTCCAGCTCCAGCTCCGGCTCCGGTGCCTGCAACTAGTGTTTTGTGAGGAATTCTTCCCTTCCCTTCATGCCTTTTATATTCAATGCTAGGTTTTTGTTCACTCTTTAGTCTTTATTTTCAGACTTATTTTCTAAATTTACTTTATTGATCCTGTAAAAACAGGCCAGAAGCTGACGTCTACAGCCAAGCAGCTTCTAACCTGGTTGCCGGAAGTAACTTGGAGGAGACTATCAATCAGATTCTTCTTATGGGCGGAGGGCTTTGGGACAGGGACATTGTTGTTCGAGCTCTTCGTGCTGCTTACAACAATCCAGAAAGGGCTGTTGATTACCTTTATTCTGTAAGTCTATTGCAGATGTTTATATTTTTTCTGTTCTACTGTTATTCTTGTCTCATTGTACGTAGCAAGTTCATTAGGACTTCTATTTAAAGAAAGAAATTATGAATGGTCATATTTTTTTTACCTCTGCAAGTTTTAATTGTTTAGAATGTAGTATTTGAACAAAATTATCTCCATATTTAGGGCATACCTGAACAAGAAGCTCCTCCTGCTGCTCGAGTTTCGTCTACTGTTCCAGTGACCAACCCTGCTGCTCAACCTGCACAGCCAGCCCAACCTGCATCTATGCCATCAACTGGTCCAAATGCTAACCCATTAGATCTCTTTCCTCAGGTAGGAAAAGAAAAATTAATGAACAAGTTCGGTAGGGAGAAGAAAAATGAGCAATTTTACTGGTTGTTTTGAAATTTGCAACTTTATGAACTCTTATTTTTTAACTTCAGGGTCTGCCTAATTTAGCTTCTGGAGCTGTTGGTTCTGGAAGTCTCGATTTTCTACGAAATAGTCCCCAGGTTCTCTCTCCTTCCCCCTCTCTCCTTGTATAAACTGACACGTTCCCCGCCTCTGAAAATGTATTATTTTCCATCTCAGTTCCAAGCTTTGCGAGCCATGGTGCGAGCTAACCCTCAGATACTCCAGGTTCTTCATCTACTTCATTTCGTAATTCTTTTTAAAGCCAAAAACGCTAGGTGCGTTACTTCATTTTATACAAGGTTCGTTTTTCATTGATTTTGTTTCAGCCTATGCTTCAAGAGTTGGGTAAACAAAATCCTCAGCTGATCAGACTTATTCAAGATCATCAACCTGACTTCCTCCGTTTGATTAACGAGCCCCTTGAAGGGGAAGGGTACATTTTCTTTCACCCTTTTTACTTGAAACAATTGTGGAAATTTATGTATTAATTAATATATGTCACCAAGAGTGGTGGCACGGTAGTTGAAAACTTGGCCTTTGATGGTGTGTTCTCTTCTAAGTCCCAAGTTCGAGACTCATCTGTGACATTAATTTGTAGACATCTACTGTGTCTCCATTTCTTCGATGTCTCTCGGTGCCTGACCTAGAGATGACATGGTTATTCTGGTTATAGTGGAGTGAAGCTTCGATTTTCTAAGTTCAATAAAGGAAAATTAACATAGAAAAACTTGTTCAGGAATGTTCTTGGGCAGCTTGCTGAGGCAACGCCACACGCCATAACTGTAACCCCAGAGGAGCGTGAAGCCATTCAACGGGTTAGTTTTCATTTAATGAAAAAATTAAACAACCATTATGTGTTGACTTATAGTTGTCAAAGAAGGTTTTGAGAACTAAAAAGTTAGAAGTTCAATCCACGATGAAGAACACCTATTTGACAATCAAATATTGTCAGACAGGGTTTGTCTTGTAAAATAGAGTCTAGTTGCGATTAAGTTAAGCTGAACTTCCTCGGATATAAGAAAATAATCAAGACAATTGAATTCATTTGGTTTCATATTTACTCGGATTTTTTCTTTTGGCCTTTGTTTTTAACTATATTTGGGATATTATATGTCTTCGTTGGCAACAGCTTGAGGATTTGGGTTTCGACAGAGCTTTGGTACTGGAGGTTTTCTTTGCCTGCAACAAGAACGAGGAAATGGCTGCCAACTACCTTTTAGATCATATTCACGAATTTGAGGATAATCAGAATTAGTTCTCATTCTCATGCCCCTATTTAAATAAACCCCAAAAAAAGATTAAAAAAAAATGAAAAACAAGACCAATCCATCAGCAAAACAAAAAAAAGGGAAAGTATCTGTGTTTTTACTCTTTTCGCCTTTGGCCACATTGTGAATTTGTGTTTGCTGTGAACGAAAGATGTGAAGATATGCGTTTTTATCCTTTTTCTCTATTTAAGTTCTGCTTAGAGCCTCCTATCAATGTCATATTTACACTTAAAATACTATTTCTGCCTACTTTTTTGTTTGGCACTTTTAATTGAATATCGACTTTTCTTAGTTTTTCATTTCATCTAGCCGAAGTTCTT

mRNA sequence

TTTCCTTTGCTCTCTTTACTTGCGCTTTCGGTCACCGTGGGGTTCGAACCCTTTGCTCTCTCTAGGGTATTGGCATAGATTCTCCCAAATCCGGCATCGGAAACTGCGATTCCGGCCTTGCATCTTCGGAAAATCGGCGATCCAGTTCCGGAGATGAAGATTTTCGTCAAGACTCTCAAGGGCTCGCACTTCGAAATCCATGTTCAGCCTCAAGATACGGTTGCTGATGTGAAGAAAAACATAGAAACTGTTCAGGGCGCTGATGTTTACCCTGCTGCACAACAAATGCTTATCCATCAAGGAAAAGTTCTTAAAGATGGCACCACACTGGATGAAAACAAAGTTGCAGAAAATAGTTTTATTGTAATTATGCTAACAAAGAATAAAAGTTCATCGGGAGGGTCATCTTCTACCACACAAGCTGCACCAGTGTCGAAGGCACCACAGAACACTGCTCCTGCACCTGCTGCCACTCCAGTCTTAACATCTGAAGTTCCTCTACCAACTTCAGCACCGCCGGCTACTGTTACTGCCTCTTCTCCTGCTCCTGCTCCTGCTCCTGCTCCTGCTCCTGCTCCGGCTCCGGCTCTGGCTCCAGTTCCAGCTCCAGCTCCAGCTCCAGCTCCAGCTCCGGCTCCGGTGCCTGCAACTAGTGTTTTGCCAGAAGCTGACGTCTACAGCCAAGCAGCTTCTAACCTGGTTGCCGGAAGTAACTTGGAGGAGACTATCAATCAGATTCTTCTTATGGGCGGAGGGCTTTGGGACAGGGACATTGTTGTTCGAGCTCTTCGTGCTGCTTACAACAATCCAGAAAGGGCTGTTGATTACCTTTATTCTGGCATACCTGAACAAGAAGCTCCTCCTGCTGCTCGAGTTTCGTCTACTGTTCCAGTGACCAACCCTGCTGCTCAACCTGCACAGCCAGCCCAACCTGCATCTATGCCATCAACTGGTCCAAATGCTAACCCATTAGATCTCTTTCCTCAGGGTCTGCCTAATTTAGCTTCTGGAGCTGTTGGTTCTGGAAGTCTCGATTTTCTACGAAATAGTCCCCAGTTCCAAGCTTTGCGAGCCATGGTGCGAGCTAACCCTCAGATACTCCAGCCTATGCTTCAAGAGTTGGGTAAACAAAATCCTCAGCTGATCAGACTTATTCAAGATCATCAACCTGACTTCCTCCGTTTGATTAACGAGCCCCTTGAAGGGGAAGGGAATGTTCTTGGGCAGCTTGCTGAGGCAACGCCACACGCCATAACTGTAACCCCAGAGGAGCGTGAAGCCATTCAACGGCTTGAGGATTTGGGTTTCGACAGAGCTTTGGTACTGGAGGTTTTCTTTGCCTGCAACAAGAACGAGGAAATGGCTGCCAACTACCTTTTAGATCATATTCACGAATTTGAGGATAATCAGAATTAGTTCTCATTCTCATGCCCCTATTTAAATAAACCCCAAAAAAAGATTAAAAAAAAATGAAAAACAAGACCAATCCATCAGCAAAACAAAAAAAAGGGAAAGTATCTGTGTTTTTACTCTTTTCGCCTTTGGCCACATTGTGAATTTGTGTTTGCTGTGAACGAAAGATGTGAAGATATGCGTTTTTATCCTTTTTCTCTATTTAAGTTCTGCTTAGAGCCTCCTATCAATGTCATATTTACACTTAAAATACTATTTCTGCCTACTTTTTTGTTTGGCACTTTTAATTGAATATCGACTTTTCTTAGTTTTTCATTTCATCTAGCCGAAGTTCTT

