Sed0016572 (gene) Chayote v1

Overview


Name	Sed0016572
Type	gene
Organism	Sechium edule (Chayote v1)
Description	axial regulator YABBY 4
Location	LG06: 41269917 .. 41274637 (-)
RNA-Seq Expression	Sed0016572
Synteny	Sed0016572

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCATCTCTTTGAACTGCCTGAGCAAATTTGTTGTGTGCAATGTGGAATTTGCACCACCATTTTGTTGGCAAGTTGGTGTTCTTCATTGTTATTAAGCTTCCATTTAAGTGAATGATTCTTCATGCTCCTTACTTTGCTCGGAAATGCAGGTCATTGTGCCGTGCATCAGCTTGTCGATGTCGGTGACGGTGGCATGCGGCCACTGCTCAAGTCTCCTCTCTGTCAACATGATGAAAGCCACTCTGGTTCCTCCTCATTTTCTGTCTTCTCTTTCTCGCAATGCGGTAAACGCTTTATACATGTTTTGCACTTTTCCTTTTTGAGTTCAGTTATAGGGTGGGAGATTGAACTCATGATCTCTTGGTTCATAAGTATATATTGATACTGTTGAACTATTATTCTGGTTGGTATAGATGTTTTTTGCAATTTTTCTTTTTACTTTCAACAACAGGTACGAGACCGATCGAACTTGTTCGATTATTGATGCCGTCGAGCTGTTGCTGTTGTTGGAAGCGATGTTTTGCACTTTTCTGTGCTGTTGACGTTAAAATCCTTACCTTTTTTTCCTGTCTTTTCAGTCCAAAGAAGCTTGTGGAGAAAGAGAATTTCAAGTTGAAGAAGACTTGATTCCTGTGACATTCCTGTTGTAAACAAACGTAAGAACATTGTAAGTTGTAATTATAACAATTAAGACTCATTTAATAACCATTTTGTTTTTTATTTTTTGTTTATAGTTTTTTATTTTTGGTTTTGGTTATAAAAAATAAAAATCATATATCTTTCGTAATTCATTTTAGTTTTATATTTTTAAAAATAAAAAATAAAAAAACATGTTTGATAACTTTTTTTTGTTTTCAAATATAACATTTTATTTTGATTTTTTTAATTTTAATTTTTGAAAATTGAGATATCGGAGTTTCACTCCCTTATACCCAGAATACCACTGATCCGTTCTTAGATTGTGACACCGGAAAAATATTTTAGTTTAAACGTTTTCACGTTCTTGAACTAGGAATTTCTCAAAAAAGTAAGTTGCTATTTCAAGTCACAAATGATTAACCATTAACTTATATAAAACACAAAGATTCACTTGTGAAGTCGATCTACAAAGTAAAATTTTATAGCAATATTGGCCATAGTTAAAAAAAAAAAGGTTTTAAAAAAAAACAATAGAGTTTTTAAAAATAACAATAAAACAGGAATAATTGGGCCGCGATGTTTTAGCCCACAAAGCCCATAAGTAAATGGGTCGCCAATTAAAAAGCATATTTGAGTTCTGAAAATATTACCGTTGCATAATACGCTCCATCCCTCCGAGAGAAATCCACCGACGCATTCCTCTTCTCTTCTCTCTTTTCCCGGAGAGAAATCCACCGCCGAAGGCCGACGGTTGCGCGTGTTGCAGCGGCGGCGGCGGAGAAGGGTTCTTACGTCGTCCGTTGAGGTAATCAATTTCAATATGTGTAACTATTACGGTTTTAAGAGAATTTGATGGATTCATTATCGTCTGTTCACTTTAATTGATGTCTGCAGTGAGGAATTTGATGAATTTCAACATGTATAATGTTTTATGTTGTTTTTATTTCTGTTTTAGGGATCTGATTTCATAAACCTATTTTTGATCGATGGATAAAAAACCTAAACGAGAGATTAAATCATTAAACAGTACAAAAAGTTAGTTTTAGTCTGTAGTGTAGCGAGGACTGTTAATTTGTTTTGTTGTTAGTATTTCTGTTTGGGAATCTGATCCCATAAACCCTCAATATTTTGTTTCAATTGAGTGTTTAAGCCTGCATTGAGGACTAGTAATTTGTTTTGTTGTTATTATTTTTTCTATTTAGGAATCTGTTCTCACGAACCCTTTTCCAATATTCTGTTTGAATTGAGTGTTTGGTTTGGTGGTTTTGATTAATGGATGCAAGGCGTAAACATGAGAGATGTATTCGAGATTAGACCGTAAAAAGAGTTTGTTTAAGCCTGTAGTGTAGTGGGGAATGGTAATTTGTTTTACTGTTACTATTTCTATTTCGGAATCTGGTTTCACAAACCCTTTTCTTGCATCCTGTTTCAATTGAGTATTTGATTTGGTGATTTTGATTGATTGATTGATGCGAAACCCAAACGTGGGAGATGTATTAGAGATTAGAAGTAGAAAGAATTAGTTCAAGTCTGCAGCGAGGACTGGTAATTTATTTTGTGTTAGTATTTCTATTTAATTAAGAATCTGATTTTGTGAACCCTTGTCTGATATCCTGTTCTAATTGAGTGTTTTTGGTTTGATGGTTTTGATCGATTGATGAAATCATGAGAGATGTATGGAAGTTTAGAAAGTACAAAGAATTAGCAAGTCTGTTGTGAGGCTGGTAATTTGTTTTGTTGTTAGTATTTATTCAGTAACCTGATTTCATAAACTCTTTTCTGATATCCTCTTTTCTGTTACCATGTTGATTGATTGATGAAAACATAAACGTGAGAGGTGTATTAGAGATTAAACAGTGCACAGAATCGGTTTAAGTCTACAGTGTGGACTGGACTGGTAATTTATTTTGTTAGTATTCTTATTTGGGAATCCGATAAACCTAAACGTGAAAGATGTATTTGAGATTATAAGTACAAAGAATTAATTTAAGTCTGCAGTGAGGACTAGTAATTTATTTTGTTGCTAGTATTTCTATTTAGAAATCTAATTTCAAAAATCATTTTCTGATATCCATCTCCTGTTTCAATTGAGTATTTGGTTTTGTGGTTTTCTTTGATTGATGAAAAACATAAACGTGAGAGATGTATGTATTAGGGAATAGGAAGTACAAGTAAGGATTGGTAATTTGTATTGTTGTTAGTATTTCTATTTAGGAATTTTATTTCACAAACCCTTTGATGATATCCTCTTTCAATTGAGTATTTCGATTGAACCATCATGGAATGGCCCTAGCGGTCAAGAGGGCCTTAGGGTGGGCACCTACCTAGGAATTAATTTTCTATGGATTTCCTTGTCATTCAAATGTTGTTGGGTCAGACGGTATGTTCCTTGACAACAGTCGAGGTTGTGGCAAGATGGTCAGATTTTTTTTTAAATTTTTTTTAATTGAATTCGATAATAATTCGAGGTAGGGGGTTCAAACTCGTAATAGCTTGGTTATAGGGTCGTCGTACATGAGGCCATTGTAGCGTGAAAGTTGTTTCAGATGGGAAAGTACAAAAAGTTAGGGTAGGAAGCGCCAGGTGAAACTAAGATTTAGGAAGAAGGGACCTTGGAAATTAAGGAATCATTAATTTTAGACTAAAAAAAAGGGCAGAACTTGTTGCAGAAGGAGACAATTCAAGAATTAAAGAGATAAAGATTCAAGAACTAAAAAAAAAGAAAGTTTCAGATCATTCAATGCTTCTATAAATACACCATTTATCTAATAATAGCATCGGAAGGAAAATACAACTTATTTGAAATGGTAACTATGAGGATGAATCTTCTCTTAAACTCATCTTCTTCTTGGTGCTTATGCATTTTCTGATTGTTTTTCATTTATAAATTGCATTTTGTCTTCTCGTATTTGTTTGTCGATTGTTGAAACTGGAAGATATATGCGTCATTTTCTTCCCGTGCATGGAATTACAACATAATAGAATAAGAATCTATAAACTTAAATGTAAAGTTCAAAGAGACCAAAACCTTTTTTCGTAAGCTAATGCTCTTGGTTACTTTTATTTTATTCTTTGGTTTTGACTATTTTTGTTACAAACCTTTTTCTAATAATTAATTCTACTCCCCCAAATATTTTTTCGTTTTTTATTTTTTTCCCTCACTTCATCTACTCACCTTTTCACTTAATTCTGTAATTTTCACTCTCTCTGACTTGATTCTATTTCTAAACTTATTTAACTTTGTACAATTACACATTTTCCTTTTAGTTTTTTCTTAATCATCATAAATTTGTTTAATTATTTTTGGATCTATGAGTGGCTAGATTATCTTAGGCACGACTATTCTCACGAGTCAAACCACATGCTCTATGATATTTAGATGTCAAGAAAACCTGTAGGAAATTATTTTATTTTAAAAAGTTTTCACTCTTGTATCGTGATAGAAATTTAGGGCCCATAAATTTCTATCCTATGATACAAGAGTAGAAACGTTTTAAAAGGAAAATTAAATTTCTATCTTGTTCCCCTTTTAATTGTTTTCTTAAATTTTTTTGGCAAGTATCTTTTGTATCGTTTACGTTATAGAATTCACTACTTTATAAAAATCCATCATTAAAGTTCTTGTTCTATTCAGGAATATGATTTTACAAACCCTTTTCTGATATCCTCTTTTCTGTTATCATGTTTCATTTGAGTATTTGGTTTGGTGATTTTGATTGATTGATTGATAAACGTGAATCTCTAATACACCTCTAAGTCTACAATCGGGACTGGTAATTTGTTTTGTTGTTAGTATTTCTATTTAGGAATCTGATCTCATAAACACTTTTTCGAACATTCTGTTTCAATTGAGTTTTTGGTTTGATTGATGAAAAACCTAAACGTGAAAGATGTATTAAAGATTATAAGTACAAAGAATTAATTTAAGTCTGCAGTTAGGACTAGTAATTTGTTTTGTTGCTAGTATTTCTATTTAGGAATCTAATTTCAAAAATCATTTTCTGATATCATGTTTGAATTGAGTATTTGGTTTTGTGGTTTTCTTTGATTGATGAAAAACATGAACGTGAGAGATGA

