Sed0016529 (gene) Chayote v1

Overview


Name	Sed0016529
Type	gene
Organism	Sechium edule (Chayote v1)
Description	two-component response regulator ORR24-like
Location	LG08: 3283007 .. 3283998 (-)
RNA-Seq Expression	Sed0016529
Synteny	Sed0016529

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGAGTCGACAAAACCGCGATGTTGATCGATTTCCAATTGGTTTGAGAGTTCTGGCAATGGATGCCAATGTTGTGTGCCTCACATATCTGCTTCATCTTCTCCATAAGTGTCATTACAAAGGTACGTTTTATCAAGTTTTGGATCATTTTTTAACCTCTTTCTTTCAATTCTTTAAGTTTTGCGTAACCCCCAAGTTTCGATTTGGTACGATGATGTTTGTTGGGTTAAGGAGAAGTTATTTTCGACCAAATTCAACTCAATCCCTAAATCTTAGCTATAAACCGTAATTAGCTATTTACCTTTTTTTTTTAATAATTGTAGTAACTGCAACTACGGAAGCTACGGAAGCAGTAAGACTATTGAAGGATGAAAAACAAGCTTTTGATATCATTATTACAAATGTTGTGAGATCCGACATGGATGGCTTCACGTTCCTCCAAATTGTTATGAGTCTCAGAATCAACATTCCAGTCGTTAGTAAGTACTTTCCTTTCTTTATTGTAGAGATTCGAACCTATAATTTTATAGTTATCGTGTTGTATATGTTGTCCCATAATCATTTCCTCAAATTTCTTTAAGGGAAGACTTTGAGTGTGTTTTTTTTTAAATGAAAAATCTAAAATAAGCCTAAATTTCTGTGGTGTCTGCAAATGAGGAATTGGAGATGGCAAAAAGGGGCGTAATGGAAGGAGCCGATGCCTATTTACTGAAACCCGTTTGCTTAAGAGAATTGAGGAATCTTTGGCAACACGTTTTGCGAAGAAGATCGTCAAACCCTAATTTCATTGAACAACAACTTCAACCAATTTCTCATACAATGAATAAGGAATTAGATGATGAAATTAACGTTGTTTCATCCTCGACCTCATCGAAGAAGCGTCGAGTGGCTTGGACTAAGATGTTACACGACAAGTTTCTTGCAGCCTATAACCAATTGGGAGAAAAGGGTAACAATGATATATTCTTTATTCATTACTCTTTTTAA

mRNA sequence

ATGGAAGAGAGTCGACAAAACCGCGATGTTGATCGATTTCCAATTGGTTTGAGAGTTCTGGCAATGGATGCCAATGTTGTGTGCCTCACATATCTGCTTCATCTTCTCCATAAGTGTCATTACAAAGGTACGTTTTATCAAGTTTTGGATCATTTTTTAACCTCTTTCTTTCAATTCTTTAAGTTTTGCGTAACCCCCAAGTTTCGATTTGCTATTTACCTTTTTTTTTTAATAATTGTAGTAACTGCAACTACGGAAGCTACGGAAGCAGTAAGACTATTGAAGGATGAAAAACAAGCTTTTGATATCATTATTACAAATGTTGTGAGATCCGACATGGATGGCTTCACGTTCCTCCAAATTGTTATGAGTCTCAGAATCAACATTCCAGTCGAATTGGAGATGGCAAAAAGGGGCGTAATGGAAGGAGCCGATGCCTATTTACTGAAACCCGTTTGCTTAAGAGAATTGAGGAATCTTTGGCAACACGTTTTGCGAAGAAGATCGTCAAACCCTAATTTCATTGAACAACAACTTCAACCAATTTCTCATACAATGAATAAGGAATTAGATGATGAAATTAACGTTGTTTCATCCTCGACCTCATCGAAGAAGCGTCGAGTGGCTTGGACTAAGATGTTACACGACAAGTTTCTTGCAGCCTATAACCAATTGGGAGAAAAGGGTAACAATGATATATTCTTTATTCATTACTCTTTTTAA

Coding sequence (CDS)

ATGGAAGAGAGTCGACAAAACCGCGATGTTGATCGATTTCCAATTGGTTTGAGAGTTCTGGCAATGGATGCCAATGTTGTGTGCCTCACATATCTGCTTCATCTTCTCCATAAGTGTCATTACAAAGGTACGTTTTATCAAGTTTTGGATCATTTTTTAACCTCTTTCTTTCAATTCTTTAAGTTTTGCGTAACCCCCAAGTTTCGATTTGCTATTTACCTTTTTTTTTTAATAATTGTAGTAACTGCAACTACGGAAGCTACGGAAGCAGTAAGACTATTGAAGGATGAAAAACAAGCTTTTGATATCATTATTACAAATGTTGTGAGATCCGACATGGATGGCTTCACGTTCCTCCAAATTGTTATGAGTCTCAGAATCAACATTCCAGTCGAATTGGAGATGGCAAAAAGGGGCGTAATGGAAGGAGCCGATGCCTATTTACTGAAACCCGTTTGCTTAAGAGAATTGAGGAATCTTTGGCAACACGTTTTGCGAAGAAGATCGTCAAACCCTAATTTCATTGAACAACAACTTCAACCAATTTCTCATACAATGAATAAGGAATTAGATGATGAAATTAACGTTGTTTCATCCTCGACCTCATCGAAGAAGCGTCGAGTGGCTTGGACTAAGATGTTACACGACAAGTTTCTTGCAGCCTATAACCAATTGGGAGAAAAGGGTAACAATGATATATTCTTTATTCATTACTCTTTTTAA