Coding sequence (CDS)

ATGAAGATTTTCGTCAAGACTCTCAAGGGCTCGCACTTCGAAATCCATGTTCAGCCTCAAGATACGGTTGCTGATGTGAAGAAAAACATAGAAACTGTTCAGGGCGCTGATGTTTACCCTGCTGCACAACAAATGCTTATCCATCAAGGAAAAGTTCTTAAAGATGGCACCACACTGGATGAAAACAAAGTTGCAGAAAATAGTTTTATTGTAATTATGCTAACAAAGAATAAAAGTTCATCGGGAGGGTCATCTTCTACCACACAAGCTGCACCAGTGTCGAAGGCACCACAGAACACTGCTCCTGCACCTGCTGCCACTCCAGTCTTAACATCTGAAGTTCCTCTACCAACTTCAGCACCGCCGGCTACTGTTACTGCCTCTTCTCCTGCTCCTGCTCCTGCTCCTGCTCCTGCTCCTGCTCCGGCTCCGGCTCTGGCTCCAGTTCCAGCTCCAGCTCCAGCTCCAGCTCCAGCTCCGGCTCCGGTGCCTGCAACTAGTGTTTTGCCAGAAGCTGACGTCTACAGCCAAGCAGCTTCTAACCTGGTTGCCGGAAGTAACTTGGAGGAGACTATCAATCAGATTCTTCTTATGGGCGGAGGGCTTTGGGACAGGGACATTGTTGTTCGAGCTCTTCGTGCTGCTTACAACAATCCAGAAAGGGCTGTTGATTACCTTTATTCTGGCATACCTGAACAAGAAGCTCCTCCTGCTGCTCGAGTTTCGTCTACTGTTCCAGTGACCAACCCTGCTGCTCAACCTGCACAGCCAGCCCAACCTGCATCTATGCCATCAACTGGTCCAAATGCTAACCCATTAGATCTCTTTCCTCAGGGTCTGCCTAATTTAGCTTCTGGAGCTGTTGGTTCTGGAAGTCTCGATTTTCTACGAAATAGTCCCCAGTTCCAAGCTTTGCGAGCCATGGTGCGAGCTAACCCTCAGATACTCCAGCCTATGCTTCAAGAGTTGGGTAAACAAAATCCTCAGCTGATCAGACTTATTCAAGATCATCAACCTGACTTCCTCCGTTTGATTAACGAGCCCCTTGAAGGGGAAGGGAATGTTCTTGGGCAGCTTGCTGAGGCAACGCCACACGCCATAACTGTAACCCCAGAGGAGCGTGAAGCCATTCAACGGCTTGAGGATTTGGGTTTCGACAGAGCTTTGGTACTGGAGGTTTTCTTTGCCTGCAACAAGAACGAGGAAATGGCTGCCAACTACCTTTTAGATCATATTCACGAATTTGAGGATAATCAGAATTAG

Protein sequence

MKIFVKTLKGSHFEIHVQPQDTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLDENKVAENSFIVIMLTKNKSSSGGSSSTTQAAPVSKAPQNTAPAPAATPVLTSEVPLPTSAPPATVTASSPAPAPAPAPAPAPAPALAPVPAPAPAPAPAPAPVPATSVLPEADVYSQAASNLVAGSNLEETINQILLMGGGLWDRDIVVRALRAAYNNPERAVDYLYSGIPEQEAPPAARVSSTVPVTNPAAQPAQPAQPASMPSTGPNANPLDLFPQGLPNLASGAVGSGSLDFLRNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLAEATPHAITVTPEEREAIQRLEDLGFDRALVLEVFFACNKNEEMAANYLLDHIHEFEDNQN

Homology

[Close]

BLAST of Sed0016702 vs. NCBI nr
Match: XP_022945311.1 (ubiquitin receptor RAD23d-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 690.3 bits (1780), Expect = 1.1e-194
Identity = 379/421 (90.02%), Postives = 390/421 (92.64%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIHVQPQDTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEI VQPQD VADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGSSSTTQAAPVSKAPQNTAPAPAATPVLTSEVPLPTSA 120
           ENKVAENSFIVIMLTKNKSSSGG+SSTTQAAPVSKAPQNTAPAPAATPV TSEVPLPTSA
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATVTASSPAPAPAPAPAPAPAPALAPVPAPAPAPAPAPAPVPATSVLPEADVYSQAAS 180
           PPAT+T SS          PAPAPA AP PAPA APAPAPA  PAT+VLPE+DVYSQAAS
Sbjct: 121 PPATITTSS---------LPAPAPAQAPAPAPAQAPAPAPAQAPATTVLPESDVYSQAAS 180

Query: 181 NLVAGSNLEETINQILLMGGGLWDRDIVVRALRAAYNNPERAVDYLYSGIPEQ-EAPPAA 240
           NLVAGSNLEETI QILLMGGG+WDRD VV+ALRAAYNNPERAVDYLYSGIPEQ E PPAA
Sbjct: 181 NLVAGSNLEETIQQILLMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAA 240

Query: 241 RVSSTVPVTNPAAQPAQPAQPASMPSTGPNANPLDLFPQGLPNLASGAVGSGSLDFLRNS 300
            V STVPVTNP+AQPAQPAQPAS  +TGPNANPLDLFPQG+PNLASGAV SGSLDFLRNS
Sbjct: 241 HVPSTVPVTNPSAQPAQPAQPASATTTGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNS 300

Query: 301 PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL 360
           PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL
Sbjct: 301 PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL 360

Query: 361 AEATPHAITVTPEEREAIQRLEDLGFDRALVLEVFFACNKNEEMAANYLLDHIHEFEDNQ 420
           A+A P AITVTPEEREAIQRLEDLGFDRALV+EVFFACNKNEEMAANYLLDHIHEFE NQ
Sbjct: 361 ADAMPQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQ 412

[Close]

BLAST of Sed0016702 vs. NCBI nr
Match: KAG7013030.1 (Ubiquitin receptor RAD23c, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 678.3 bits (1749), Expect = 4.2e-191
Identity = 370/421 (87.89%), Postives = 381/421 (90.50%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIHVQPQDTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEI VQPQD VADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 66  MKIFVKTLKGSHFEIEVQPQDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 125

Query: 61  ENKVAENSFIVIMLTKNKSSSGGSSSTTQAAPVSKAPQNTAPAPAATPVLTSEVPLPTSA 120
           ENKVAENSFIVIMLTKNKSSSGG+SSTTQAAPVSKAPQNTAPAPAATPV TSEVPLPTSA
Sbjct: 126 ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 185

Query: 121 PPATVTASSPAPAPAPAPAPAPAPALAPVPAPAPAPAPAPAPVPATSVLPEADVYSQAAS 180
           PPAT+T SS                      PAPAPAPAPA  PAT+VLPE+DVYSQAAS
Sbjct: 186 PPATITTSS---------------------LPAPAPAPAPAQAPATTVLPESDVYSQAAS 245

