Homology
BLAST of Sed0016377 vs. NCBI nr
Match:
KAG7025166.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1276.9 bits (3303), Expect = 0.0e+00
Identity = 621/713 (87.10%), Postives = 667/713 (93.55%), Query Frame = 0
Query: 1 MPSSSSQYILRSISMYKLKPFIPKQWDNVPMAMVASEFMIDSIFSSLKNFASHGQLSKAF 60
M SSS +YILR +S+YKL FIPKQW NVP++ EFMI SIF SLK+FASHGQLSKAF
Sbjct: 1 MSSSSPEYILRGLSIYKLLTFIPKQWKNVPVSN-GREFMITSIFDSLKSFASHGQLSKAF 60
Query: 61 EAFSFIQLRTCYNDSFDLILQSISILLVSCNNCSSLPPGKQLHGRIISSGLEQDFILVPK 120
EAFS +QLR+ YNDSFDLI+QSISILLVSC CSSLP GKQLHGRII SGLE+D ILVPK
Sbjct: 61 EAFSLVQLRSSYNDSFDLIVQSISILLVSCTTCSSLPSGKQLHGRIILSGLEEDSILVPK 120
Query: 121 LVTFYSSFKLLAEAHTLVENSNLFHPCSWNLLITSYVRNELHEAAILAYKQMLSKGVLPD 180
LVTFYSSFKLLAEAHTLVENSNLFHPC WNLLITSYVRNELHE+AILAYKQMLSKGV PD
Sbjct: 121 LVTFYSSFKLLAEAHTLVENSNLFHPCPWNLLITSYVRNELHESAILAYKQMLSKGVRPD 180
Query: 181 NFTFPSILKACGETQNLGFGLEVHKSINAWSNKWSLFVQNALISMYGRCGEVDMARNLFD 240
NFTFPSILKACGETQNLGFGLEVHK IN+WSN+WSLFVQNALISMYGRCGE+D ARNLFD
Sbjct: 181 NFTFPSILKACGETQNLGFGLEVHKCINSWSNQWSLFVQNALISMYGRCGELDTARNLFD 240
Query: 241 NMLDRDAVSWNSMISCYASKSMWKEAFELFDSMQIKCVEINIVTWNIVAGGCLRVGNFTR 300
NMLDRDAVSWNSMISCYASK MWKEAFELFD MQ KC+EINIVTWNI+AGGCLR+G FTR
Sbjct: 241 NMLDRDAVSWNSMISCYASKGMWKEAFELFDIMQSKCLEINIVTWNIIAGGCLRLGKFTR 300
Query: 301 TLKLLSQMRHFGVHLDNVAMLIGLGACSHIGAIRLGKEIHGFTIRHCYHKLSNVQNALVT 360
LKLLSQMR+FG+HLD+VAM+IGLGACSHIGAIRLGKEIHGFTIRHCYHK S VQNAL+T
Sbjct: 301 ALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHKSSTVQNALLT 360
Query: 361 MYARCKDLTRAYSLFRLNDDRSIITWNSMLSGLAHLDRVEEALFLFRELLLFGLEPNYVT 420
MYARCKD+TRAY LFR+NDD+SIITWNSMLSGL+H+DRVE+AL LFRELLLFG+EPNYVT
Sbjct: 361 MYARCKDITRAYILFRINDDKSIITWNSMLSGLSHVDRVEDALRLFRELLLFGVEPNYVT 420
Query: 421 FASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLEAKRVFDSL 480
FASILPLCARVADLQHGREFHCYITKR+DF+DYLLLWNALVDMYARSGKVLEAKRVFDSL
Sbjct: 421 FASILPLCARVADLQHGREFHCYITKRQDFQDYLLLWNALVDMYARSGKVLEAKRVFDSL 480
Query: 481 NKKDEVTYTSLIAGYGMQGEGSKALRLFKEMKELRIKPDHITMVAVLSACSHSGLVKPGE 540
+KKDEVTYTSLIAGYGMQGEG KALRLF+EMK + IKPDHITMVAVLSACSHSGLVK GE
Sbjct: 481 SKKDEVTYTSLIAGYGMQGEGRKALRLFEEMKSVDIKPDHITMVAVLSACSHSGLVKQGE 540
Query: 541 LLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITSMPYRPTTAMWATLIGACCI 600
+LFAEMQSVHGLSPRLEHYACMADLFGRVGLL++AKEIIT MPYRPT+AMWATLIGACCI
Sbjct: 541 VLFAEMQSVHGLSPRLEHYACMADLFGRVGLLDRAKEIITRMPYRPTSAMWATLIGACCI 600
Query: 601 HENTDIGKWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSELAKIRTLMRDSGVAKAPGCS 660
H NTDIG+WAAEKLLEM+PEHSGYYVLIANMYAAAGSWS+LAKIRTLMRD GVAKAPGCS
Sbjct: 601 HRNTDIGEWAAEKLLEMKPEHSGYYVLIANMYAAAGSWSKLAKIRTLMRDYGVAKAPGCS 660
Query: 661 WIDIGSGFVSFLVGDTSNPRALASKHLLDSLNDVMKHGSLVTTDYCDIDDDIF 714
W+++GS FVSFLVGDTSNP+AL SKHLLD LNDVMKHG+LV TD DI DDIF
Sbjct: 661 WVEVGSEFVSFLVGDTSNPQALESKHLLDGLNDVMKHGTLVMTDDYDIGDDIF 712
BLAST of Sed0016377 vs. NCBI nr
Match:
XP_022973516.1 (pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita maxima] >XP_022973518.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita maxima] >XP_022973519.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita maxima] >XP_022973520.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita maxima])
HSP 1 Score: 1270.4 bits (3286), Expect = 0.0e+00
Identity = 617/713 (86.54%), Postives = 665/713 (93.27%), Query Frame = 0
Query: 1 MPSSSSQYILRSISMYKLKPFIPKQWDNVPMAMVASEFMIDSIFSSLKNFASHGQLSKAF 60
M SSS +YILR +S+YKL FIPKQW NVP++ EFMI+SIF SLK+FASHGQLSKAF
Sbjct: 1 MSSSSPEYILRGLSIYKLLTFIPKQWKNVPVSN-GREFMINSIFYSLKSFASHGQLSKAF 60
Query: 61 EAFSFIQLRTCYNDSFDLILQSISILLVSCNNCSSLPPGKQLHGRIISSGLEQDFILVPK 120
EAFS +QLR YNDSFDLI+QSISILLVSC CSSLP GKQLHGRIISSGLE+D ILVPK
Sbjct: 61 EAFSLVQLRRSYNDSFDLIVQSISILLVSCTTCSSLPSGKQLHGRIISSGLEEDSILVPK 120
Query: 121 LVTFYSSFKLLAEAHTLVENSNLFHPCSWNLLITSYVRNELHEAAILAYKQMLSKGVLPD 180
LVTFYSSFKLLAEAHTLVENSNLFHPC WNLLITSYVRNELHE+AILAYKQMLSKGV PD
Sbjct: 121 LVTFYSSFKLLAEAHTLVENSNLFHPCPWNLLITSYVRNELHESAILAYKQMLSKGVRPD 180
Query: 181 NFTFPSILKACGETQNLGFGLEVHKSINAWSNKWSLFVQNALISMYGRCGEVDMARNLFD 240
NFTFPSILKACGETQNLGFGLEVHK IN+WSN+WSLFVQNALISMYGRCGE+D ARNLFD
Sbjct: 181 NFTFPSILKACGETQNLGFGLEVHKCINSWSNQWSLFVQNALISMYGRCGELDTARNLFD 240
Query: 241 NMLDRDAVSWNSMISCYASKSMWKEAFELFDSMQIKCVEINIVTWNIVAGGCLRVGNFTR 300
NMLDRDAVSWNSMISCYASK MWKEAFELFD MQ KC+EINIVTWNI+AGGCLR+G FTR
Sbjct: 241 NMLDRDAVSWNSMISCYASKGMWKEAFELFDIMQSKCLEINIVTWNIIAGGCLRLGKFTR 300
Query: 301 TLKLLSQMRHFGVHLDNVAMLIGLGACSHIGAIRLGKEIHGFTIRHCYHKLSNVQNALVT 360
LKLLSQMR+FG+HLD+VAM+IGLGACSHIGAIRLGKEIHGFTIRHCYHK S VQNAL+T
Sbjct: 301 ALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHKSSTVQNALLT 360
Query: 361 MYARCKDLTRAYSLFRLNDDRSIITWNSMLSGLAHLDRVEEALFLFRELLLFGLEPNYVT 420
MYARCKD+ RAY LFRLNDD+SIITWNSMLSGL+H+DRVE+AL LFRE LLFG+EPNYVT
Sbjct: 361 MYARCKDIMRAYILFRLNDDKSIITWNSMLSGLSHVDRVEDALRLFREFLLFGVEPNYVT 420
Query: 421 FASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLEAKRVFDSL 480
FASILPLCARVADLQHGREFHCYITKR+DF+DYLLLWNALVDMYARSGKV+EAKRVFDSL
Sbjct: 421 FASILPLCARVADLQHGREFHCYITKRQDFQDYLLLWNALVDMYARSGKVIEAKRVFDSL 480
Query: 481 NKKDEVTYTSLIAGYGMQGEGSKALRLFKEMKELRIKPDHITMVAVLSACSHSGLVKPGE 540
+KKDEVTYTSLIAGYGMQGEG KALRLF+EMK + IKPDHITMVAVLSACSHSGLVK GE
Sbjct: 481 SKKDEVTYTSLIAGYGMQGEGRKALRLFEEMKSVDIKPDHITMVAVLSACSHSGLVKQGE 540
Query: 541 LLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITSMPYRPTTAMWATLIGACCI 600
+LFAEMQSVHGLSP LEHYACMADLFGRVGLL++AKEIIT MPYRPT+AMWATLIGACCI
Sbjct: 541 VLFAEMQSVHGLSPHLEHYACMADLFGRVGLLDRAKEIITRMPYRPTSAMWATLIGACCI 600
Query: 601 HENTDIGKWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSELAKIRTLMRDSGVAKAPGCS 660
H NTDIG+WAAEKLLEM+PEHSGYYVLIANMYAAAGSWS+LAKIRTLMRD GVAKAPGCS
Sbjct: 601 HRNTDIGEWAAEKLLEMKPEHSGYYVLIANMYAAAGSWSKLAKIRTLMRDYGVAKAPGCS 660
Query: 661 WIDIGSGFVSFLVGDTSNPRALASKHLLDSLNDVMKHGSLVTTDYCDIDDDIF 714
W+++GS FVSFLVGDTSNP+AL SKHLLD LNDVMKHG+LV TD DI +D+F
Sbjct: 661 WVEVGSEFVSFLVGDTSNPQALESKHLLDDLNDVMKHGTLVMTDDYDIGNDVF 712
BLAST of Sed0016377 vs. NCBI nr
Match:
XP_022925519.1 (pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita moschata] >XP_022925520.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita moschata] >XP_022925521.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita moschata] >XP_022925522.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita moschata])
HSP 1 Score: 1269.6 bits (3284), Expect = 0.0e+00
Identity = 618/713 (86.68%), Postives = 664/713 (93.13%), Query Frame = 0
Query: 1 MPSSSSQYILRSISMYKLKPFIPKQWDNVPMAMVASEFMIDSIFSSLKNFASHGQLSKAF 60
M SSS +YILR +S+YKL FIPKQW NVP++ EFMI SIF SLK+FASHGQLSKAF
Sbjct: 1 MSSSSPEYILRGLSIYKLLTFIPKQWKNVPVSN-GREFMITSIFDSLKSFASHGQLSKAF 60
Query: 61 EAFSFIQLRTCYNDSFDLILQSISILLVSCNNCSSLPPGKQLHGRIISSGLEQDFILVPK 120
EAFS +QLR YNDSFDLI+QSISILLVSC CSSLP GKQLHGRIISSGLE+D ILVPK
Sbjct: 61 EAFSLVQLRGSYNDSFDLIVQSISILLVSCTTCSSLPSGKQLHGRIISSGLEEDSILVPK 120
Query: 121 LVTFYSSFKLLAEAHTLVENSNLFHPCSWNLLITSYVRNELHEAAILAYKQMLSKGVLPD 180
LVTFYSSFKLLAEAHTLVENSNLFHPC WNLLITSYVRNELHE+AILAYKQMLSKGV PD
Sbjct: 121 LVTFYSSFKLLAEAHTLVENSNLFHPCPWNLLITSYVRNELHESAILAYKQMLSKGVRPD 180
Query: 181 NFTFPSILKACGETQNLGFGLEVHKSINAWSNKWSLFVQNALISMYGRCGEVDMARNLFD 240
