Sed0016632 (gene) Chayote v1

Overview


Name	Sed0016632
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Helicase C-terminal domain-containing protein
Location	LG04: 34330358 .. 34331065 (-)
RNA-Seq Expression	Sed0016632
Synteny	Sed0016632

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGCATCAAGATGGTGCTTGCTTCCCACATGACCCCTTGTCTCCTTATATAATTACCCCTCTTCTCCGCCTTATTTTCTCCACAATTCTTCATTCATTCCCCAATAATTAAAATCCCTCTTTTTTCTCTCTCTCTATATCTCATGGCCGACTCACAGCGGCGATCCTCCGGCACCGGCGCCGCTCAACGGCGGCAACAGCAGCAGCCGAGCCGCCTCCAGCGCCGTGCTCCGGCCACCCTCCAAATCAACCGCTCCAGCGCCGACTGGAACGTCGCCATCCCTCTCTTATCCCCACTCGTCTCTCCCTCCTCGCCGACCCCCACTCACGACTCAGCACCCACTTCCGCCTCTTCTCAGCCGGAGAAGCCGCCGGTTTTTAAGAAATGGCAGCACCCGGCGGCGCCTTTCCATTACGACTCCGCTTCTAGGGCTCCCAGATTCGTGCCCGTTTAGATTTTCCTTTTCTTTTCTTTTATTTAATAAACTCCACTTCATTGGTTCAACCATTTGTAATCTCTAGATCTAACGGTCTGTTTTTCGCCAGCTTTTCGATTGCATCTTCTGCTTAACCACACTTGATTATTTGTACACATCATTCCACTTTTTTTCTTTCCTTTCTTTTTTACCTGCCTCTCCTTATCTTACCTACTTCTGACTACTTGTCTTATACATACCTCCTAATATAATGAAAGAATAATAATGGGTC

mRNA sequence

GGAGCATCAAGATGGTGCTTGCTTCCCACATGACCCCTTGTCTCCTTATATAATTACCCCTCTTCTCCGCCTTATTTTCTCCACAATTCTTCATTCATTCCCCAATAATTAAAATCCCTCTTTTTTCTCTCTCTCTATATCTCATGGCCGACTCACAGCGGCGATCCTCCGGCACCGGCGCCGCTCAACGGCGGCAACAGCAGCAGCCGAGCCGCCTCCAGCGCCGTGCTCCGGCCACCCTCCAAATCAACCGCTCCAGCGCCGACTGGAACGTCGCCATCCCTCTCTTATCCCCACTCGTCTCTCCCTCCTCGCCGACCCCCACTCACGACTCAGCACCCACTTCCGCCTCTTCTCAGCCGGAGAAGCCGCCGGTTTTTAAGAAATGGCAGCACCCGGCGGCGCCTTTCCATTACGACTCCGCTTCTAGGGCTCCCAGATTCGTGCCCGTTTAGATTTTCCTTTTCTTTTCTTTTATTTAATAAACTCCACTTCATTGGTTCAACCATTTGTAATCTCTAGATCTAACGGTCTGTTTTTCGCCAGCTTTTCGATTGCATCTTCTGCTTAACCACACTTGATTATTTGTACACATCATTCCACTTTTTTTCTTTCCTTTCTTTTTTACCTGCCTCTCCTTATCTTACCTACTTCTGACTACTTGTCTTATACATACCTCCTAATATAATGAAAGAATAATAATGGGTC

Coding sequence (CDS)

ATGGCCGACTCACAGCGGCGATCCTCCGGCACCGGCGCCGCTCAACGGCGGCAACAGCAGCAGCCGAGCCGCCTCCAGCGCCGTGCTCCGGCCACCCTCCAAATCAACCGCTCCAGCGCCGACTGGAACGTCGCCATCCCTCTCTTATCCCCACTCGTCTCTCCCTCCTCGCCGACCCCCACTCACGACTCAGCACCCACTTCCGCCTCTTCTCAGCCGGAGAAGCCGCCGGTTTTTAAGAAATGGCAGCACCCGGCGGCGCCTTTCCATTACGACTCCGCTTCTAGGGCTCCCAGATTCGTGCCCGTTTAG