mRNA sequence

ATGAACCATCTCTTTGAACTGCCTGAGCAAATTTGTTGTGTGCAATGTGGAATTTGCACCACCATTTTGTTGGTCATTGTGCCGTGCATCAGCTTGTCGATGTCGGTGACGGTGGCATGCGGCCACTGCTCAAGTCTCCTCTCTGTCAACATGATGAAAGCCACTCTGGTTCCTCCTCATTTTCTGTCTTCTCTTTCTCGCAATGCGTCCAAAGAAGCTTGTGGAGAAAGAGAATTTCAAGTTGAAGAAGACTTGATTCCTAGAAATCCACCGCCGAAGGCCGACGGTTGCGCAGATAAAGATTCAAGAACTAAAAAAAAAGAAAGTTTCAGATCATTCAATTATTTGGTTTTGTGGTTTTCTTTGATTGATGAAAAACATGAACGTGAGAGATGA

Coding sequence (CDS)

ATGAACCATCTCTTTGAACTGCCTGAGCAAATTTGTTGTGTGCAATGTGGAATTTGCACCACCATTTTGTTGGTCATTGTGCCGTGCATCAGCTTGTCGATGTCGGTGACGGTGGCATGCGGCCACTGCTCAAGTCTCCTCTCTGTCAACATGATGAAAGCCACTCTGGTTCCTCCTCATTTTCTGTCTTCTCTTTCTCGCAATGCGTCCAAAGAAGCTTGTGGAGAAAGAGAATTTCAAGTTGAAGAAGACTTGATTCCTAGAAATCCACCGCCGAAGGCCGACGGTTGCGCAGATAAAGATTCAAGAACTAAAAAAAAAGAAAGTTTCAGATCATTCAATTATTTGGTTTTGTGGTTTTCTTTGATTGATGAAAAACATGAACGTGAGAGATGA

