Sed0016692 (gene) Chayote v1

Overview


Name	Sed0016692
Type	gene
Organism	Sechium edule (Chayote v1)
Description	psbP-like protein 1, chloroplastic
Location	LG03: 341959 .. 344720 (+)
RNA-Seq Expression	Sed0016692
Synteny	Sed0016692

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTACCATATCCATTTTTTTAAATTTTTTTATTATTAATATATATAAATAGAAGAAAGCACAAAAATGGGTGAGGCTGAGCGAACACAAGGGATAGGAAATCCAAGAAGCGAGGCAAAGGATAAGGTCTCATCTCACATTCACAACCAAAGCTAAGCTAAGGATCTTCTTCCATGGCTTCCCTCCATAACTCCCTCTTCCTCAATTCTCTTCCTCAGGTACACATCATCTCCTTCATAATCCTTTCTGTTCTCTCCCCATTCCGTTTTCTCATGAACCCCACCCGCTCCCCCAGAAACTCCATGGAAGAGTTGTTTGCTGCAGAGCCGGGATTTCTCTTCTCCTCAGGCCCCACCCACCGCGCCAATCTTCCATCAATCCCCAAGGTCTGTCTGTTCGGTTCTTACTTCAATTACTGTCTCTCATTTTGTTAAGTATCCACATCATTTGATGCAACTAAATGGAGGGTGTACAGACAAGGTTTTATCACTCTCAATCATCGGTTACTGAATATTGACATAATAGAAAAAATTTAGTAATATCACTTAAATCGCATTTTCTGGCCTATATACCTTTTCCTTCTCACTGCATACTTATCAACGCTATAGAAAGTATACTATAAAATTTCATTGTTCAATAGTTCTGTTTTTTGGCAGATAGACTTGCGAGACGCCAGCTGCTAGCCGGCAGTGCATTTATCACTTGGATTTCACTTGCAGACATGAATTCCATGTCATGTAAGATTTATCGCTCCTATAACTTACCAATTCCATACACTTTCCTTTATTTCTCTCTTCCAAATTGAAGGATGATGATATCCTAAGAGTACCATCTTGATATTGCTCAGTTGCTGCTGAAACAAAGAAAGGGTTTCTATCAGTTACAGACAACAAAGACGGTTACTCATTTGTCTATCCATTTGGGTGGCAGGTACACTAGTTGTGTTCAGTTTTTGGTTTCCTCCACTCCCTTACTTTTGCACACAATCTACTTTAAATTTAACTACTTGCCACGAGATGCACGATTCAAAGTCTTTTTACACTCGAGGAGTGAGCAGGAAGTAGTTATTGATGGTCAAGATAAGGTATTCAAGGATGTAATTGAACCATTAGAAAGTGTCAGTGTCAATGTGATTCCAACCAACAAAGAAGATATTAGAGATTTTGGGCCACCTCAACAGGTTAGCAATAAAATGTTAGAATAATGCAATAAGTTGTTTTAACTTTTCAGTAACTTCAGTTAGTATCGTATGGTTCAGGTTGCAGAAACTTTGATAAAGAAGGTTCTAGCTCCTTCTAATCAAAAAACAAAGTTAATCGAAGCATCAGAGGTTTGACTATCTATACTCTTGTCTTGGATTTTTTTTCAAACCAGTAGCTATCGAGTGAAAATAAATAGTTGTAAATGAACTTACCGGTTAAATCTGATGCACAAGCATCACTCAACACTATGGTGGAAGGTTCTTCCGCAATTATCCTTGGCAACGTTGTAAATGAATCTTCTGAAATGGAATATACACTCAAAAGGTAAACCAATTCACTTATGTAAGCTGTGAAGTGAAGTCCATCATTTCACCCCTTTATTCCAAATACGTGACTATGTATAACCCACTCCAATTCACTTATGTCACTTCTTGGCCATCTTACCTTCATTTTGCTGTATAATATATGCTATAAACTACACTTTTGCACACGTTTCTTCAAGACAGCTCTCATTGTGAAAACCTAATAGAAAAAAGAGAGAACAACCAATAAGCTGCTTATTAACTTTTTTTAACGCTCAAAAGCTAGTCCATGTGAGAAAGTGACCTAAGTTGTTCAGTAAATTGCTTTGTTTAATTCATTTGACTCTTGGTTGAATAATGTTGTAACTTGCCTCGTACGAGATTTGGAGGAGTTCAAATTTGTCTGACTTGTCAAGCTTTTGTTATTGTATACTAATACAATTTGCTATGTGCTCATCGGTTTTTCCTGACGAATGATACAGCATGACGTTAATGGGAAAGCTTACTACACATTTGAGTTTGTAGCCCAAGCTCCAAACTACACTCGCCACGCTCTTAGCACAATTGCAGTTGCCAATGGTACGCAACTTCGATATTCTTAGTTTACTGTGGCTGTAGAACTTTTCCAAGTTTGTTCTATTCTATTCCAGTCTTTGAGGCCTGACCATAAATTGTCTCCAGAATAGTTTGTTGTTGTTTTCAAAATTTTCTAAGAACCATAATCAAATGACATTATAGTTAGTTTTTAGTTTCAGTTCACAGTGATCACGTACTTAGAAATAGGAATTAATCTTCCATAGATTTTTTTGACATTCAAATGTTGTAGAGTTGGACAACATGTTTCTTGCAAATAGCTGAAGTGTGTGGAAACTTGCTCGAAACATAAAAAGAAAACTCTTTTTTTACGTCTATCCTTAATTCTTGAATGGCAGGAAAATTCTACACATTGACAACAGGAGCAAATGAGAGGAGGTGGGAGAAAATGAAAGATAAATTGCGCACAGTTGTTGATTCCTTCACAACTTCAACCGTTTGATGGGGTTTCCCTGTGAACACATTTTATCATTATTCCAACGCCATTTTGATTCTCCAGGTTGTTTAGAACTAAACTTCAGTAACGTATCCATACCTTTTGTGCTTTAATTATTCAGGTTGAGTGAGTTTAGAGCGGTTGCAACTTCTTGTATTGTCGAATGTATATGTAAAAGAATGCAATTACACCAAATTGTTTCATCTCAGTCCTATATTCTTCTTGGTCTC

