Sed0016661 (gene) Chayote v1

Overview


Name	Sed0016661
Type	gene
Organism	Sechium edule (Chayote v1)
Description	TIP41-like protein
Location	LG03: 2477746 .. 2479409 (-)
RNA-Seq Expression	Sed0016661
Synteny	Sed0016661

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTCCCTTCCATTGTAGGGCCCCCTTCTCAGCTGTCCCTCTTTATTAAATCTCCCTAGGCCTCTTCATTTCCTCATCCATTTTCCTCTTCAGTACCCTTTCCTCCTCTCCCATGGCTGAACCCACCTGTTTGAGTTTCCCCACTGAGTTCCCATACGAGCTTGACTCGTTCGGGTCTATCTTGGGCCTCAACTCGCCGGTCGACTCGGTTGTTAGCTCTACGGACGACGATGGCTTCTTTCTAGGGCTGGCTCAGCAACTTTCATGGACTTCTCTCTGTGAATCTGAGAAATCAGTTTCTCCCTGTTTTAATCCCATCAAATTTGAGGTACCCTTTTGATGATTTGGTGTTTTCTTTAGTTTTTTAGGCGTTTTGATCATTTTCTTGACATGGGTTTTGTTCTGTGGGGTTGAAGAAGTGTTCTAGAACCGGATCTCCTCAATCGATTTTGAGTGGGTTCGACTTTGAATGTTCTAAATCGTCTTCCATGGCGGTTTTGGGGGCTGAGAATGATGCGAGGTTGAAGATGAGCGGTGATAAAATCCCTTATCACAACAATGATCTTCAAGTTCGGCCTACAATTTCGGTTAATTCTACTTGTAATTTGGATTATGGTCTATTTTCGAATCAGAATTGTGCAAGGAATCTGGCATTTAAGGTAAATGGTTTTGTTGAATCTCTTAGAACAGAGTATTTTTCCAATTGGGTTCTCTGTTTTTTATTCTTTTTTCTGAGATTTCGTGTTTCACAGATGCAGAAAGTGAGAGAAGATCTAGTGCTGCAGATTCTTTGTGCATCTTCTCGGCGAAGACAAGCTCCGCCGTACCGGAAGCCGGAGATTCATGTCGGTGCCCGAAGCGGCGGTGGCACCGGCGGCGCATCCCACTCTCCATTGCTTCCGCCGCCGCTAAATCAGCAGCCACACCCCAACTCCTCCGCCGTGCGTTGTATTCATCCCGGCGTAAAAAGGGCTTCCTCCGGCACCGGAGTTTTCTTGCCTCGCCGGCATTTAAACCCTTCTGATTGCCGCCAGAAACGAGGTACATTTTTTTTTGGTTAATCCATTAATTAACTCTCAATCACATGGGTTTCTTTCTAAAACCTCCATTGTTCTTACTAATCAGGAATTCCAGCCAACCGATTTGCAGAAGAGACTATAAGTCATAATCAAGCTCCACTAAATTATTGCCAATTACCTGGCTTCGGTAATCTAATTTCCCCCCTAATTTTCACTTAGTTCTTAATCCATTCTTGTTTTAAACGAGTTCTTTAACTAATTTCAGATTCCATTTCATCTCGAAGAACAAATCCTCTTCTGCCATATCCGAGGAGCTTGCGGGCAGATGTAAATCAAGAACTTCATCTACCTCAAGAATGGACATATTGATCTGGTTTGAAAACAAGTCATTAAAGTAGAATTAGCAGCATTTATTTGTGTAGATTTTAAGTAATTAGGAAGTTAATGAATGAAGATGTTTTGCTGTAGCAGCAGCTTCAAAATAAAGATATGGTGAAGGATAGTTTTGGGAAGTGGTTTGTTCTTGTAATAATCTGTAATTTTGTGCTATAGTGATTTGAATTTTTTTTTTTTTTTTTTTGGGCGAGGGCTAATTTATATATAAAAAGACCCTCTCTAGCTTGTAATTTTGTTTTAGGATTTAG