NFTFPSILKACGETQNLGFGLEVHK IN+WSN+WSLFVQNALISMYGRCGE+D ARNLFD
Sbjct: 181 NFTFPSILKACGETQNLGFGLEVHKCINSWSNQWSLFVQNALISMYGRCGELDTARNLFD 240
Query: 241 NMLDRDAVSWNSMISCYASKSMWKEAFELFDSMQIKCVEINIVTWNIVAGGCLRVGNFTR 300
NMLDRDAVSWNSMISCYAS MWKEAFELFD MQ KC+EINIVTWNI+AGGCLR+G FT+
Sbjct: 241 NMLDRDAVSWNSMISCYASNGMWKEAFELFDIMQSKCLEINIVTWNIIAGGCLRLGKFTQ 300
Query: 301 TLKLLSQMRHFGVHLDNVAMLIGLGACSHIGAIRLGKEIHGFTIRHCYHKLSNVQNALVT 360
LKLLSQMR+FG+HLD+VAM+IGLGACSHIGAIRLGKEIHGFTIRHCYHK S VQNAL+T
Sbjct: 301 ALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHKSSTVQNALLT 360
Query: 361 MYARCKDLTRAYSLFRLNDDRSIITWNSMLSGLAHLDRVEEALFLFRELLLFGLEPNYVT 420
MYARCKD+ RAY LFRLNDD+SIITWNSMLSGL+H+DRVE+AL LFRELLL+G+EPNYVT
Sbjct: 361 MYARCKDIMRAYILFRLNDDKSIITWNSMLSGLSHVDRVEDALRLFRELLLYGVEPNYVT 420
Query: 421 FASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLEAKRVFDSL 480
FASILPLCARVADLQHGREFHCYITKR+DF+DYLLLWNALVDMYARSGKVLEAKRVFDSL
Sbjct: 421 FASILPLCARVADLQHGREFHCYITKRQDFQDYLLLWNALVDMYARSGKVLEAKRVFDSL 480
Query: 481 NKKDEVTYTSLIAGYGMQGEGSKALRLFKEMKELRIKPDHITMVAVLSACSHSGLVKPGE 540
+KKDEVTYTSLIAGYGMQGEG KALRLF+EMK + IKPDHITMVAVLSACSHSGLVK GE
Sbjct: 481 SKKDEVTYTSLIAGYGMQGEGRKALRLFEEMKSVDIKPDHITMVAVLSACSHSGLVKQGE 540
Query: 541 LLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITSMPYRPTTAMWATLIGACCI 600
+LFAEMQSVHGLSPRLEHYACMADLFGRVGLL++AKEIIT MPYRPT+AMWATLIGACCI
Sbjct: 541 VLFAEMQSVHGLSPRLEHYACMADLFGRVGLLDRAKEIITRMPYRPTSAMWATLIGACCI 600
Query: 601 HENTDIGKWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSELAKIRTLMRDSGVAKAPGCS 660
H NTDIG+WAAEKLLEM+PEHSGYYVLIANMYAAAGSWS+LAKIRTLMRD GVAKAPGCS
Sbjct: 601 HRNTDIGEWAAEKLLEMKPEHSGYYVLIANMYAAAGSWSKLAKIRTLMRDYGVAKAPGCS 660
Query: 661 WIDIGSGFVSFLVGDTSNPRALASKHLLDSLNDVMKHGSLVTTDYCDIDDDIF 714
W+++GS FVSFLVGDTSNP+AL SKHLLD LNDVMKHG+LV D DI DDIF
Sbjct: 661 WVEVGSEFVSFLVGDTSNPQALESKHLLDGLNDVMKHGTLVMIDDYDIGDDIF 712
BLAST of Sed0016377 vs. NCBI nr
Match:
XP_023535485.1 (pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023535486.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023535487.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1266.9 bits (3277), Expect = 0.0e+00
Identity = 618/713 (86.68%), Postives = 665/713 (93.27%), Query Frame = 0
Query: 1 MPSSSSQYILRSISMYKLKPFIPKQWDNVPMAMVASEFMIDSIFSSLKNFASHGQLSKAF 60
M SSS +YILR +S+YKL F+PKQW NV ++ EFMI+SIF SLK+FASHGQLSKAF
Sbjct: 1 MSSSSPEYILRGLSIYKLLTFLPKQWKNVHVSN-GREFMINSIFDSLKSFASHGQLSKAF 60
Query: 61 EAFSFIQLRTCYNDSFDLILQSISILLVSCNNCSSLPPGKQLHGRIISSGLEQDFILVPK 120
EAFS +QLR YNDSFDLI+QSISILLVSC CSSLP GKQLHG IISSGLE+D ILVPK
Sbjct: 61 EAFSLVQLRRSYNDSFDLIVQSISILLVSCTTCSSLPSGKQLHGCIISSGLEEDSILVPK 120
Query: 121 LVTFYSSFKLLAEAHTLVENSNLFHPCSWNLLITSYVRNELHEAAILAYKQMLSKGVLPD 180
LVTFYSSFKLLAEAHTLVENSNLFHPC WNLLITSYVRNELHE+AILAYKQMLSKGV PD
Sbjct: 121 LVTFYSSFKLLAEAHTLVENSNLFHPCPWNLLITSYVRNELHESAILAYKQMLSKGVRPD 180
Query: 181 NFTFPSILKACGETQNLGFGLEVHKSINAWSNKWSLFVQNALISMYGRCGEVDMARNLFD 240
NFTFPSILKACGETQNLGFGLEVHK IN+WSN+WSLFVQNALISMYGRCGE+D ARNLFD
Sbjct: 181 NFTFPSILKACGETQNLGFGLEVHKCINSWSNQWSLFVQNALISMYGRCGELDTARNLFD 240
Query: 241 NMLDRDAVSWNSMISCYASKSMWKEAFELFDSMQIKCVEINIVTWNIVAGGCLRVGNFTR 300
NMLDRDAVSWNSMISCYASK MWKEAFELFD MQ KC+EINIVTWNI+AGGCLR+G FT+
Sbjct: 241 NMLDRDAVSWNSMISCYASKGMWKEAFELFDIMQSKCLEINIVTWNIIAGGCLRLGKFTQ 300
Query: 301 TLKLLSQMRHFGVHLDNVAMLIGLGACSHIGAIRLGKEIHGFTIRHCYHKLSNVQNALVT 360
LKLLSQMR+FG+HLD+VAM+IGLGACSHIGAIRLGKEIHGFTIRHCYHK S VQNAL+T
Sbjct: 301 ALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHKSSTVQNALLT 360
Query: 361 MYARCKDLTRAYSLFRLNDDRSIITWNSMLSGLAHLDRVEEALFLFRELLLFGLEPNYVT 420
MYARCKD+TRAY LFRLNDD+SIITWNSMLSGL+H+DRVE+AL LFRELLLFG+EPNYVT
Sbjct: 361 MYARCKDITRAYILFRLNDDKSIITWNSMLSGLSHVDRVEDALRLFRELLLFGVEPNYVT 420
Query: 421 FASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLEAKRVFDSL 480
ASILPLCARVADLQHGREFHCYITKR+DFRDYLLLWNALVDMYARSGKV+EAKRVFDSL
Sbjct: 421 CASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWNALVDMYARSGKVIEAKRVFDSL 480
Query: 481 NKKDEVTYTSLIAGYGMQGEGSKALRLFKEMKELRIKPDHITMVAVLSACSHSGLVKPGE 540
+KKDEVTYTSLIAGYGMQGEG KALRLF+EMK + IKPDHITMVAVLSACSHSGLVK GE
Sbjct: 481 SKKDEVTYTSLIAGYGMQGEGRKALRLFEEMKSVDIKPDHITMVAVLSACSHSGLVKQGE 540
Query: 541 LLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITSMPYRPTTAMWATLIGACCI 600
+LFAEMQSVHGLSPRLEHYACMADLFGRVGLL++AKEIIT MP RPT+AMWATLIGACCI
Sbjct: 541 VLFAEMQSVHGLSPRLEHYACMADLFGRVGLLDRAKEIITRMPCRPTSAMWATLIGACCI 600
Query: 601 HENTDIGKWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSELAKIRTLMRDSGVAKAPGCS 660
H NTDIG+WAAEKLLEM+PEHSGYYVLIANMYAAAGSWS+LAKIRTLMRD GVAKAPGCS
Sbjct: 601 HRNTDIGEWAAEKLLEMKPEHSGYYVLIANMYAAAGSWSKLAKIRTLMRDYGVAKAPGCS 660
Query: 661 WIDIGSGFVSFLVGDTSNPRALASKHLLDSLNDVMKHGSLVTTDYCDIDDDIF 714
W+++GS FVSFLVGDTSNP+AL SKHLLDSLNDVMKHG+LV TD DI DDIF
Sbjct: 661 WVEVGSEFVSFLVGDTSNPQALESKHLLDSLNDVMKHGTLVMTDDYDIGDDIF 712
BLAST of Sed0016377 vs. NCBI nr
Match:
XP_022141804.1 (pentatricopeptide repeat-containing protein At1g71490-like [Momordica charantia] >XP_022141805.1 pentatricopeptide repeat-containing protein At1g71490-like [Momordica charantia])
HSP 1 Score: 1259.2 bits (3257), Expect = 0.0e+00
Identity = 618/713 (86.68%), Postives = 655/713 (91.87%), Query Frame = 0
Query: 1 MPSSSSQYILRSISMYKLKPFIPKQWDNVPMAMVASEFMIDSIFSSLKNFASHGQLSKAF 60
M SSSSQYI R +S+YKL+ FIPKQW N P++ SEFMI +FSSLK+FA HGQLSKAF
Sbjct: 1 MSSSSSQYIFRGLSLYKLQTFIPKQWKNKPVSN-GSEFMIGPVFSSLKSFACHGQLSKAF 60
Query: 61 EAFSFIQLRTCYNDSFDLILQSISILLVSCNNCSSLPPGKQLHGRIISSGLEQDFILVPK 120
EAFS IQLRT YNDSFDLILQS SILLVSC N SSLPPG+QLHGRII SGLEQD ILVPK
Sbjct: 61 EAFSLIQLRTGYNDSFDLILQSFSILLVSCTNASSLPPGRQLHGRIILSGLEQDSILVPK 120
Query: 121 LVTFYSSFKLLAEAHTLVENSNLFHPCSWNLLITSYVRNELHEAAILAYKQMLSKGVLPD 180
LVTFYSSFKLLAEAHTLVENSN+FHPC WNLLITSYVRN LHEAAIL YKQMLS+G+ PD
Sbjct: 121 LVTFYSSFKLLAEAHTLVENSNIFHPCPWNLLITSYVRNGLHEAAILVYKQMLSRGIRPD 180
Query: 181 NFTFPSILKACGETQNLGFGLEVHKSINAWSNKWSLFVQNALISMYGRCGEVDMARNLFD 240
NFTFPSILKACGETQNLGFGLEVHK INAWS +WSLFVQNALISMYGRCGEVD ARNLFD
Sbjct: 181 NFTFPSILKACGETQNLGFGLEVHKYINAWSTEWSLFVQNALISMYGRCGEVDTARNLFD 240
Query: 241 NMLDRDAVSWNSMISCYASKSMWKEAFELFDSMQIKCVEINIVTWNIVAGGCLRVGNFTR 300
NMLDRDAVSWNSMISCYASK MWKEAFELFD+MQ KC+EINIVTWNI+AGGCLRVGNF
Sbjct: 241 NMLDRDAVSWNSMISCYASKGMWKEAFELFDNMQSKCIEINIVTWNIIAGGCLRVGNFVG 300
Query: 301 TLKLLSQMRHFGVHLDNVAMLIGLGACSHIGAIRLGKEIHGFTIRHCYHKLSNVQNALVT 360
LKLLSQMR+FG HLD VAM+IGLGACSHIGAIRLGKEIHGFTIRHCYH+LS VQNALVT
Sbjct: 301 ALKLLSQMRNFGAHLDYVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHRLSIVQNALVT 360
Query: 361 MYARCKDLTRAYSLFRLNDDRSIITWNSMLSGLAHLDRVEEALFLFRELLLFGLEPNYVT 420
MYARCKD+ AY LFRLN D+SIITWNSMLSG HLDRVEEALFLFRELLL G+EPNYVT
Sbjct: 361 MYARCKDIMNAYILFRLNSDKSIITWNSMLSGYTHLDRVEEALFLFRELLLSGVEPNYVT 420
Query: 421 FASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLEAKRVFDSL 480
ASILPLCARVADLQHGREFHCYITKRED DYLLLWNALVDMYARSGKVLEAKRVFDSL
Sbjct: 421 IASILPLCARVADLQHGREFHCYITKREDLGDYLLLWNALVDMYARSGKVLEAKRVFDSL 480
Query: 481 NKKDEVTYTSLIAGYGMQGEGSKALRLFKEMKELRIKPDHITMVAVLSACSHSGLVKPGE 540