mRNA sequence

TTACCATATCCATTTTTTTAAATTTTTTTATTATTAATATATATAAATAGAAGAAAGCACAAAAATGGGTGAGGCTGAGCGAACACAAGGGATAGGAAATCCAAGAAGCGAGGCAAAGGATAAGGTCTCATCTCACATTCACAACCAAAGCTAAGCTAAGGATCTTCTTCCATGGCTTCCCTCCATAACTCCCTCTTCCTCAATTCTCTTCCTCAGAAACTCCATGGAAGAGTTGTTTGCTGCAGAGCCGGGATTTCTCTTCTCCTCAGGCCCCACCCACCGCGCCAATCTTCCATCAATCCCCAAGATAGACTTGCGAGACGCCAGCTGCTAGCCGGCAGTGCATTTATCACTTGGATTTCACTTGCAGACATGAATTCCATGTCATTTGCTGCTGAAACAAAGAAAGGGTTTCTATCAGTTACAGACAACAAAGACGGTTACTCATTTGTCTATCCATTTGGGTGGCAGGAAGTAGTTATTGATGGTCAAGATAAGGTATTCAAGGATGTAATTGAACCATTAGAAAGTGTCAGTGTCAATGTGATTCCAACCAACAAAGAAGATATTAGAGATTTTGGGCCACCTCAACAGGTTGCAGAAACTTTGATAAAGAAGGTTCTAGCTCCTTCTAATCAAAAAACAAAGTTAATCGAAGCATCAGAGCATGACGTTAATGGGAAAGCTTACTACACATTTGAGTTTGTAGCCCAAGCTCCAAACTACACTCGCCACGCTCTTAGCACAATTGCAGTTGCCAATGGAAAATTCTACACATTGACAACAGGAGCAAATGAGAGGAGGTGGGAGAAAATGAAAGATAAATTGCGCACAGTTGTTGATTCCTTCACAACTTCAACCGTTTGATGGGGTTTCCCTGTGAACACATTTTATCATTATTCCAACGCCATTTTGATTCTCCAGGTTGTTTAGAACTAAACTTCAGTAACGTATCCATACCTTTTGTGCTTTAATTATTCAGGTTGAGTGAGTTTAGAGCGGTTGCAACTTCTTGTATTGTCGAATGTATATGTAAAAGAATGCAATTACACCAAATTGTTTCATCTCAGTCCTATATTCTTCTTGGTCTC

Coding sequence (CDS)

ATGGCTTCCCTCCATAACTCCCTCTTCCTCAATTCTCTTCCTCAGAAACTCCATGGAAGAGTTGTTTGCTGCAGAGCCGGGATTTCTCTTCTCCTCAGGCCCCACCCACCGCGCCAATCTTCCATCAATCCCCAAGATAGACTTGCGAGACGCCAGCTGCTAGCCGGCAGTGCATTTATCACTTGGATTTCACTTGCAGACATGAATTCCATGTCATTTGCTGCTGAAACAAAGAAAGGGTTTCTATCAGTTACAGACAACAAAGACGGTTACTCATTTGTCTATCCATTTGGGTGGCAGGAAGTAGTTATTGATGGTCAAGATAAGGTATTCAAGGATGTAATTGAACCATTAGAAAGTGTCAGTGTCAATGTGATTCCAACCAACAAAGAAGATATTAGAGATTTTGGGCCACCTCAACAGGTTGCAGAAACTTTGATAAAGAAGGTTCTAGCTCCTTCTAATCAAAAAACAAAGTTAATCGAAGCATCAGAGCATGACGTTAATGGGAAAGCTTACTACACATTTGAGTTTGTAGCCCAAGCTCCAAACTACACTCGCCACGCTCTTAGCACAATTGCAGTTGCCAATGGAAAATTCTACACATTGACAACAGGAGCAAATGAGAGGAGGTGGGAGAAAATGAAAGATAAATTGCGCACAGTTGTTGATTCCTTCACAACTTCAACCGTTTGA

Protein sequence

MASLHNSLFLNSLPQKLHGRVVCCRAGISLLLRPHPPRQSSINPQDRLARRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVTDNKDGYSFVYPFGWQEVVIDGQDKVFKDVIEPLESVSVNVIPTNKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTTSTV

Homology

[Close]