Protein sequence

MADSQRRSSGTGAAQRRQQQQPSRLQRRAPATLQINRSSADWNVAIPLLSPLVSPSSPTPTHDSAPTSASSQPEKPPVFKKWQHPAAPFHYDSASRAPRFVPV

Homology

[Close]

BLAST of Sed0016632 vs. NCBI nr
Match: XP_022138670.1 (uncharacterized protein At4g14450, chloroplastic-like [Momordica charantia])

HSP 1 Score: 131.3 bits (329), Expect = 4.7e-27
Identity = 79/108 (73.15%), Postives = 86/108 (79.63%), Query Frame = 0


Query: 1   MADSQRRSSGTGAAQRRQQQQPSRLQRRAPATLQINRSSADWNVAIPLLSPLVSPSSPTP 60
           MAD+QRR+SG G+   R+QQQPSRLQRRAPA+LQI+RS  DW VAIPLLSPLVSPSSPT 
Sbjct: 1   MADTQRRTSGAGS---RRQQQPSRLQRRAPASLQISRS--DWKVAIPLLSPLVSPSSPTE 60

Query: 61  THDSAPTSASSQ---PEKP--PVFKKWQHPAAPFHYDSASRAPRFVPV 104
             +S   S SSQ   PEKP  PV KKWQHPAAPFHYDS  RAPRFVPV
Sbjct: 61  IQNSREPSTSSQGSDPEKPPVPVTKKWQHPAAPFHYDSGPRAPRFVPV 103

[Close]

BLAST of Sed0016632 vs. NCBI nr
Match: XP_038875425.1 (uncharacterized protein At4g14450, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 129.0 bits (323), Expect = 2.3e-26
Identity = 80/116 (68.97%), Postives = 85/116 (73.28%), Query Frame = 0


Query: 1   MADSQRRSSGTGAAQRRQQQQPSRLQRRAPATLQINRSSADWNVAIPLLSPLVSPSSP-- 60
           MADS RR+SG   A  R  QQPSRLQRRAPA+LQINRS  DW VAIPLLSPLVSPSSP  
Sbjct: 1   MADSHRRTSG---ASGRHPQQPSRLQRRAPASLQINRS--DWKVAIPLLSPLVSPSSPKD 60

Query: 61  ----TPTHDSAPTSAS-------SQPEKPPVFKKWQHPAAPFHYDSASRAPRFVPV 104
               TP    A +S+S       S+PEKPPVFKKWQHPAAPFHYDS  RAPRFVPV
Sbjct: 61  IQNWTPDSREASSSSSQHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV 111

[Close]

BLAST of Sed0016632 vs. NCBI nr
Match: XP_022930471.1 (uncharacterized protein At4g14450, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 127.5 bits (319), Expect = 6.7e-26
Identity = 81/119 (68.07%), Postives = 88/119 (73.95%), Query Frame = 0


Query: 1   MADSQRRSSGTGAAQRRQQQQPSRLQRRAPATLQINRSSADWNVAIPLLSPLVSPSSPTP 60
           MA+SQRR SGT A    ++QQPSRLQRRAPA+LQI+RS  DW VAIPLLSPLVSPSSPT 
Sbjct: 1   MAESQRRPSGTAA----RKQQPSRLQRRAPASLQISRS--DWKVAIPLLSPLVSPSSPTE 60

Query: 61  ----THDSAPTSAS-----------SQPEKPPVFKKWQHPAAPFHYDSASRAPR-FVPV 104
               T DS   S+S           S+PEKPPVFKKWQHPAAPFHYDS SRAPR FVPV
Sbjct: 61  IQNWTADSGSISSSSSHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFVPV 113

[Close]

BLAST of Sed0016632 vs. NCBI nr
Match: KAG6593848.1 (putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026180.1 putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 126.3 bits (316), Expect = 1.5e-25
Identity = 81/122 (66.39%), Postives = 88/122 (72.13%), Query Frame = 0


Query: 1   MADSQRRSSGTGAAQRRQQQQPSRLQRRAPATLQINRSSADWNVAIPLLSPLVSPSSPTP 60
           MA+SQRR SGT A    ++QQPSRLQRRAPA+LQI+RS  DW VAIPLLSPLVSPSSPT 
Sbjct: 1   MAESQRRPSGTAA----RKQQPSRLQRRAPASLQISRS--DWKVAIPLLSPLVSPSSPTE 60