+KKDEVTYTSLIAGYGMQGEGSKALRLF+EMK +IKPDHITMVAVLSACSHSGL+K GE
Sbjct: 481 SKKDEVTYTSLIAGYGMQGEGSKALRLFQEMKRFQIKPDHITMVAVLSACSHSGLLKQGE 540
Query: 541 LLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITSMPYRPTTAMWATLIGACCI 600
LLFAEMQSVHGLSP LEHYACMADLFGRVGLLNKAK IIT MPYRPT+AMWATLIGACCI
Sbjct: 541 LLFAEMQSVHGLSPHLEHYACMADLFGRVGLLNKAKGIITRMPYRPTSAMWATLIGACCI 600
Query: 601 HENTDIGKWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSELAKIRTLMRDSGVAKAPGCS 660
H NT+IG+WAAEKLLEM+PEHSGYYVLIANMYAAAGSWS+LAKIRTLMRDSGVAKAPGCS
Sbjct: 601 HGNTNIGEWAAEKLLEMQPEHSGYYVLIANMYAAAGSWSKLAKIRTLMRDSGVAKAPGCS 660
Query: 661 WIDIGSGFVSFLVGDTSNPRALASKHLLDSLNDVMKHGSLVTTDYCDIDDDIF 714
W+D+GSGFVSFLVGDTSNP+AL + LLD+LN+VMKHGSLVT D DID+D F
Sbjct: 661 WVDVGSGFVSFLVGDTSNPQALEANLLLDNLNNVMKHGSLVTKDSHDIDNDSF 712
BLAST of Sed0016377 vs. ExPASy Swiss-Prot
Match:
Q9C9I6 (Pentatricopeptide repeat-containing protein At1g71490 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E67 PE=2 SV=1)
HSP 1 Score: 805.8 bits (2080), Expect = 3.8e-232
Identity = 388/656 (59.15%), Postives = 496/656 (75.61%), Query Frame = 0
Query: 41 DSIFSSLKNFASHGQLSKAFEAFSFIQLRTCYNDSFDLILQSISILLVSCNNCSSLPPGK 100
+S+F SL + ASHG L AF+ FS ++L++ S DL+L S + LL +C + + G
Sbjct: 4 ESLFKSLGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGV 63
Query: 101 QLHGRIISSGLEQDFILVPKLVTFYSSFKLLAEAHTLVENSNLFHPCSWNLLITSYVRNE 160
Q+H ISSG+E +LVPKLVTFYS+F L EA +++ENS++ HP WN+LI SY +NE
Sbjct: 64 QVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNE 123
Query: 161 LHEAAILAYKQMLSKGVLPDNFTFPSILKACGETQNLGFGLEVHKSINAWSNKWSLFVQN 220
L E I AYK+M+SKG+ PD FT+PS+LKACGET ++ FG VH SI S K SL+V N
Sbjct: 124 LFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCN 183
Query: 221 ALISMYGRCGEVDMARNLFDNMLDRDAVSWNSMISCYASKSMWKEAFELFDSMQIKCVEI 280
ALISMY R + +AR LFD M +RDAVSWN++I+CYAS+ MW EAFELFD M VE+
Sbjct: 184 ALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEV 243
Query: 281 NIVTWNIVAGGCLRVGNFTRTLKLLSQMRHFGVHLDNVAMLIGLGACSHIGAIRLGKEIH 340
+++TWNI++GGCL+ GN+ L L+S+MR+F LD VAM+IGL ACS IGAIRLGKEIH
Sbjct: 244 SVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIH 303
Query: 341 GFTIRHCYHKLSNVQNALVTMYARCKDLTRAYSLFRLNDDRSIITWNSMLSGLAHLDRVE 400
G I Y + NV+N L+TMY++CKDL A +FR ++ S+ TWNS++SG A L++ E
Sbjct: 304 GLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSE 363
Query: 401 EALFLFRELLLFGLEPNYVTFASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNAL 460
EA L RE+L+ G +PN +T ASILPLCAR+A+LQHG+EFHCYI +R+ F+DY +LWN+L
Sbjct: 364 EASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSL 423
Query: 461 VDMYARSGKVLEAKRVFDSLNKKDEVTYTSLIAGYGMQGEGSKALRLFKEMKELRIKPDH 520
VD+YA+SGK++ AK+V D ++K+DEVTYTSLI GYG QGEG AL LFKEM IKPDH
Sbjct: 424 VDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDH 483
Query: 521 ITMVAVLSACSHSGLVKPGELLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIIT 580
+T+VAVLSACSHS LV GE LF +MQ +G+ P L+H++CM DL+GR G L KAK+II
Sbjct: 484 VTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIH 543
Query: 581 SMPYRPTTAMWATLIGACCIHENTDIGKWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSE 640
+MPY+P+ A WATL+ AC IH NT IGKWAAEKLLEM+PE+ GYYVLIANMYAAAGSWS+
Sbjct: 544 NMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSK 603
Query: 641 LAKIRTLMRDSGVAKAPGCSWIDIGSGFVSFLVGDTSNPRALASKHLLDSLNDVMK 697
LA++RT+MRD GV K PGC+WID SGF F VGDTS+P A + LLD LN +MK
Sbjct: 604 LAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMK 659
BLAST of Sed0016377 vs. ExPASy Swiss-Prot
Match:
Q4V389 (Pentatricopeptide repeat-containing protein At1g22830 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E24 PE=2 SV=1)
HSP 1 Score: 699.5 bits (1804), Expect = 3.9e-200
Identity = 342/665 (51.43%), Postives = 471/665 (70.83%), Query Frame = 0
Query: 1 MPSSSSQYILRSISMYKLKPFIPKQWDNVPMAMVAS------EFMIDSIFSSLKNFASHG 60
MPSS S+ ILR +++ ++ FIP+ W +P + + E + +F+S ++ SHG
Sbjct: 1 MPSSPSRSILRGLTVSEICKFIPQSWKQLPRPISETSKTHDDESVPQVLFNSFRHCISHG 60
Query: 61 QLSKAFEAFSFIQLRTCYNDSFDLILQSISILLVSCNNCSSLPPGKQLHGRIISSGLEQD 120
QL +AF FS ++ + + S + +L S + LL +C + PG+QLH ISSGLE D
Sbjct: 61 QLYEAFRTFSLLRYQ---SGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFD 120
Query: 121 FILVPKLVTFYSSFKLLAEAHTLVENSNLFHPCSWNLLITSYVRNELHEAAILAYKQMLS 180
+LVPKLVTFYS+F LL EA T+ ENS + HP WN+LI SY+RN+ + ++ YK+M+S
Sbjct: 121 SVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMS 180
Query: 181 KGVLPDNFTFPSILKACGETQNLGFGLEVHKSINAWSNKWSLFVQNALISMYGRCGEVDM 240
KG+ D FT+PS++KAC + +G VH SI S++ +L+V NALISMY R G+VD+
Sbjct: 181 KGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDV 240
Query: 241 ARNLFDNMLDRDAVSWNSMISCYASKSMWKEAFELFDSMQIKCVEINIVTWNIVAGGCLR 300
AR LFD M +RDAVSWN++I+CY S+ EAF+L D M + VE +IVTWN +AGGCL
Sbjct: 241 ARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLE 300
Query: 301 VGNFTRTLKLLSQMRHFGVHLDNVAMLIGLGACSHIGAIRLGKEIHGFTIRHC--YHKLS 360
GN+ L + MR+ V + +VAM+ GL ACSHIGA++ GK H IR C H +
Sbjct: 301 AGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDID 360
Query: 361 NVQNALVTMYARCKDLTRAYSLFRLNDDRSIITWNSMLSGLAHLDRVEEALFLFRELLLF 420
NV+N+L+TMY+RC DL A+ +F+ + S+ TWNS++SG A+ +R EE FL +E+LL
Sbjct: 361 NVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS 420
Query: 421 GLEPNYVTFASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLE 480
G PN++T ASILPL ARV +LQHG+EFHCYI +R+ ++D L+LWN+LVDMYA+SG+++
Sbjct: 421 GFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIA 480
Query: 481 AKRVFDSLNKKDEVTYTSLIAGYGMQGEGSKALRLFKEMKELRIKPDHITMVAVLSACSH 540
AKRVFDS+ K+D+VTYTSLI GYG G+G AL FK+M IKPDH+TMVAVLSACSH
Sbjct: 481 AKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSH 540
Query: 541 SGLVKPGELLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITSMPYRPTTAMWA 600
S LV+ G LF +M+ V G+ RLEHY+CM DL+ R G L+KA++I ++PY P++AM A
Sbjct: 541 SNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCA 600
Query: 601 TLIGACCIHENTDIGKWAAEK-LLEMRPEHSGYYVLIANMYAAAGSWSELAKIRTLMRDS 657
TL+ AC IH NT+IG+WAA+K LLE +PEH G+Y+L+A+MYA GSWS+L ++TL+ D
Sbjct: 601 TLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDL 660
BLAST of Sed0016377 vs. ExPASy Swiss-Prot
Match:
Q9LFL5 (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H92 PE=2 SV=1)
HSP 1 Score: 415.6 bits (1067), Expect = 1.1e-114
Identity = 223/682 (32.70%), Postives = 368/682 (53.96%), Query Frame = 0
Query: 45 SSLKNFASHGQLSKAFEAFSFIQLRTCYNDSFDLILQSISILLVSCNNCSSLPPGKQLHG 104
S ++++ +G +K F + + D++ + + +C SS+ G+ H
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNY-----TFPFVFKACGEISSVRCGESAHA 156
Query: 105 RIISSGLEQDFILVPKLVTFYSSFKLLAEAHTLVENSNLFHPCSWNLLITSYVRNELHEA 164
+ +G + + LV YS + L++A + + +++ SWN +I SY + +
Sbjct: 157 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 216
Query: 165 AILAYKQMLSK-GVLPDNFTFPSILKACGETQNLGFGLEVHKSINAWSNKWSLFVQNALI 224
A+ + +M ++ G PDN T ++L C G ++H ++FV N L+
Sbjct: 217 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 276
Query: 225 SMYGRCGEVDMARNLFDNMLDRDAVSWNSMISCYASKSMWKEAFELFDSMQIKCVEINIV 284
MY +CG +D A +F NM +D VSWN+M++ Y+ +++A LF+ MQ + +++++V
Sbjct: 277 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 336