Protein sequence

MEESRQNRDVDRFPIGLRVLAMDANVVCLTYLLHLLHKCHYKGTFYQVLDHFLTSFFQFFKFCVTPKFRFAIYLFFLIIVVTATTEATEAVRLLKDEKQAFDIIITNVVRSDMDGFTFLQIVMSLRINIPVELEMAKRGVMEGADAYLLKPVCLRELRNLWQHVLRRRSSNPNFIEQQLQPISHTMNKELDDEINVVSSSTSSKKRRVAWTKMLHDKFLAAYNQLGEKGNNDIFFIHYSF

Homology

[Close]

BLAST of Sed0016529 vs. NCBI nr
Match: XP_023003850.1 (two-component response regulator ORR24-like [Cucurbita maxima])

HSP 1 Score: 193.7 bits (491), Expect = 1.8e-45
Identity = 122/249 (49.00%), Postives = 151/249 (60.64%), Query Frame = 0


Query: 6   QNRDVDRFPIGLRVLAMDANVVCLTYLLHLLHKCHYKGTFYQVLDHFLTSFFQFFKFCVT 65
           +N   D+FPIGL+VLA+DAN+VCL YL+ LL KC YK                       
Sbjct: 15  ENIQHDQFPIGLKVLAIDANIVCLKYLVQLLQKCQYK----------------------- 74

Query: 66  PKFRFAIYLFFLIIVVTATTEATEAVRLLKDEKQAFDIIITNVVRSDMDGFTFLQIVMSL 125
                          VTATTE TEA+RLL DEK++FDIIITNV R+DMDGF  L+ V   
Sbjct: 75  ---------------VTATTETTEAIRLLNDEKESFDIIITNVGRNDMDGFKILETVRQ- 134

Query: 126 RINIPV-------ELEMAKRGVMEGADAYLLKPVCLRELRNLWQHVLRRR---SSNPNFI 185
            I+IP        +LEM KRGVMEGA+AYLLKPV  +ELRN+WQHVLRRR     NPN +
Sbjct: 135 GIDIPAVMVSANEQLEMVKRGVMEGAEAYLLKPVSFQELRNIWQHVLRRRCRKRPNPNVM 194

Query: 186 EQQLQP----ISH----TMNKE---LDDEINVVSS-----STSSKKRRVAWTKMLHDKFL 229
           EQ+L+     ISH     ++KE   +D  IN+ S+     S+S KK RV+WTK LH++F+
Sbjct: 195 EQELEQHKPIISHERATVIDKEDDAIDKNINIDSNHFDSCSSSKKKPRVSWTKELHERFV 224

[Close]

BLAST of Sed0016529 vs. NCBI nr
Match: KAG6587761.1 (Two-component response regulator ORR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 190.3 bits (482), Expect = 2.0e-44
Identity = 120/251 (47.81%), Postives = 151/251 (60.16%), Query Frame = 0


Query: 6   QNRDVDRFPIGLRVLAMDANVVCLTYLLHLLHKCHYKGTFYQVLDHFLTSFFQFFKFCVT 65
           + +D D+FPIGL+VLA+DAN+VCL YL+ LL KC YK                       
Sbjct: 2   EEKDNDQFPIGLKVLAIDANIVCLKYLVQLLQKCQYK----------------------- 61

Query: 66  PKFRFAIYLFFLIIVVTATTEATEAVRLLKDEKQAFDIIITNVVRSDMDGFTFLQIVMSL 125
                          VTATTE  EA+RLL DEK+AFDIIITNV R DMDGF  L+IV   
Sbjct: 62  ---------------VTATTETAEAIRLLSDEKEAFDIIITNVGRHDMDGFKILEIVRQ- 121

Query: 126 RINIPV-------ELEMAKRGVMEGADAYLLKPVCLRELRNLWQHVLR---RRSSNPNFI 185
            I+IPV       +LEM KRGVMEGA+AYLLKPV  +ELRN+WQHVLR   R+  +PN +
Sbjct: 122 GIDIPVVMVSANEQLEMVKRGVMEGAEAYLLKPVSFQELRNIWQHVLRKRCRKRPSPNVM 181

Query: 186 EQQLQP------ISH----TMNKE---LDDEINVVSS-----STSSKKRRVAWTKMLHDK 229
           EQ+ +       ISH     ++KE   +D  +N+ S+     S+S KK RV+WTK LH++
Sbjct: 182 EQEQEQEQHKPIISHERVTVIDKEDDAIDKNMNIDSNHFDSCSSSKKKPRVSWTKELHER 213

[Close]

BLAST of Sed0016529 vs. NCBI nr
Match: TYK11845.1 (two-component response regulator ARR10-like [Cucumis melo var. makuwa])

HSP 1 Score: 179.1 bits (453), Expect = 4.5e-41
Identity = 117/250 (46.80%), Postives = 147/250 (58.80%), Query Frame = 0


Query: 11  DRFPIGLRVLAMDANVVCLTYLLHLLHKCHYKGTFYQVLDHFLTSFFQFFKFCVTPKFRF 70
           D+FPIGL+VLA+DAN+VCL YL+HLL KC YK                            
Sbjct: 17  DQFPIGLKVLAIDANIVCLRYLVHLLQKCQYK---------------------------- 76

Query: 71  AIYLFFLIIVVTATTEATEAVRLLKDEKQAFDIIITNVVRSDMDGFTFLQIVMSLRINIP 130
                     V+ATT A EA+RLL DEKQ FDI+ITNVVR DMDGF  LQ++  + ++IP
Sbjct: 77  ----------VSATTTAEEAIRLLNDEKQTFDIVITNVVRHDMDGFKILQVI-GVGMDIP 136

Query: 131 V-------ELEMAKRGVMEGADAYLLKPVCLRELRNLWQHVLRRRS----SNPNF----- 190
           V       +L+M KRG+MEGAD YL KPV L++L+N+WQ  LR+RS    SNPN      
Sbjct: 137 VVMISANDDLKMMKRGLMEGADLYLSKPVGLQDLKNIWQLALRKRSSRKRSNPNLSLSEQ 196