Query: 181 NLVAGSNLEETINQILLMGGGLWDRDIVVRALRAAYNNPERAVDYLYSGIPEQ-EAPPAA 240
           NLVAGSNLEETI QILLMGGG+WDRD VV+ALRAAYNNPERAVDYLYSGIPEQ E PPAA
Sbjct: 246 NLVAGSNLEETIQQILLMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAA 305

Query: 241 RVSSTVPVTNPAAQPAQPAQPASMPSTGPNANPLDLFPQGLPNLASGAVGSGSLDFLRNS 300
            V STVPVTNP+AQPAQPAQPAS  +TGPNANPLDLFPQG+PNLASGAV SGSLDFLRNS
Sbjct: 306 HVPSTVPVTNPSAQPAQPAQPASATTTGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNS 365

Query: 301 PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL 360
           PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL
Sbjct: 366 PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL 425

Query: 361 AEATPHAITVTPEEREAIQRLEDLGFDRALVLEVFFACNKNEEMAANYLLDHIHEFEDNQ 420
           A+A P AITVTPEEREAIQRLEDLGFDRALV+EVFFACNKNEEMAANYLLDHIHEFE NQ
Sbjct: 426 ADAMPQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQ 465

[Close]

BLAST of Sed0016702 vs. NCBI nr
Match: XP_022945312.1 (ubiquitin receptor RAD23d-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 675.2 bits (1741), Expect = 3.5e-190
Identity = 368/421 (87.41%), Postives = 379/421 (90.02%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIHVQPQDTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEI VQPQD VADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGSSSTTQAAPVSKAPQNTAPAPAATPVLTSEVPLPTSA 120
           ENKVAENSFIVIMLTKNKSSSGG+SSTTQAAPVSKAPQNTAPAPAATPV TSEVPLPTSA
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATVTASSPAPAPAPAPAPAPAPALAPVPAPAPAPAPAPAPVPATSVLPEADVYSQAAS 180
           PPAT+T SS                        PAPAPAPA  PAT+VLPE+DVYSQAAS
Sbjct: 121 PPATITTSS-----------------------LPAPAPAPAQAPATTVLPESDVYSQAAS 180

Query: 181 NLVAGSNLEETINQILLMGGGLWDRDIVVRALRAAYNNPERAVDYLYSGIPEQ-EAPPAA 240
           NLVAGSNLEETI QILLMGGG+WDRD VV+ALRAAYNNPERAVDYLYSGIPEQ E PPAA
Sbjct: 181 NLVAGSNLEETIQQILLMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAA 240

Query: 241 RVSSTVPVTNPAAQPAQPAQPASMPSTGPNANPLDLFPQGLPNLASGAVGSGSLDFLRNS 300
            V STVPVTNP+AQPAQPAQPAS  +TGPNANPLDLFPQG+PNLASGAV SGSLDFLRNS
Sbjct: 241 HVPSTVPVTNPSAQPAQPAQPASATTTGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNS 300

Query: 301 PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL 360
           PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL
Sbjct: 301 PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL 360

Query: 361 AEATPHAITVTPEEREAIQRLEDLGFDRALVLEVFFACNKNEEMAANYLLDHIHEFEDNQ 420
           A+A P AITVTPEEREAIQRLEDLGFDRALV+EVFFACNKNEEMAANYLLDHIHEFE NQ
Sbjct: 361 ADAMPQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQ 398

[Close]

BLAST of Sed0016702 vs. NCBI nr
Match: XP_022968287.1 (ubiquitin receptor RAD23d-like [Cucurbita maxima])

HSP 1 Score: 672.9 bits (1735), Expect = 1.7e-189
Identity = 367/421 (87.17%), Postives = 378/421 (89.79%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIHVQPQDTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEI VQPQD VADVKK IETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGSSSTTQAAPVSKAPQNTAPAPAATPVLTSEVPLPTSA 120
           ENKVAENSFIVIMLTKNKSSSGG+SSTTQAAPVSKAPQNTAPAPAATPV TSEVPLPTSA
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATVTASSPAPAPAPAPAPAPAPALAPVPAPAPAPAPAPAPVPATSVLPEADVYSQAAS 180
           PPAT+T SS                        PAPAPAPA  PAT+VLPE+DVYSQAAS
Sbjct: 121 PPATITTSS-----------------------LPAPAPAPAQAPATTVLPESDVYSQAAS 180

Query: 181 NLVAGSNLEETINQILLMGGGLWDRDIVVRALRAAYNNPERAVDYLYSGIPEQ-EAPPAA 240
           NLVAGSNLEETI QILLMGGG+WDRD VV+ALRAAYNNPERAVDYLYSGIPEQ E PPAA
Sbjct: 181 NLVAGSNLEETIQQILLMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAA 240

Query: 241 RVSSTVPVTNPAAQPAQPAQPASMPSTGPNANPLDLFPQGLPNLASGAVGSGSLDFLRNS 300
            V STVPVTNP+AQPAQPAQPAS  +TGPNANPLDLFPQG+PNLASGAV SGSLDFLRNS
Sbjct: 241 HVPSTVPVTNPSAQPAQPAQPASATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNS 300

Query: 301 PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL 360
           PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL
Sbjct: 301 PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL 360

Query: 361 AEATPHAITVTPEEREAIQRLEDLGFDRALVLEVFFACNKNEEMAANYLLDHIHEFEDNQ 420
           A+A P AITVTPEEREAIQRLEDLGFDRALV+EVFFACNKNEEMAANYLLDHIHEFE NQ
Sbjct: 361 ADAMPQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQ 398

[Close]

BLAST of Sed0016702 vs. NCBI nr
Match: KAG6601319.1 (Ubiquitin receptor RAD23c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 669.5 bits (1726), Expect = 1.9e-188
Identity = 369/421 (87.65%), Postives = 385/421 (91.45%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIHVQPQDTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEI V+P+D VADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGSSSTTQAAPVSKAPQNTAPAPAATPVLTSEVPLPTSA 120
           ENKV+ENSFIVIMLTKNKSSSG +SSTTQAAPVSKAPQNTAPAPAATPV TSEVPLPTSA
Sbjct: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATVTASSPAPAPAPAPAPAPAPALAPVPAPAPAPAPAPAPVPATSVLPEADVYSQAAS 180
           PPATVT S+P           PAP     PA APAPAP+PA VPAT+VL E+DVYSQAAS
Sbjct: 121 PPATVTDSTP-----------PAP-----PALAPAPAPSPAAVPATTVLAESDVYSQAAS 180

Query: 181 NLVAGSNLEETINQILLMGGGLWDRDIVVRALRAAYNNPERAVDYLYSGIPEQ-EAPPAA 240
           NLVAGSNLE+TI QILLMGGG+WDRD VVRALRAAYNNPERAVDYLYSGIPEQ E PPAA
Sbjct: 181 NLVAGSNLEDTIQQILLMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAA 240

Query: 241 RVSSTVPVTNPAAQPAQPAQPASMPSTGPNANPLDLFPQGLPNLASGAVGSGSLDFLRNS 300
            V STV  TNP+AQPAQPAQPAS+ STGPNANPLDLFPQGLPN++SGAVGSGSLDFLRNS
Sbjct: 241 GVPSTVQATNPSAQPAQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNS 300

Query: 301 PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL 360
           PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGN+LGQL
Sbjct: 301 PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQL 360

Query: 361 AEATPHAITVTPEEREAIQRLEDLGFDRALVLEVFFACNKNEEMAANYLLDHIHEFEDNQ 420
           AEA P AITVTPEEREAIQRLEDLGFDRALV+EVFFACNKNEEMAANYLLDHIHEFE NQ
Sbjct: 361 AEAMPQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQ 405

[Close]

BLAST of Sed0016702 vs. ExPASy Swiss-Prot
Match: Q84L31 (Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2)

HSP 1 Score: 468.8 bits (1205), Expect = 6.6e-131
Identity = 276/426 (64.79%), Postives = 321/426 (75.35%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIHVQPQDTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKG+HFEI V+P+D+V DVKKNIE+VQGADVYPAA+QMLIHQGKVLKD TT++
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGSSSTTQAAPVSKAPQNTAPAPAATPVLTSEVPLPTSA 120
           ENKVAENSFIVIM+ K+K +S  +SS +     +K    + P   + P ++ + P   SA
Sbjct: 61  ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAK----SIPPSTSQPSISPQTPASVSA 120