Query: 285 TWNIVAGGCLRVGNFTRTLKLLSQMRHFGVHLDNVAMLIGLGACSHIGAIRLGKEIHGFT 344
TW+ G + G L + QM G+ + V ++ L C+ +GA+ GKEIH +
Sbjct: 337 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 396
Query: 345 IRHCYHKLSN-------VQNALVTMYARCKDLTRAYSLF--RLNDDRSIITWNSMLSGLA 404
I++ N V N L+ MYA+CK + A ++F +R ++TW M+ G +
Sbjct: 397 IKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS 456
Query: 405 HLDRVEEALFLFRELLLFGLE--PNYVTFASILPLCARVADLQHGREFHCYITKREDFRD 464
+AL L E+ + PN T + L CA +A L+ G++ H Y + +
Sbjct: 457 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV 516
Query: 465 YLLLWNALVDMYARSGKVLEAKRVFDSLNKKDEVTYTSLIAGYGMQGEGSKALRLFKEMK 524
L + N L+DMYA+ G + +A+ VFD++ K+EVT+TSL+ GYGM G G +AL +F EM+
Sbjct: 517 PLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMR 576
Query: 525 ELRIKPDHITMVAVLSACSHSGLVKPGELLFAEMQSVHGLSPRLEHYACMADLFGRVGLL 584
+ K D +T++ VL ACSHSG++ G F M++V G+SP EHYAC+ DL GR G L
Sbjct: 577 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRL 636
Query: 585 NKAKEIITSMPYRPTTAMWATLIGACCIHENTDIGKWAAEKLLEMRPEHSGYYVLIANMY 644
N A +I MP P +W + C IH ++G++AAEK+ E+ H G Y L++N+Y
Sbjct: 637 NAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 696
Query: 645 AAAGSWSELAKIRTLMRDSGVAKAPGCSWIDIGSGFVSFLVGDTSNPRAL-ASKHLLDSL 704
A AG W ++ +IR+LMR GV K PGCSW++ G +F VGD ++P A + LLD +
Sbjct: 697 ANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHM 756
Query: 705 NDVMKHGSLVTTDYC--DIDDD 712
+ G + T + D+DD+
Sbjct: 757 QRIKDIGYVPETGFALHDVDDE 773
BLAST of Sed0016377 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 407.1 bits (1045), Expect = 4.0e-112
Identity = 218/654 (33.33%), Postives = 361/654 (55.20%), Query Frame = 0
Query: 62 AFSFIQLRTCYNDSFDLILQSISILLVSCNNCSSLPPGKQLHGRIISSGLEQDFILVPKL 121
++ F L + + +D I S+ L+ +NC +L + +H ++I GL + KL
Sbjct: 14 SYPFHFLPSSSDPPYDSIRNHPSLSLL--HNCKTLQSLRIIHAQMIKIGLHNTNYALSKL 73
Query: 122 VTF-------------YSSFKLLAEAHTLVENSNLFHPCSWNLLITSYVRNELHEAAILA 181
+ F S FK + E + L+ WN + + + +A+
Sbjct: 74 IEFCILSPHFEGLPYAISVFKTIQEPNLLI----------WNTMFRGHALSSDPVSALKL 133
Query: 182 YKQMLSKGVLPDNFTFPSILKACGETQNLGFGLEVHKSINAWSNKWSLFVQNALISMYGR 241
Y M+S G+LP+++TFP +LK+C +++ G ++H + L+V +LISMY +
Sbjct: 134 YVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQ 193
Query: 242 CGEVDMARNLFDNMLDRDAVSWNSMISCYASKSMWKEAFELFDSMQIKCVEINIVTWNIV 301
G ++ A +FD RD VS+ ++I YAS+ + A +LFD + +K ++V+WN +
Sbjct: 194 NGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAM 253
Query: 302 AGGCLRVGNFTRTLKLLSQMRHFGVHLDNVAMLIGLGACSHIGAIRLGKEIHGFTIRHCY 361
G GN+ L+L M V D M+ + AC+ G+I LG+++H + H +
Sbjct: 254 ISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGF 313
Query: 362 HKLSNVQNALVTMYARCKDLTRAYSLFRLNDDRSIITWNSMLSGLAHLDRVEEALFLFRE 421
+ NAL+ +Y++C +L A LF + +I+WN+++ G H++ +EAL LF+E
Sbjct: 314 GSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQE 373
Query: 422 LLLFGLEPNYVTFASILPLCARVADLQHGREFHCYITKR-EDFRDYLLLWNALVDMYARS 481
+L G PN VT SILP CA + + GR H YI KR + + L +L+DMYA+
Sbjct: 374 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 433
Query: 482 GKVLEAKRVFDSLNKKDEVTYTSLIAGYGMQGEGSKALRLFKEMKELRIKPDHITMVAVL 541
G + A +VF+S+ K ++ ++I G+ M G + LF M+++ I+PD IT V +L
Sbjct: 434 GDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLL 493
Query: 542 SACSHSGLVKPGELLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITSMPYRPT 601
SACSHSG++ G +F M + ++P+LEHY CM DL G GL +A+E+I M P
Sbjct: 494 SACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPD 553
Query: 602 TAMWATLIGACCIHENTDIGKWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSELAKIRTL 661
+W +L+ AC +H N ++G+ AE L+++ PE+ G YVL++N+YA+AG W+E+AK R L
Sbjct: 554 GVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRAL 613
Query: 662 MRDSGVAKAPGCSWIDIGSGFVSFLVGDTSNPRALASKHLLDSLNDVMKHGSLV 702
+ D G+ K PGCS I+I S F++GD +PR +L+ + +++ V
Sbjct: 614 LNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFV 651
BLAST of Sed0016377 vs. ExPASy Swiss-Prot
Match:
Q9LNU6 (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H21 PE=2 SV=2)
HSP 1 Score: 375.2 bits (962), Expect = 1.7e-102
Identity = 201/638 (31.50%), Postives = 335/638 (52.51%), Query Frame = 0
Query: 94 SSLPPGKQLHGRIISSGLEQDFILVPKLVTFYSSFKLLAEAHTLVENSNLFHPCSWNLLI 153
SSL Q H RI+ SG + D + KL+ YS++ +A ++++ S++ LI
Sbjct: 29 SSLSKTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLI 88
Query: 154 TSYVRNELHEAAILAYKQMLSKGVLPDNFTFPSILKACGETQNLGFGLEVHKSINAWSNK 213
+ + +L +I + +M S G++PD+ P++ K C E G ++H
Sbjct: 89 YALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLD 148
Query: 214 WSLFVQNALISMYGRCGEVDMARNLFDNMLDRDAVSWNSMISCYASKSMWKEAFELFDSM 273
FVQ ++ MY RCG + AR +FD M D+D V+ ++++ YA K +E + M
Sbjct: 149 MDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEM 208
Query: 274 QIKCVEINIVTWNIVAGGCLRVGNFTRTLKLLSQMRHFGVHLDNVAMLIGLGACSHIGAI 333
+ +E NIV+WN + G R G + + ++ H G D V + L + +
Sbjct: 209 ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEML 268
Query: 334 RLGKEIHGFTIR---------------------HCYHKLS----------NVQNALVTMY 393
+G+ IHG+ I+ H Y +S V NA +T
Sbjct: 269 NMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL 328
Query: 394 ARCKDLTRAYSLFRLNDDR----SIITWNSMLSGLAHLDRVEEALFLFRELLLFGLEPNY 453
+R + +A +F L ++ ++++W S+++G A + EAL LFRE+ + G++PN+
Sbjct: 329 SRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNH 388
Query: 454 VTFASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLEAKRVFD 513
VT S+LP C +A L HGR H + R D + + +AL+DMYA+ G++ ++ VF+
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAV-RVHLLDNVHVGSALIDMYAKCGRINLSQIVFN 448
Query: 514 SLNKKDEVTYTSLIAGYGMQGEGSKALRLFKEMKELRIKPDHITMVAVLSACSHSGLVKP 573
+ K+ V + SL+ G+ M G+ + + +F+ + R+KPD I+ ++LSAC GL
Sbjct: 449 MMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDE 508
Query: 574 GELLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITSMPYRPTTAMWATLIGAC 633
G F M +G+ PRLEHY+CM +L GR G L +A ++I MP+ P + +W L+ +C
Sbjct: 509 GWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSC 568
Query: 634 CIHENTDIGKWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSELAKIRTLMRDSGVAKAPG 693
+ N D+ + AAEKL + PE+ G YVL++N+YAA G W+E+ IR M G+ K PG
Sbjct: 569 RLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPG 628
Query: 694 CSWIDIGSGFVSFLVGDTSNPRALASKHLLDSLNDVMK 697
CSWI + + + L GD S+P+ +D ++ M+
Sbjct: 629 CSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMR 665
BLAST of Sed0016377 vs. ExPASy TrEMBL
Match:
A0A6J1I8V4 (pentatricopeptide repeat-containing protein At1g71490 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472055 PE=4 SV=1)
HSP 1 Score: 1270.4 bits (3286), Expect = 0.0e+00
Identity = 617/713 (86.54%), Postives = 665/713 (93.27%), Query Frame = 0
Query: 1 MPSSSSQYILRSISMYKLKPFIPKQWDNVPMAMVASEFMIDSIFSSLKNFASHGQLSKAF 60
M SSS +YILR +S+YKL FIPKQW NVP++ EFMI+SIF SLK+FASHGQLSKAF
Sbjct: 1 MSSSSPEYILRGLSIYKLLTFIPKQWKNVPVSN-GREFMINSIFYSLKSFASHGQLSKAF 60
Query: 61 EAFSFIQLRTCYNDSFDLILQSISILLVSCNNCSSLPPGKQLHGRIISSGLEQDFILVPK 120
EAFS +QLR YNDSFDLI+QSISILLVSC CSSLP GKQLHGRIISSGLE+D ILVPK
Sbjct: 61 EAFSLVQLRRSYNDSFDLIVQSISILLVSCTTCSSLPSGKQLHGRIISSGLEEDSILVPK 120