Query: 191 --IEQQLQPISH-TMNKE---------LDDE---INVVSSSTSSKKR-RVAWTKMLHDKF 229
             +E+   PI   TMN++         LDD+    N+V SS+ SKKR RV WTK LH KF
Sbjct: 197 PAVEEHRYPIERVTMNQDYVGDHIINKLDDDNDNNNLVDSSSCSKKRPRVNWTKELHAKF 227

[Close]

BLAST of Sed0016529 vs. NCBI nr
Match: KAA0058289.1 (two-component response regulator ARR10-like [Cucumis melo var. makuwa])

HSP 1 Score: 179.1 bits (453), Expect = 4.5e-41
Identity = 117/250 (46.80%), Postives = 147/250 (58.80%), Query Frame = 0


Query: 11  DRFPIGLRVLAMDANVVCLTYLLHLLHKCHYKGTFYQVLDHFLTSFFQFFKFCVTPKFRF 70
           D+FPIGL+VLA+DAN+VCL YL+HLL KC YK                            
Sbjct: 17  DQFPIGLKVLAIDANIVCLRYLVHLLQKCQYK---------------------------- 76

Query: 71  AIYLFFLIIVVTATTEATEAVRLLKDEKQAFDIIITNVVRSDMDGFTFLQIVMSLRINIP 130
                     V+ATT A EA+RLL DEKQ FDI+ITNVVR DMDGF  LQ++  + ++IP
Sbjct: 77  ----------VSATTTAEEAIRLLNDEKQTFDIVITNVVRHDMDGFKILQVI-GVGMDIP 136

Query: 131 V-------ELEMAKRGVMEGADAYLLKPVCLRELRNLWQHVLRRRS----SNPNF----- 190
           V       +L+M KRG+MEGAD YL KPV L++L+N+WQ  LR+RS    SNPN      
Sbjct: 137 VVMISANDDLKMMKRGLMEGADLYLSKPVGLQDLKNIWQLALRKRSSRKRSNPNLSLSEQ 196

Query: 191 --IEQQLQPISH-TMNKE---------LDDE---INVVSSSTSSKKR-RVAWTKMLHDKF 229
             +E+   PI   TMN++         LDD+    N+V SS+ SKKR RV WTK LH KF
Sbjct: 197 PAVEEHRYPIERVTMNQDYVGDHIINKLDDDNDNNNLVDSSSCSKKRPRVNWTKELHAKF 227

[Close]

BLAST of Sed0016529 vs. NCBI nr
Match: KAG7021731.1 (Two-component response regulator ORR24, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 178.7 bits (452), Expect = 5.9e-41
Identity = 115/249 (46.18%), Postives = 148/249 (59.44%), Query Frame = 0


Query: 6   QNRDVDRFPIGLRVLAMDANVVCLTYLLHLLHKCHYKGTFYQVLDHFLTSFFQFFKFCVT 65
           + +D D+FPIGL+VLA+DAN+VCL YL+ LL KC YK                       
Sbjct: 2   EEKDNDQFPIGLKVLAIDANIVCLKYLVQLLQKCQYK----------------------- 61

Query: 66  PKFRFAIYLFFLIIVVTATTEATEAVRLLKDEKQAFDIIITNVVRSDMDGFTFLQIVMSL 125
                          VTATTE  EA+RLL DEK+AFDIIITNV R DMDGF  L+IV   
Sbjct: 62  ---------------VTATTETAEAIRLLNDEKEAFDIIITNVGRHDMDGFKILEIVRQ- 121

Query: 126 RINIPV-------ELEMAKRGVMEGADAYLLKPVCLRELRNLWQHVLR---RRSSNPNFI 185
            I+IPV       +LEM KRGVMEGA+AYLLKPV  +ELRN+WQHVLR   R+  +PN +
Sbjct: 122 GIDIPVVMVSANEQLEMVKRGVMEGAEAYLLKPVSFQELRNIWQHVLRKRCRKRPSPNVM 181

Query: 186 EQQLQP----ISH----TMNKE---LDDEINVVSS-----STSSKKRRVAWTKMLHDKFL 229
           EQ+ +     ISH     ++KE   +D  +N+ S+     S+S KK RV+WTK LH++F+
Sbjct: 182 EQEQEQHKPIISHERVTVIDKEDDAIDKNMNIDSNHFDSCSSSKKKPRVSWTKELHERFV 211

[Close]

BLAST of Sed0016529 vs. ExPASy Swiss-Prot
Match: B8B3I4 (Two-component response regulator ORR22 OS=Oryza sativa subsp. indica OX=39946 GN=RR22 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.9e-24
Identity = 85/270 (31.48%), Postives = 124/270 (45.93%), Query Frame = 0


Query: 1   MEESR--QNRDVDRFPIGLRVLAMDANVVCLTYLLHLLHKCHYKGTFYQVLDHFLTSFFQ 60
           MEE +    R+ D+FP+G+RVLA+D + VCL  L  LL +C Y                 
Sbjct: 8   MEERKGLMGRERDQFPVGMRVLAVDDDPVCLKVLETLLRRCQYH---------------- 67

Query: 61  FFKFCVTPKFRFAIYLFFLIIVVTATTEATEAVRLLKDEKQAFDIIITNVVRSDMDGFTF 120
                                 VT+T +A  A++LL++ +  FD++I++V   DMDGF  
Sbjct: 68  ----------------------VTSTNQAITALKLLRENRDMFDLVISDVHMPDMDGFKL 127