Query: 121 PPATVTASSPAPAPAPAPAPAPAPALAPVPAPAPAPAPAPAPVPATSVLP---EADVYSQ 180
           P A      P PAP P PAP  A      P P P PA   +  PA    P   + DVY Q
Sbjct: 121 PVAPAPTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGSQGDVYGQ 180

Query: 181 AASNLVAGSNLEETINQILLMGGGLWDRDIVVRALRAAYNNPERAVDYLYSGIPEQ-EAP 240
           AASNL AGSNLE TI QIL MGGG WDR+ VV ALRAA+NNPERAV+YLY+GIPEQ E P
Sbjct: 181 AASNLAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVP 240

Query: 241 PAARVSSTVPVTNPAAQPAQPAQPASMPSTGPNANPLDLFPQGLPNLASGAVGSGSLDFL 300
           P AR  ++     PA  PAQ  QPA+ P++GPNANPLDLFPQGLPN+  G  G+G+LDFL
Sbjct: 241 PVARPPAS--AGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNV-GGNPGAGTLDFL 300

Query: 301 RNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEG---EG 360
           RNS QFQALRAMV+ANPQ+LQPMLQELGKQNP L+RLIQDHQ DFLRLINEP+EG    G
Sbjct: 301 RNSQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESG 360

Query: 361 NVLGQLAEA--TPHAITVTPEEREAIQRLEDLGFDRALVLEVFFACNKNEEMAANYLLDH 418
           N+LGQ+A     P AI VT EEREAI+RLE +GF+RALVLEVFFACNKNEE+AANYLLDH
Sbjct: 361 NLLGQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDH 419

[Close]

BLAST of Sed0016702 vs. ExPASy Swiss-Prot
Match: Q84L30 (Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2)

HSP 1 Score: 448.4 bits (1152), Expect = 9.2e-125
Identity = 269/419 (64.20%), Postives = 307/419 (73.27%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIHVQPQDTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTL GS+FEI V+P D V+DVK  IETV+GA+ YPAA+QMLIHQGKVLKD TTL+
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGSSSTTQAAPVSKAPQNTAPAPAATPVLTSEVPLPTSA 120
           EN V ENSFIVIML+K K+S  G+S  T +AP   AP  T P   ATP          SA
Sbjct: 61  ENNVVENSFIVIMLSKTKASPSGAS--TASAP---APSATQPQTVATP--------QVSA 120

Query: 121 PPATVTASSPAPAPAPAPAPAPAPALAPVPAPAPAPAPAPAPVPATSVLPEADVYSQAAS 180
           P A+V                          P P    A A  PAT+   + DVY QAAS
Sbjct: 121 PTASV--------------------------PVPTSGTATAAAPATAASVQTDVYGQAAS 180

Query: 181 NLVAGSNLEETINQILLMGGGLWDRDIVVRALRAAYNNPERAVDYLYSGIPEQ-EAPPAA 240
           NLVAG+ LE T+ QIL MGGG WDRD VVRALRAA+NNPERAV+YLYSGIP Q E PP A
Sbjct: 181 NLVAGTTLESTVQQILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIPPVA 240

Query: 241 RVSST-VPVTNPAAQPAQPAQPASMPSTGPNANPLDLFPQGLPNLASGAVGSGSLDFLRN 300
           +  +T     NP AQP Q A PA+  + GPNANPL+LFPQG+P   +GA G+G+LDFLRN
Sbjct: 241 QAPATGEQAANPLAQPQQAAAPAA-ATGGPNANPLNLFPQGMPAADAGA-GAGNLDFLRN 300

Query: 301 SPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQ 360
           S QFQALRAMV+ANPQILQPMLQELGKQNPQL+RLIQ+HQ DFLRLINEP+EGE NV+ Q
Sbjct: 301 SQQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVEGEENVMEQ 360

Query: 361 LAEATPHAITVTPEEREAIQRLEDLGFDRALVLEVFFACNKNEEMAANYLLDHIHEFED 418
           L  A P A+TVTPEEREAI+RLE +GFDRA+VLEVFFACNKNEE+AANYLLDH+HEFED
Sbjct: 361 LEAAMPQAVTVTPEEREAIERLEGMGFDRAMVLEVFFACNKNEELAANYLLDHMHEFED 377

[Close]

BLAST of Sed0016702 vs. ExPASy Swiss-Prot
Match: Q40742 (Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RAD23 PE=1 SV=2)

HSP 1 Score: 399.4 bits (1025), Expect = 4.9e-110
Identity = 247/419 (58.95%), Postives = 290/419 (69.21%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIHVQPQDTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKI VKTLKGS F+I V     VADVK+ IET QG  +YPA QQMLIHQGKVLKD TTLD
Sbjct: 1   MKISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGSSSTTQAAPVSKAPQNTAPAPAATPVLTSEVPLPTSA 120
           ENKV ENSF+VIML + K SS  + +T      SKAP N AP              PT  
Sbjct: 61  ENKVLENSFLVIMLRQGKGSSSSAPAT------SKAPSNQAP--------------PTQT 120

Query: 121 PPATVTASSPAPAPAPAPAPAPAPALAPVPAPAPAPAPAPAPVPATSVLPEADVYSQAAS 180
            PA         APA     APA  + PV   AP P    +P PA +V  EAD Y QA S
Sbjct: 121 VPA---------APASQAPVAPATTV-PVTVSAPTPTATASPAPAVAVSSEADNYGQATS 180

Query: 181 NLVAGSNLEETINQILLMGGGLWDRDIVVRALRAAYNNPERAVDYLYSGIPEQEAPPAAR 240
           NLVAGSNLE TI  IL MGGG+WDRDIV+ AL AA+NNPERAV+YLYSG+PEQ   P   
Sbjct: 181 NLVAGSNLEATIQSILEMGGGIWDRDIVLHALSAAFNNPERAVEYLYSGVPEQMDIPVPP 240

Query: 241 VSSTVPVTNPAAQPAQPAQPASMPSTGPNANPLDLFPQGLPNLASGAVGSGSLDFLRNSP 300
            S        A+Q  QPA P S+ S+GPNA+PLDLFPQ LPN ++ A G G+LD LRN+ 
Sbjct: 241 PSIQPANPTQASQATQPAAP-SILSSGPNASPLDLFPQALPNASTDAAGLGNLDALRNNA 300

Query: 301 QFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEG--EGNVLGQ 360
           QF+ L ++V+ANPQILQP+LQELGKQNPQ+++LIQ++Q +FL LINEP EG  E N+L Q
Sbjct: 301 QFRTLLSLVQANPQILQPLLQELGKQNPQILQLIQENQAEFLHLINEPAEGDDEENLLDQ 360

Query: 361 LAEATPHAITVTPEEREAIQRLEDLGFDRALVLEVFFACNKNEEMAANYLLDHIHEFED 418
             EA P  I VTPEE EAI RLE +GFDRALVL+VFFACNK+E++AANYLLDH++EF+D
Sbjct: 361 FPEAMPQTIAVTPEENEAILRLEAMGFDRALVLDVFFACNKDEQLAANYLLDHMNEFDD 388

[Close]

BLAST of Sed0016702 vs. ExPASy Swiss-Prot
Match: Q84L33 (Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3)

HSP 1 Score: 354.4 bits (908), Expect = 1.8e-96
Identity = 220/420 (52.38%), Postives = 272/420 (64.76%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIHVQPQDTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MK+ VKTLKGSHFEI V P DT+  VKKNIE  QG D YP  QQ+LIH GKVLKD T+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGSSSTTQAAPVSKAPQNTAPAPAATPVLTSEVPLPTSA 120
           ENKV E  F+V+ML+K+KS      ++ Q + VS+                         
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQ------------------------- 120