Query: 121 LVTFYSSFKLLAEAHTLVENSNLFHPCSWNLLITSYVRNELHEAAILAYKQMLSKGVLPD 180
LVTFYSSFKLLAEAHTLVENSNLFHPC WNLLITSYVRNELHE+AILAYKQMLSKGV PD
Sbjct: 121 LVTFYSSFKLLAEAHTLVENSNLFHPCPWNLLITSYVRNELHESAILAYKQMLSKGVRPD 180
Query: 181 NFTFPSILKACGETQNLGFGLEVHKSINAWSNKWSLFVQNALISMYGRCGEVDMARNLFD 240
NFTFPSILKACGETQNLGFGLEVHK IN+WSN+WSLFVQNALISMYGRCGE+D ARNLFD
Sbjct: 181 NFTFPSILKACGETQNLGFGLEVHKCINSWSNQWSLFVQNALISMYGRCGELDTARNLFD 240
Query: 241 NMLDRDAVSWNSMISCYASKSMWKEAFELFDSMQIKCVEINIVTWNIVAGGCLRVGNFTR 300
NMLDRDAVSWNSMISCYASK MWKEAFELFD MQ KC+EINIVTWNI+AGGCLR+G FTR
Sbjct: 241 NMLDRDAVSWNSMISCYASKGMWKEAFELFDIMQSKCLEINIVTWNIIAGGCLRLGKFTR 300
Query: 301 TLKLLSQMRHFGVHLDNVAMLIGLGACSHIGAIRLGKEIHGFTIRHCYHKLSNVQNALVT 360
LKLLSQMR+FG+HLD+VAM+IGLGACSHIGAIRLGKEIHGFTIRHCYHK S VQNAL+T
Sbjct: 301 ALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHKSSTVQNALLT 360
Query: 361 MYARCKDLTRAYSLFRLNDDRSIITWNSMLSGLAHLDRVEEALFLFRELLLFGLEPNYVT 420
MYARCKD+ RAY LFRLNDD+SIITWNSMLSGL+H+DRVE+AL LFRE LLFG+EPNYVT
Sbjct: 361 MYARCKDIMRAYILFRLNDDKSIITWNSMLSGLSHVDRVEDALRLFREFLLFGVEPNYVT 420
Query: 421 FASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLEAKRVFDSL 480
FASILPLCARVADLQHGREFHCYITKR+DF+DYLLLWNALVDMYARSGKV+EAKRVFDSL
Sbjct: 421 FASILPLCARVADLQHGREFHCYITKRQDFQDYLLLWNALVDMYARSGKVIEAKRVFDSL 480
Query: 481 NKKDEVTYTSLIAGYGMQGEGSKALRLFKEMKELRIKPDHITMVAVLSACSHSGLVKPGE 540
+KKDEVTYTSLIAGYGMQGEG KALRLF+EMK + IKPDHITMVAVLSACSHSGLVK GE
Sbjct: 481 SKKDEVTYTSLIAGYGMQGEGRKALRLFEEMKSVDIKPDHITMVAVLSACSHSGLVKQGE 540
Query: 541 LLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITSMPYRPTTAMWATLIGACCI 600
+LFAEMQSVHGLSP LEHYACMADLFGRVGLL++AKEIIT MPYRPT+AMWATLIGACCI
Sbjct: 541 VLFAEMQSVHGLSPHLEHYACMADLFGRVGLLDRAKEIITRMPYRPTSAMWATLIGACCI 600
Query: 601 HENTDIGKWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSELAKIRTLMRDSGVAKAPGCS 660
H NTDIG+WAAEKLLEM+PEHSGYYVLIANMYAAAGSWS+LAKIRTLMRD GVAKAPGCS
Sbjct: 601 HRNTDIGEWAAEKLLEMKPEHSGYYVLIANMYAAAGSWSKLAKIRTLMRDYGVAKAPGCS 660
Query: 661 WIDIGSGFVSFLVGDTSNPRALASKHLLDSLNDVMKHGSLVTTDYCDIDDDIF 714
W+++GS FVSFLVGDTSNP+AL SKHLLD LNDVMKHG+LV TD DI +D+F
Sbjct: 661 WVEVGSEFVSFLVGDTSNPQALESKHLLDDLNDVMKHGTLVMTDDYDIGNDVF 712
BLAST of Sed0016377 vs. ExPASy TrEMBL
Match:
A0A6J1EI84 (pentatricopeptide repeat-containing protein At1g71490 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432795 PE=4 SV=1)
HSP 1 Score: 1269.6 bits (3284), Expect = 0.0e+00
Identity = 618/713 (86.68%), Postives = 664/713 (93.13%), Query Frame = 0
Query: 1 MPSSSSQYILRSISMYKLKPFIPKQWDNVPMAMVASEFMIDSIFSSLKNFASHGQLSKAF 60
M SSS +YILR +S+YKL FIPKQW NVP++ EFMI SIF SLK+FASHGQLSKAF
Sbjct: 1 MSSSSPEYILRGLSIYKLLTFIPKQWKNVPVSN-GREFMITSIFDSLKSFASHGQLSKAF 60
Query: 61 EAFSFIQLRTCYNDSFDLILQSISILLVSCNNCSSLPPGKQLHGRIISSGLEQDFILVPK 120
EAFS +QLR YNDSFDLI+QSISILLVSC CSSLP GKQLHGRIISSGLE+D ILVPK
Sbjct: 61 EAFSLVQLRGSYNDSFDLIVQSISILLVSCTTCSSLPSGKQLHGRIISSGLEEDSILVPK 120
Query: 121 LVTFYSSFKLLAEAHTLVENSNLFHPCSWNLLITSYVRNELHEAAILAYKQMLSKGVLPD 180
LVTFYSSFKLLAEAHTLVENSNLFHPC WNLLITSYVRNELHE+AILAYKQMLSKGV PD
Sbjct: 121 LVTFYSSFKLLAEAHTLVENSNLFHPCPWNLLITSYVRNELHESAILAYKQMLSKGVRPD 180
Query: 181 NFTFPSILKACGETQNLGFGLEVHKSINAWSNKWSLFVQNALISMYGRCGEVDMARNLFD 240
NFTFPSILKACGETQNLGFGLEVHK IN+WSN+WSLFVQNALISMYGRCGE+D ARNLFD
Sbjct: 181 NFTFPSILKACGETQNLGFGLEVHKCINSWSNQWSLFVQNALISMYGRCGELDTARNLFD 240
Query: 241 NMLDRDAVSWNSMISCYASKSMWKEAFELFDSMQIKCVEINIVTWNIVAGGCLRVGNFTR 300
NMLDRDAVSWNSMISCYAS MWKEAFELFD MQ KC+EINIVTWNI+AGGCLR+G FT+
Sbjct: 241 NMLDRDAVSWNSMISCYASNGMWKEAFELFDIMQSKCLEINIVTWNIIAGGCLRLGKFTQ 300
Query: 301 TLKLLSQMRHFGVHLDNVAMLIGLGACSHIGAIRLGKEIHGFTIRHCYHKLSNVQNALVT 360
LKLLSQMR+FG+HLD+VAM+IGLGACSHIGAIRLGKEIHGFTIRHCYHK S VQNAL+T
Sbjct: 301 ALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHKSSTVQNALLT 360
Query: 361 MYARCKDLTRAYSLFRLNDDRSIITWNSMLSGLAHLDRVEEALFLFRELLLFGLEPNYVT 420
MYARCKD+ RAY LFRLNDD+SIITWNSMLSGL+H+DRVE+AL LFRELLL+G+EPNYVT
Sbjct: 361 MYARCKDIMRAYILFRLNDDKSIITWNSMLSGLSHVDRVEDALRLFRELLLYGVEPNYVT 420
Query: 421 FASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLEAKRVFDSL 480
FASILPLCARVADLQHGREFHCYITKR+DF+DYLLLWNALVDMYARSGKVLEAKRVFDSL
Sbjct: 421 FASILPLCARVADLQHGREFHCYITKRQDFQDYLLLWNALVDMYARSGKVLEAKRVFDSL 480
Query: 481 NKKDEVTYTSLIAGYGMQGEGSKALRLFKEMKELRIKPDHITMVAVLSACSHSGLVKPGE 540
+KKDEVTYTSLIAGYGMQGEG KALRLF+EMK + IKPDHITMVAVLSACSHSGLVK GE
Sbjct: 481 SKKDEVTYTSLIAGYGMQGEGRKALRLFEEMKSVDIKPDHITMVAVLSACSHSGLVKQGE 540
Query: 541 LLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITSMPYRPTTAMWATLIGACCI 600
+LFAEMQSVHGLSPRLEHYACMADLFGRVGLL++AKEIIT MPYRPT+AMWATLIGACCI
Sbjct: 541 VLFAEMQSVHGLSPRLEHYACMADLFGRVGLLDRAKEIITRMPYRPTSAMWATLIGACCI 600
Query: 601 HENTDIGKWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSELAKIRTLMRDSGVAKAPGCS 660
H NTDIG+WAAEKLLEM+PEHSGYYVLIANMYAAAGSWS+LAKIRTLMRD GVAKAPGCS
Sbjct: 601 HRNTDIGEWAAEKLLEMKPEHSGYYVLIANMYAAAGSWSKLAKIRTLMRDYGVAKAPGCS 660
Query: 661 WIDIGSGFVSFLVGDTSNPRALASKHLLDSLNDVMKHGSLVTTDYCDIDDDIF 714
W+++GS FVSFLVGDTSNP+AL SKHLLD LNDVMKHG+LV D DI DDIF
Sbjct: 661 WVEVGSEFVSFLVGDTSNPQALESKHLLDGLNDVMKHGTLVMIDDYDIGDDIF 712
BLAST of Sed0016377 vs. ExPASy TrEMBL
Match:
A0A6J1CJU8 (pentatricopeptide repeat-containing protein At1g71490-like OS=Momordica charantia OX=3673 GN=LOC111012088 PE=4 SV=1)
HSP 1 Score: 1259.2 bits (3257), Expect = 0.0e+00
Identity = 618/713 (86.68%), Postives = 655/713 (91.87%), Query Frame = 0
Query: 1 MPSSSSQYILRSISMYKLKPFIPKQWDNVPMAMVASEFMIDSIFSSLKNFASHGQLSKAF 60
M SSSSQYI R +S+YKL+ FIPKQW N P++ SEFMI +FSSLK+FA HGQLSKAF
Sbjct: 1 MSSSSSQYIFRGLSLYKLQTFIPKQWKNKPVSN-GSEFMIGPVFSSLKSFACHGQLSKAF 60
Query: 61 EAFSFIQLRTCYNDSFDLILQSISILLVSCNNCSSLPPGKQLHGRIISSGLEQDFILVPK 120
EAFS IQLRT YNDSFDLILQS SILLVSC N SSLPPG+QLHGRII SGLEQD ILVPK
Sbjct: 61 EAFSLIQLRTGYNDSFDLILQSFSILLVSCTNASSLPPGRQLHGRIILSGLEQDSILVPK 120
Query: 121 LVTFYSSFKLLAEAHTLVENSNLFHPCSWNLLITSYVRNELHEAAILAYKQMLSKGVLPD 180
LVTFYSSFKLLAEAHTLVENSN+FHPC WNLLITSYVRN LHEAAIL YKQMLS+G+ PD
Sbjct: 121 LVTFYSSFKLLAEAHTLVENSNIFHPCPWNLLITSYVRNGLHEAAILVYKQMLSRGIRPD 180
Query: 181 NFTFPSILKACGETQNLGFGLEVHKSINAWSNKWSLFVQNALISMYGRCGEVDMARNLFD 240
NFTFPSILKACGETQNLGFGLEVHK INAWS +WSLFVQNALISMYGRCGEVD ARNLFD
Sbjct: 181 NFTFPSILKACGETQNLGFGLEVHKYINAWSTEWSLFVQNALISMYGRCGEVDTARNLFD 240
Query: 241 NMLDRDAVSWNSMISCYASKSMWKEAFELFDSMQIKCVEINIVTWNIVAGGCLRVGNFTR 300
NMLDRDAVSWNSMISCYASK MWKEAFELFD+MQ KC+EINIVTWNI+AGGCLRVGNF
Sbjct: 241 NMLDRDAVSWNSMISCYASKGMWKEAFELFDNMQSKCIEINIVTWNIIAGGCLRVGNFVG 300
Query: 301 TLKLLSQMRHFGVHLDNVAMLIGLGACSHIGAIRLGKEIHGFTIRHCYHKLSNVQNALVT 360
LKLLSQMR+FG HLD VAM+IGLGACSHIGAIRLGKEIHGFTIRHCYH+LS VQNALVT
Sbjct: 301 ALKLLSQMRNFGAHLDYVAMIIGLGACSHIGAIRLGKEIHGFTIRHCYHRLSIVQNALVT 360
Query: 361 MYARCKDLTRAYSLFRLNDDRSIITWNSMLSGLAHLDRVEEALFLFRELLLFGLEPNYVT 420
MYARCKD+ AY LFRLN D+SIITWNSMLSG HLDRVEEALFLFRELLL G+EPNYVT
Sbjct: 361 MYARCKDIMNAYILFRLNSDKSIITWNSMLSGYTHLDRVEEALFLFRELLLSGVEPNYVT 420
Query: 421 FASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLEAKRVFDSL 480
ASILPLCARVADLQHGREFHCYITKRED DYLLLWNALVDMYARSGKVLEAKRVFDSL
Sbjct: 421 IASILPLCARVADLQHGREFHCYITKREDLGDYLLLWNALVDMYARSGKVLEAKRVFDSL 480