mRNA sequence

TTTCTCCCTTCCATTGTAGGGCCCCCTTCTCAGCTGTCCCTCTTTATTAAATCTCCCTAGGCCTCTTCATTTCCTCATCCATTTTCCTCTTCAGTACCCTTTCCTCCTCTCCCATGGCTGAACCCACCTGTTTGAGTTTCCCCACTGAGTTCCCATACGAGCTTGACTCGTTCGGGTCTATCTTGGGCCTCAACTCGCCGGTCGACTCGGTTGTTAGCTCTACGGACGACGATGGCTTCTTTCTAGGGCTGGCTCAGCAACTTTCATGGACTTCTCTCTGTGAATCTGAGAAATCAGTTTCTCCCTGTTTTAATCCCATCAAATTTGAGAAGTGTTCTAGAACCGGATCTCCTCAATCGATTTTGAGTGGGTTCGACTTTGAATGTTCTAAATCGTCTTCCATGGCGGTTTTGGGGGCTGAGAATGATGCGAGGTTGAAGATGAGCGGTGATAAAATCCCTTATCACAACAATGATCTTCAAGTTCGGCCTACAATTTCGGTTAATTCTACTTGTAATTTGGATTATGGTCTATTTTCGAATCAGAATTGTGCAAGGAATCTGGCATTTAAGGTAAATGGTTTTGTTGAATCTCTTAGAACAGAGTATTTTTCCAATTGGGTTCTCTGTTTTTTATTCTTTTTTCTGAGATTTCGTGTTTCACAGATGCAGAAAGTGAGAGAAGATCTAGTGCTGCAGATTCTTTGTGCATCTTCTCGGCGAAGACAAGCTCCGCCGTACCGGAAGCCGGAGATTCATGTCGGTGCCCGAAGCGGCGGTGGCACCGGCGGCGCATCCCACTCTCCATTGCTTCCGCCGCCGCTAAATCAGCAGCCACACCCCAACTCCTCCGCCGTGCGTTGTATTCATCCCGGCGTAAAAAGGGCTTCCTCCGGCACCGGAGTTTTCTTGCCTCGCCGGCATTTAAACCCTTCTGATTGCCGCCAGAAACGAGGAATTCCAGCCAACCGATTTGCAGAAGAGACTATAAGTCATAATCAAGCTCCACTAAATTATTGCCAATTACCTGGCTTCGATTCCATTTCATCTCGAAGAACAAATCCTCTTCTGCCATATCCGAGGAGCTTGCGGGCAGATGTAAATCAAGAACTTCATCTACCTCAAGAATGGACATATTGATCTGGTTTGAAAACAAGTCATTAAAGTAGAATTAGCAGCATTTATTTGTGTAGATTTTAAGTAATTAGGAAGTTAATGAATGAAGATGTTTTGCTGTAGCAGCAGCTTCAAAATAAAGATATGGTGAAGGATAGTTTTGGGAAGTGGTTTGTTCTTGTAATAATCTGTAATTTTGTGCTATAGTGATTTGAATTTTTTTTTTTTTTTTTTTGGGCGAGGGCTAATTTATATATAAAAAGACCCTCTCTAGCTTGTAATTTTGTTTTAGGATTTAG

Coding sequence (CDS)

ATGGCTGAACCCACCTGTTTGAGTTTCCCCACTGAGTTCCCATACGAGCTTGACTCGTTCGGGTCTATCTTGGGCCTCAACTCGCCGGTCGACTCGGTTGTTAGCTCTACGGACGACGATGGCTTCTTTCTAGGGCTGGCTCAGCAACTTTCATGGACTTCTCTCTGTGAATCTGAGAAATCAGTTTCTCCCTGTTTTAATCCCATCAAATTTGAGAAGTGTTCTAGAACCGGATCTCCTCAATCGATTTTGAGTGGGTTCGACTTTGAATGTTCTAAATCGTCTTCCATGGCGGTTTTGGGGGCTGAGAATGATGCGAGGTTGAAGATGAGCGGTGATAAAATCCCTTATCACAACAATGATCTTCAAGTTCGGCCTACAATTTCGGTTAATTCTACTTGTAATTTGGATTATGGTCTATTTTCGAATCAGAATTGTGCAAGGAATCTGGCATTTAAGGTAAATGGTTTTGTTGAATCTCTTAGAACAGAGTATTTTTCCAATTGGGTTCTCTGTTTTTTATTCTTTTTTCTGAGATTTCGTGTTTCACAGATGCAGAAAGTGAGAGAAGATCTAGTGCTGCAGATTCTTTGTGCATCTTCTCGGCGAAGACAAGCTCCGCCGTACCGGAAGCCGGAGATTCATGTCGGTGCCCGAAGCGGCGGTGGCACCGGCGGCGCATCCCACTCTCCATTGCTTCCGCCGCCGCTAAATCAGCAGCCACACCCCAACTCCTCCGCCGTGCGTTGTATTCATCCCGGCGTAAAAAGGGCTTCCTCCGGCACCGGAGTTTTCTTGCCTCGCCGGCATTTAAACCCTTCTGATTGCCGCCAGAAACGAGGAATTCCAGCCAACCGATTTGCAGAAGAGACTATAAGTCATAATCAAGCTCCACTAAATTATTGCCAATTACCTGGCTTCGATTCCATTTCATCTCGAAGAACAAATCCTCTTCTGCCATATCCGAGGAGCTTGCGGGCAGATGTAAATCAAGAACTTCATCTACCTCAAGAATGGACATATTGA

Protein sequence

MAEPTCLSFPTEFPYELDSFGSILGLNSPVDSVVSSTDDDGFFLGLAQQLSWTSLCESEKSVSPCFNPIKFEKCSRTGSPQSILSGFDFECSKSSSMAVLGAENDARLKMSGDKIPYHNNDLQVRPTISVNSTCNLDYGLFSNQNCARNLAFKVNGFVESLRTEYFSNWVLCFLFFFLRFRVSQMQKVREDLVLQILCASSRRRQAPPYRKPEIHVGARSGGGTGGASHSPLLPPPLNQQPHPNSSAVRCIHPGVKRASSGTGVFLPRRHLNPSDCRQKRGIPANRFAEETISHNQAPLNYCQLPGFDSISSRRTNPLLPYPRSLRADVNQELHLPQEWTY