Query: 121 LQIVMSLRINIPV-------ELEMAKRGVMEGADAYLLKPVCLRELRNLWQHVLRRRSSN 180
           L++V  L +++PV       E +   +G+  GA  YLLKPV + ELRN+WQHV+RR+  N
Sbjct: 128 LELV-GLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQHVVRRKFGN 187

Query: 181 --------------PNFIEQQLQPISHT------------MNKEL---------DDEINV 227
                         P   +    P   T              KEL         D++   
Sbjct: 188 RERNNLDFSKECNKPQSADTDHGPYQPTCGSSDQNGRSSRKRKELHGEDDDEGDDNDYQE 238

[Close]

BLAST of Sed0016529 vs. ExPASy Swiss-Prot
Match: Q5SML5 (Two-component response regulator ORR22 OS=Oryza sativa subsp. japonica OX=39947 GN=RR22 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.9e-24
Identity = 85/270 (31.48%), Postives = 124/270 (45.93%), Query Frame = 0


Query: 1   MEESR--QNRDVDRFPIGLRVLAMDANVVCLTYLLHLLHKCHYKGTFYQVLDHFLTSFFQ 60
           MEE +    R+ D+FP+G+RVLA+D + VCL  L  LL +C Y                 
Sbjct: 8   MEERKGLMGRERDQFPVGMRVLAVDDDPVCLKVLETLLRRCQYH---------------- 67

Query: 61  FFKFCVTPKFRFAIYLFFLIIVVTATTEATEAVRLLKDEKQAFDIIITNVVRSDMDGFTF 120
                                 VT+T +A  A++LL++ +  FD++I++V   DMDGF  
Sbjct: 68  ----------------------VTSTNQAITALKLLRENRDMFDLVISDVHMPDMDGFKL 127

Query: 121 LQIVMSLRINIPV-------ELEMAKRGVMEGADAYLLKPVCLRELRNLWQHVLRRRSSN 180
           L++V  L +++PV       E +   +G+  GA  YLLKPV + ELRN+WQHV+RR+  N
Sbjct: 128 LELV-GLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQHVVRRKFGN 187

Query: 181 --------------PNFIEQQLQPISHT------------MNKEL---------DDEINV 227
                         P   +    P   T              KEL         D++   
Sbjct: 188 RERNNLDFSKECNKPQSADTDHGPYQPTCGSSDQNGRSSRKRKELHGEDDDEGDDNDYQE 238

[Close]

BLAST of Sed0016529 vs. ExPASy Swiss-Prot
Match: A2X1N2 (Two-component response regulator ORR24 OS=Oryza sativa subsp. indica OX=39946 GN=RR24 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.6e-23
Identity = 81/251 (32.27%), Postives = 118/251 (47.01%), Query Frame = 0


Query: 11  DRFPIGLRVLAMDANVVCLTYLLHLLHKCHYKGTFYQVLDHFLTSFFQFFKFCVTPKFRF 70
           D+FP+G+RVLA+D +  CL  L +LL +C Y                             
Sbjct: 23  DQFPVGMRVLAVDDDPTCLKILENLLLRCQYH---------------------------- 82

Query: 71  AIYLFFLIIVVTATTEATEAVRLLKDEKQAFDIIITNVVRSDMDGFTFLQIVMSLRINIP 130
                     VT T +A  A++LL++ K  FD++I++V   DMDGF  L++V  L +++P
Sbjct: 83  ----------VTTTGQAATALKLLRENKDQFDLVISDVHMPDMDGFKLLELV-GLEMDLP 142

Query: 131 V-------ELEMAKRGVMEGADAYLLKPVCLRELRNLWQHVLRRRS------SNPNFIEQ 190
           V       E +   +G+  GA  YLLKPV L +LR +WQHV+RR++       N +   Q
Sbjct: 143 VIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQHVIRRKNCDAKNRGNDDDAGQ 202

Query: 191 QLQ-------PISHTMNK---------------ELDDEINVVSSSTSSKKRRVAWTKMLH 227
           + Q        I    NK               + D+  N    S++ KK RV W+  LH
Sbjct: 203 KAQGMNNEGESIGANRNKRQSRKSRDENGDDGDDSDENSNENGDSSTQKKPRVVWSVELH 234

[Close]

BLAST of Sed0016529 vs. ExPASy Swiss-Prot
Match: Q6H805 (Two-component response regulator ORR24 OS=Oryza sativa subsp. japonica OX=39947 GN=RR24 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.6e-23
Identity = 81/251 (32.27%), Postives = 118/251 (47.01%), Query Frame = 0


Query: 11  DRFPIGLRVLAMDANVVCLTYLLHLLHKCHYKGTFYQVLDHFLTSFFQFFKFCVTPKFRF 70
           D+FP+G+RVLA+D +  CL  L +LL +C Y                             
Sbjct: 23  DQFPVGMRVLAVDDDPTCLKILENLLLRCQYH---------------------------- 82

Query: 71  AIYLFFLIIVVTATTEATEAVRLLKDEKQAFDIIITNVVRSDMDGFTFLQIVMSLRINIP 130
                     VT T +A  A++LL++ K  FD++I++V   DMDGF  L++V  L +++P
Sbjct: 83  ----------VTTTGQAATALKLLRENKDQFDLVISDVHMPDMDGFKLLELV-GLEMDLP 142

Query: 131 V-------ELEMAKRGVMEGADAYLLKPVCLRELRNLWQHVLRRRS------SNPNFIEQ 190
           V       E +   +G+  GA  YLLKPV L +LR +WQHV+RR++       N +   Q
Sbjct: 143 VIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQHVIRRKNCDAKNRGNDDDAGQ 202

Query: 191 QLQ-------PISHTMNK---------------ELDDEINVVSSSTSSKKRRVAWTKMLH 227
           + Q        I    NK               + D+  N    S++ KK RV W+  LH
Sbjct: 203 KAQGMNNEGESIGANRNKRQSRKSRDENGDDGDDSDENSNENGDSSTQKKPRVVWSVELH 234