Query: 121 PPATVTASSPAPAPAPAPAPAPAPALAPVPAPAPAPAPAPAPVPATSVLPEADVYSQAAS 180
            P + T SS  PA       +P PA +P+PA     A             + D Y QAAS
Sbjct: 121 -PVSATTSSTKPAAPSTTQSSPVPA-SPIPAQEQPAA-------------QTDTYGQAAS 180

Query: 181 NLVAGSNLEETINQILLMGGGLWDRDIVVRALRAAYNNPERAVDYLYSGIPEQEAPPAAR 240
            LV+GS+LE+ + QI+ MGGG WD++ V RALRAAYNNPERAVDYLYSGIP+      A 
Sbjct: 181 TLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQ-----TAE 240

Query: 241 VSSTVPVTNPAAQPAQPAQPASMPSTGPNANPLDLFPQGLPNLASGAVGSGSLDFLRNSP 300
           V+  VP    A   A P  PA   S GPN++PLDLFPQ     A+G+   G+L+FLRN+ 
Sbjct: 241 VAVPVPEAQIAGSGAAPVAPA---SGGPNSSPLDLFPQETV-AAAGSGDLGTLEFLRNND 300

Query: 301 QFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLE---GEGNVLG 360
           QFQ LR MV +NPQILQPMLQELGKQNPQL+RLIQ++Q +FL+L+NEP E   GEG++  
Sbjct: 301 QFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFD 360

Query: 361 QLAEATPHAITVTPEEREAIQRLEDLGFDRALVLEVFFACNKNEEMAANYLLDHIHEFED 418
           Q  +  PHAI VTP E+EAIQRLE +GFDRALV+E F AC++NEE+AANYLL++  +FED
Sbjct: 361 QPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 371

[Close]

BLAST of Sed0016702 vs. ExPASy Swiss-Prot
Match: Q84L32 (Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=2 SV=2)

HSP 1 Score: 342.4 bits (877), Expect = 7.1e-93
Identity = 209/420 (49.76%), Postives = 276/420 (65.71%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIHVQPQDTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MK+ VKTLKGSHFEI V P DT+  VKKNIE  Q  D YP  QQ+LIH GKVLKD TTL 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGSSSTTQAAPVSKAPQNTAPAPAATPVLTSEVPLPTSA 120
           ENKV E  F+V+ML+K+K++S    S+TQ                           PTS 
Sbjct: 61  ENKVTEEGFLVVMLSKSKTASSAGPSSTQ---------------------------PTST 120

Query: 121 PPATVTASSPAPAPAPAPAPAPAPALAPVPAPAPAPAPAPAPVPATSVLPEADVYSQAAS 180
             +T+++++ A       AP+   ++A      PA    P     T+   ++D Y QAAS
Sbjct: 121 TTSTISSTTLA-------APSTTQSIA-----VPASNSTPVQEQPTA---QSDTYGQAAS 180

Query: 181 NLVAGSNLEETINQILLMGGGLWDRDIVVRALRAAYNNPERAVDYLYSGIPEQEAPPAAR 240
            LV+GS++E+ + QI+ MGGG WD++ V RALRAAYNNPERAVDYLYSGIPE        
Sbjct: 181 TLVSGSSIEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPE-------- 240

Query: 241 VSSTVPVTNPAAQPAQPAQPASMPSTGPNANPLDLFPQGLPNLASGAVGSGSLDFLRNSP 300
            + T+P TN +   +     A  PS GPN++PLDLFPQ   + A+G    G+L+FLR + 
Sbjct: 241 -TVTIPATNLSGVGSGRELTAPPPSGGPNSSPLDLFPQEAVSDAAGG-DLGTLEFLRGND 300

Query: 301 QFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLE---GEGNVLG 360
           QFQ LR+MV +NPQILQPMLQELGKQNPQL+RLIQ++Q +FL+L+NEP E   G+ ++  
Sbjct: 301 QFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLLNEPYEGSDGDVDIFD 360

Query: 361 QLAEATPHAITVTPEEREAIQRLEDLGFDRALVLEVFFACNKNEEMAANYLLDHIHEFED 418
           Q  +  PH++ VTPEE+E+I+RLE +GFDRA+V+E F +C++NEE+AANYLL+H  +FED
Sbjct: 361 QPDQEMPHSVNVTPEEQESIERLEAMGFDRAIVIEAFLSCDRNEELAANYLLEHSADFED 368

[Close]

BLAST of Sed0016702 vs. ExPASy TrEMBL
Match: A0A6J1G0H9 (Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111449587 PE=3 SV=1)

HSP 1 Score: 690.3 bits (1780), Expect = 5.1e-195
Identity = 379/421 (90.02%), Postives = 390/421 (92.64%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIHVQPQDTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEI VQPQD VADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGSSSTTQAAPVSKAPQNTAPAPAATPVLTSEVPLPTSA 120
           ENKVAENSFIVIMLTKNKSSSGG+SSTTQAAPVSKAPQNTAPAPAATPV TSEVPLPTSA
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATVTASSPAPAPAPAPAPAPAPALAPVPAPAPAPAPAPAPVPATSVLPEADVYSQAAS 180
           PPAT+T SS          PAPAPA AP PAPA APAPAPA  PAT+VLPE+DVYSQAAS
Sbjct: 121 PPATITTSS---------LPAPAPAQAPAPAPAQAPAPAPAQAPATTVLPESDVYSQAAS 180

Query: 181 NLVAGSNLEETINQILLMGGGLWDRDIVVRALRAAYNNPERAVDYLYSGIPEQ-EAPPAA 240
           NLVAGSNLEETI QILLMGGG+WDRD VV+ALRAAYNNPERAVDYLYSGIPEQ E PPAA
Sbjct: 181 NLVAGSNLEETIQQILLMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAA 240

Query: 241 RVSSTVPVTNPAAQPAQPAQPASMPSTGPNANPLDLFPQGLPNLASGAVGSGSLDFLRNS 300
            V STVPVTNP+AQPAQPAQPAS  +TGPNANPLDLFPQG+PNLASGAV SGSLDFLRNS
Sbjct: 241 HVPSTVPVTNPSAQPAQPAQPASATTTGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNS 300

Query: 301 PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL 360
           PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL
Sbjct: 301 PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL 360

Query: 361 AEATPHAITVTPEEREAIQRLEDLGFDRALVLEVFFACNKNEEMAANYLLDHIHEFEDNQ 420
           A+A P AITVTPEEREAIQRLEDLGFDRALV+EVFFACNKNEEMAANYLLDHIHEFE NQ
Sbjct: 361 ADAMPQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQ 412

[Close]

BLAST of Sed0016702 vs. ExPASy TrEMBL
Match: A0A6J1G0K5 (Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111449587 PE=3 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 1.7e-190
Identity = 368/421 (87.41%), Postives = 379/421 (90.02%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIHVQPQDTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEI VQPQD VADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGSSSTTQAAPVSKAPQNTAPAPAATPVLTSEVPLPTSA 120
           ENKVAENSFIVIMLTKNKSSSGG+SSTTQAAPVSKAPQNTAPAPAATPV TSEVPLPTSA
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATVTASSPAPAPAPAPAPAPAPALAPVPAPAPAPAPAPAPVPATSVLPEADVYSQAAS 180
           PPAT+T SS                        PAPAPAPA  PAT+VLPE+DVYSQAAS
Sbjct: 121 PPATITTSS-----------------------LPAPAPAPAQAPATTVLPESDVYSQAAS 180

Query: 181 NLVAGSNLEETINQILLMGGGLWDRDIVVRALRAAYNNPERAVDYLYSGIPEQ-EAPPAA 240
           NLVAGSNLEETI QILLMGGG+WDRD VV+ALRAAYNNPERAVDYLYSGIPEQ E PPAA
Sbjct: 181 NLVAGSNLEETIQQILLMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAA 240

Query: 241 RVSSTVPVTNPAAQPAQPAQPASMPSTGPNANPLDLFPQGLPNLASGAVGSGSLDFLRNS 300
            V STVPVTNP+AQPAQPAQPAS  +TGPNANPLDLFPQG+PNLASGAV SGSLDFLRNS
Sbjct: 241 HVPSTVPVTNPSAQPAQPAQPASATTTGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNS 300