Homology

[Close]

BLAST of Sed0016661 vs. NCBI nr
Match: XP_022134429.1 (uncharacterized protein LOC111006679 [Momordica charantia])

HSP 1 Score: 336.7 bits (862), Expect = 2.4e-88
Identity = 203/386 (52.59%), Postives = 237/386 (61.40%), Query Frame = 0


Query: 7   LSFPTEFPYELDSFGSILGLNSPVDSVVSST------DDDGFFLGLAQQLSWTSLCESEK 66
           LSFPT+FPYE DS  S   LNSPV+SVVSST      DDD FF+GLA+QL+WT LCE+E 
Sbjct: 19  LSFPTDFPYEFDSLASNFDLNSPVESVVSSTESTDSSDDDDFFVGLARQLAWTYLCETES 78

Query: 67  SVSPCFNPIKFE-KCSRTGSPQSILSGFD--------FECSKSSSMAVLGAEND------ 126
           S +PCFNP KFE K  + GSPQS LSG D            KS  +AV GAEND      
Sbjct: 79  SPTPCFNPNKFEKKYVKAGSPQSTLSGIDAWFRPHSPSSQLKSPPIAVFGAENDARVLVH 138

Query: 127 ------ARLKMSGDKIPYHNND------LQVRPTISVNSTCNLDYGLFSNQNCARNLAFK 186
                 ARLKMS +  P+ +ND      +  R +I V ST N+DYGLFSN+ CARNLAF 
Sbjct: 139 AAAREAARLKMSAETTPFQSNDPFVRGFMGARSSIPVKSTSNVDYGLFSNEGCARNLAFS 198

Query: 187 VNGFVESLRTEYFSNWVLCFLFFFLRFRVSQMQKVREDLVLQILCASSRRRQ------AP 246
                                        +Q+Q+VR DLVLQ +CASS  RQ      AP
Sbjct: 199 -----------------------------AQVQQVRHDLVLQAICASSWGRQAKVDWAAP 258

Query: 247 PYRKPEI-----HVGARSG--GGTGGASHSPLLPPPLNQQPHPNSSAVRCIHPG---VKR 306
           P+RKPEI     ++G   G   G  G   S  LPPP +Q P PN+SAVRCIHPG   VKR
Sbjct: 259 PHRKPEIQNRERNIGLGGGRCSGAAGLYQSAWLPPPQSQPPPPNASAVRCIHPGGPAVKR 318

Query: 307 ASSGTGVFLPRRHLNPSDCRQKRGIPANRFAEETISHNQAPLNYCQLPGFDSISSRRTNP 342
           ASSGTGVFLPRR++NPS+CRQK+G PA RF EE I+  QAP N C  PGFD++ +RR   
Sbjct: 319 ASSGTGVFLPRRYVNPSECRQKQGTPAVRFPEEMINPIQAPFNGCLSPGFDAMLARRNTS 375

[Close]

BLAST of Sed0016661 vs. NCBI nr
Match: XP_038884389.1 (uncharacterized protein LOC120075245 isoform X2 [Benincasa hispida])

HSP 1 Score: 334.7 bits (857), Expect = 9.2e-88
Identity = 209/396 (52.78%), Postives = 241/396 (60.86%), Query Frame = 0


Query: 1   MAEPTCLSFPTEFPYELDSFGSILGLNSPVDSVVSS---------TDDDGFFLGLAQQLS 60
           MA P+ LSFPTEFPY+ DSF S   LNSPV+SV SS         +DDD FF+GLAQQL+
Sbjct: 1   MATPS-LSFPTEFPYDFDSFFSNSDLNSPVESVGSSVTDSTDSSGSDDDDFFVGLAQQLA 60

Query: 61  WTSLCESEKSVSPCFNPIKFEKCSRTGSPQSILSGFD--FECSKSSS------MAVLGAE 120
           WTSLCE+EKS SP FNP  FE   + GSPQS L+G D  F     SS      MAV GAE
Sbjct: 61  WTSLCETEKSTSPSFNPKNFEMYVKAGSPQSTLTGIDTWFRPESPSSQLQSPPMAVFGAE 120

Query: 121 ND------------ARLKMSGDKIPYHNND------LQVRPTISVNSTCNLDYGLFSNQN 180
           ND            ARLKMSG+  P+ NND      +  R +I V ST N+DYG+FSNQN
Sbjct: 121 NDARALLHAAAREAARLKMSGETTPFRNNDPFMREYVGARSSIPVKSTNNVDYGVFSNQN 180

Query: 181 CARNLAFKVNGFVESLRTEYFSNWVLCFLFFFLRFRVSQMQKVREDLVLQILCASS---R 240
           CARNLAF                              +QMQ+V++DLVLQ L ASS   R
Sbjct: 181 CARNLAF-----------------------------AAQMQQVKQDLVLQALRASSWGGR 240