[Close]

BLAST of Sed0016529 vs. ExPASy Swiss-Prot
Match: P62598 (Two-component response regulator ARR12 OS=Arabidopsis thaliana OX=3702 GN=ARR12 PE=2 SV=2)

HSP 1 Score: 110.2 bits (274), Expect = 3.4e-23
Identity = 79/246 (32.11%), Postives = 117/246 (47.56%), Query Frame = 0


Query: 10  VDRFPIGLRVLAMDANVVCLTYLLHLLHKCHYKGTFYQVLDHFLTSFFQFFKFCVTPKFR 69
           +D+FP+G+RVLA+D +  CL  L  LL  C Y                            
Sbjct: 10  LDQFPVGMRVLAVDDDQTCLKILESLLRHCQYH--------------------------- 69

Query: 70  FAIYLFFLIIVVTATTEATEAVRLLKDEKQAFDIIITNVVRSDMDGFTFLQIVMSLRINI 129
                      VT T +A +A+ LL++ K  FD++I++V   DMDGF  L++V  L +++
Sbjct: 70  -----------VTTTNQAQKALELLRENKNKFDLVISDVDMPDMDGFKLLELV-GLEMDL 129

Query: 130 PV-------ELEMAKRGVMEGADAYLLKPVCLRELRNLWQHVLR-----RRSSNPNFIEQ 189
           PV       + +   +GV  GA  YLLKPV + EL+N+WQHV+R      R SN N  ++
Sbjct: 130 PVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVVRSRFDKNRGSNNNGDKR 189

Query: 190 Q-----------------LQPISHTMNKELDDEINVVSSSTSSKKRRVAWTKMLHDKFLA 227
                              +      N++ D++ +    S + KK+RV WT  LH KF+A
Sbjct: 190 DGSGNEGVGNSDQNNGKGNRKRKDQYNEDEDEDRDDNDDSCAQKKQRVVWTVELHKKFVA 216

[Close]

BLAST of Sed0016529 vs. ExPASy TrEMBL
Match: A0A6J1KSY3 (two-component response regulator ORR24-like OS=Cucurbita maxima OX=3661 GN=LOC111497313 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 8.6e-46
Identity = 122/249 (49.00%), Postives = 151/249 (60.64%), Query Frame = 0


Query: 6   QNRDVDRFPIGLRVLAMDANVVCLTYLLHLLHKCHYKGTFYQVLDHFLTSFFQFFKFCVT 65
           +N   D+FPIGL+VLA+DAN+VCL YL+ LL KC YK                       
Sbjct: 15  ENIQHDQFPIGLKVLAIDANIVCLKYLVQLLQKCQYK----------------------- 74

Query: 66  PKFRFAIYLFFLIIVVTATTEATEAVRLLKDEKQAFDIIITNVVRSDMDGFTFLQIVMSL 125
                          VTATTE TEA+RLL DEK++FDIIITNV R+DMDGF  L+ V   
Sbjct: 75  ---------------VTATTETTEAIRLLNDEKESFDIIITNVGRNDMDGFKILETVRQ- 134

Query: 126 RINIPV-------ELEMAKRGVMEGADAYLLKPVCLRELRNLWQHVLRRR---SSNPNFI 185
            I+IP        +LEM KRGVMEGA+AYLLKPV  +ELRN+WQHVLRRR     NPN +
Sbjct: 135 GIDIPAVMVSANEQLEMVKRGVMEGAEAYLLKPVSFQELRNIWQHVLRRRCRKRPNPNVM 194

Query: 186 EQQLQP----ISH----TMNKE---LDDEINVVSS-----STSSKKRRVAWTKMLHDKFL 229
           EQ+L+     ISH     ++KE   +D  IN+ S+     S+S KK RV+WTK LH++F+
Sbjct: 195 EQELEQHKPIISHERATVIDKEDDAIDKNINIDSNHFDSCSSSKKKPRVSWTKELHERFV 224

[Close]

BLAST of Sed0016529 vs. ExPASy TrEMBL
Match: A0A5A7UXN8 (Two-component response regulator ARR10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006220 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 2.2e-41
Identity = 117/250 (46.80%), Postives = 147/250 (58.80%), Query Frame = 0


Query: 11  DRFPIGLRVLAMDANVVCLTYLLHLLHKCHYKGTFYQVLDHFLTSFFQFFKFCVTPKFRF 70
           D+FPIGL+VLA+DAN+VCL YL+HLL KC YK                            
Sbjct: 17  DQFPIGLKVLAIDANIVCLRYLVHLLQKCQYK---------------------------- 76

Query: 71  AIYLFFLIIVVTATTEATEAVRLLKDEKQAFDIIITNVVRSDMDGFTFLQIVMSLRINIP 130
                     V+ATT A EA+RLL DEKQ FDI+ITNVVR DMDGF  LQ++  + ++IP
Sbjct: 77  ----------VSATTTAEEAIRLLNDEKQTFDIVITNVVRHDMDGFKILQVI-GVGMDIP 136

Query: 131 V-------ELEMAKRGVMEGADAYLLKPVCLRELRNLWQHVLRRRS----SNPNF----- 190
           V       +L+M KRG+MEGAD YL KPV L++L+N+WQ  LR+RS    SNPN      
Sbjct: 137 VVMISANDDLKMMKRGLMEGADLYLSKPVGLQDLKNIWQLALRKRSSRKRSNPNLSLSEQ 196