Query: 481 NKKDEVTYTSLIAGYGMQGEGSKALRLFKEMKELRIKPDHITMVAVLSACSHSGLVKPGE 540
+KKDEVTYTSLIAGYGMQGEGSKALRLF+EMK +IKPDHITMVAVLSACSHSGL+K GE
Sbjct: 481 SKKDEVTYTSLIAGYGMQGEGSKALRLFQEMKRFQIKPDHITMVAVLSACSHSGLLKQGE 540
Query: 541 LLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITSMPYRPTTAMWATLIGACCI 600
LLFAEMQSVHGLSP LEHYACMADLFGRVGLLNKAK IIT MPYRPT+AMWATLIGACCI
Sbjct: 541 LLFAEMQSVHGLSPHLEHYACMADLFGRVGLLNKAKGIITRMPYRPTSAMWATLIGACCI 600
Query: 601 HENTDIGKWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSELAKIRTLMRDSGVAKAPGCS 660
H NT+IG+WAAEKLLEM+PEHSGYYVLIANMYAAAGSWS+LAKIRTLMRDSGVAKAPGCS
Sbjct: 601 HGNTNIGEWAAEKLLEMQPEHSGYYVLIANMYAAAGSWSKLAKIRTLMRDSGVAKAPGCS 660
Query: 661 WIDIGSGFVSFLVGDTSNPRALASKHLLDSLNDVMKHGSLVTTDYCDIDDDIF 714
W+D+GSGFVSFLVGDTSNP+AL + LLD+LN+VMKHGSLVT D DID+D F
Sbjct: 661 WVDVGSGFVSFLVGDTSNPQALEANLLLDNLNNVMKHGSLVTKDSHDIDNDSF 712
BLAST of Sed0016377 vs. ExPASy TrEMBL
Match:
A0A1S3CB12 (pentatricopeptide repeat-containing protein At1g71490 OS=Cucumis melo OX=3656 GN=LOC103498667 PE=4 SV=1)
HSP 1 Score: 1191.0 bits (3080), Expect = 0.0e+00
Identity = 587/713 (82.33%), Postives = 640/713 (89.76%), Query Frame = 0
Query: 1 MPSSSSQYILRSISMYKLKPFIPKQWDNVPMAMVASEFMIDSIFSSLKNFASHGQLSKAF 60
M S S+ IL+ +S+ KL+ FIPK W +P++ +SEFMI SIFSSLK+FASHGQLSK F
Sbjct: 1 MSLSPSRCILKGLSIDKLETFIPKTWKKLPVSN-SSEFMIGSIFSSLKDFASHGQLSKTF 60
Query: 61 EAFSFIQLRTCYNDSFDLILQSISILLVSCNNCSSLPPGKQLHGRIISSGLEQDFILVPK 120
EAFS IQLRT YNDSFDLILQSISILLVSC CSSLPPGKQLHG IISSGL +D LV K
Sbjct: 61 EAFSLIQLRTSYNDSFDLILQSISILLVSCTKCSSLPPGKQLHGHIISSGLVEDSFLVSK 120
Query: 121 LVTFYSSFKLLAEAHTLVENSNLFHPCSWNLLITSYVRNELHEAAILAYKQMLSKGVLPD 180
LV FYSS + L EAHTLVE SNLF PCSWN+L+TSYVRN+L+EAAILAYKQMLSKGV PD
Sbjct: 121 LVMFYSSLECLPEAHTLVETSNLFRPCSWNILMTSYVRNKLYEAAILAYKQMLSKGVRPD 180
Query: 181 NFTFPSILKACGETQNLGFGLEVHKSINAWSNKWSLFVQNALISMYGRCGEVDMARNLFD 240
NFTFPSILKACGETQNL FGLEVHKSINA S WSLFV NALISMYGRCGEVD AR LFD
Sbjct: 181 NFTFPSILKACGETQNLEFGLEVHKSINACSTNWSLFVHNALISMYGRCGEVDTARYLFD 240
Query: 241 NMLDRDAVSWNSMISCYASKSMWKEAFELFDSMQIKCVEINIVTWNIVAGGCLRVGNFTR 300
ML+RD VSWNSMISCY+S+ MW+EAFELF+SMQ K +EIN+VTWNI+AGGCLRVGNFTR
Sbjct: 241 IMLERDGVSWNSMISCYSSRGMWREAFELFESMQSKSLEINVVTWNIIAGGCLRVGNFTR 300
Query: 301 TLKLLSQMRHFGVHLDNVAMLIGLGACSHIGAIRLGKEIHGFTIRHCYHKLSNVQNALVT 360
L LLSQMR+FG+HLD+VAM+IGLGACSHIGAIRLGKEIHGFTIRH +H LS VQNALVT
Sbjct: 301 ALNLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHYHHMLSTVQNALVT 360
Query: 361 MYARCKDLTRAYSLFRLNDDRSIITWNSMLSGLAHLDRVEEALFLFRELLLFGLEPNYVT 420
MYARCKD+ AY LFRLNDD+SIITWNSMLSGL HLDRVE+AL LFRELLLFG+EPNYVT
Sbjct: 361 MYARCKDIRHAYMLFRLNDDKSIITWNSMLSGLTHLDRVEDALCLFRELLLFGVEPNYVT 420
Query: 421 FASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLEAKRVFDSL 480
FASILPLCARVA+LQHGREFHCYITKR DFRD+LLLWNALVDMYARSGKV EAKRVFDSL
Sbjct: 421 FASILPLCARVANLQHGREFHCYITKRHDFRDHLLLWNALVDMYARSGKVSEAKRVFDSL 480
Query: 481 NKKDEVTYTSLIAGYGMQGEGSKALRLFKEMKELRIKPDHITMVAVLSACSHSGLVKPGE 540
+KKDEVTYTSLIAGYGMQGEG KALRLF+EMK +IKPDHITMVAVLSACSHSGL+ GE
Sbjct: 481 SKKDEVTYTSLIAGYGMQGEGGKALRLFEEMKRFQIKPDHITMVAVLSACSHSGLLNQGE 540
Query: 541 LLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITSMPYRPTTAMWATLIGACCI 600
LLFAEMQSVHGLSPRLEHY+CMADLFGRVGLLNKAKEIIT MPYRPT+A+WATLIGACCI
Sbjct: 541 LLFAEMQSVHGLSPRLEHYSCMADLFGRVGLLNKAKEIITRMPYRPTSAIWATLIGACCI 600
Query: 601 HENTDIGKWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSELAKIRTLMRDSGVAKAPGCS 660
H NTDIG+WAAEKLLEM+PEHSGYYVLIANMYAAAGSWS+LA+IRT MRDSGVAK PGCS
Sbjct: 601 HGNTDIGEWAAEKLLEMQPEHSGYYVLIANMYAAAGSWSKLAEIRTRMRDSGVAKVPGCS 660
Query: 661 WIDIGSGFVSFLVGDTSNPRALASKHLLDSLNDVMKHGSLVTTDYCDIDDDIF 714
W+D+GS FVSF VGDTS+P+AL SK LLDSL DV+KH SL+TTD D D+IF
Sbjct: 661 WVDVGSEFVSFSVGDTSSPQALESKLLLDSLYDVIKHDSLITTDNYDTGDNIF 712
BLAST of Sed0016377 vs. ExPASy TrEMBL
Match:
A0A5D3BN10 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00830 PE=4 SV=1)
HSP 1 Score: 1191.0 bits (3080), Expect = 0.0e+00
Identity = 587/713 (82.33%), Postives = 640/713 (89.76%), Query Frame = 0
Query: 1 MPSSSSQYILRSISMYKLKPFIPKQWDNVPMAMVASEFMIDSIFSSLKNFASHGQLSKAF 60
M S S+ IL+ +S+ KL+ FIPK W +P++ +SEFMI SIFSSLK+FASHGQLSK F
Sbjct: 1 MSLSPSRCILKGLSIDKLETFIPKTWKKLPVSN-SSEFMIGSIFSSLKDFASHGQLSKTF 60
Query: 61 EAFSFIQLRTCYNDSFDLILQSISILLVSCNNCSSLPPGKQLHGRIISSGLEQDFILVPK 120
EAFS IQLRT YNDSFDLILQSISILLVSC CSSLPPGKQLHG IISSGL +D LV K
Sbjct: 61 EAFSLIQLRTSYNDSFDLILQSISILLVSCTKCSSLPPGKQLHGHIISSGLVEDSFLVSK 120
Query: 121 LVTFYSSFKLLAEAHTLVENSNLFHPCSWNLLITSYVRNELHEAAILAYKQMLSKGVLPD 180
LV FYSS + L EAHTLVE SNLF PCSWN+L+TSYVRN+L+EAAILAYKQMLSKGV PD
Sbjct: 121 LVMFYSSLECLPEAHTLVETSNLFRPCSWNILMTSYVRNKLYEAAILAYKQMLSKGVRPD 180
Query: 181 NFTFPSILKACGETQNLGFGLEVHKSINAWSNKWSLFVQNALISMYGRCGEVDMARNLFD 240
NFTFPSILKACGETQNL FGLEVHKSINA S WSLFV NALISMYGRCGEVD AR LFD
Sbjct: 181 NFTFPSILKACGETQNLEFGLEVHKSINACSTNWSLFVHNALISMYGRCGEVDTARYLFD 240
Query: 241 NMLDRDAVSWNSMISCYASKSMWKEAFELFDSMQIKCVEINIVTWNIVAGGCLRVGNFTR 300
ML+RD VSWNSMISCY+S+ MW+EAFELF+SMQ K +EIN+VTWNI+AGGCLRVGNFTR
Sbjct: 241 IMLERDGVSWNSMISCYSSRGMWREAFELFESMQSKSLEINVVTWNIIAGGCLRVGNFTR 300
Query: 301 TLKLLSQMRHFGVHLDNVAMLIGLGACSHIGAIRLGKEIHGFTIRHCYHKLSNVQNALVT 360
L LLSQMR+FG+HLD+VAM+IGLGACSHIGAIRLGKEIHGFTIRH +H LS VQNALVT
Sbjct: 301 ALNLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHYHHMLSTVQNALVT 360
Query: 361 MYARCKDLTRAYSLFRLNDDRSIITWNSMLSGLAHLDRVEEALFLFRELLLFGLEPNYVT 420
MYARCKD+ AY LFRLNDD+SIITWNSMLSGL HLDRVE+AL LFRELLLFG+EPNYVT
Sbjct: 361 MYARCKDIRHAYMLFRLNDDKSIITWNSMLSGLTHLDRVEDALCLFRELLLFGVEPNYVT 420
Query: 421 FASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLEAKRVFDSL 480
FASILPLCARVA+LQHGREFHCYITKR DFRD+LLLWNALVDMYARSGKV EAKRVFDSL
Sbjct: 421 FASILPLCARVANLQHGREFHCYITKRHDFRDHLLLWNALVDMYARSGKVSEAKRVFDSL 480
Query: 481 NKKDEVTYTSLIAGYGMQGEGSKALRLFKEMKELRIKPDHITMVAVLSACSHSGLVKPGE 540
+KKDEVTYTSLIAGYGMQGEG KALRLF+EMK +IKPDHITMVAVLSACSHSGL+ GE
Sbjct: 481 SKKDEVTYTSLIAGYGMQGEGGKALRLFEEMKRFQIKPDHITMVAVLSACSHSGLLNQGE 540
Query: 541 LLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITSMPYRPTTAMWATLIGACCI 600
LLFAEMQSVHGLSPRLEHY+CMADLFGRVGLLNKAKEIIT MPYRPT+A+WATLIGACCI
Sbjct: 541 LLFAEMQSVHGLSPRLEHYSCMADLFGRVGLLNKAKEIITRMPYRPTSAIWATLIGACCI 600
Query: 601 HENTDIGKWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSELAKIRTLMRDSGVAKAPGCS 660
H NTDIG+WAAEKLLEM+PEHSGYYVLIANMYAAAGSWS+LA+IRT MRDSGVAK PGCS
Sbjct: 601 HGNTDIGEWAAEKLLEMQPEHSGYYVLIANMYAAAGSWSKLAEIRTRMRDSGVAKVPGCS 660
Query: 661 WIDIGSGFVSFLVGDTSNPRALASKHLLDSLNDVMKHGSLVTTDYCDIDDDIF 714
W+D+GS FVSF VGDTS+P+AL SK LLDSL DV+KH SL+TTD D D+IF
Sbjct: 661 WVDVGSEFVSFSVGDTSSPQALESKLLLDSLYDVIKHDSLITTDNYDTGDNIF 712
BLAST of Sed0016377 vs. TAIR 10
Match:
AT1G71490.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 805.8 bits (2080), Expect = 2.7e-233
Identity = 388/656 (59.15%), Postives = 496/656 (75.61%), Query Frame = 0
Query: 41 DSIFSSLKNFASHGQLSKAFEAFSFIQLRTCYNDSFDLILQSISILLVSCNNCSSLPPGK 100
+S+F SL + ASHG L AF+ FS ++L++ S DL+L S + LL +C + + G
Sbjct: 4 ESLFKSLGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGV 63
Query: 101 QLHGRIISSGLEQDFILVPKLVTFYSSFKLLAEAHTLVENSNLFHPCSWNLLITSYVRNE 160
