Sed0016485 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACAAGACAATGATACAATTACAACAGAGCTTAGTTGAGCTAGAAGCTGAAGCAGAGCGTCTCCTTATAGCCCGCAGTGAGGTAAGCATTAAAAGATTTGAACATTGGCAACATCGCTTTTGAGAGTACTTGTATTTACTCTTCATGATATATATTCGCTTTTATTGAAATGAATTGTCGTAATTTTTCTATGATTGTAATGAAATGGTTCTGTAACTTTGGGAAGTGATAAGGTGAACTGACCGCTGTTGTTTGTATTAAATGCCAGTTGGTTGAAAATGATAGAGTGAGAAATGGGAATAGAGAAGCGTTGACTGCTTTGAGGAAGCGAGCACGGACAACAAAATCCAGTGTTCCGTCACCTTTTGAGTCAATTATGAAGGAGATGGCGGGTTCTGCATCAAGGCCATTGGTGAAGGAGATTTGCACTACCTGCGGGAACCATGACTCTAATGAGCGGACATGGATGATGTTCCCAGGAACTGATGTTTTCGCCAGGGTTCCATTTCATGCTGCTCATTCAATCTTGGAGACAGACCAGTCGAAACTTGATTTTGAGGCAAAGAAATTACAGAGTTTTGTCAAAGACCAATCCCTTGTGATTTCGGAAAAAGGAGCCCTCGCCGACAAGATCAGTCCAGGAGTGCTCAAGGCATTAGTGACATTGACAGATAAACCAAAATGA ATGAACAAGACAATGATACAATTACAACAGAGCTTAGTTGAGCTAGAAGCTGAAGCAGAGCGTCTCCTTATAGCCCGCAGTGAGTTGGTTGAAAATGATAGAGTGAGAAATGGGAATAGAGAAGCGTTGACTGCTTTGAGGAAGCGAGCACGGACAACAAAATCCAGTGTTCCGTCACCTTTTGAGTCAATTATGAAGGAGATGGCGGGTTCTGCATCAAGGCCATTGGTGAAGGAGATTTGCACTACCTGCGGGAACCATGACTCTAATGAGCGGACATGGATGATGTTCCCAGGAACTGATGTTTTCGCCAGGGTTCCATTTCATGCTGCTCATTCAATCTTGGAGACAGACCAGTCGAAACTTGATTTTGAGGCAAAGAAATTACAGAGTTTTGTCAAAGACCAATCCCTTGTGATTTCGGAAAAAGGAGCCCTCGCCGACAAGATCAGTCCAGGAGTGCTCAAGGCATTAGTGACATTGACAGATAAACCAAAATGA ATGAACAAGACAATGATACAATTACAACAGAGCTTAGTTGAGCTAGAAGCTGAAGCAGAGCGTCTCCTTATAGCCCGCAGTGAGTTGGTTGAAAATGATAGAGTGAGAAATGGGAATAGAGAAGCGTTGACTGCTTTGAGGAAGCGAGCACGGACAACAAAATCCAGTGTTCCGTCACCTTTTGAGTCAATTATGAAGGAGATGGCGGGTTCTGCATCAAGGCCATTGGTGAAGGAGATTTGCACTACCTGCGGGAACCATGACTCTAATGAGCGGACATGGATGATGTTCCCAGGAACTGATGTTTTCGCCAGGGTTCCATTTCATGCTGCTCATTCAATCTTGGAGACAGACCAGTCGAAACTTGATTTTGAGGCAAAGAAATTACAGAGTTTTGTCAAAGACCAATCCCTTGTGATTTCGGAAAAAGGAGCCCTCGCCGACAAGATCAGTCCAGGAGTGCTCAAGGCATTAGTGACATTGACAGATAAACCAAAATGA MNKTMIQLQQSLVELEAEAERLLIARSELVENDRVRNGNREALTALRKRARTTKSSVPSPFESIMKEMAGSASRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHSILETDQSKLDFEAKKLQSFVKDQSLVISEKGALADKISPGVLKALVTLTDKPK Homology
BLAST of Sed0016485 vs. NCBI nr
Match: XP_022944864.1 (uncharacterized protein LOC111449262 isoform X1 [Cucurbita moschata]) HSP 1 Score: 302.0 bits (772), Expect = 3.2e-78 Identity = 154/166 (92.77%), Postives = 162/166 (97.59%), Query Frame = 0
BLAST of Sed0016485 vs. NCBI nr
Match: XP_023538656.1 (uncharacterized protein LOC111799532 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 301.6 bits (771), Expect = 4.2e-78 Identity = 154/166 (92.77%), Postives = 162/166 (97.59%), Query Frame = 0
BLAST of Sed0016485 vs. NCBI nr
Match: XP_022974246.1 (uncharacterized protein LOC111472882 isoform X1 [Cucurbita maxima]) HSP 1 Score: 301.6 bits (771), Expect = 4.2e-78 Identity = 154/166 (92.77%), Postives = 161/166 (96.99%), Query Frame = 0
BLAST of Sed0016485 vs. NCBI nr