Query: 301 PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL 360
           PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL
Sbjct: 301 PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL 360

Query: 361 AEATPHAITVTPEEREAIQRLEDLGFDRALVLEVFFACNKNEEMAANYLLDHIHEFEDNQ 420
           A+A P AITVTPEEREAIQRLEDLGFDRALV+EVFFACNKNEEMAANYLLDHIHEFE NQ
Sbjct: 361 ADAMPQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQ 398

[Close]

BLAST of Sed0016702 vs. ExPASy TrEMBL
Match: A0A6J1HT74 (Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111467562 PE=3 SV=1)

HSP 1 Score: 672.9 bits (1735), Expect = 8.5e-190
Identity = 367/421 (87.17%), Postives = 378/421 (89.79%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIHVQPQDTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEI VQPQD VADVKK IETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGSSSTTQAAPVSKAPQNTAPAPAATPVLTSEVPLPTSA 120
           ENKVAENSFIVIMLTKNKSSSGG+SSTTQAAPVSKAPQNTAPAPAATPV TSEVPLPTSA
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATVTASSPAPAPAPAPAPAPAPALAPVPAPAPAPAPAPAPVPATSVLPEADVYSQAAS 180
           PPAT+T SS                        PAPAPAPA  PAT+VLPE+DVYSQAAS
Sbjct: 121 PPATITTSS-----------------------LPAPAPAPAQAPATTVLPESDVYSQAAS 180

Query: 181 NLVAGSNLEETINQILLMGGGLWDRDIVVRALRAAYNNPERAVDYLYSGIPEQ-EAPPAA 240
           NLVAGSNLEETI QILLMGGG+WDRD VV+ALRAAYNNPERAVDYLYSGIPEQ E PPAA
Sbjct: 181 NLVAGSNLEETIQQILLMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAA 240

Query: 241 RVSSTVPVTNPAAQPAQPAQPASMPSTGPNANPLDLFPQGLPNLASGAVGSGSLDFLRNS 300
            V STVPVTNP+AQPAQPAQPAS  +TGPNANPLDLFPQG+PNLASGAV SGSLDFLRNS
Sbjct: 241 HVPSTVPVTNPSAQPAQPAQPASATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNS 300

Query: 301 PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL 360
           PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL
Sbjct: 301 PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL 360

Query: 361 AEATPHAITVTPEEREAIQRLEDLGFDRALVLEVFFACNKNEEMAANYLLDHIHEFEDNQ 420
           A+A P AITVTPEEREAIQRLEDLGFDRALV+EVFFACNKNEEMAANYLLDHIHEFE NQ
Sbjct: 361 ADAMPQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQ 398

[Close]

BLAST of Sed0016702 vs. ExPASy TrEMBL
Match: A0A0A0KUH2 (Ubiquitin receptor RAD23 OS=Cucumis sativus OX=3659 GN=Csa_5G608600 PE=3 SV=1)

HSP 1 Score: 669.1 bits (1725), Expect = 1.2e-188
Identity = 369/421 (87.65%), Postives = 386/421 (91.69%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIHVQPQDTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEI VQP DTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKD +TL+
Sbjct: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGSSSTTQAAPVSKAPQNTAPAPAATPVLTSEVPLPTSA 120
           ENKVAENSFIVIMLTKNKSSSGG+SSTT AAPV+KAPQ+TAPAPAATPV T+EVPLPTSA
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTHAAPVAKAPQSTAPAPAATPVSTTEVPLPTSA 120

Query: 121 PPATVTASSPAPAPAPAPAPAPAPALAPVPAPAPAPAPAPAPVPATSVLPEADVYSQAAS 180
           PPA+VTASSP PAP+P P P PAPA AP P P P PA APAP  AT+VLP+ADVYSQAAS
Sbjct: 121 PPASVTASSP-PAPSPTPVPVPAPAPAPTPTPTPTPAAAPAPSLATTVLPDADVYSQAAS 180

Query: 181 NLVAGSNLEETINQILLMGGGLWDRDIVVRALRAAYNNPERAVDYLYSGIPEQEAPPAAR 240
           NLVAGSNLEET+ QIL MG G+WDRD VVRALRAAYNNPERAVDYLYSGIPEQ   P AR
Sbjct: 181 NLVAGSNLEETVQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSGIPEQVEAPPAR 240

Query: 241 VSSTVPVTNPAAQPAQPAQPASMP-STGPNANPLDLFPQGLPNLASGAVGSGSLDFLRNS 300
           V STV  +NP+AQPAQPAQPAS P STGPNANPLDLFPQGLPNL SGAVGSGSLDFLRNS
Sbjct: 241 VPSTVQASNPSAQPAQPAQPASAPSSTGPNANPLDLFPQGLPNLGSGAVGSGSLDFLRNS 300

Query: 301 PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQL 360
           PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGN+LGQL
Sbjct: 301 PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQL 360

Query: 361 AEATPHAITVTPEEREAIQRLEDLGFDRALVLEVFFACNKNEEMAANYLLDHIHEFEDNQ 420
           AEA P AITVTPEEREAIQRLED+GFDR LV+EVFFACNKNEEMAANYLLDHIHEFE NQ
Sbjct: 361 AEAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYLLDHIHEFEGNQ 420

[Close]

BLAST of Sed0016702 vs. ExPASy TrEMBL
Match: A0A1S3BEW2 (Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103489268 PE=3 SV=1)

HSP 1 Score: 668.7 bits (1724), Expect = 1.6e-188
Identity = 369/422 (87.44%), Postives = 388/422 (91.94%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIHVQPQDTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEI VQP DTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKD +TL+
Sbjct: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGSSSTTQAAPVSKAPQNTAPAPAATPVLTSEVPLPTSA 120
           ENKVAENSFIVIMLTKNKSSSGG+SSTTQAAPVSKAPQ+TAPAPAATPV T+EVPLPTSA
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQSTAPAPAATPVSTTEVPLPTSA 120

Query: 121 PPATVTASS-PAPAPAPAPAPAPAPALAPVPAPAPAPAPAPAPVPATSVLPEADVYSQAA 180
           PPA+VTA+S PAP+PAPAPAPA  PA AP   P P P PA AP PAT+VLPE DVYSQAA
Sbjct: 121 PPASVTAASPPAPSPAPAPAPASTPAPAPASTPTPTPTPAAAPAPATTVLPETDVYSQAA 180

Query: 181 SNLVAGSNLEETINQILLMGGGLWDRDIVVRALRAAYNNPERAVDYLYSGIPEQEAPPAA 240
           SNLVAGSNLEETI QIL MG G+WDRD VVRALRAAYNNPERAVDYLYSGIPEQ   P A
Sbjct: 181 SNLVAGSNLEETIQQILDMGEGVWDRDTVVRALRAAYNNPERAVDYLYSGIPEQVEAPPA 240

Query: 241 RVSSTVPVTNPAAQPAQPAQPASMPST-GPNANPLDLFPQGLPNLASGAVGSGSLDFLRN 300
           RV STV  +NP+AQPAQPAQPAS+PS+ GPNANPLDLFPQGLPN+ SGAVGSGSLDFLRN
Sbjct: 241 RVPSTVQASNPSAQPAQPAQPASVPSSAGPNANPLDLFPQGLPNIGSGAVGSGSLDFLRN 300

Query: 301 SPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQ 360
           SPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGN+LGQ
Sbjct: 301 SPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQ 360

Query: 361 LAEATPHAITVTPEEREAIQRLEDLGFDRALVLEVFFACNKNEEMAANYLLDHIHEFEDN 420
           LAEA P AITVTPEEREAIQRLED+GFDR LV+EVFFACNKNEEMAANYLLDHIHEFE +
Sbjct: 361 LAEAMPQAITVTPEEREAIQRLEDMGFDRGLVVEVFFACNKNEEMAANYLLDHIHEFEGD 420

[Close]

BLAST of Sed0016702 vs. TAIR 10
Match: AT3G02540.3 (Rad23 UV excision repair protein family )