BLAST of Sed0016692 vs. NCBI nr
Match: XP_008463515.1 (PREDICTED: psbP-like protein 1, chloroplastic [Cucumis melo] >TYK05768.1 psbP-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 412.5 bits (1059), Expect = 2.3e-111
Identity = 209/236 (88.56%), Postives = 218/236 (92.37%), Query Frame = 0


Query: 1   MASLHNSLFLNSLPQKLHGRVVCCRAGISLLLRPHPPRQSSIN-----PQDRLARRQLLA 60
           MASL NSLFLNSLPQKLHGR VCCRAG+S L+R      SSIN      +DRL RRQLL+
Sbjct: 1   MASLQNSLFLNSLPQKLHGRFVCCRAGVSFLVRAEQAHGSSINGHACSSEDRLGRRQLLS 60

Query: 61  GSAFITWISLADMNSMSFAAETKKGFLSVTDNKDGYSFVYPFGWQEVVIDGQDKVFKDVI 120
           GSAFITWISLADMNSMSFAAETKKGFLSV+D KDGYSFVYPFGWQEVVIDGQDKVFKDVI
Sbjct: 61  GSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDKVFKDVI 120

Query: 121 EPLESVSVNVIPTNKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYT 180
           EPLESVSVN+IPT+KEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYT
Sbjct: 121 EPLESVSVNLIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYT 180

Query: 181 FEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTTSTV 232
           FEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVV+SFT S+V
Sbjct: 181 FEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVESFTISSV 236

[Close]

BLAST of Sed0016692 vs. NCBI nr
Match: XP_004149814.1 (psbP-like protein 1, chloroplastic [Cucumis sativus] >KGN51262.1 hypothetical protein Csa_008747 [Cucumis sativus])

HSP 1 Score: 412.1 bits (1058), Expect = 3.1e-111
Identity = 208/236 (88.14%), Postives = 218/236 (92.37%), Query Frame = 0


Query: 1   MASLHNSLFLNSLPQKLHGRVVCCRAGISLLLRPHPPRQSSIN-----PQDRLARRQLLA 60
           MASL NSLF+NSLPQKLHGR VCCRAG+S L+R      SSIN      +DRL RRQLL+
Sbjct: 1   MASLQNSLFINSLPQKLHGRFVCCRAGVSFLVRAEQAHGSSINGHACSSEDRLGRRQLLS 60

Query: 61  GSAFITWISLADMNSMSFAAETKKGFLSVTDNKDGYSFVYPFGWQEVVIDGQDKVFKDVI 120
           GSAFITWISLADMNSMSFAAETKKGFLSV+D KDGYSFVYPFGWQEVVIDGQDKVFKDVI
Sbjct: 61  GSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDKVFKDVI 120

Query: 121 EPLESVSVNVIPTNKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYT 180
           EPLE+VSVN+IPT+KEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYT
Sbjct: 121 EPLENVSVNLIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYT 180

Query: 181 FEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTTSTV 232
           FEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFT S+V
Sbjct: 181 FEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTISSV 236

[Close]

BLAST of Sed0016692 vs. NCBI nr
Match: XP_038890216.1 (psbP-like protein 1, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 405.6 bits (1041), Expect = 2.9e-109
Identity = 206/234 (88.03%), Postives = 213/234 (91.03%), Query Frame = 0


Query: 3   SLHNSLFLNSLPQKLHGRVVCCRAGISLLLRPHPPRQSSIN-----PQDRLARRQLLAGS 62
           SL NSLF+NSLPQKLHGR VCCRAG+S LLR      SSIN      +DRL RRQLLAGS
Sbjct: 9   SLQNSLFVNSLPQKLHGRFVCCRAGVSFLLRAEQAHGSSINAHGCSSEDRLGRRQLLAGS 68

Query: 63  AFITWISLADMNSMSFAAETKKGFLSVTDNKDGYSFVYPFGWQEVVIDGQDKVFKDVIEP 122
           AFITWISLADMNSMSFAAETKKGFLSV+D KDGYSFVYPFGWQEVVIDGQDKVFKDVIEP
Sbjct: 69  AFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDKVFKDVIEP 128

Query: 123 LESVSVNVIPTNKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYTFE 182
           LESVSVN+IPT+KEDIRDFG PQQVAETLIKKVLAPSNQ+TKLIEASEHDVNGKAYYTFE
Sbjct: 129 LESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIEASEHDVNGKAYYTFE 188

Query: 183 FVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTTSTV 232
           FVAQAPNYTRHALSTI VANGKFYTLTTGANERRWEKMKDKLRTVVDSFT S V
Sbjct: 189 FVAQAPNYTRHALSTIVVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTISNV 242

[Close]

BLAST of Sed0016692 vs. NCBI nr
Match: XP_023551143.1 (psbP-like protein 1, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 398.7 bits (1023), Expect = 3.5e-107
Identity = 204/242 (84.30%), Postives = 216/242 (89.26%), Query Frame = 0


Query: 1   MASLH------NSLFLNSLPQKLHGRVVCCRAGISLLLRPHPPRQSSIN-----PQDRLA 60
           MASLH       SLF+NSLPQKLHGR VCCRAGIS L+R    R SS+N      +DRL 
Sbjct: 1   MASLHCLPPVQKSLFINSLPQKLHGRSVCCRAGISFLVRAERARGSSVNGHACSSEDRLG 60