Query: 241 RRQ----APPYRKPEI--------HVGARSGGGTGGASHSPLLPPPLNQQPHPNSSAVRC 300
           + +    A P+ K EI        +   R GG TGG  HSP LPPP NQQP  N S +RC
Sbjct: 241 QAKVSWSAQPHWKAEIQSRERNVLNASGRCGGNTGGLYHSPWLPPPQNQQPPSNPSVMRC 300

Query: 301 IHP---GVKRASSGTGVFLPRRHLNPSDCRQKRGIPANRFAEETISHNQAPLNYCQLPGF 342
           IHP   GVKRASSGTGVFLPRR+++PS+CRQK+G PA RFAEE  S  QAPLN    P  
Sbjct: 301 IHPGRSGVKRASSGTGVFLPRRYISPSECRQKQGSPAVRFAEEMKSPIQAPLNGWLSPSI 360

[Close]

BLAST of Sed0016661 vs. NCBI nr
Match: XP_023515357.1 (uncharacterized protein LOC111779387 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 333.2 bits (853), Expect = 2.7e-87
Identity = 204/388 (52.58%), Postives = 230/388 (59.28%), Query Frame = 0


Query: 3   EPTCLSFPTEFPYELDSFGSILGLNSPVDSVVSST-------DDDGFFLGLAQQLSWTSL 62
           EP CLSFP+EFPYE DSFGS   LNSPV+SVVSST       DDD FF+GLAQQ +WTSL
Sbjct: 26  EPPCLSFPSEFPYEFDSFGSNSDLNSPVESVVSSTDSTGGSSDDDEFFVGLAQQFAWTSL 85

Query: 63  CESEKSVSPCFNPIKFEKCS-RTGSPQSILSGFD--------FECSKSSSMAVLGAEND- 122
           CE+EKS  PCFNP K EK   + GSPQS LSG D            KS  MAV GA+ND 
Sbjct: 86  CETEKSTFPCFNPNKIEKKHVKAGSPQSTLSGIDAWFRPEGPSSLLKSPPMAVFGADNDA 145

Query: 123 -----------ARLKMSGDKIPYHNND-LQVRPTISVNSTCNLDYGLFSNQNCARNLAFK 182
                      ARLKM G   PYHNN  +  R +I V ST N++YGLFS QNCARNLAF 
Sbjct: 146 RVLIHAASREAARLKMYGQTTPYHNNGFMGARSSIPVKSTSNVEYGLFSTQNCARNLAFS 205

Query: 183 VNGFVESLRTEYFSNWVLCFLFFFLRFRVSQMQKVREDLVLQILCASSRRRQ------AP 242
                                        +Q+QKV +DLVLQ L AS+  RQ      A 
Sbjct: 206 -----------------------------AQVQKVGQDLVLQALRASAWERQAKVGWSAQ 265

Query: 243 PYRKPEIH--------VGARSGGGTGGASHSPLLPPPLNQQPHPNSSAVRCIHP----GV 302
           P+RKPEI         V +R  GGTG   HS  +PP  NQ P PN+SA+RCIHP     +
Sbjct: 266 PHRKPEIQNRERNIVDVTSRCSGGTGSLYHSAWIPPHQNQHPPPNASAMRCIHPAGGSAI 325

Query: 303 KRASSGTGVFLPRRHLNPSDCRQKRGIPANRFAEETISHNQAPLNYCQLPGFDSISSRRT 342
           KRASSGTGVFLPRRH+NPSDCR K+G PA  F EE  S  QAP N      FDS    R 
Sbjct: 326 KRASSGTGVFLPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSFDS----RK 380

[Close]

BLAST of Sed0016661 vs. NCBI nr
Match: XP_038884388.1 (uncharacterized protein LOC120075245 isoform X1 [Benincasa hispida])

HSP 1 Score: 332.8 bits (852), Expect = 3.5e-87
Identity = 210/397 (52.90%), Postives = 242/397 (60.96%), Query Frame = 0


Query: 1   MAEPTCLSFPTEFPYELDSFGSILGLNSPVDSVVSS---------TDDDGFFLGLAQQLS 60
           MA P+ LSFPTEFPY+ DSF S   LNSPV+SV SS         +DDD FF+GLAQQL+
Sbjct: 1   MATPS-LSFPTEFPYDFDSFFSNSDLNSPVESVGSSVTDSTDSSGSDDDDFFVGLAQQLA 60

Query: 61  WTSLCESEKSVSPCFNPIKFEKC-SRTGSPQSILSGFD--FECSKSSS------MAVLGA 120
           WTSLCE+EKS SP FNP  FEK   + GSPQS L+G D  F     SS      MAV GA
Sbjct: 61  WTSLCETEKSTSPSFNPKNFEKMYVKAGSPQSTLTGIDTWFRPESPSSQLQSPPMAVFGA 120

Query: 121 END------------ARLKMSGDKIPYHNND------LQVRPTISVNSTCNLDYGLFSNQ 180
           END            ARLKMSG+  P+ NND      +  R +I V ST N+DYG+FSNQ
Sbjct: 121 ENDARALLHAAAREAARLKMSGETTPFRNNDPFMREYVGARSSIPVKSTNNVDYGVFSNQ 180