HSP 1 Score: 470.3 bits (1209), Expect = 1.6e-132
Identity = 275/425 (64.71%), Postives = 324/425 (76.24%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIHVQPQDTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKG+HFEI V+P+D+V DVKKNIE+VQGADVYPAA+QMLIHQGKVLKD TT++
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGSSSTTQAAPVSKAPQNTAPAPAATPVLTSEVPLPTSA 120
           ENKVAENSFIVIM+ K+K +S  +SS +     +K    + P   + P ++ + P   SA
Sbjct: 61  ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAK----SIPPSTSQPSISPQTPASVSA 120

Query: 121 P--PATVTASSPAPAPAPAPAPAPAPALAPVPAPAPAPAPAPAPVPATSVLPEADVYSQA 180
           P  PA      PAP P PAP  A      P+P P PA   +  P P ++ + + DVY QA
Sbjct: 121 PVAPAPTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGQGDVYGQA 180

Query: 181 ASNLVAGSNLEETINQILLMGGGLWDRDIVVRALRAAYNNPERAVDYLYSGIPEQ-EAPP 240
           ASNL AGSNLE TI QIL MGGG WDR+ VV ALRAA+NNPERAV+YLY+GIPEQ E PP
Sbjct: 181 ASNLAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVPP 240

Query: 241 AARVSSTVPVTNPAAQPAQPAQPASMPSTGPNANPLDLFPQGLPNLASGAVGSGSLDFLR 300
            AR  ++     PA  PAQ  QPA+ P++GPNANPLDLFPQGLPN+  G  G+G+LDFLR
Sbjct: 241 VARPPAS--AGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNV-GGNPGAGTLDFLR 300

Query: 301 NSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEG---EGN 360
           NS QFQALRAMV+ANPQ+LQPMLQELGKQNP L+RLIQDHQ DFLRLINEP+EG    GN
Sbjct: 301 NSQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGN 360

Query: 361 VLGQLAEA--TPHAITVTPEEREAIQRLEDLGFDRALVLEVFFACNKNEEMAANYLLDHI 418
           +LGQ+A     P AI VT EEREAI+RLE +GF+RALVLEVFFACNKNEE+AANYLLDH+
Sbjct: 361 LLGQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHM 418

[Close]

BLAST of Sed0016702 vs. TAIR 10
Match: AT3G02540.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 468.8 bits (1205), Expect = 4.7e-132
Identity = 276/426 (64.79%), Postives = 321/426 (75.35%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIHVQPQDTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKG+HFEI V+P+D+V DVKKNIE+VQGADVYPAA+QMLIHQGKVLKD TT++
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGSSSTTQAAPVSKAPQNTAPAPAATPVLTSEVPLPTSA 120
           ENKVAENSFIVIM+ K+K +S  +SS +     +K    + P   + P ++ + P   SA
Sbjct: 61  ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAK----SIPPSTSQPSISPQTPASVSA 120

Query: 121 PPATVTASSPAPAPAPAPAPAPAPALAPVPAPAPAPAPAPAPVPATSVLP---EADVYSQ 180
           P A      P PAP P PAP  A      P P P PA   +  PA    P   + DVY Q
Sbjct: 121 PVAPAPTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGSQGDVYGQ 180

Query: 181 AASNLVAGSNLEETINQILLMGGGLWDRDIVVRALRAAYNNPERAVDYLYSGIPEQ-EAP 240
           AASNL AGSNLE TI QIL MGGG WDR+ VV ALRAA+NNPERAV+YLY+GIPEQ E P
Sbjct: 181 AASNLAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVP 240

Query: 241 PAARVSSTVPVTNPAAQPAQPAQPASMPSTGPNANPLDLFPQGLPNLASGAVGSGSLDFL 300
           P AR  ++     PA  PAQ  QPA+ P++GPNANPLDLFPQGLPN+  G  G+G+LDFL
Sbjct: 241 PVARPPAS--AGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNV-GGNPGAGTLDFL 300

Query: 301 RNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEG---EG 360
           RNS QFQALRAMV+ANPQ+LQPMLQELGKQNP L+RLIQDHQ DFLRLINEP+EG    G
Sbjct: 301 RNSQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESG 360

Query: 361 NVLGQLAEA--TPHAITVTPEEREAIQRLEDLGFDRALVLEVFFACNKNEEMAANYLLDH 418
           N+LGQ+A     P AI VT EEREAI+RLE +GF+RALVLEVFFACNKNEE+AANYLLDH
Sbjct: 361 NLLGQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDH 419

[Close]

BLAST of Sed0016702 vs. TAIR 10
Match: AT5G38470.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 448.4 bits (1152), Expect = 6.5e-126
Identity = 269/419 (64.20%), Postives = 307/419 (73.27%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIHVQPQDTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTL GS+FEI V+P D V+DVK  IETV+GA+ YPAA+QMLIHQGKVLKD TTL+
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGSSSTTQAAPVSKAPQNTAPAPAATPVLTSEVPLPTSA 120
           EN V ENSFIVIML+K K+S  G+S  T +AP   AP  T P   ATP          SA
Sbjct: 61  ENNVVENSFIVIMLSKTKASPSGAS--TASAP---APSATQPQTVATP--------QVSA 120

Query: 121 PPATVTASSPAPAPAPAPAPAPAPALAPVPAPAPAPAPAPAPVPATSVLPEADVYSQAAS 180
           P A+V                          P P    A A  PAT+   + DVY QAAS
Sbjct: 121 PTASV--------------------------PVPTSGTATAAAPATAASVQTDVYGQAAS 180

Query: 181 NLVAGSNLEETINQILLMGGGLWDRDIVVRALRAAYNNPERAVDYLYSGIPEQ-EAPPAA 240
           NLVAG+ LE T+ QIL MGGG WDRD VVRALRAA+NNPERAV+YLYSGIP Q E PP A
Sbjct: 181 NLVAGTTLESTVQQILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIPPVA 240

Query: 241 RVSST-VPVTNPAAQPAQPAQPASMPSTGPNANPLDLFPQGLPNLASGAVGSGSLDFLRN 300
           +  +T     NP AQP Q A PA+  + GPNANPL+LFPQG+P   +GA G+G+LDFLRN
Sbjct: 241 QAPATGEQAANPLAQPQQAAAPAA-ATGGPNANPLNLFPQGMPAADAGA-GAGNLDFLRN 300

Query: 301 SPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQ 360
           S QFQALRAMV+ANPQILQPMLQELGKQNPQL+RLIQ+HQ DFLRLINEP+EGE NV+ Q
Sbjct: 301 SQQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVEGEENVMEQ 360

Query: 361 LAEATPHAITVTPEEREAIQRLEDLGFDRALVLEVFFACNKNEEMAANYLLDHIHEFED 418
           L  A P A+TVTPEEREAI+RLE +GFDRA+VLEVFFACNKNEE+AANYLLDH+HEFED
Sbjct: 361 LEAAMPQAVTVTPEEREAIERLEGMGFDRAMVLEVFFACNKNEELAANYLLDHMHEFED 377

[Close]

BLAST of Sed0016702 vs. TAIR 10
Match: AT1G79650.2 (Rad23 UV excision repair protein family )

HSP 1 Score: 365.2 bits (936), Expect = 7.3e-101
Identity = 224/420 (53.33%), Postives = 273/420 (65.00%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIHVQPQDTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MK+ VKTLKGSHFEI V P DT+  VKKNIE  QG D YP  QQ+LIH GKVLKD T+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGSSSTTQAAPVSKAPQNTAPAPAATPVLTSEVPLPTSA 120
           ENKV E  F+V+ML+K+K  SGGS+      PVS    +T PA  +T             
Sbjct: 61  ENKVTEEGFLVVMLSKSK--SGGSAGQASVQPVSATTSSTKPAAPST------------- 120

Query: 121 PPATVTASSPAPAPAPAPAPAPAPALAPVPAPAPAPAPAPAPVPATSVLPEADVYSQAAS 180
                T SSP PA             +P+PA     A             + D Y QAAS
Sbjct: 121 -----TQSSPVPA-------------SPIPAQEQPAA-------------QTDTYGQAAS 180