Query: 61  RRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVTDNKDGYSFVYPFGWQEVVIDGQDK 120
           RRQLLAGSAFITWI LADMNSMSFAAETKKGFLSV+D KDGYSFVYPFGWQEVVIDGQDK
Sbjct: 61  RRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 120

Query: 121 VFKDVIEPLESVSVNVIPTNKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVN 180
           VFKDVIEPLE+VSVN+IPT+KEDIRDFG PQQ+AETLIKKVLAPSNQ+TKLIEASEHD++
Sbjct: 121 VFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVLAPSNQRTKLIEASEHDID 180

Query: 181 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTTS 232
           GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFT S
Sbjct: 181 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS 240

[Close]

BLAST of Sed0016692 vs. NCBI nr
Match: XP_038890215.1 (psbP-like protein 1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 398.7 bits (1023), Expect = 3.5e-107
Identity = 205/243 (84.36%), Postives = 211/243 (86.83%), Query Frame = 0


Query: 3   SLHNSLFLNSLPQKLHGRVVCCRAGISLLLRPHPPRQSSINPQD--------------RL 62
           SL NSLF+NSLPQKLHGR VCCRAG+S LLR      SSIN                 RL
Sbjct: 9   SLQNSLFVNSLPQKLHGRFVCCRAGVSFLLRAEQAHGSSINAHGCSSEGHFTELRWKIRL 68

Query: 63  ARRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVTDNKDGYSFVYPFGWQEVVIDGQD 122
            RRQLLAGSAFITWISLADMNSMSFAAETKKGFLSV+D KDGYSFVYPFGWQEVVIDGQD
Sbjct: 69  GRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQD 128

Query: 123 KVFKDVIEPLESVSVNVIPTNKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDV 182
           KVFKDVIEPLESVSVN+IPT+KEDIRDFG PQQVAETLIKKVLAPSNQ+TKLIEASEHDV
Sbjct: 129 KVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIEASEHDV 188

Query: 183 NGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTT 232
           NGKAYYTFEFVAQAPNYTRHALSTI VANGKFYTLTTGANERRWEKMKDKLRTVVDSFT 
Sbjct: 189 NGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTI 248

[Close]

BLAST of Sed0016692 vs. ExPASy Swiss-Prot
Match: P82538 (PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 4.8e-75
Identity = 138/209 (66.03%), Postives = 166/209 (79.43%), Query Frame = 0


Query: 19  GRVVCCRAGISLLLR-PHPPRQSSINPQDRLARRQLLAGSAFITWISLADMNSMSFAAET 78
           G +   + G+S L++  H    SS + QD+  RR ++       WISL     +SFAAE+
Sbjct: 18  GVIPSSKKGLSFLVKAEHHSSSSSSHLQDKCQRRLIVTFGVVAPWISLLSRAPLSFAAES 77

Query: 79  KKGFLSVTDNKDGYSFVYPFGWQEVVIDGQDKVFKDVIEPLESVSVNVIPTNKEDIRDFG 138
           KKGFL+V+DNKD Y+F+YPFGWQEVVI+GQDKV+KDVIEPLESVSVN++PT+K+ I++FG
Sbjct: 78  KKGFLAVSDNKDAYAFLYPFGWQEVVIEGQDKVYKDVIEPLESVSVNLVPTSKQTIKEFG 137

Query: 139 PPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYTFEFVAQAPNYTRHALSTIAVAN 198
           PP+Q+AETLIKKVLAP NQKT LI+ASEHDV+GK YY FEF  QA NYTRHAL TI V N
Sbjct: 138 PPKQIAETLIKKVLAPPNQKTTLIDASEHDVDGKTYYQFEFTVQARNYTRHALGTITVFN 197

Query: 199 GKFYTLTTGANERRWEKMKDKLRTVVDSF 227
           G FYTLTTGANERRWEKMKD+L TVVDSF
Sbjct: 198 GNFYTLTTGANERRWEKMKDRLHTVVDSF 226

[Close]

BLAST of Sed0016692 vs. ExPASy Swiss-Prot
Match: O80634 (Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL1 PE=1 SV=2)

HSP 1 Score: 132.1 bits (331), Expect = 8.0e-30
Identity = 69/176 (39.20%), Postives = 97/176 (55.11%), Query Frame = 0


Query: 50  RRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVTDNKDGYSFVYPFGWQEVVIDGQDK 109
           RRQ L G    T ++ +   ++  A E  K +    D +DGYS+ YP  W+E      D 
Sbjct: 59  RRQALVGVG--TLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDS 118

Query: 110 VFKDVIEPLESVSVNVIPTNKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVN 169
            FKD    L++V V  IPT K DI + GP ++V   L+K   A  NQ   + +  E   +
Sbjct: 119 AFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVED 178

Query: 170 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDS 226
           GK YYTFE+  + P Y   + +T+AV N ++YTL  GANERRW K+K +L+ V DS
Sbjct: 179 GKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADS 232

[Close]

BLAST of Sed0016692 vs. ExPASy Swiss-Prot
Match: Q40407 (Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus OX=39639 GN=PSBP PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.1e-10
Identity = 59/210 (28.10%), Postives = 95/210 (45.24%), Query Frame = 0