Protein sequence

MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPHFLSSLSRNASKEACGEREFQVEEDLIPRNPPPKADGCADKDSRTKKKESFRSFNYLVLWFSLIDEKHERER

Homology

[Close]

BLAST of Sed0016572 vs. NCBI nr
Match: KAG6601510.1 (Axial regulator YABBY 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 132.9 bits (333), Expect = 2.0e-27
Identity = 73/108 (67.59%), Postives = 78/108 (72.22%), Query Frame = 0


Query: 1   MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPH 60
           MNHLFELPE+IC VQCGICTTILLV VPC SLSM VTV CGHCSSLLSVNM++ATLVP H
Sbjct: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60

Query: 61  FLSSLSRNASKEACGE-----------------REFQVEEDLIPRNPP 92
           FLSSLSRN  KEAC E                  E++VEE LIP  PP
Sbjct: 61  FLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPP 108

[Close]

BLAST of Sed0016572 vs. NCBI nr
Match: KAG7032292.1 (Axial regulator YABBY 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 132.9 bits (333), Expect = 2.0e-27
Identity = 79/136 (58.09%), Postives = 85/136 (62.50%), Query Frame = 0


Query: 1   MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPH 60
           MNHLFELPE+IC VQCGICTTILLV VPC SLSM VTV CGHCSSLLSVNM++ATLVP H
Sbjct: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60

Query: 61  FLSSLSRNASKEACGE-----------------REFQVEEDLIPRNPP------------ 108
           FLSSLSRN  KEAC E                  E++VEE LIP  PP            
Sbjct: 61  FLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKPPEKRQRV 120

[Close]

BLAST of Sed0016572 vs. NCBI nr
Match: XP_023511764.1 (axial regulator YABBY 4 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 132.5 bits (332), Expect = 2.7e-27
Identity = 79/136 (58.09%), Postives = 84/136 (61.76%), Query Frame = 0


Query: 1   MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPH 60
           MNHLFELPE+IC VQCGICTTILLV VPC SLSM VTV CGHCSSLLSVNMM+ATLVP H
Sbjct: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMMRATLVPLH 60

Query: 61  FLSSLSRNASKEACGE-----------------REFQVEEDLIPRNPP------------ 108
           FLSSLSRN  KE C E                  E++VEE LIP  PP            
Sbjct: 61  FLSSLSRNLPKEGCREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKPPEKRQRV 120

[Close]

BLAST of Sed0016572 vs. NCBI nr
Match: XP_023511765.1 (axial regulator YABBY 4 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 132.5 bits (332), Expect = 2.7e-27
Identity = 79/136 (58.09%), Postives = 84/136 (61.76%), Query Frame = 0


Query: 1   MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPH 60
           MNHLFELPE+IC VQCGICTTILLV VPC SLSM VTV CGHCSSLLSVNMM+ATLVP H
Sbjct: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMMRATLVPLH 60

Query: 61  FLSSLSRNASKEACGE-----------------REFQVEEDLIPRNPP------------ 108
           FLSSLSRN  KE C E                  E++VEE LIP  PP            
Sbjct: 61  FLSSLSRNLPKEGCREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKPPEKRQRV 120

[Close]

BLAST of Sed0016572 vs. NCBI nr
Match: XP_023511763.1 (axial regulator YABBY 4 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 132.5 bits (332), Expect = 2.7e-27
Identity = 79/136 (58.09%), Postives = 84/136 (61.76%), Query Frame = 0


Query: 1   MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPH 60
           MNHLFELPE+IC VQCGICTTILLV VPC SLSM VTV CGHCSSLLSVNMM+ATLVP H
Sbjct: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMMRATLVPLH 60