Query: 61  ----THDSAPTSAS--------------SQPEKPPVFKKWQHPAAPFHYDSASRAPR-FV 104
               T DS   S+S              S+PEKPPVFKKWQHPAAPFHYDS SRAPR FV
Sbjct: 61  IQNWTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFV 116

[Close]

BLAST of Sed0016632 vs. NCBI nr
Match: XP_023000559.1 (uncharacterized protein At4g14450, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 125.6 bits (314), Expect = 2.6e-25
Identity = 80/121 (66.12%), Postives = 88/121 (72.73%), Query Frame = 0


Query: 1   MADSQRRSSGTGAAQRRQQQQPSRLQRRAPATLQINRSSADWNVAIPLLSPLVSPSSPTP 60
           MA+SQRR+SG  A    ++QQPSRLQRRAPA+LQI+RS  DW VAIPLLSPLVSPSSPT 
Sbjct: 1   MAESQRRASGAAA----RKQQPSRLQRRAPASLQISRS--DWKVAIPLLSPLVSPSSPTE 60

Query: 61  ----THDSAPTSAS-------------SQPEKPPVFKKWQHPAAPFHYDSASRAPR-FVP 104
               T DS   S+S             S+PEKPPVFKKWQHPAAPFHYDS SRAPR FVP
Sbjct: 61  IQNWTADSGSISSSSSHHHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFVP 115

[Close]

BLAST of Sed0016632 vs. ExPASy Swiss-Prot
Match: Q6NN02 (Uncharacterized protein At4g14450, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g14450 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 6.3e-11
Identity = 48/110 (43.64%), Postives = 66/110 (60.00%), Query Frame = 0


Query: 1   MADSQRRSSGTGAAQRRQQQQPSRLQRRAPATLQINRSSADWNVAIPLLSPLVS--PSSP 60
           MA + +R+S + A+  RQ    S+LQRRAP+ +    S ++WNVAIPLLSPL     SS 
Sbjct: 19  MASTMQRTSSSAASNERQL---SQLQRRAPSLMIKPTSFSNWNVAIPLLSPLAPSLTSSF 78

Query: 61  TPTHDSAPTSASSQP-----EKPPVFKKWQHPAAPFHYDSASRAPRFVPV 104
             +H   P + +  P     +K PVFKKWQHPA+PF Y+  +  P F+ V
Sbjct: 79  DQSHVPPPQNKTEIPVEEEVKKTPVFKKWQHPASPFCYEPTTFVPPFIQV 125

[Close]

BLAST of Sed0016632 vs. ExPASy TrEMBL
Match: A0A6J1CA35 (uncharacterized protein At4g14450, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111009774 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.3e-27
Identity = 79/108 (73.15%), Postives = 86/108 (79.63%), Query Frame = 0


Query: 1   MADSQRRSSGTGAAQRRQQQQPSRLQRRAPATLQINRSSADWNVAIPLLSPLVSPSSPTP 60
           MAD+QRR+SG G+   R+QQQPSRLQRRAPA+LQI+RS  DW VAIPLLSPLVSPSSPT 
Sbjct: 1   MADTQRRTSGAGS---RRQQQPSRLQRRAPASLQISRS--DWKVAIPLLSPLVSPSSPTE 60

Query: 61  THDSAPTSASSQ---PEKP--PVFKKWQHPAAPFHYDSASRAPRFVPV 104
             +S   S SSQ   PEKP  PV KKWQHPAAPFHYDS  RAPRFVPV
Sbjct: 61  IQNSREPSTSSQGSDPEKPPVPVTKKWQHPAAPFHYDSGPRAPRFVPV 103

[Close]

BLAST of Sed0016632 vs. ExPASy TrEMBL
Match: A0A6J1ER11 (uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111436912 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 3.3e-26
Identity = 81/119 (68.07%), Postives = 88/119 (73.95%), Query Frame = 0