Query: 47  RLARRQLLAGSAFITWISLADMNSMSFA-----AETKKGFLSVTDNKDGYSFVYPFGW-- 106
           RLA   L+ G+A  + +S AD      A      +T   F +VT   DG+  + P  W  
Sbjct: 58  RLALTILIGGAALGSRVSAADAAYGESANVFGKPKTNTDFQTVTG--DGFKILIPSKWNP 117

Query: 107 -QEVVIDGQDKVFKDVIEPLESVSVNVIPTNKEDIRDFGPPQQ--------------VAE 166
            +EV   GQ   ++D  +   +V V V PT+K+ I+D+G P+Q                +
Sbjct: 118 SKEVEFPGQVLRYEDNFDTTSNVGVMVNPTDKKSIKDYGSPEQFLSQVDYLLGKQAYFGK 177

Query: 167 TLIKKVLAPSNQKT-KLIEASEHDVNGKAYYTFEFV---AQAPNYTRHALSTIAVANGKF 226
           T+ +    P+  +T  ++E S   V GK YY+   +   A      +H L T  V++GK 
Sbjct: 178 TISEGGFEPNAVRTANILETSTPVVGGKDYYSIHVLTRTADGDEGGKHLLITATVSDGKL 237

Query: 227 YTLTTGANERRWEK-MKDKLRTVVDSFTTS 230
           Y     A ++RW K  K  + +   SF+ +
Sbjct: 238 YICKAQAGDKRWFKGAKKFVESAASSFSAA 265

[Close]

BLAST of Sed0016692 vs. ExPASy Swiss-Prot
Match: Q04127 (Oxygen-evolving enhancer protein 2-3, chloroplastic OS=Nicotiana tabacum OX=4097 GN=PSBP3 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.1e-09
Identity = 60/232 (25.86%), Postives = 97/232 (41.81%), Query Frame = 0


Query: 7   SLFLNSLPQKLHGRVVCCRAGISLLLRPHPPRQSSINPQDRLARRQLLAGSAFITWISLA 66
           SL    +P     +++ CRA  +    P     +S++   RLA   L+  +A  + +S A
Sbjct: 20  SLVRGIVPSLKSNQLLVCRAQ-NKQSAPQQDNVNSVSVSRRLALTLLIGAAAVGSKVSPA 79

Query: 67  DM---NSMSFAAETKKGFLSVTDNKDGYSFVYPFGW---QEVVIDGQDKVFKDVIEPLES 126
           D     + +   + K      T N DG+    P  W   +EV   GQ   F+D  +   +
Sbjct: 80  DAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEVEYPGQVLRFEDNFDATSN 139

Query: 127 VSVNVIPTNKEDIRDFGPPQ----QVAETLIKKVLAPSNQK-----------TKLIEASE 186
           V V + PT+K+ I DFG P+    QV   L ++  +                  ++E S 
Sbjct: 140 VIVAITPTDKKSITDFGSPEQFLSQVDYLLGRQAYSGKTDSEGGFESDAVAIANVLETST 199

Query: 187 HDVNGKAYYTFEFVAQAPNYT---RHALSTIAVANGKFYTLTTGANERRWEK 215
            +V GK YY    + +  +     +H L T  V +GK Y     A ++RW K
Sbjct: 200 AEVGGKQYYYLSILTRTADGNEGGKHQLVTATVNDGKLYICKAQAGDKRWFK 250

[Close]

BLAST of Sed0016692 vs. ExPASy Swiss-Prot
Match: P18212 (Oxygen-evolving enhancer protein 2-2, chloroplastic OS=Nicotiana tabacum OX=4097 GN=PSBP2 PE=1 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 7.8e-09
Identity = 58/226 (25.66%), Postives = 94/226 (41.59%), Query Frame = 0


Query: 13  LPQKLHGRVVCCRAGISLLLRPHPPRQSSINPQDRLARRQLLAGSAFITWISLADM---N 72
           +P     +++ CRA       P     +S++   RLA   L+  +A  + +S AD     
Sbjct: 26  VPSLKPNQLLVCRA--QKQSAPQEDNVNSVSVSRRLALTVLIGAAAVGSKVSPADAAYGE 85

Query: 73  SMSFAAETKKGFLSVTDNKDGYSFVYPFGW---QEVVIDGQDKVFKDVIEPLESVSVNVI 132
           + +   + K      T N DG+    P  W   +EV   GQ   F+D  +   +V V + 
Sbjct: 86  AANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEVEYPGQVLRFEDNFDATSNVIVAIT 145

Query: 133 PTNKEDIRDFGPPQ----QVAETLIKKVLAPSNQK-----------TKLIEASEHDVNGK 192
           PT+K+ I DFG P+    QV   L ++  +                  ++E S  +V GK
Sbjct: 146 PTDKKSITDFGSPEQFLSQVDYLLGRQAYSGKTDSEGGFESDAVAIANVLETSSAEVGGK 205

Query: 193 AYYTFEFVAQAPNYT---RHALSTIAVANGKFYTLTTGANERRWEK 215
            YY    + +  +     +H L T  V +GK Y     A ++RW K
Sbjct: 206 PYYYLSVLTRTADGNEGGKHQLITATVNDGKLYICKAQAGDKRWFK 249

[Close]