Query: 61  FLSSLSRNASKEACGE-----------------REFQVEEDLIPRNPP------------ 108
           FLSSLSRN  KE C E                  E++VEE LIP  PP            
Sbjct: 61  FLSSLSRNLPKEGCREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKPPEKRQRV 120

[Close]

BLAST of Sed0016572 vs. ExPASy Swiss-Prot
Match: Q9LDT3 (Axial regulator YABBY 4 OS=Arabidopsis thaliana OX=3702 GN=YAB4 PE=1 SV=2)

HSP 1 Score: 94.7 bits (234), Expect = 8.0e-19
Identity = 48/66 (72.73%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 1  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPH 60
          +NHLF+LP QIC VQCG CTTILLV VP  SLSM VTV CGHC+SLLSVN+MKA+ +P H
Sbjct: 11 LNHLFDLPGQICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNLMKASFIPLH 70

Query: 61 FLSSLS 67
           L+SLS
Sbjct: 71 LLASLS 76

[Close]

BLAST of Sed0016572 vs. ExPASy Swiss-Prot
Match: A2X7Q3 (Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06
Identity = 29/51 (56.86%), Postives = 34/51 (66.67%), Query Frame = 0


Query: 9  EQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPP 60
          EQ+C V C  C TIL V VPC SL  +VTV CGHC++LLSVN+    L  P
Sbjct: 23 EQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAP 73

[Close]

BLAST of Sed0016572 vs. ExPASy Swiss-Prot
Match: Q6H668 (Protein YABBY 4 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB4 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06
Identity = 29/51 (56.86%), Postives = 34/51 (66.67%), Query Frame = 0


Query: 9  EQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPP 60
          EQ+C V C  C TIL V VPC SL  +VTV CGHC++LLSVN+    L  P
Sbjct: 23 EQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAP 73

[Close]

BLAST of Sed0016572 vs. ExPASy Swiss-Prot
Match: Q01JG2 (Protein YABBY 5 OS=Oryza sativa subsp. indica OX=39946 GN=YAB5 PE=3 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 1.6e-06
Identity = 29/50 (58.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 9  EQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVP 59
          EQ+C V C  C TIL V VPC SL  +VTV CGHC++LLSVN ++  L+P
Sbjct: 29 EQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGHCANLLSVN-LRGLLLP 77

[Close]

BLAST of Sed0016572 vs. ExPASy Swiss-Prot
Match: Q0JBF0 (Protein YABBY 5 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB5 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.6e-06
Identity = 29/50 (58.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 9  EQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVP 59
          EQ+C V C  C TIL V VPC SL  +VTV CGHC++LLSVN ++  L+P
Sbjct: 29 EQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGHCANLLSVN-LRGLLLP 77

[Close]

BLAST of Sed0016572 vs. ExPASy TrEMBL
Match: A0A6J1JEX5 (axial regulator YABBY 4 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111483786 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.9e-27
Identity = 78/136 (57.35%), Postives = 84/136 (61.76%), Query Frame = 0


Query: 1   MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPH 60
           MNHLFELPE+IC VQCGICTTILLV VPC SLSM VTV CGHCSSLLSVNM++ATLVP H
Sbjct: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60

Query: 61  FLSSLSRNASKEACGE-----------------REFQVEEDLIPRNPP------------ 108
           FLSSLSRN  KE C E                  E++VEE LIP  PP            
Sbjct: 61  FLSSLSRNLPKETCREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKPPEKRQRV 120

[Close]

BLAST of Sed0016572 vs. ExPASy TrEMBL
Match: A0A6J1JCH4 (axial regulator YABBY 4 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483786 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.9e-27
Identity = 78/136 (57.35%), Postives = 84/136 (61.76%), Query Frame = 0


Query: 1   MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPH 60
           MNHLFELPE+IC VQCGICTTILLV VPC SLSM VTV CGHCSSLLSVNM++ATLVP H
Sbjct: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60