Query: 1   MADSQRRSSGTGAAQRRQQQQPSRLQRRAPATLQINRSSADWNVAIPLLSPLVSPSSPTP 60
           MA+SQRR SGT A    ++QQPSRLQRRAPA+LQI+RS  DW VAIPLLSPLVSPSSPT 
Sbjct: 1   MAESQRRPSGTAA----RKQQPSRLQRRAPASLQISRS--DWKVAIPLLSPLVSPSSPTE 60

Query: 61  ----THDSAPTSAS-----------SQPEKPPVFKKWQHPAAPFHYDSASRAPR-FVPV 104
               T DS   S+S           S+PEKPPVFKKWQHPAAPFHYDS SRAPR FVPV
Sbjct: 61  IQNWTADSGSISSSSSHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFVPV 113

[Close]

BLAST of Sed0016632 vs. ExPASy TrEMBL
Match: A0A6J1KKB8 (uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111494801 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.2e-25
Identity = 80/121 (66.12%), Postives = 88/121 (72.73%), Query Frame = 0


Query: 1   MADSQRRSSGTGAAQRRQQQQPSRLQRRAPATLQINRSSADWNVAIPLLSPLVSPSSPTP 60
           MA+SQRR+SG  A    ++QQPSRLQRRAPA+LQI+RS  DW VAIPLLSPLVSPSSPT 
Sbjct: 1   MAESQRRASGAAA----RKQQPSRLQRRAPASLQISRS--DWKVAIPLLSPLVSPSSPTE 60

Query: 61  ----THDSAPTSAS-------------SQPEKPPVFKKWQHPAAPFHYDSASRAPR-FVP 104
               T DS   S+S             S+PEKPPVFKKWQHPAAPFHYDS SRAPR FVP
Sbjct: 61  IQNWTADSGSISSSSSHHHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFVP 115

[Close]

BLAST of Sed0016632 vs. ExPASy TrEMBL
Match: A0A1S3CDB1 (uncharacterized protein At4g14450, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103499403 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 6.3e-22
Identity = 76/132 (57.58%), Postives = 82/132 (62.12%), Query Frame = 0


Query: 1   MADSQRRSSGTGAAQRRQQQQPSRLQRRAPATLQINRSSADWNVAIPLLSPLVSPSSP-- 60
           MADS RR+S T     R  QQPSRLQRRAPA+LQINRS  DW VAIPLLSPLVSPSSP  
Sbjct: 1   MADSHRRTSPT---TTRHPQQPSRLQRRAPASLQINRS--DWKVAIPLLSPLVSPSSPKD 60

Query: 61  ----TPTHDSAPTSASS-----------------------QPEKPPVFKKWQHPAAPFHY 104
               TP    A +++SS                       + EK PVFKKWQHPAAPFHY
Sbjct: 61  IQNWTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKAPVFKKWQHPAAPFHY 120

[Close]

BLAST of Sed0016632 vs. ExPASy TrEMBL
Match: A0A0A0LLJ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G190740 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.0e-20
Identity = 66/107 (61.68%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 22  PSRLQRRAPATLQINRSSADWNVAIPLLSPLVSPSS----------PTPTHDSAPTSAS- 81
           PSRLQRRAPA+LQINRS  DW VAIPLLSPLVSPSS          P     S+ TS+S 
Sbjct: 14  PSRLQRRAPASLQINRS--DWKVAIPLLSPLVSPSSSPKDIHSWSTPDSRQPSSTTSSSS 73

Query: 82  --------------SQPEKPPVFKKWQHPAAPFHYDSASRAPRFVPV 104
                         S PEK PVFKKWQHPAAPFHYDS +RAPRFVPV
Sbjct: 74  HHHHLLHHHHHHKESDPEKAPVFKKWQHPAAPFHYDSGARAPRFVPV 118

[Close]

BLAST of Sed0016632 vs. TAIR 10
Match: AT1G04330.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 74.3 bits (181), Expect = 6.3e-14
Identity = 47/95 (49.47%), Postives = 56/95 (58.95%), Query Frame = 0