Query: 181 NCARNLAFKVNGFVESLRTEYFSNWVLCFLFFFLRFRVSQMQKVREDLVLQILCASS--- 240
           NCARNLAF                              +QMQ+V++DLVLQ L ASS   
Sbjct: 181 NCARNLAF-----------------------------AAQMQQVKQDLVLQALRASSWGG 240

Query: 241 RRRQ----APPYRKPEI--------HVGARSGGGTGGASHSPLLPPPLNQQPHPNSSAVR 300
           R+ +    A P+ K EI        +   R GG TGG  HSP LPPP NQQP  N S +R
Sbjct: 241 RQAKVSWSAQPHWKAEIQSRERNVLNASGRCGGNTGGLYHSPWLPPPQNQQPPSNPSVMR 300

Query: 301 CIHP---GVKRASSGTGVFLPRRHLNPSDCRQKRGIPANRFAEETISHNQAPLNYCQLPG 342
           CIHP   GVKRASSGTGVFLPRR+++PS+CRQK+G PA RFAEE  S  QAPLN    P 
Sbjct: 301 CIHPGRSGVKRASSGTGVFLPRRYISPSECRQKQGSPAVRFAEEMKSPIQAPLNGWLSPS 360

[Close]

BLAST of Sed0016661 vs. NCBI nr
Match: XP_022957513.1 (uncharacterized protein LOC111458886 [Cucurbita moschata])

HSP 1 Score: 332.0 bits (850), Expect = 5.9e-87
Identity = 204/388 (52.58%), Postives = 231/388 (59.54%), Query Frame = 0


Query: 3   EPTCLSFPTEFPYELDSFGSILGLNSPVDSVVSST-------DDDGFFLGLAQQLSWTSL 62
           EP CLSFP+EFPYE DSFGS   LNSPV+S VSST       DDD FF+GLAQQ +WTSL
Sbjct: 26  EPPCLSFPSEFPYEFDSFGSNSDLNSPVESAVSSTDSTGGSSDDDEFFVGLAQQFAWTSL 85

Query: 63  CESEKSVSPCFNPIKFE-KCSRTGSPQSILSGFD--------FECSKSSSMAVLGAEND- 122
           CE+EKS  PCFNP K E K  + GSPQS LSG D            KS  MAV GA+ND 
Sbjct: 86  CETEKSTFPCFNPNKIEKKYVKAGSPQSTLSGIDAWFRPEGPSSQLKSPPMAVFGADNDA 145

Query: 123 -----------ARLKMSGDKIPYHNND-LQVRPTISVNSTCNLDYGLFSNQNCARNLAFK 182
                      ARLKM G   PYHNN  +  R +I V ST N++YGLFS QNCARNLAF 
Sbjct: 146 RVLIHAASREAARLKMYGQTTPYHNNGFVGARSSIPVKSTSNVEYGLFSTQNCARNLAFS 205

Query: 183 VNGFVESLRTEYFSNWVLCFLFFFLRFRVSQMQKVREDLVLQILCASSRRRQ------AP 242
                                        +Q+QKV +DLVLQ L AS+  RQ      A 
Sbjct: 206 -----------------------------AQVQKVGQDLVLQALRASAWERQAKVGWLAQ 265

Query: 243 PYRKPEI--------HVGARSGGGTGGASHSPLLPPPLNQQPHPNSSAVRCIHP----GV 302
           P+RKP+I        +V +R  GGTG   HSP +PP  NQ P PN+SA+RCI P     +
Sbjct: 266 PHRKPDIQSRERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAI 325

Query: 303 KRASSGTGVFLPRRHLNPSDCRQKRGIPANRFAEETISHNQAPLNYCQLPGFDSISSRRT 342
           KRASSGTGVFLPRRH+NPSDCR K+G PA  F EE  S  QAP N      FDS    R 
Sbjct: 326 KRASSGTGVFLPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNAWLSSSFDS----RK 380

[Close]

BLAST of Sed0016661 vs. ExPASy TrEMBL
Match: A0A6J1BYQ6 (uncharacterized protein LOC111006679 OS=Momordica charantia OX=3673 GN=LOC111006679 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 1.2e-88
Identity = 203/386 (52.59%), Postives = 237/386 (61.40%), Query Frame = 0


Query: 7   LSFPTEFPYELDSFGSILGLNSPVDSVVSST------DDDGFFLGLAQQLSWTSLCESEK 66
           LSFPT+FPYE DS  S   LNSPV+SVVSST      DDD FF+GLA+QL+WT LCE+E 
Sbjct: 19  LSFPTDFPYEFDSLASNFDLNSPVESVVSSTESTDSSDDDDFFVGLARQLAWTYLCETES 78

Query: 67  SVSPCFNPIKFE-KCSRTGSPQSILSGFD--------FECSKSSSMAVLGAEND------ 126
           S +PCFNP KFE K  + GSPQS LSG D            KS  +AV GAEND      
Sbjct: 79  SPTPCFNPNKFEKKYVKAGSPQSTLSGIDAWFRPHSPSSQLKSPPIAVFGAENDARVLVH 138