Query: 191 --IEQQLQPISH-TMNKE---------LDDE---INVVSSSTSSKKR-RVAWTKMLHDKF 229
             +E+   PI   TMN++         LDD+    N+V SS+ SKKR RV WTK LH KF
Sbjct: 197 PAVEEHRYPIERVTMNQDYVGDHIINKLDDDNDNNNLVDSSSCSKKRPRVNWTKELHAKF 227

[Close]

BLAST of Sed0016529 vs. ExPASy TrEMBL
Match: A0A5D3CJY2 (Two-component response regulator ARR10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00660 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 2.2e-41
Identity = 117/250 (46.80%), Postives = 147/250 (58.80%), Query Frame = 0


Query: 11  DRFPIGLRVLAMDANVVCLTYLLHLLHKCHYKGTFYQVLDHFLTSFFQFFKFCVTPKFRF 70
           D+FPIGL+VLA+DAN+VCL YL+HLL KC YK                            
Sbjct: 17  DQFPIGLKVLAIDANIVCLRYLVHLLQKCQYK---------------------------- 76

Query: 71  AIYLFFLIIVVTATTEATEAVRLLKDEKQAFDIIITNVVRSDMDGFTFLQIVMSLRINIP 130
                     V+ATT A EA+RLL DEKQ FDI+ITNVVR DMDGF  LQ++  + ++IP
Sbjct: 77  ----------VSATTTAEEAIRLLNDEKQTFDIVITNVVRHDMDGFKILQVI-GVGMDIP 136

Query: 131 V-------ELEMAKRGVMEGADAYLLKPVCLRELRNLWQHVLRRRS----SNPNF----- 190
           V       +L+M KRG+MEGAD YL KPV L++L+N+WQ  LR+RS    SNPN      
Sbjct: 137 VVMISANDDLKMMKRGLMEGADLYLSKPVGLQDLKNIWQLALRKRSSRKRSNPNLSLSEQ 196

Query: 191 --IEQQLQPISH-TMNKE---------LDDE---INVVSSSTSSKKR-RVAWTKMLHDKF 229
             +E+   PI   TMN++         LDD+    N+V SS+ SKKR RV WTK LH KF
Sbjct: 197 PAVEEHRYPIERVTMNQDYVGDHIINKLDDDNDNNNLVDSSSCSKKRPRVNWTKELHAKF 227

[Close]

BLAST of Sed0016529 vs. ExPASy TrEMBL
Match: A0A1S3BWW6 (two-component response regulator ARR10-like OS=Cucumis melo OX=3656 GN=LOC103494353 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.0e-38
Identity = 113/250 (45.20%), Postives = 142/250 (56.80%), Query Frame = 0


Query: 11  DRFPIGLRVLAMDANVVCLTYLLHLLHKCHYKGTFYQVLDHFLTSFFQFFKFCVTPKFRF 70
           D+FPIGL+VLA+DAN+VCL YL+HLL KC YK                            
Sbjct: 17  DQFPIGLKVLAIDANIVCLRYLVHLLQKCQYK---------------------------- 76

Query: 71  AIYLFFLIIVVTATTEATEAVRLLKDEKQAFDIIITNVVRSDMDGFTFLQIVMSLRINIP 130
                           A EA+RLL DEKQ FDI+ITNVVR DMDGF  LQ++  + ++IP
Sbjct: 77  ----------------AEEAIRLLNDEKQTFDIVITNVVRHDMDGFKILQVI-GVGMDIP 136

Query: 131 V-------ELEMAKRGVMEGADAYLLKPVCLRELRNLWQHVLRRRS----SNPNF----- 190
           V       +L+M KRG+MEGAD YL KPV L++L+N+WQ  LR+RS    SNPN      
Sbjct: 137 VVMISANDDLKMMKRGLMEGADLYLSKPVGLQDLKNIWQLALRKRSSRKRSNPNLSLSEQ 196

Query: 191 --IEQQLQPISH-TMNKE---------LDDE---INVVSSSTSSKKR-RVAWTKMLHDKF 229
             +E+   PI   TMN++         LDD+    N+V SS+ SKKR RV WTK LH KF
Sbjct: 197 PAVEEHRYPIERVTMNQDYVGDHIINKLDDDNDNNNLVDSSSCSKKRPRVNWTKELHAKF 221

[Close]

BLAST of Sed0016529 vs. ExPASy TrEMBL
Match: A0A0A0LU42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423030 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 6.6e-38
Identity = 110/253 (43.48%), Postives = 139/253 (54.94%), Query Frame = 0


Query: 11  DRFPIGLRVLAMDANVVCLTYLLHLLHKCHYKGTFYQVLDHFLTSFFQFFKFCVTPKFRF 70
           D+FPIGL+VLA+D ++VCL YL+ LL KC YK                            
Sbjct: 17  DQFPIGLKVLAIDDDIVCLRYLVQLLEKCQYK---------------------------- 76

Query: 71  AIYLFFLIIVVTATTEATEAVRLLKDEKQAFDIIITNVVRSDMDGFTFLQIVMSLRINIP 130
                     V+ATT A EA+RL+ DEKQ FDI+ITNVVR DMDGF  LQI+  + ++IP
Sbjct: 77  ----------VSATTRAEEAIRLINDEKQIFDIVITNVVRHDMDGFEILQII-GVGMDIP 136

Query: 131 V-------ELEMAKRGVMEGADAYLLKPVCLRELRNLWQHVLR----RRSSNPNFI---- 190
           V       +L+M KRG+MEGA+ YL KPV L+EL+N+WQ VLR    R+ SNPN +    
Sbjct: 137 VIMVSANEDLKMMKRGLMEGAELYLPKPVGLQELKNIWQLVLRKRLSRKRSNPNLLLLEQ 196