Match: KAG7028508.1 (hypothetical protein SDJN02_09689, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 300.4 bits (768), Expect = 9.3e-78 Identity = 153/166 (92.17%), Postives = 162/166 (97.59%), Query Frame = 0
BLAST of Sed0016485 vs. NCBI nr
Match: KAG6582715.1 (hypothetical protein SDJN03_22717, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020691.1 hypothetical protein SDJN02_17378 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 298.9 bits (764), Expect = 2.7e-77 Identity = 152/166 (91.57%), Postives = 162/166 (97.59%), Query Frame = 0
BLAST of Sed0016485 vs. ExPASy TrEMBL
Match: A0A6J1FZC5 (p53 and DNA damage-regulated protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111449262 PE=4 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 1.6e-78 Identity = 154/166 (92.77%), Postives = 162/166 (97.59%), Query Frame = 0
BLAST of Sed0016485 vs. ExPASy TrEMBL
Match: A0A6J1IAT9 (p53 and DNA damage-regulated protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111472882 PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 2.0e-78 Identity = 154/166 (92.77%), Postives = 161/166 (96.99%), Query Frame = 0
BLAST of Sed0016485 vs. ExPASy TrEMBL
Match: A0A6J1E8S8 (p53 and DNA damage-regulated protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111431844 PE=4 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 2.9e-77 Identity = 151/166 (90.96%), Postives = 162/166 (97.59%), Query Frame = 0
BLAST of Sed0016485 vs. ExPASy TrEMBL
Match: A0A0A0L6Z1 (p53 and DNA damage-regulated protein 1 OS=Cucumis sativus OX=3659 GN=Csa_3G117970 PE=4 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 1.1e-76 Identity = 150/166 (90.36%), Postives = 161/166 (96.99%), Query Frame = 0
BLAST of Sed0016485 vs. ExPASy TrEMBL
Match: A0A6J1D9S7 (p53 and DNA damage-regulated protein 1 OS=Momordica charantia OX=3673 GN=LOC111018534 PE=4 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 1.9e-76 Identity = 151/165 (91.52%), Postives = 160/165 (96.97%), Query Frame = 0
BLAST of Sed0016485 vs. TAIR 10
Match: AT3G15351.1 (unknown protein; Has 50 Blast hits to 50 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 209.9 bits (533), Expect = 1.5e-54 Identity = 99/154 (64.29%), Postives = 134/154 (87.01%), Query Frame = 0
BLAST of Sed0016485 vs. TAIR 10
Match: AT3G15351.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 43 Blast hits to 43 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 195.7 bits (496), Expect = 3.0e-50 Identity = 91/137 (66.42%), Postives = 120/137 (87.59%), Query Frame = 0
BLAST of Sed0016485 vs. TAIR 10
Match: AT3G15351.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 150.2 bits (378), Expect = 1.5e-36 Identity = 68/105 (64.76%), Postives = 93/105 (88.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|