Q+H ISSG+E +LVPKLVTFYS+F L EA +++ENS++ HP WN+LI SY +NE
Sbjct: 64 QVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNE 123
Query: 161 LHEAAILAYKQMLSKGVLPDNFTFPSILKACGETQNLGFGLEVHKSINAWSNKWSLFVQN 220
L E I AYK+M+SKG+ PD FT+PS+LKACGET ++ FG VH SI S K SL+V N
Sbjct: 124 LFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCN 183
Query: 221 ALISMYGRCGEVDMARNLFDNMLDRDAVSWNSMISCYASKSMWKEAFELFDSMQIKCVEI 280
ALISMY R + +AR LFD M +RDAVSWN++I+CYAS+ MW EAFELFD M VE+
Sbjct: 184 ALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEV 243
Query: 281 NIVTWNIVAGGCLRVGNFTRTLKLLSQMRHFGVHLDNVAMLIGLGACSHIGAIRLGKEIH 340
+++TWNI++GGCL+ GN+ L L+S+MR+F LD VAM+IGL ACS IGAIRLGKEIH
Sbjct: 244 SVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIH 303
Query: 341 GFTIRHCYHKLSNVQNALVTMYARCKDLTRAYSLFRLNDDRSIITWNSMLSGLAHLDRVE 400
G I Y + NV+N L+TMY++CKDL A +FR ++ S+ TWNS++SG A L++ E
Sbjct: 304 GLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSE 363
Query: 401 EALFLFRELLLFGLEPNYVTFASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNAL 460
EA L RE+L+ G +PN +T ASILPLCAR+A+LQHG+EFHCYI +R+ F+DY +LWN+L
Sbjct: 364 EASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSL 423
Query: 461 VDMYARSGKVLEAKRVFDSLNKKDEVTYTSLIAGYGMQGEGSKALRLFKEMKELRIKPDH 520
VD+YA+SGK++ AK+V D ++K+DEVTYTSLI GYG QGEG AL LFKEM IKPDH
Sbjct: 424 VDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDH 483
Query: 521 ITMVAVLSACSHSGLVKPGELLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIIT 580
+T+VAVLSACSHS LV GE LF +MQ +G+ P L+H++CM DL+GR G L KAK+II
Sbjct: 484 VTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIH 543
Query: 581 SMPYRPTTAMWATLIGACCIHENTDIGKWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSE 640
+MPY+P+ A WATL+ AC IH NT IGKWAAEKLLEM+PE+ GYYVLIANMYAAAGSWS+
Sbjct: 544 NMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSK 603
Query: 641 LAKIRTLMRDSGVAKAPGCSWIDIGSGFVSFLVGDTSNPRALASKHLLDSLNDVMK 697
LA++RT+MRD GV K PGC+WID SGF F VGDTS+P A + LLD LN +MK
Sbjct: 604 LAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMK 659
BLAST of Sed0016377 vs. TAIR 10
Match:
AT1G22830.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 699.5 bits (1804), Expect = 2.8e-201
Identity = 342/665 (51.43%), Postives = 471/665 (70.83%), Query Frame = 0
Query: 1 MPSSSSQYILRSISMYKLKPFIPKQWDNVPMAMVAS------EFMIDSIFSSLKNFASHG 60
MPSS S+ ILR +++ ++ FIP+ W +P + + E + +F+S ++ SHG
Sbjct: 1 MPSSPSRSILRGLTVSEICKFIPQSWKQLPRPISETSKTHDDESVPQVLFNSFRHCISHG 60
Query: 61 QLSKAFEAFSFIQLRTCYNDSFDLILQSISILLVSCNNCSSLPPGKQLHGRIISSGLEQD 120
QL +AF FS ++ + + S + +L S + LL +C + PG+QLH ISSGLE D
Sbjct: 61 QLYEAFRTFSLLRYQ---SGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFD 120
Query: 121 FILVPKLVTFYSSFKLLAEAHTLVENSNLFHPCSWNLLITSYVRNELHEAAILAYKQMLS 180
+LVPKLVTFYS+F LL EA T+ ENS + HP WN+LI SY+RN+ + ++ YK+M+S
Sbjct: 121 SVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMS 180
Query: 181 KGVLPDNFTFPSILKACGETQNLGFGLEVHKSINAWSNKWSLFVQNALISMYGRCGEVDM 240
KG+ D FT+PS++KAC + +G VH SI S++ +L+V NALISMY R G+VD+
Sbjct: 181 KGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDV 240
Query: 241 ARNLFDNMLDRDAVSWNSMISCYASKSMWKEAFELFDSMQIKCVEINIVTWNIVAGGCLR 300
AR LFD M +RDAVSWN++I+CY S+ EAF+L D M + VE +IVTWN +AGGCL
Sbjct: 241 ARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLE 300
Query: 301 VGNFTRTLKLLSQMRHFGVHLDNVAMLIGLGACSHIGAIRLGKEIHGFTIRHC--YHKLS 360
GN+ L + MR+ V + +VAM+ GL ACSHIGA++ GK H IR C H +
Sbjct: 301 AGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDID 360
Query: 361 NVQNALVTMYARCKDLTRAYSLFRLNDDRSIITWNSMLSGLAHLDRVEEALFLFRELLLF 420
NV+N+L+TMY+RC DL A+ +F+ + S+ TWNS++SG A+ +R EE FL +E+LL
Sbjct: 361 NVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS 420
Query: 421 GLEPNYVTFASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLE 480
G PN++T ASILPL ARV +LQHG+EFHCYI +R+ ++D L+LWN+LVDMYA+SG+++
Sbjct: 421 GFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIA 480
Query: 481 AKRVFDSLNKKDEVTYTSLIAGYGMQGEGSKALRLFKEMKELRIKPDHITMVAVLSACSH 540
AKRVFDS+ K+D+VTYTSLI GYG G+G AL FK+M IKPDH+TMVAVLSACSH
Sbjct: 481 AKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSH 540
Query: 541 SGLVKPGELLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITSMPYRPTTAMWA 600
S LV+ G LF +M+ V G+ RLEHY+CM DL+ R G L+KA++I ++PY P++AM A
Sbjct: 541 SNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCA 600
Query: 601 TLIGACCIHENTDIGKWAAEK-LLEMRPEHSGYYVLIANMYAAAGSWSELAKIRTLMRDS 657
TL+ AC IH NT+IG+WAA+K LLE +PEH G+Y+L+A+MYA GSWS+L ++TL+ D
Sbjct: 601 TLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDL 660
BLAST of Sed0016377 vs. TAIR 10
Match:
AT1G22830.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 699.5 bits (1804), Expect = 2.8e-201
Identity = 342/665 (51.43%), Postives = 471/665 (70.83%), Query Frame = 0
Query: 1 MPSSSSQYILRSISMYKLKPFIPKQWDNVPMAMVAS------EFMIDSIFSSLKNFASHG 60
MPSS S+ ILR +++ ++ FIP+ W +P + + E + +F+S ++ SHG
Sbjct: 1 MPSSPSRSILRGLTVSEICKFIPQSWKQLPRPISETSKTHDDESVPQVLFNSFRHCISHG 60
Query: 61 QLSKAFEAFSFIQLRTCYNDSFDLILQSISILLVSCNNCSSLPPGKQLHGRIISSGLEQD 120
QL +AF FS ++ + + S + +L S + LL +C + PG+QLH ISSGLE D
Sbjct: 61 QLYEAFRTFSLLRYQ---SGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFD 120
Query: 121 FILVPKLVTFYSSFKLLAEAHTLVENSNLFHPCSWNLLITSYVRNELHEAAILAYKQMLS 180
+LVPKLVTFYS+F LL EA T+ ENS + HP WN+LI SY+RN+ + ++ YK+M+S
Sbjct: 121 SVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMS 180
Query: 181 KGVLPDNFTFPSILKACGETQNLGFGLEVHKSINAWSNKWSLFVQNALISMYGRCGEVDM 240
KG+ D FT+PS++KAC + +G VH SI S++ +L+V NALISMY R G+VD+
Sbjct: 181 KGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDV 240
Query: 241 ARNLFDNMLDRDAVSWNSMISCYASKSMWKEAFELFDSMQIKCVEINIVTWNIVAGGCLR 300
AR LFD M +RDAVSWN++I+CY S+ EAF+L D M + VE +IVTWN +AGGCL
Sbjct: 241 ARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLE 300
Query: 301 VGNFTRTLKLLSQMRHFGVHLDNVAMLIGLGACSHIGAIRLGKEIHGFTIRHC--YHKLS 360
GN+ L + MR+ V + +VAM+ GL ACSHIGA++ GK H IR C H +
Sbjct: 301 AGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDID 360
Query: 361 NVQNALVTMYARCKDLTRAYSLFRLNDDRSIITWNSMLSGLAHLDRVEEALFLFRELLLF 420
NV+N+L+TMY+RC DL A+ +F+ + S+ TWNS++SG A+ +R EE FL +E+LL
Sbjct: 361 NVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS 420
Query: 421 GLEPNYVTFASILPLCARVADLQHGREFHCYITKREDFRDYLLLWNALVDMYARSGKVLE 480
G PN++T ASILPL ARV +LQHG+EFHCYI +R+ ++D L+LWN+LVDMYA+SG+++
Sbjct: 421 GFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIA 480
Query: 481 AKRVFDSLNKKDEVTYTSLIAGYGMQGEGSKALRLFKEMKELRIKPDHITMVAVLSACSH 540
AKRVFDS+ K+D+VTYTSLI GYG G+G AL FK+M IKPDH+TMVAVLSACSH
Sbjct: 481 AKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSH 540
Query: 541 SGLVKPGELLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITSMPYRPTTAMWA 600
S LV+ G LF +M+ V G+ RLEHY+CM DL+ R G L+KA++I ++PY P++AM A
Sbjct: 541 SNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCA 600
Query: 601 TLIGACCIHENTDIGKWAAEK-LLEMRPEHSGYYVLIANMYAAAGSWSELAKIRTLMRDS 657
TL+ AC IH NT+IG+WAA+K LLE +PEH G+Y+L+A+MYA GSWS+L ++TL+ D