Query: 191 ---------------EQQLQPISHTMNKELDDEIN-----VVSSSTSSKKRRVAWTKMLH 229
                          +Q+     H +NK  DD  N     V SSS S KK R++WTK LH
Sbjct: 197 PAVEEHRHSLERVTMDQEYYVGDHIVNKLDDDNDNYNNNIVDSSSCSKKKPRISWTKELH 230

[Close]

BLAST of Sed0016529 vs. TAIR 10
Match: AT2G25180.1 (response regulator 12 )

HSP 1 Score: 110.2 bits (274), Expect = 2.4e-24
Identity = 79/246 (32.11%), Postives = 117/246 (47.56%), Query Frame = 0


Query: 10  VDRFPIGLRVLAMDANVVCLTYLLHLLHKCHYKGTFYQVLDHFLTSFFQFFKFCVTPKFR 69
           +D+FP+G+RVLA+D +  CL  L  LL  C Y                            
Sbjct: 10  LDQFPVGMRVLAVDDDQTCLKILESLLRHCQYH--------------------------- 69

Query: 70  FAIYLFFLIIVVTATTEATEAVRLLKDEKQAFDIIITNVVRSDMDGFTFLQIVMSLRINI 129
                      VT T +A +A+ LL++ K  FD++I++V   DMDGF  L++V  L +++
Sbjct: 70  -----------VTTTNQAQKALELLRENKNKFDLVISDVDMPDMDGFKLLELV-GLEMDL 129

Query: 130 PV-------ELEMAKRGVMEGADAYLLKPVCLRELRNLWQHVLR-----RRSSNPNFIEQ 189
           PV       + +   +GV  GA  YLLKPV + EL+N+WQHV+R      R SN N  ++
Sbjct: 130 PVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVVRSRFDKNRGSNNNGDKR 189

Query: 190 Q-----------------LQPISHTMNKELDDEINVVSSSTSSKKRRVAWTKMLHDKFLA 227
                              +      N++ D++ +    S + KK+RV WT  LH KF+A
Sbjct: 190 DGSGNEGVGNSDQNNGKGNRKRKDQYNEDEDEDRDDNDDSCAQKKQRVVWTVELHKKFVA 216

[Close]

BLAST of Sed0016529 vs. TAIR 10
Match: AT4G31920.1 (response regulator 10 )

HSP 1 Score: 109.4 bits (272), Expect = 4.1e-24
Identity = 75/234 (32.05%), Postives = 113/234 (48.29%), Query Frame = 0


Query: 10  VDRFPIGLRVLAMDANVVCLTYLLHLLHKCHYKGTFYQVLDHFLTSFFQFFKFCVTPKFR 69
           +D+FP+G+RVLA+D +  CL  L  LL +C Y                            
Sbjct: 10  LDQFPVGMRVLAVDDDQTCLRILQTLLQRCQYH--------------------------- 69

Query: 70  FAIYLFFLIIVVTATTEATEAVRLLKDEKQAFDIIITNVVRSDMDGFTFLQIVMSLRINI 129
                      VT T +A  A+ LL++ K  FD++I++V   DMDGF  L++V  L +++
Sbjct: 70  -----------VTTTNQAQTALELLRENKNKFDLVISDVDMPDMDGFKLLELV-GLEMDL 129

Query: 130 PV-------ELEMAKRGVMEGADAYLLKPVCLRELRNLWQHVLRR----------RSSNP 189
           PV       + +   +GV  GA  YLLKPV + EL+N+WQHV+R+           + + 
Sbjct: 130 PVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVVRKSKLKKNKSNVSNGSG 189

Query: 190 NFIEQQLQPISHTMNKELDDEINVVSSSTSSKKRRVAWTKMLHDKFLAAYNQLG 227
           N  +   +       +E ++  N     T+ KK RV WT  LH+KFLAA + LG
Sbjct: 190 NCDKANRKRKEQYEEEEEEERGNDNDDPTAQKKPRVLWTHELHNKFLAAVDHLG 204

[Close]

BLAST of Sed0016529 vs. TAIR 10
Match: AT4G16110.1 (response regulator 2 )

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-19
Identity = 76/255 (29.80%), Postives = 107/255 (41.96%), Query Frame = 0


Query: 11  DRFPIGLRVLAMDANVVCLTYLLHLLHKCHYKGTFYQVLDHFLTSFFQFFKFCVTPKFRF 70
           D FP  LRVL +D +  CL  L  +L  C Y+                            
Sbjct: 22  DPFPANLRVLVVDDDPTCLMILERMLMTCLYR---------------------------- 81

Query: 71  AIYLFFLIIVVTATTEATEAVRLLKDEKQAFDIIITNVVRSDMDGFTFLQIVMSLRINIP 130
                     VT    A  A+ LL+  K  FDI+I++V   DMDGF  L+ V  L +++P
Sbjct: 82  ----------VTKCNRAESALSLLRKNKNGFDIVISDVHMPDMDGFKLLEHV-GLEMDLP 141

Query: 131 VELEMAK-------RGVMEGADAYLLKPVCLRELRNLWQHVLRRRSSNPNFIEQQLQPIS 190
           V +  A        +GV  GA  YL+KPV +  L+N+WQHV+R++ +  N  E     I 
Sbjct: 142 VIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIE 201

Query: 191 HT--------------------------------MNKELDDEINVVSSSTSSKKRRVAWT 227
            T                                  +E+DD+ +    S+S KK RV W+
Sbjct: 202 DTGGDRDRQQQHREDADNNSSSVNEGNGRSSRKRKEEEVDDQGDDKEDSSSLKKPRVVWS 237

[Close]

BLAST of Sed0016529 vs. TAIR 10
Match: AT1G67710.1 (response regulator 11 )

HSP 1 Score: 93.6 bits (231), Expect = 2.3e-19
Identity = 76/246 (30.89%), Postives = 108/246 (43.90%), Query Frame = 0