Query: 181 NLVAGSNLEETINQILLMGGGLWDRDIVVRALRAAYNNPERAVDYLYSGIPEQEAPPAAR 240
            LV+GS+LE+ + QI+ MGGG WD++ V RALRAAYNNPERAVDYLYSGIP+      A 
Sbjct: 181 TLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQ-----TAE 240

Query: 241 VSSTVPVTNPAAQPAQPAQPASMPSTGPNANPLDLFPQGLPNLASGAVGSGSLDFLRNSP 300
           V+  VP    A   A P  PA   S GPN++PLDLFPQ     A+G+   G+L+FLRN+ 
Sbjct: 241 VAVPVPEAQIAGSGAAPVAPA---SGGPNSSPLDLFPQETV-AAAGSGDLGTLEFLRNND 300

Query: 301 QFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLE---GEGNVLG 360
           QFQ LR MV +NPQILQPMLQELGKQNPQL+RLIQ++Q +FL+L+NEP E   GEG++  
Sbjct: 301 QFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFD 360

Query: 361 QLAEATPHAITVTPEEREAIQRLEDLGFDRALVLEVFFACNKNEEMAANYLLDHIHEFED 418
           Q  +  PHAI VTP E+EAIQRLE +GFDRALV+E F AC++NEE+AANYLL++  +FED
Sbjct: 361 QPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 365

[Close]

BLAST of Sed0016702 vs. TAIR 10
Match: AT1G79650.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 354.4 bits (908), Expect = 1.3e-97
Identity = 220/420 (52.38%), Postives = 272/420 (64.76%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIHVQPQDTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MK+ VKTLKGSHFEI V P DT+  VKKNIE  QG D YP  QQ+LIH GKVLKD T+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGSSSTTQAAPVSKAPQNTAPAPAATPVLTSEVPLPTSA 120
           ENKV E  F+V+ML+K+KS      ++ Q + VS+                         
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQ------------------------- 120

Query: 121 PPATVTASSPAPAPAPAPAPAPAPALAPVPAPAPAPAPAPAPVPATSVLPEADVYSQAAS 180
            P + T SS  PA       +P PA +P+PA     A             + D Y QAAS
Sbjct: 121 -PVSATTSSTKPAAPSTTQSSPVPA-SPIPAQEQPAA-------------QTDTYGQAAS 180

Query: 181 NLVAGSNLEETINQILLMGGGLWDRDIVVRALRAAYNNPERAVDYLYSGIPEQEAPPAAR 240
            LV+GS+LE+ + QI+ MGGG WD++ V RALRAAYNNPERAVDYLYSGIP+      A 
Sbjct: 181 TLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQ-----TAE 240

Query: 241 VSSTVPVTNPAAQPAQPAQPASMPSTGPNANPLDLFPQGLPNLASGAVGSGSLDFLRNSP 300
           V+  VP    A   A P  PA   S GPN++PLDLFPQ     A+G+   G+L+FLRN+ 
Sbjct: 241 VAVPVPEAQIAGSGAAPVAPA---SGGPNSSPLDLFPQETV-AAAGSGDLGTLEFLRNND 300

Query: 301 QFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLE---GEGNVLG 360
           QFQ LR MV +NPQILQPMLQELGKQNPQL+RLIQ++Q +FL+L+NEP E   GEG++  
Sbjct: 301 QFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFD 360

Query: 361 QLAEATPHAITVTPEEREAIQRLEDLGFDRALVLEVFFACNKNEEMAANYLLDHIHEFED 418
           Q  +  PHAI VTP E+EAIQRLE +GFDRALV+E F AC++NEE+AANYLL++  +FED
Sbjct: 361 QPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 371

The following BLAST results are available for this feature:

BLAST of Sed0016702 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945311.1	1.1e-194	90.02	ubiquitin receptor RAD23d-like isoform X1 [Cucurbita moschata]	[more]
KAG7013030.1	4.2e-191	87.89	Ubiquitin receptor RAD23c, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022945312.1	3.5e-190	87.41	ubiquitin receptor RAD23d-like isoform X2 [Cucurbita moschata]	[more]
XP_022968287.1	1.7e-189	87.17	ubiquitin receptor RAD23d-like [Cucurbita maxima]	[more]
KAG6601319.1	1.9e-188	87.65	Ubiquitin receptor RAD23c, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0016702 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84L31	6.6e-131	64.79	Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2	[more]
Q84L30	9.2e-125	64.20	Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2	[more]
Q40742	4.9e-110	58.95	Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RA...	[more]
Q84L33	1.8e-96	52.38	Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3	[more]
Q84L32	7.1e-93	49.76	Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=...	[more]

BLAST of Sed0016702 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G0H9	5.1e-195	90.02	Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111449587 PE=3 SV=1	[more]
A0A6J1G0K5	1.7e-190	87.41	Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111449587 PE=3 SV=1	[more]
A0A6J1HT74	8.5e-190	87.17	Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111467562 PE=3 SV=1	[more]
A0A0A0KUH2	1.2e-188	87.65	Ubiquitin receptor RAD23 OS=Cucumis sativus OX=3659 GN=Csa_5G608600 PE=3 SV=1	[more]
A0A1S3BEW2	1.6e-188	87.44	Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103489268 PE=3 SV=1	[more]

BLAST of Sed0016702 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02540.3	1.6e-132	64.71	Rad23 UV excision repair protein family	[more]
AT3G02540.1	4.7e-132	64.79	Rad23 UV excision repair protein family	[more]
AT5G38470.1	6.5e-126	64.20	Rad23 UV excision repair protein family	[more]
AT1G79650.2	7.3e-101	53.33	Rad23 UV excision repair protein family	[more]
AT1G79650.1	1.3e-97	52.38	Rad23 UV excision repair protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004806	UV excision repair protein Rad23	PRINTS	PR01839	RAD23PROTEIN	coord: 367..383 score: 61.76 coord: 319..341 score: 58.89 coord: 384..398 score: 64.24 coord: 399..414 score: 61.36
IPR004806	UV excision repair protein Rad23	TIGRFAM	TIGR00601	TIGR00601	coord: 1..416 e-value: 2.3E-109 score: 364.0
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 1..75 e-value: 1.3E-21 score: 87.8
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 3..76 e-value: 2.1E-18 score: 65.8
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..79 score: 19.78216
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 373..410 e-value: 3.3E-8 score: 43.3 coord: 188..228 e-value: 2.0E-6 score: 37.4
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 188..226 e-value: 7.7E-13 score: 48.0 coord: 373..408 e-value: 5.5E-11 score: 42.1
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 186..229 score: 12.426409
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 370..411 score: 14.426468
IPR006636	Heat shock chaperonin-binding	SMART	SM00727	CBM	coord: 291..334 e-value: 6.6E-6 score: 35.6
None	No IPR available	GENE3D	1.10.8.10		coord: 181..231 e-value: 2.2E-20 score: 74.2
None	No IPR available	GENE3D	1.10.8.10		coord: 364..412 e-value: 3.5E-23 score: 83.3
None	No IPR available	GENE3D	3.10.20.90		coord: 1..80 e-value: 4.1E-29 score: 102.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 241..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 242..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..145
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 1..131
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 123..416
None	No IPR available	PANTHER	PTHR10621:SF46	EXCISION REPAIR PROTEIN RAD23, PUTATIVE-RELATED	coord: 123..416 coord: 1..131
None	No IPR available	CDD	cd01805	Ubl_Rad23	coord: 1..74 e-value: 8.63314E-30 score: 108.413
IPR036353	XPC-binding domain superfamily	GENE3D	1.10.10.540		coord: 283..348 e-value: 6.4E-27 score: 94.9
IPR036353	XPC-binding domain superfamily	SUPERFAMILY	101238	XPC-binding domain	coord: 289..354
IPR015360	XPC-binding domain	PFAM	PF09280	XPC-binding	coord: 293..348 e-value: 3.9E-22 score: 77.8
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..79
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 353..415
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 173..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016702.1	Sed0016702.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding
molecular_function	GO:0070628	proteasome binding
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0005515	protein binding