BLAST of Sed0016692 vs. ExPASy TrEMBL
Match: A0A5D3C3H9 (PsbP-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002630 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.1e-111
Identity = 209/236 (88.56%), Postives = 218/236 (92.37%), Query Frame = 0


Query: 1   MASLHNSLFLNSLPQKLHGRVVCCRAGISLLLRPHPPRQSSIN-----PQDRLARRQLLA 60
           MASL NSLFLNSLPQKLHGR VCCRAG+S L+R      SSIN      +DRL RRQLL+
Sbjct: 1   MASLQNSLFLNSLPQKLHGRFVCCRAGVSFLVRAEQAHGSSINGHACSSEDRLGRRQLLS 60

Query: 61  GSAFITWISLADMNSMSFAAETKKGFLSVTDNKDGYSFVYPFGWQEVVIDGQDKVFKDVI 120
           GSAFITWISLADMNSMSFAAETKKGFLSV+D KDGYSFVYPFGWQEVVIDGQDKVFKDVI
Sbjct: 61  GSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDKVFKDVI 120

Query: 121 EPLESVSVNVIPTNKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYT 180
           EPLESVSVN+IPT+KEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYT
Sbjct: 121 EPLESVSVNLIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYT 180

Query: 181 FEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTTSTV 232
           FEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVV+SFT S+V
Sbjct: 181 FEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVESFTISSV 236

[Close]

BLAST of Sed0016692 vs. ExPASy TrEMBL
Match: A0A1S3CJG4 (psbP-like protein 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501654 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.1e-111
Identity = 209/236 (88.56%), Postives = 218/236 (92.37%), Query Frame = 0


Query: 1   MASLHNSLFLNSLPQKLHGRVVCCRAGISLLLRPHPPRQSSIN-----PQDRLARRQLLA 60
           MASL NSLFLNSLPQKLHGR VCCRAG+S L+R      SSIN      +DRL RRQLL+
Sbjct: 1   MASLQNSLFLNSLPQKLHGRFVCCRAGVSFLVRAEQAHGSSINGHACSSEDRLGRRQLLS 60

Query: 61  GSAFITWISLADMNSMSFAAETKKGFLSVTDNKDGYSFVYPFGWQEVVIDGQDKVFKDVI 120
           GSAFITWISLADMNSMSFAAETKKGFLSV+D KDGYSFVYPFGWQEVVIDGQDKVFKDVI
Sbjct: 61  GSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDKVFKDVI 120

Query: 121 EPLESVSVNVIPTNKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYT 180
           EPLESVSVN+IPT+KEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYT
Sbjct: 121 EPLESVSVNLIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYT 180

Query: 181 FEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTTSTV 232
           FEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVV+SFT S+V
Sbjct: 181 FEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVESFTISSV 236

[Close]

BLAST of Sed0016692 vs. ExPASy TrEMBL
Match: A0A0A0KS54 (PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G505230 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.5e-111
Identity = 208/236 (88.14%), Postives = 218/236 (92.37%), Query Frame = 0


Query: 1   MASLHNSLFLNSLPQKLHGRVVCCRAGISLLLRPHPPRQSSIN-----PQDRLARRQLLA 60
           MASL NSLF+NSLPQKLHGR VCCRAG+S L+R      SSIN      +DRL RRQLL+
Sbjct: 1   MASLQNSLFINSLPQKLHGRFVCCRAGVSFLVRAEQAHGSSINGHACSSEDRLGRRQLLS 60

Query: 61  GSAFITWISLADMNSMSFAAETKKGFLSVTDNKDGYSFVYPFGWQEVVIDGQDKVFKDVI 120
           GSAFITWISLADMNSMSFAAETKKGFLSV+D KDGYSFVYPFGWQEVVIDGQDKVFKDVI
Sbjct: 61  GSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDKVFKDVI 120

Query: 121 EPLESVSVNVIPTNKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYT 180
           EPLE+VSVN+IPT+KEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYT
Sbjct: 121 EPLENVSVNLIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYT 180

Query: 181 FEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTTSTV 232
           FEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFT S+V
Sbjct: 181 FEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTISSV 236

[Close]

BLAST of Sed0016692 vs. ExPASy TrEMBL
Match: A0A6J1JSB4 (psbP-like protein 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489333 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 8.4e-107
Identity = 203/242 (83.88%), Postives = 215/242 (88.84%), Query Frame = 0


Query: 1   MASLH------NSLFLNSLPQKLHGRVVCCRAGISLLLRPHPPRQSSIN-----PQDRLA 60
           MASLH       SLF+NSLPQKLHGR VCCRAGIS L+R    R SS+N      +DRL 
Sbjct: 1   MASLHCLPPVQKSLFINSLPQKLHGRSVCCRAGISFLVRAERARGSSVNGHACSSEDRLG 60

Query: 61  RRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVTDNKDGYSFVYPFGWQEVVIDGQDK 120
           RRQLLAGSAFITWI LADMN MSFAAETKKGFLSV+D KDGYSFVYPFGWQEVVIDGQDK
Sbjct: 61  RRQLLAGSAFITWIYLADMNFMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 120

Query: 121 VFKDVIEPLESVSVNVIPTNKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVN 180
           VFKDVIEPLE+VSVN+IPT+KEDIRDFG PQQ+AETLIKKVLAPSNQ+TKLIEASEHD++
Sbjct: 121 VFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVLAPSNQRTKLIEASEHDID 180

Query: 181 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTTS 232
           GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFT S
Sbjct: 181 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS 240

[Close]

BLAST of Sed0016692 vs. ExPASy TrEMBL
Match: A0A6J1BYZ6 (psbP-like protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006749 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 4.2e-106
Identity = 203/242 (83.88%), Postives = 214/242 (88.43%), Query Frame = 0


Query: 1   MASLH------NSLFLNSLPQKLHGRVVCCRAGISLLLRPHPPRQSSIN-----PQDRLA 60
           MASLH      NSLF+NSL QKL GR +CCRAGIS L+R      SSIN      +DRL 
Sbjct: 1   MASLHCSSSVQNSLFVNSLSQKLRGRFICCRAGISFLVRAEQAHASSINGHACSSEDRLG 60

Query: 61  RRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVTDNKDGYSFVYPFGWQEVVIDGQDK 120
           RRQLL+GSAFITWISLADMNSMSFAAETKKGFLSV+D KDGYSFVYPFGWQEVVI GQDK
Sbjct: 61  RRQLLSGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIAGQDK 120

Query: 121 VFKDVIEPLESVSVNVIPTNKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVN 180
           VFKDVIEPLESVSVN+IPT KEDIRDFGPP+QVAETLIKKVLAPSNQKTKLIEASEHDV+
Sbjct: 121 VFKDVIEPLESVSVNLIPTGKEDIRDFGPPEQVAETLIKKVLAPSNQKTKLIEASEHDVD 180

Query: 181 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTTS 232
           GKAYYTFEFVAQAPNYTRHALSTIAV+NGKFYTLTTGANERRWEKMKDKLRTVV+SFT S
Sbjct: 181 GKAYYTFEFVAQAPNYTRHALSTIAVSNGKFYTLTTGANERRWEKMKDKLRTVVESFTIS 240

[Close]

BLAST of Sed0016692 vs. TAIR 10
Match: AT3G55330.1 (PsbP-like protein 1 )

HSP 1 Score: 282.3 bits (721), Expect = 3.4e-76
Identity = 138/209 (66.03%), Postives = 166/209 (79.43%), Query Frame = 0


Query: 19  GRVVCCRAGISLLLR-PHPPRQSSINPQDRLARRQLLAGSAFITWISLADMNSMSFAAET 78
           G +   + G+S L++  H    SS + QD+  RR ++       WISL     +SFAAE+
Sbjct: 18  GVIPSSKKGLSFLVKAEHHSSSSSSHLQDKCQRRLIVTFGVVAPWISLLSRAPLSFAAES 77

Query: 79  KKGFLSVTDNKDGYSFVYPFGWQEVVIDGQDKVFKDVIEPLESVSVNVIPTNKEDIRDFG 138
           KKGFL+V+DNKD Y+F+YPFGWQEVVI+GQDKV+KDVIEPLESVSVN++PT+K+ I++FG
Sbjct: 78  KKGFLAVSDNKDAYAFLYPFGWQEVVIEGQDKVYKDVIEPLESVSVNLVPTSKQTIKEFG 137

Query: 139 PPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYTFEFVAQAPNYTRHALSTIAVAN 198
           PP+Q+AETLIKKVLAP NQKT LI+ASEHDV+GK YY FEF  QA NYTRHAL TI V N
Sbjct: 138 PPKQIAETLIKKVLAPPNQKTTLIDASEHDVDGKTYYQFEFTVQARNYTRHALGTITVFN 197

Query: 199 GKFYTLTTGANERRWEKMKDKLRTVVDSF 227
           G FYTLTTGANERRWEKMKD+L TVVDSF
Sbjct: 198 GNFYTLTTGANERRWEKMKDRLHTVVDSF 226

[Close]

BLAST of Sed0016692 vs. TAIR 10
Match: AT2G39470.1 (PsbP-like protein 2 )

HSP 1 Score: 132.1 bits (331), Expect = 5.7e-31
Identity = 69/176 (39.20%), Postives = 97/176 (55.11%), Query Frame = 0


Query: 50  RRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVTDNKDGYSFVYPFGWQEVVIDGQDK 109
           RRQ L G    T ++ +   ++  A E  K +    D +DGYS+ YP  W+E      D 
Sbjct: 59  RRQALVGVG--TLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDS 118

Query: 110 VFKDVIEPLESVSVNVIPTNKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVN 169
            FKD    L++V V  IPT K DI + GP ++V   L+K   A  NQ   + +  E   +
Sbjct: 119 AFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVED 178

Query: 170 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDS 226
           GK YYTFE+  + P Y   + +T+AV N ++YTL  GANERRW K+K +L+ V DS
Sbjct: 179 GKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADS 232

[Close]

BLAST of Sed0016692 vs. TAIR 10
Match: AT2G39470.2 (PsbP-like protein 2 )

HSP 1 Score: 132.1 bits (331), Expect = 5.7e-31
Identity = 69/176 (39.20%), Postives = 97/176 (55.11%), Query Frame = 0


Query: 50  RRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVTDNKDGYSFVYPFGWQEVVIDGQDK 109
           RRQ L G    T ++ +   ++  A E  K +    D +DGYS+ YP  W+E      D 
Sbjct: 51  RRQALVGVG--TLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDS 110