Query: 14  PIGLRVLAMDANVVCLTYLLHLLHKCHYKGTFYQVLDHFLTSFFQFFKFCVTPKFRFAIY 73
           P+GLRVL +D +   L  L  +L KC Y+                               
Sbjct: 8   PVGLRVLVVDDDPTWLKILEKMLKKCSYE------------------------------- 67

Query: 74  LFFLIIVVTATTEATEAVRLLKDEKQAFDIIITNVVRSDMDGFTFLQIVMSLRINIPV-- 133
                  VT    A EA+RLL++ K  +DI+I++V   DMDGF  L+ V  L +++PV  
Sbjct: 68  -------VTTCGLAREALRLLRERKDGYDIVISDVNMPDMDGFKLLEHV-GLELDLPVIM 127

Query: 134 -----ELEMAKRGVMEGADAYLLKPVCLRELRNLWQHVLRR------------------- 193
                E     +GV  GA  YLLKP+ ++EL+ +WQHVLR+                   
Sbjct: 128 MSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVLRKKLQEVRDIEGCGYEGGADW 187

Query: 194 --RSSNPNFIEQQLQPISHTMNKELDDEINVVS-----SSTSSKKRRVAWTKMLHDKFLA 227
             R    +F+            K+ D E  ++      SS+SSKK RV W+  LH KF+ 
Sbjct: 188 ITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLLQDESDPSSSSSKKARVVWSFELHHKFVN 214

[Close]

BLAST of Sed0016529 vs. TAIR 10
Match: AT3G16857.1 (response regulator 1 )

HSP 1 Score: 84.3 bits (207), Expect = 1.4e-16
Identity = 77/269 (28.62%), Postives = 112/269 (41.64%), Query Frame = 0


Query: 10  VDRFPIGLRVLAMDANVVCLTYLLHLLHKCHYKGTFYQVLDHFLTSFFQFFKFCVTPKFR 69
           V+ FP GLRVL +D +  CL  L  +L  C Y+                           
Sbjct: 30  VEMFPSGLRVLVVDDDPTCLMILERMLRTCLYE--------------------------- 89

Query: 70  FAIYLFFLIIVVTATTEATEAVRLLKDEKQAFDIIITNVVRSDMDGFTFLQIVMSLRINI 129
                      VT    A  A+ LL+  K  FDI+I++V   DMDGF  L+ V  L +++
Sbjct: 90  -----------VTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMDGFKLLEHV-GLEMDL 149

Query: 130 PVELEMAK-------RGVMEGADAYLLKPVCLRELRNLWQHVLRRRSSNPNFIEQQLQPI 189
           PV +  A        +GV  GA  YL+KPV +  L+N+WQHV+R+R S  + + +    I
Sbjct: 150 PVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVVRKRRSEWS-VPEHSGSI 209

Query: 190 SHTMNKE-------------------LDDEINVVSSS----TSSKKR------------- 227
             T  ++                   +DD  + V+      +SS+KR             
Sbjct: 210 EETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWRSSSRKRKDEEGEEQGDDKD 258

The following BLAST results are available for this feature:

BLAST of Sed0016529 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023003850.1	1.8e-45	49.00	two-component response regulator ORR24-like [Cucurbita maxima]	[more]
KAG6587761.1	2.0e-44	47.81	Two-component response regulator ORR24, partial [Cucurbita argyrosperma subsp. s...	[more]
TYK11845.1	4.5e-41	46.80	two-component response regulator ARR10-like [Cucumis melo var. makuwa]	[more]
KAA0058289.1	4.5e-41	46.80	two-component response regulator ARR10-like [Cucumis melo var. makuwa]	[more]
KAG7021731.1	5.9e-41	46.18	Two-component response regulator ORR24, partial [Cucurbita argyrosperma subsp. a...	[more]

BLAST of Sed0016529 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8B3I4	8.9e-24	31.48	Two-component response regulator ORR22 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]
Q5SML5	8.9e-24	31.48	Two-component response regulator ORR22 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
A2X1N2	2.6e-23	32.27	Two-component response regulator ORR24 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]
Q6H805	2.6e-23	32.27	Two-component response regulator ORR24 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
P62598	3.4e-23	32.11	Two-component response regulator ARR12 OS=Arabidopsis thaliana OX=3702 GN=ARR12 ...	[more]

BLAST of Sed0016529 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KSY3	8.6e-46	49.00	two-component response regulator ORR24-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A5A7UXN8	2.2e-41	46.80	Two-component response regulator ARR10-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5D3CJY2	2.2e-41	46.80	Two-component response regulator ARR10-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BWW6	1.0e-38	45.20	two-component response regulator ARR10-like OS=Cucumis melo OX=3656 GN=LOC103494...	[more]
A0A0A0LU42	6.6e-38	43.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423030 PE=4 SV=1	[more]

BLAST of Sed0016529 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25180.1	2.4e-24	32.11	response regulator 12	[more]
AT4G31920.1	4.1e-24	32.05	response regulator 10	[more]
AT4G16110.1	1.4e-19	29.80	response regulator 2	[more]
AT1G67710.1	2.3e-19	30.89	response regulator 11	[more]
AT3G16857.1	1.4e-16	28.62	response regulator 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.2300		coord: 17..180 e-value: 3.9E-14 score: 54.6
None	No IPR available	GENE3D	1.10.10.60		coord: 201..232 e-value: 9.2E-6 score: 27.5
None	No IPR available	PANTHER	PTHR43874:SF61	TWO-COMPONENT RESPONSE REGULATOR ORR23	coord: 8..44 coord: 81..226
None	No IPR available	PANTHER	PTHR43874	TWO-COMPONENT RESPONSE REGULATOR	coord: 8..44 coord: 81..226
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 18..165 score: 11.492022
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 81..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016529.1	Sed0016529.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system