Query: 61  FLSSLSRNASKEACGE-----------------REFQVEEDLIPRNPP------------ 108
           FLSSLSRN  KE C E                  E++VEE LIP  PP            
Sbjct: 61  FLSSLSRNLPKETCREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKPPEKRQRV 120

[Close]

BLAST of Sed0016572 vs. ExPASy TrEMBL
Match: A0A6J1J630 (axial regulator YABBY 4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483786 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.9e-27
Identity = 78/136 (57.35%), Postives = 84/136 (61.76%), Query Frame = 0


Query: 1   MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPH 60
           MNHLFELPE+IC VQCGICTTILLV VPC SLSM VTV CGHCSSLLSVNM++ATLVP H
Sbjct: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60

Query: 61  FLSSLSRNASKEACGE-----------------REFQVEEDLIPRNPP------------ 108
           FLSSLSRN  KE C E                  E++VEE LIP  PP            
Sbjct: 61  FLSSLSRNLPKETCREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKPPEKRQRV 120

[Close]

BLAST of Sed0016572 vs. ExPASy TrEMBL
Match: A0A1S3BDZ8 (axial regulator YABBY 4 OS=Cucumis melo OX=3656 GN=LOC103488996 PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 3.7e-27
Identity = 85/169 (50.30%), Postives = 95/169 (56.21%), Query Frame = 0


Query: 1   MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPH 60
           MNHLF+LPE+IC VQCGICTTILLV VPC SLSM+VTV CGHCSSLLSVNMMKATLVP H
Sbjct: 1   MNHLFDLPEKICYVQCGICTTILLVSVPCSSLSMAVTVTCGHCSSLLSVNMMKATLVPLH 60

Query: 61  FLSSLSRNASKEACGE-----------------REFQVEEDLIPRNPP------------ 120
           FLSSLS N  KE   E                  E++VEEDLIP   P            
Sbjct: 61  FLSSLSHNVPKETYREMNSGKFFDSFKRSKLKFSEYEVEEDLIPATTPFVNKPPEKRQRA 120

Query: 121 PKADGCADKDS---------RTKKKESFRSFNYLVLWFSLIDEKHERER 132
           P A  C  KD              KE+FR+       F  I EK ++E+
Sbjct: 121 PSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAKNWANFPPIQEKDDKEK 169

[Close]

BLAST of Sed0016572 vs. ExPASy TrEMBL
Match: A0A6J1GXS4 (axial regulator YABBY 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458453 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 6.4e-27
Identity = 78/136 (57.35%), Postives = 84/136 (61.76%), Query Frame = 0


Query: 1   MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPH 60
           MNH FELPE+IC VQCGICTTILLV VPC SLSM VTV CGHCSSLLSVNM++ATLVP H
Sbjct: 1   MNHPFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60

Query: 61  FLSSLSRNASKEACGE-----------------REFQVEEDLIPRNPP------------ 108
           FLSSLSRN  KEAC E                  E++VEE LIP  PP            
Sbjct: 61  FLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVHKPPEKRQRV 120

[Close]

BLAST of Sed0016572 vs. TAIR 10
Match: AT1G23420.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 94.7 bits (234), Expect = 5.7e-20
Identity = 48/66 (72.73%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 1  MNHLFELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKATLVPPH 60
          +NHLF+LP QIC VQCG CTTILLV VP  SLSM VTV CGHC+SLLSVN+MKA+ +P H
Sbjct: 11 LNHLFDLPGQICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNLMKASFIPLH 70

Query: 61 FLSSLS 67
           L+SLS
Sbjct: 71 LLASLS 76

[Close]

BLAST of Sed0016572 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 51.6 bits (122), Expect = 5.5e-07
Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 0


Query: 5  FELPEQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNM-MKATLVP 59
          F   +Q+C V C  C T+L V VP  SL  +VTV CGHCS+LLSV + M+A L+P
Sbjct: 19 FSSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLP 73

[Close]

BLAST of Sed0016572 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.2e-06
Identity = 38/96 (39.58%), Postives = 47/96 (48.96%), Query Frame = 0