Query: 110 VFKDVIEPLESVSVNVIPTNKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVN 169
            FKD    L++V V  IPT K DI + GP ++V   L+K   A  NQ   + +  E   +
Sbjct: 111 AFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVED 170

Query: 170 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDS 226
           GK YYTFE+  + P Y   + +T+AV N ++YTL  GANERRW K+K +L+ V DS
Sbjct: 171 GKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADS 224

[Close]

BLAST of Sed0016692 vs. TAIR 10
Match: AT2G39470.3 (PsbP-like protein 2 )

HSP 1 Score: 71.6 bits (174), Expect = 9.1e-13
Identity = 40/116 (34.48%), Postives = 57/116 (49.14%), Query Frame = 0


Query: 50  RRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVTDNKDGYSFVYPFGWQEVVIDGQDK 109
           RRQ L G    T ++ +   ++  A E  K +    D +DGYS+ YP  W+E      D 
Sbjct: 51  RRQALVGVG--TLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDS 110

Query: 110 VFKDVIEPLESVSVNVIPTNKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASE 166
            FKD    L++V V  IPT K DI + GP ++V   L+K   A  NQ   + +  E
Sbjct: 111 AFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKE 164

[Close]

BLAST of Sed0016692 vs. TAIR 10
Match: AT1G06680.1 (photosystem II subunit P-1 )

HSP 1 Score: 56.6 bits (135), Expect = 3.0e-08
Identity = 56/207 (27.05%), Postives = 86/207 (41.55%), Query Frame = 0


Query: 47  RLARRQLLAGSAFITWISLADM---NSMSFAAETKKGFLSVTDNKDGYSFVYPFGW---Q 106
           RLA   L+  +A  + +S AD     + +   + K     +  N DG+    P  W   +
Sbjct: 56  RLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSK 115

Query: 107 EVVIDGQDKVFKDVIEPLESVSVNVIPTNKEDIRDFGPPQ----QVAETLIKKVLAPSNQ 166
           E+   GQ   F+D  +   +++V V PT+K+ I D+G P+    QV   L K+       
Sbjct: 116 EIEYPGQVLRFEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETA 175

Query: 167 K-----------TKLIEASEHDVNGKAYYTFEFV---AQAPNYTRHALSTIAVANGKFYT 226
                         ++E+S  +V GK YY    +   A      +H L T  V  GK Y 
Sbjct: 176 SEGGFDNNAVATANILESSSQEVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYI 235

Query: 227 LTTGANERRWEKMKDKLRTVVDSFTTS 230
               A ++RW K     R  V+S  TS
Sbjct: 236 CKAQAGDKRWFK---GARKFVESAATS 259

The following BLAST results are available for this feature:

BLAST of Sed0016692 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463515.1	2.3e-111	88.56	PREDICTED: psbP-like protein 1, chloroplastic [Cucumis melo] >TYK05768.1 psbP-li...	[more]
XP_004149814.1	3.1e-111	88.14	psbP-like protein 1, chloroplastic [Cucumis sativus] >KGN51262.1 hypothetical pr...	[more]
XP_038890216.1	2.9e-109	88.03	psbP-like protein 1, chloroplastic isoform X2 [Benincasa hispida]	[more]
XP_023551143.1	3.5e-107	84.30	psbP-like protein 1, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_038890215.1	3.5e-107	84.36	psbP-like protein 1, chloroplastic isoform X1 [Benincasa hispida]	[more]

BLAST of Sed0016692 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P82538	4.8e-75	66.03	PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 ...	[more]
O80634	8.0e-30	39.20	Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis t...	[more]
Q40407	7.1e-10	28.10	Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus O...	[more]
Q04127	2.1e-09	25.86	Oxygen-evolving enhancer protein 2-3, chloroplastic OS=Nicotiana tabacum OX=4097...	[more]
P18212	7.8e-09	25.66	Oxygen-evolving enhancer protein 2-2, chloroplastic OS=Nicotiana tabacum OX=4097...	[more]

BLAST of Sed0016692 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C3H9	1.1e-111	88.56	PsbP-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G0...	[more]
A0A1S3CJG4	1.1e-111	88.56	psbP-like protein 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501654 PE=4 ...	[more]
A0A0A0KS54	1.5e-111	88.14	PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G505230 PE=4 S...	[more]
A0A6J1JSB4	8.4e-107	83.88	psbP-like protein 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1BYZ6	4.2e-106	83.88	psbP-like protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11100674...	[more]

BLAST of Sed0016692 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55330.1	3.4e-76	66.03	PsbP-like protein 1	[more]
AT2G39470.1	5.7e-31	39.20	PsbP-like protein 2	[more]
AT2G39470.2	5.7e-31	39.20	PsbP-like protein 2	[more]
AT2G39470.3	9.1e-13	34.48	PsbP-like protein 2	[more]
AT1G06680.1	3.0e-08	27.05	photosystem II subunit P-1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 80..227 e-value: 1.6E-50 score: 171.3
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 68..228 e-value: 9.9E-50 score: 170.9
None	No IPR available	PANTHER	PTHR31407:SF4	PSBP-LIKE PROTEIN 1, CHLOROPLASTIC	coord: 40..228
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 40..228
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 83..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016692.1	Sed0016692.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005509	calcium ion binding