Query: 127 ------ARLKMSGDKIPYHNND------LQVRPTISVNSTCNLDYGLFSNQNCARNLAFK 186
                 ARLKMS +  P+ +ND      +  R +I V ST N+DYGLFSN+ CARNLAF 
Sbjct: 139 AAAREAARLKMSAETTPFQSNDPFVRGFMGARSSIPVKSTSNVDYGLFSNEGCARNLAFS 198

Query: 187 VNGFVESLRTEYFSNWVLCFLFFFLRFRVSQMQKVREDLVLQILCASSRRRQ------AP 246
                                        +Q+Q+VR DLVLQ +CASS  RQ      AP
Sbjct: 199 -----------------------------AQVQQVRHDLVLQAICASSWGRQAKVDWAAP 258

Query: 247 PYRKPEI-----HVGARSG--GGTGGASHSPLLPPPLNQQPHPNSSAVRCIHPG---VKR 306
           P+RKPEI     ++G   G   G  G   S  LPPP +Q P PN+SAVRCIHPG   VKR
Sbjct: 259 PHRKPEIQNRERNIGLGGGRCSGAAGLYQSAWLPPPQSQPPPPNASAVRCIHPGGPAVKR 318

Query: 307 ASSGTGVFLPRRHLNPSDCRQKRGIPANRFAEETISHNQAPLNYCQLPGFDSISSRRTNP 342
           ASSGTGVFLPRR++NPS+CRQK+G PA RF EE I+  QAP N C  PGFD++ +RR   
Sbjct: 319 ASSGTGVFLPRRYVNPSECRQKQGTPAVRFPEEMINPIQAPFNGCLSPGFDAMLARRNTS 375

[Close]

BLAST of Sed0016661 vs. ExPASy TrEMBL
Match: A0A6J1H0F4 (uncharacterized protein LOC111458886 OS=Cucurbita moschata OX=3662 GN=LOC111458886 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 2.9e-87
Identity = 204/388 (52.58%), Postives = 231/388 (59.54%), Query Frame = 0


Query: 3   EPTCLSFPTEFPYELDSFGSILGLNSPVDSVVSST-------DDDGFFLGLAQQLSWTSL 62
           EP CLSFP+EFPYE DSFGS   LNSPV+S VSST       DDD FF+GLAQQ +WTSL
Sbjct: 26  EPPCLSFPSEFPYEFDSFGSNSDLNSPVESAVSSTDSTGGSSDDDEFFVGLAQQFAWTSL 85

Query: 63  CESEKSVSPCFNPIKFE-KCSRTGSPQSILSGFD--------FECSKSSSMAVLGAEND- 122
           CE+EKS  PCFNP K E K  + GSPQS LSG D            KS  MAV GA+ND 
Sbjct: 86  CETEKSTFPCFNPNKIEKKYVKAGSPQSTLSGIDAWFRPEGPSSQLKSPPMAVFGADNDA 145

Query: 123 -----------ARLKMSGDKIPYHNND-LQVRPTISVNSTCNLDYGLFSNQNCARNLAFK 182
                      ARLKM G   PYHNN  +  R +I V ST N++YGLFS QNCARNLAF 
Sbjct: 146 RVLIHAASREAARLKMYGQTTPYHNNGFVGARSSIPVKSTSNVEYGLFSTQNCARNLAFS 205

Query: 183 VNGFVESLRTEYFSNWVLCFLFFFLRFRVSQMQKVREDLVLQILCASSRRRQ------AP 242
                                        +Q+QKV +DLVLQ L AS+  RQ      A 
Sbjct: 206 -----------------------------AQVQKVGQDLVLQALRASAWERQAKVGWLAQ 265

Query: 243 PYRKPEI--------HVGARSGGGTGGASHSPLLPPPLNQQPHPNSSAVRCIHP----GV 302
           P+RKP+I        +V +R  GGTG   HSP +PP  NQ P PN+SA+RCI P     +
Sbjct: 266 PHRKPDIQSRERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAI 325

Query: 303 KRASSGTGVFLPRRHLNPSDCRQKRGIPANRFAEETISHNQAPLNYCQLPGFDSISSRRT 342
           KRASSGTGVFLPRRH+NPSDCR K+G PA  F EE  S  QAP N      FDS    R 
Sbjct: 326 KRASSGTGVFLPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNAWLSSSFDS----RK 380

[Close]

BLAST of Sed0016661 vs. ExPASy TrEMBL
Match: A0A6J1JS02 (uncharacterized protein LOC111487028 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487028 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 4.9e-87
Identity = 204/389 (52.44%), Postives = 233/389 (59.90%), Query Frame = 0


Query: 3   EPTCLSFPTEFPYELDSFGSILGLNSPVDSVVSST-------DDDGFFLGLAQQLSWTSL 62
           EP CLSFP+EFPYE DSFGS   LNSPV+SVVSST       DDD FF+GLAQQ +WTSL
Sbjct: 26  EPPCLSFPSEFPYEFDSFGSNSDLNSPVESVVSSTDSTGGSSDDDEFFVGLAQQFAWTSL 85