Query: 9   EQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKA--TLVPPHF----- 68
           EQ+C + C  C  IL V VPC SL   VTV CGHC++L SVNM  A  +L  P+F     
Sbjct: 9   EQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQATNY 68

Query: 69  ----LSSLSRNASKEACGEREFQVEEDLIPRNPPPK 94
                 S SR+ +K         + E  I   PP K
Sbjct: 69  AVPEYGSSSRSHTKIPSRISTRTITEQRIVNRPPEK 104

[Close]

BLAST of Sed0016572 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.2e-06
Identity = 38/96 (39.58%), Postives = 47/96 (48.96%), Query Frame = 0


Query: 9   EQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNMMKA--TLVPPHF----- 68
           EQ+C + C  C  IL V VPC SL   VTV CGHC++L SVNM  A  +L  P+F     
Sbjct: 9   EQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQATNY 68

Query: 69  ----LSSLSRNASKEACGEREFQVEEDLIPRNPPPK 94
                 S SR+ +K         + E  I   PP K
Sbjct: 69  AVPEYGSSSRSHTKIPSRISTRTITEQRIVNRPPEK 104

[Close]

BLAST of Sed0016572 vs. TAIR 10
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 50.1 bits (118), Expect = 1.6e-06
Identity = 28/54 (51.85%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 9  EQICCVQCGICTTILLVIVPCISLSMSVTVACGHCSSLLSVNM---MKATLVPP 60
          E++C V C  CTTIL V VP  SL   VTV CGHC++LLS+N+   +  T  PP
Sbjct: 8  ERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPP 61

The following BLAST results are available for this feature:

BLAST of Sed0016572 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601510.1	2.0e-27	67.59	Axial regulator YABBY 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7032292.1	2.0e-27	58.09	Axial regulator YABBY 4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023511764.1	2.7e-27	58.09	axial regulator YABBY 4 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023511765.1	2.7e-27	58.09	axial regulator YABBY 4 isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_023511763.1	2.7e-27	58.09	axial regulator YABBY 4 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0016572 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDT3	8.0e-19	72.73	Axial regulator YABBY 4 OS=Arabidopsis thaliana OX=3702 GN=YAB4 PE=1 SV=2	[more]
A2X7Q3	1.2e-06	56.86	Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1	[more]
Q6H668	1.2e-06	56.86	Protein YABBY 4 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB4 PE=2 SV=1	[more]
Q01JG2	1.6e-06	58.00	Protein YABBY 5 OS=Oryza sativa subsp. indica OX=39946 GN=YAB5 PE=3 SV=2	[more]
Q0JBF0	1.6e-06	58.00	Protein YABBY 5 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB5 PE=2 SV=1	[more]

BLAST of Sed0016572 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JEX5	2.9e-27	57.35	axial regulator YABBY 4 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111483786 P...	[more]
A0A6J1JCH4	2.9e-27	57.35	axial regulator YABBY 4 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483786 P...	[more]
A0A6J1J630	2.9e-27	57.35	axial regulator YABBY 4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483786 P...	[more]
A0A1S3BDZ8	3.7e-27	50.30	axial regulator YABBY 4 OS=Cucumis melo OX=3656 GN=LOC103488996 PE=3 SV=1	[more]
A0A6J1GXS4	6.4e-27	57.35	axial regulator YABBY 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of Sed0016572 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23420.1	5.7e-20	72.73	Plant-specific transcription factor YABBY family protein	[more]
AT4G00180.1	5.5e-07	52.73	Plant-specific transcription factor YABBY family protein	[more]
AT2G26580.1	1.2e-06	39.58	plant-specific transcription factor YABBY family protein	[more]
AT2G26580.2	1.2e-06	39.58	plant-specific transcription factor YABBY family protein	[more]
AT1G08465.1	1.6e-06	51.85	Plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 8..71 e-value: 3.9E-20 score: 73.1
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 1..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..105
None	No IPR available	PANTHER	PTHR31675:SF8	AXIAL REGULATOR YABBY 4	coord: 1..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016572.1	Sed0016572.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development