Query: 1  MADSQRRSSGTGAAQRRQQQQPSRLQRRAPATLQINRSSADWNVAIPLLSPLVS-PSSPT 60
          M+ + R  SG+G       ++ SRLQRRAP  L+IN   A+W VAIPLLSP  S P  P 
Sbjct: 1  MSSTARNISGSG------NRKSSRLQRRAPPPLKINPCEANWKVAIPLLSPTESPPQKPP 60

Query: 61 PTHDSAPTSASSQPEKPPVFKKWQHPAAPFHYDSA 95
                      + EKPPVFKKWQHPAAPF+Y  A
Sbjct: 61 AVMKREEQRWGKEAEKPPVFKKWQHPAAPFYYQPA 89

[Close]

BLAST of Sed0016632 vs. TAIR 10
Match: AT3G23170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14450.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 3.1e-13
Identity = 45/91 (49.45%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 19  QQQPSRLQRRAPATLQINRSSA--DWNVAIPLLSPLVSPSSPTPTHDSAPT----SASSQ 78
           ++QPSRL +R PA   +  + A  +WN AIPLLSPL      +P  D  P     S +  
Sbjct: 18  RRQPSRLLKRPPALKIVPATPAANNWNTAIPLLSPLALSPESSPV-DQPPVEKNQSTAVA 77

Query: 79  PEKPPVFKKWQHPAAPFHYDSASRAPRFVPV 104
            EK PVFKKWQHPAAPF+Y+S++  P FVPV
Sbjct: 78  VEKTPVFKKWQHPAAPFYYESSTFVPPFVPV 107

[Close]

BLAST of Sed0016632 vs. TAIR 10
Match: AT4G14450.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 68.2 bits (165), Expect = 4.5e-12
Identity = 48/110 (43.64%), Postives = 66/110 (60.00%), Query Frame = 0


Query: 1   MADSQRRSSGTGAAQRRQQQQPSRLQRRAPATLQINRSSADWNVAIPLLSPLVS--PSSP 60
           MA + +R+S + A+  RQ    S+LQRRAP+ +    S ++WNVAIPLLSPL     SS 
Sbjct: 19  MASTMQRTSSSAASNERQL---SQLQRRAPSLMIKPTSFSNWNVAIPLLSPLAPSLTSSF 78

Query: 61  TPTHDSAPTSASSQP-----EKPPVFKKWQHPAAPFHYDSASRAPRFVPV 104
             +H   P + +  P     +K PVFKKWQHPA+PF Y+  +  P F+ V
Sbjct: 79  DQSHVPPPQNKTEIPVEEEVKKTPVFKKWQHPASPFCYEPTTFVPPFIQV 125

The following BLAST results are available for this feature:

BLAST of Sed0016632 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138670.1	4.7e-27	73.15	uncharacterized protein At4g14450, chloroplastic-like [Momordica charantia]	[more]
XP_038875425.1	2.3e-26	68.97	uncharacterized protein At4g14450, chloroplastic-like [Benincasa hispida]	[more]
XP_022930471.1	6.7e-26	68.07	uncharacterized protein At4g14450, chloroplastic-like [Cucurbita moschata]	[more]
KAG6593848.1	1.5e-25	66.39	putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]...	[more]
XP_023000559.1	2.6e-25	66.12	uncharacterized protein At4g14450, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of Sed0016632 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NN02	6.3e-11	43.64	Uncharacterized protein At4g14450, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Sed0016632 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CA35	2.3e-27	73.15	uncharacterized protein At4g14450, chloroplastic-like OS=Momordica charantia OX=...	[more]
A0A6J1ER11	3.3e-26	68.07	uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1KKB8	1.2e-25	66.12	uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita maxima OX=366...	[more]
A0A1S3CDB1	6.3e-22	57.58	uncharacterized protein At4g14450, chloroplastic-like OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0LLJ8	2.0e-20	61.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G190740 PE=4 SV=1	[more]

BLAST of Sed0016632 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04330.1	6.3e-14	49.47	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G23170.1	3.1e-13	49.45	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G14450.1	4.5e-12	43.64	unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR33912:SF2	PUTATIVE-RELATED	coord: 12..102
IPR040381	Uncharacterized protein At4g14450-like	PANTHER	PTHR33912	OS01G0939400 PROTEIN	coord: 12..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016632.1	Sed0016632.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005622	intracellular anatomical structure