Query: 63  CESEKSVSPCFNPIKFEKCSRTGSPQSILSGFD--------FECSKSSSMAVLGAEND-- 122
           CE+EKS  PCFNP K +K  +TGSPQS LS  D            KS  M V GA+ND  
Sbjct: 86  CETEKSTFPCFNPNKIQKYVKTGSPQSTLSRIDAWFRPEGPSSQLKSPPMVVFGADNDAR 145

Query: 123 ----------ARLKMSGDKIPYHNNDLQ-VRPTISVNSTCNLDYGLFSNQNCARNLAFKV 182
                     ARLKM G   PYHNN     R +I V ST N++YGLFS QNCARNLAF  
Sbjct: 146 VLIHAASREAARLKMYGQTTPYHNNGFAGARSSIPVKSTSNVEYGLFSTQNCARNLAFS- 205

Query: 183 NGFVESLRTEYFSNWVLCFLFFFLRFRVSQMQKVREDLVLQILCASSRRRQ------APP 242
                                       +Q+QKV +DLVLQ L AS+  RQ      A P
Sbjct: 206 ----------------------------AQVQKVGQDLVLQALRASAWERQAKVGWSAQP 265

Query: 243 YRKPEI--------HVGARSGGGTGGASHSPLLPPP-LNQQPHPNSSAVRCIHP----GV 302
           +RK EI        +V +RSGGGTG  +H P +PPP  +Q P PN+SA+RCIHP     +
Sbjct: 266 HRKSEIQNRERNIVNVTSRSGGGTGSLNHCPWIPPPHQSQHPPPNASAMRCIHPAGGSAI 325

Query: 303 KRASSGTGVFLPRRHLNPSDCRQKRGIPANRFAEETISHNQAPLNYCQLPGFDSISSRRT 342
           KRASSGTGVFLPRRH+NPS+CR K+G PA  F EE  S NQAP N       DS    R 
Sbjct: 326 KRASSGTGVFLPRRHVNPSECRHKQGSPAINFTEEMKSSNQAPFNGWLSSSVDS----RK 381

[Close]

BLAST of Sed0016661 vs. ExPASy TrEMBL
Match: A0A6J1JLQ9 (uncharacterized protein LOC111487028 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487028 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 1.2e-85
Identity = 204/390 (52.31%), Postives = 233/390 (59.74%), Query Frame = 0


Query: 3   EPTCLSFPTEFPYELDSFGSILGLNSPVDSVVSST-------DDDGFFLGLAQQLSWTSL 62
           EP CLSFP+EFPYE DSFGS   LNSPV+SVVSST       DDD FF+GLAQQ +WTSL
Sbjct: 26  EPPCLSFPSEFPYEFDSFGSNSDLNSPVESVVSSTDSTGGSSDDDEFFVGLAQQFAWTSL 85

Query: 63  CESEKSVSPCFNPIKFE-KCSRTGSPQSILSGFD--------FECSKSSSMAVLGAEND- 122
           CE+EKS  PCFNP K + K  +TGSPQS LS  D            KS  M V GA+ND 
Sbjct: 86  CETEKSTFPCFNPNKIQKKYVKTGSPQSTLSRIDAWFRPEGPSSQLKSPPMVVFGADNDA 145

Query: 123 -----------ARLKMSGDKIPYHNNDLQ-VRPTISVNSTCNLDYGLFSNQNCARNLAFK 182
                      ARLKM G   PYHNN     R +I V ST N++YGLFS QNCARNLAF 
Sbjct: 146 RVLIHAASREAARLKMYGQTTPYHNNGFAGARSSIPVKSTSNVEYGLFSTQNCARNLAFS 205

Query: 183 VNGFVESLRTEYFSNWVLCFLFFFLRFRVSQMQKVREDLVLQILCASSRRRQ------AP 242
                                        +Q+QKV +DLVLQ L AS+  RQ      A 
Sbjct: 206 -----------------------------AQVQKVGQDLVLQALRASAWERQAKVGWSAQ 265

Query: 243 PYRKPEI--------HVGARSGGGTGGASHSPLLPPP-LNQQPHPNSSAVRCIHP----G 302
           P+RK EI        +V +RSGGGTG  +H P +PPP  +Q P PN+SA+RCIHP     
Sbjct: 266 PHRKSEIQNRERNIVNVTSRSGGGTGSLNHCPWIPPPHQSQHPPPNASAMRCIHPAGGSA 325

Query: 303 VKRASSGTGVFLPRRHLNPSDCRQKRGIPANRFAEETISHNQAPLNYCQLPGFDSISSRR 342
           +KRASSGTGVFLPRRH+NPS+CR K+G PA  F EE  S NQAP N       DS    R
Sbjct: 326 IKRASSGTGVFLPRRHVNPSECRHKQGSPAINFTEEMKSSNQAPFNGWLSSSVDS----R 382

[Close]

BLAST of Sed0016661 vs. ExPASy TrEMBL
Match: A0A0A0KA94 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009380 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 9.0e-81
Identity = 201/397 (50.63%), Postives = 233/397 (58.69%), Query Frame = 0


Query: 1   MAEPTCLSFPTEFPYELDSFGSILGLNSPVDSVVSST---------DDDGFFLGLAQQLS 60
           MA PT L+FPTEFPY+ DSF S   LNSPV+SV SST         DDD FF+GLAQ+L+
Sbjct: 1   MAAPT-LTFPTEFPYDFDSFLSNCDLNSPVESVGSSTTDSTDSCGSDDDEFFVGLAQKLA 60

Query: 61  WTSLCESEKSVSPCFNPIKFEKCSRTGSPQSILSGFD--------FECSKSSSMAVLGAE 120
           WTSLCE+E +          +K  + GSPQS LSG D            KS  MAV GAE
Sbjct: 61  WTSLCEAENTFE--------KKYVKAGSPQSTLSGIDTWFRPESPSSQLKSPPMAVFGAE 120

Query: 121 NDAR------------LKMSGDKIPYHNND------LQVRPTISVNSTCNLDYGLFSNQN 180
           NDAR            LKMSG+  P+ NND      +  R ++ V ST N+DYG+FS QN
Sbjct: 121 NDARAILHAAAREAAKLKMSGETTPFQNNDPFMRGFVGARSSVPVKSTNNVDYGVFSTQN 180

Query: 181 CARNLAFKVNGFVESLRTEYFSNWVLCFLFFFLRFRVSQMQKVREDLVLQILCASS-RRR 240
            ARNLAF                              +Q+Q+V++DLVLQ L ASS R R
Sbjct: 181 SARNLAF-----------------------------AAQVQQVKQDLVLQALRASSLRER 240

Query: 241 Q------APPYRKPEI--------HVGARSGGGTGGASHSPLLPPPLNQQPHPNSSAVRC 300
           Q      A P+ K EI        +   R GGGTGG  HSP LPP  NQQP  N + VRC
Sbjct: 241 QAKASWSAQPHWKQEIQNRERNVVNASGRCGGGTGGLYHSPWLPPLQNQQPTSNPTVVRC 300

Query: 301 IHP---GVKRASSGTGVFLPRRHLNPSDCRQKRGIPANRFAEETISHNQAPLNYCQLPGF 342
           IHP   GVKRASSGTGVFLPRR++NPS+CRQK+GIP+ RF EE  S  QAPLN C  PGF
Sbjct: 301 IHPVRSGVKRASSGTGVFLPRRYINPSECRQKQGIPSVRFVEEMKSPIQAPLNGCHSPGF 359

[Close]

BLAST of Sed0016661 vs. TAIR 10
Match: AT2G39870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55690.1); Has 73 Blast hits to 71 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 2.5e-06
Identity = 37/101 (36.63%), Postives = 50/101 (49.50%), Query Frame = 0


Query: 4   PTCLSFPTEFPYELDSFGSILGLNSPVDSV----VSSTDDDGFFLGLAQQLSWTSLCESE 63
           PT L FP EFPYE DS     G  SP DS      SS D++ F  GL ++L+      ++
Sbjct: 26  PTRLGFPNEFPYEFDSPSFSPGFTSPGDSTETEDESSDDEEDFLAGLTRRLA----PSTQ 85

Query: 64  KSVSPCFNPIKFEKCSRTGSPQSILSGFDFECSKSSSMAVL 101
           +  SP F   +  + + T SPQS LSG     +  S   +L
Sbjct: 86  RLPSPLFKSEEKRQVAAT-SPQSTLSGLGSFSNSGSRSPIL 121

The following BLAST results are available for this feature:

BLAST of Sed0016661 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134429.1	2.4e-88	52.59	uncharacterized protein LOC111006679 [Momordica charantia]	[more]
XP_038884389.1	9.2e-88	52.78	uncharacterized protein LOC120075245 isoform X2 [Benincasa hispida]	[more]
XP_023515357.1	2.7e-87	52.58	uncharacterized protein LOC111779387 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_038884388.1	3.5e-87	52.90	uncharacterized protein LOC120075245 isoform X1 [Benincasa hispida]	[more]
XP_022957513.1	5.9e-87	52.58	uncharacterized protein LOC111458886 [Cucurbita moschata]	[more]

BLAST of Sed0016661 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0016661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYQ6	1.2e-88	52.59	uncharacterized protein LOC111006679 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1H0F4	2.9e-87	52.58	uncharacterized protein LOC111458886 OS=Cucurbita moschata OX=3662 GN=LOC1114588...	[more]
A0A6J1JS02	4.9e-87	52.44	uncharacterized protein LOC111487028 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JLQ9	1.2e-85	52.31	uncharacterized protein LOC111487028 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0KA94	9.0e-81	50.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009380 PE=4 SV=1	[more]

BLAST of Sed0016661 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39870.1	2.5e-06	36.63	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..215
None	No IPR available	PANTHER	PTHR33356	TIP41-LIKE PROTEIN	coord: 6..310
None	No IPR available	PANTHER	PTHR33356:SF17	H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1-LIKE	coord: 6..310

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016661.1	Sed0016661.1	mRNA
Sed0016661.2	Sed0016661.2	mRNA
Sed0016661.3	Sed0016661.3	mRNA