Sbjct: 601 TLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDL 660
BLAST of Sed0016377 vs. TAIR 10
Match:
AT5G16860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 415.6 bits (1067), Expect = 8.0e-116
Identity = 223/682 (32.70%), Postives = 368/682 (53.96%), Query Frame = 0
Query: 45 SSLKNFASHGQLSKAFEAFSFIQLRTCYNDSFDLILQSISILLVSCNNCSSLPPGKQLHG 104
S ++++ +G +K F + + D++ + + +C SS+ G+ H
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNY-----TFPFVFKACGEISSVRCGESAHA 156
Query: 105 RIISSGLEQDFILVPKLVTFYSSFKLLAEAHTLVENSNLFHPCSWNLLITSYVRNELHEA 164
+ +G + + LV YS + L++A + + +++ SWN +I SY + +
Sbjct: 157 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 216
Query: 165 AILAYKQMLSK-GVLPDNFTFPSILKACGETQNLGFGLEVHKSINAWSNKWSLFVQNALI 224
A+ + +M ++ G PDN T ++L C G ++H ++FV N L+
Sbjct: 217 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 276
Query: 225 SMYGRCGEVDMARNLFDNMLDRDAVSWNSMISCYASKSMWKEAFELFDSMQIKCVEINIV 284
MY +CG +D A +F NM +D VSWN+M++ Y+ +++A LF+ MQ + +++++V
Sbjct: 277 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 336
Query: 285 TWNIVAGGCLRVGNFTRTLKLLSQMRHFGVHLDNVAMLIGLGACSHIGAIRLGKEIHGFT 344
TW+ G + G L + QM G+ + V ++ L C+ +GA+ GKEIH +
Sbjct: 337 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 396
Query: 345 IRHCYHKLSN-------VQNALVTMYARCKDLTRAYSLF--RLNDDRSIITWNSMLSGLA 404
I++ N V N L+ MYA+CK + A ++F +R ++TW M+ G +
Sbjct: 397 IKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS 456
Query: 405 HLDRVEEALFLFRELLLFGLE--PNYVTFASILPLCARVADLQHGREFHCYITKREDFRD 464
+AL L E+ + PN T + L CA +A L+ G++ H Y + +
Sbjct: 457 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV 516
Query: 465 YLLLWNALVDMYARSGKVLEAKRVFDSLNKKDEVTYTSLIAGYGMQGEGSKALRLFKEMK 524
L + N L+DMYA+ G + +A+ VFD++ K+EVT+TSL+ GYGM G G +AL +F EM+
Sbjct: 517 PLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMR 576
Query: 525 ELRIKPDHITMVAVLSACSHSGLVKPGELLFAEMQSVHGLSPRLEHYACMADLFGRVGLL 584
+ K D +T++ VL ACSHSG++ G F M++V G+SP EHYAC+ DL GR G L
Sbjct: 577 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRL 636
Query: 585 NKAKEIITSMPYRPTTAMWATLIGACCIHENTDIGKWAAEKLLEMRPEHSGYYVLIANMY 644
N A +I MP P +W + C IH ++G++AAEK+ E+ H G Y L++N+Y
Sbjct: 637 NAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 696
Query: 645 AAAGSWSELAKIRTLMRDSGVAKAPGCSWIDIGSGFVSFLVGDTSNPRAL-ASKHLLDSL 704
A AG W ++ +IR+LMR GV K PGCSW++ G +F VGD ++P A + LLD +
Sbjct: 697 ANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHM 756
Query: 705 NDVMKHGSLVTTDYC--DIDDD 712
+ G + T + D+DD+
Sbjct: 757 QRIKDIGYVPETGFALHDVDDE 773
BLAST of Sed0016377 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 407.1 bits (1045), Expect = 2.8e-113
Identity = 218/654 (33.33%), Postives = 361/654 (55.20%), Query Frame = 0
Query: 62 AFSFIQLRTCYNDSFDLILQSISILLVSCNNCSSLPPGKQLHGRIISSGLEQDFILVPKL 121
++ F L + + +D I S+ L+ +NC +L + +H ++I GL + KL
Sbjct: 14 SYPFHFLPSSSDPPYDSIRNHPSLSLL--HNCKTLQSLRIIHAQMIKIGLHNTNYALSKL 73
Query: 122 VTF-------------YSSFKLLAEAHTLVENSNLFHPCSWNLLITSYVRNELHEAAILA 181
+ F S FK + E + L+ WN + + + +A+
Sbjct: 74 IEFCILSPHFEGLPYAISVFKTIQEPNLLI----------WNTMFRGHALSSDPVSALKL 133
Query: 182 YKQMLSKGVLPDNFTFPSILKACGETQNLGFGLEVHKSINAWSNKWSLFVQNALISMYGR 241
Y M+S G+LP+++TFP +LK+C +++ G ++H + L+V +LISMY +
Sbjct: 134 YVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQ 193
Query: 242 CGEVDMARNLFDNMLDRDAVSWNSMISCYASKSMWKEAFELFDSMQIKCVEINIVTWNIV 301
G ++ A +FD RD VS+ ++I YAS+ + A +LFD + +K ++V+WN +
Sbjct: 194 NGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAM 253
Query: 302 AGGCLRVGNFTRTLKLLSQMRHFGVHLDNVAMLIGLGACSHIGAIRLGKEIHGFTIRHCY 361
G GN+ L+L M V D M+ + AC+ G+I LG+++H + H +
Sbjct: 254 ISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGF 313
Query: 362 HKLSNVQNALVTMYARCKDLTRAYSLFRLNDDRSIITWNSMLSGLAHLDRVEEALFLFRE 421
+ NAL+ +Y++C +L A LF + +I+WN+++ G H++ +EAL LF+E
Sbjct: 314 GSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQE 373
Query: 422 LLLFGLEPNYVTFASILPLCARVADLQHGREFHCYITKR-EDFRDYLLLWNALVDMYARS 481
+L G PN VT SILP CA + + GR H YI KR + + L +L+DMYA+
Sbjct: 374 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 433
Query: 482 GKVLEAKRVFDSLNKKDEVTYTSLIAGYGMQGEGSKALRLFKEMKELRIKPDHITMVAVL 541
G + A +VF+S+ K ++ ++I G+ M G + LF M+++ I+PD IT V +L
Sbjct: 434 GDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLL 493
Query: 542 SACSHSGLVKPGELLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITSMPYRPT 601
SACSHSG++ G +F M + ++P+LEHY CM DL G GL +A+E+I M P
Sbjct: 494 SACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPD 553
Query: 602 TAMWATLIGACCIHENTDIGKWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSELAKIRTL 661
+W +L+ AC +H N ++G+ AE L+++ PE+ G YVL++N+YA+AG W+E+AK R L
Sbjct: 554 GVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRAL 613
Query: 662 MRDSGVAKAPGCSWIDIGSGFVSFLVGDTSNPRALASKHLLDSLNDVMKHGSLV 702
+ D G+ K PGCS I+I S F++GD +PR +L+ + +++ V
Sbjct: 614 LNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFV 651
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7025166.1 | 0.0e+00 | 87.10 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022973516.1 | 0.0e+00 | 86.54 | pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita maxi... | [more] |
XP_022925519.1 | 0.0e+00 | 86.68 | pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita mosc... | [more] |
XP_023535485.1 | 0.0e+00 | 86.68 | pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita pepo... | [more] |
XP_022141804.1 | 0.0e+00 | 86.68 | pentatricopeptide repeat-containing protein At1g71490-like [Momordica charantia]... | [more] |
Match Name | E-value | Identity | Description | |
Q9C9I6 | 3.8e-232 | 59.15 | Pentatricopeptide repeat-containing protein At1g71490 OS=Arabidopsis thaliana OX... | [more] |
Q4V389 | 3.9e-200 | 51.43 | Pentatricopeptide repeat-containing protein At1g22830 OS=Arabidopsis thaliana OX... | [more] |
Q9LFL5 | 1.1e-114 | 32.70 | Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX... | [more] |
Q9LN01 | 4.0e-112 | 33.33 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9LNU6 | 1.7e-102 | 31.50 | Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1I8V4 | 0.0e+00 | 86.54 | pentatricopeptide repeat-containing protein At1g71490 isoform X1 OS=Cucurbita ma... | [more] |
A0A6J1EI84 | 0.0e+00 | 86.68 | pentatricopeptide repeat-containing protein At1g71490 isoform X1 OS=Cucurbita mo... | [more] |
A0A6J1CJU8 | 0.0e+00 | 86.68 | pentatricopeptide repeat-containing protein At1g71490-like OS=Momordica charanti... | [more] |
A0A1S3CB12 | 0.0e+00 | 82.33 | pentatricopeptide repeat-containing protein At1g71490 OS=Cucumis melo OX=3656 GN... | [more] |
A0A5D3BN10 | 0.0e+00 | 82.33 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT1G71490.1 | 2.7e-233 | 59.15 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G22830.1 | 2.8e-201 | 51.43 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G22830.2 | 2.8e-201 | 51.43 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G16860.1 | 8.0e-116 | 32.70 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G08070.1 | 2.8e-113 | 33.33 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |