Sed0016358 (gene) Chayote v1

Overview


Name	Sed0016358
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Aminoacyl-tRNA hydrolase
Location	LG01: 2806169 .. 2813034 (-)
RNA-Seq Expression	Sed0016358
Synteny	Sed0016358

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGAAATCTGCAATTTAAAGGTAACGCTTGAAGTAAGGAAAAAAAAAAAAGAGAGAGAGAGAAAAACGCATGTTTTCGGCCCTCGAAGACCAACTTCAGCCGTGGCGGAGTTGTGCTGAACTCCGATCTAAGAATCTTGGCGCCGATCGTCACCTAAATGCAACATAATCTGAATAATCCTCAGCCAACATCTGGTAATGATTTCATCATTCCTTTACACAAAAAGTCTTGAACTCTCTCATGTTTCTATTAAGAACTCTGCATTATTTGAGACGCCATGAAAAACCCAGATTGTTTTATTCAAAGTTGAATATTGGGGGATTCTGTCTGCATAAATGTTTGCTGAGAAATGGGGGGTTTTTGAAAGAAGTTTTTTATAAAATATGATTGGATTGTTTTGCTGCTAGGGCTTCTTGGTTTGACTTTGTTCATTGGTTTGCTTGATTTTGAAGCAGTTTTTTTTTAGCTCTCTTGTCTTGTTATTTGAAAACGCTCTATGGTTAGTTGTGTATTGATGTGTTCTATTTGGTAGATTGGTTAGTTTTTGGCATTATTGGTTTATTGCTGTCTTTGGGTTTCAGATAACTGAATGCCTGAGGGCCCTAACCATTTCTTTTTGGGTGTTTAAATTGTGCTTAATTTTTTTTTTTTTTTTTTAATATCTATGAGCGTCTGGCCGAGGAGATCTCTACCGGCATCTTGTATATAACCTAGCAATCATGAGTTTACAATCGATTCATCGAATACCCCCTTCCCCAAAGATTGTTGAATTAAAAAATCTACATGAGTGTCGGACATCTCGACTATTATCACTTGACAAATAGCTGGACTTTATGACATTGGTTGTTAAGAAAACTCGTTAAAAATTATTTACTAGGTAGTTAGTCCCCATGGATGGAACGCATTGCCACTTAGTTGACCACTGCACCAATTCATGATGGTTAAATTGGGCTTATTTTCTCTTAGTCTTACACCGGTTTTTTCATCTTTTTCAAGTAAGACATTGAATTCTTAGCGATTACAAGTTCTAGAAATAAGTTTTTAGAAACTACTTTATTTTTAGTTTGCATCATTTGGCTTGGATTTTGAAAACATTGGTCAAAACGAAGAAGCTGTGGGTTTGAGTTTATAAGCTTAGTTCTAGAAATCTAAAAGGTAAAACAAAATACCAAATGGTTATCAAAAGGGCCTAGATGAATGACATTCATATTGTCATTAGTGTTCTCTGCAAAGCAAAAGCAAGCAATTTTTTTTCTTTCTAAATTTCATTATCCTGAAGTTGAGGAAATGCCTGTTATTTCCTTCATTCGTATTTGGGGTTTTTTCTTCTTCATACGTTTGGTCTTTTTGAGTGATATAAATGATTGTATTTACTGTTTCTGAGTTTTAATTTTGAGCTTTTCCTGTTCTTTGTAGGATTTGTATTTCTTGAATTTGAATTTGGTATCGGGTCCAGCATTACCCTTGCTGGACTTCAATAGCAGAGCGGTGCATTTTAGAGACTAAGATTGGATGGATCTGACATGGCTGAGTGCCATTGTAGTTGGGGCTGGCTGCCTTGTTTTAGGATACTATGTTGGTTCAAAGTATCCTCCTCACATCTTTATCAAAGCCAAATTAGCCAAAAGCAATGGAACAAGCAAAAGTGGAAAGAAGGATGATAAGCCTAACAAAGGGCCATTGGAGGTTGAAAATTTGGCTGACATTCTTGAGGACTTCAAAATGGTTAGTTCTGTCCATCTCTTCTTCTCCCTAGCTTTGTATTGAATATCTGGTTCACATCCTTAATGATTTTAAGATGTCCTTCCTCTCTAAAAATTGTAATAAGATTTATTGTATTCTGCAGGTTTTAGTTGTGAGAAATGATCTGAAAATGGGCAAAGGAAAAATTGCTGCCCAATGCAGGTACTTTTTTTACGACCTTTTTGGTTTCTCTTTCATTGCTTAACCTTTTTTTTTAGCTCAACAAGGGGATTTGAACCCATAACCTCTTAGACATGAGCACACAGTTGTGCCCGTTGGTCTTCTTGGCCTTCAATGGCTTGATGTTTTGAATCAATCAAGGAAATTTTGAATTTTACTGATGCTTACATAATGCGTATGCTTTTTGTTAAAACTAGTCCGAAGTATCTATGGGACACATAGTGTTAGAAGTTTAGTCTTTTGAATAATCGGAACAAACAACAATCAAGAAAATAAAGAAAATGTGAGACAAAGAACACAACAATTTACGTGGTTCACTAATGTCTACAAGCAAAGAAAAGAGCCATTTTATTAAGGAGAATATAAATGTTTGGTCAAATGAGATTAAGGTTTTAAGAGAGTCTATATAGTGGACTCTCATAAAACTCCAGTACAACATATGATCCAAAATACATAAGAGTCCAATACGAAAATGTAAATCCAATTACATATTTCGAATGCCCCTAGCTAAGTAATCTTTGAGCAATGTAGTTCAATGATATTTCAACATTTAGGTTAAAAATGCCTATAATAAATTTTACTAAAATTATTATAGTTATGAGGAATATGGTATAAGTTTTTTTATTATCACCAATGCTACTCACATTTTGTTAGTACTACTTGCGAGACCAAGTTTCCATATTATTTAATTTTAGTATGACTATATAAGTACCGCTTCATTATGCTGTAAATTGGCTAGGACTAGTTTTTAATCTACTTCACTTGCTTTTGTTAGTCATGCAACTTTGGGACTCTATAAGAAGCTCCATTATCGTGCACCGAAAGCGTTGAATAGGTATACATTTACAGAATAGTCCTCCCTATGTTAATGTGCATTGTATACTTTGTTCTCTGCACATGTATTTGATTTTATCTAATATAGGTGGGAGATGTGTGCTCAACCAAAGGTGGTTCTGAAGATAGAAACTGAGGAAGACATGCTAGTTTTGCAAGTAACAATCCCACTATAATTTCCTTTTTCTAAGAATTTCACCATGATTTTATAGTATCTAGCCGTTATTTTGTTATGCTTATCTCAAAAGGATATCATATTTGCAGTGGGGTTGATGTCTGTTAGTTTTTCTAGCCTGTTGTATGTTTAGATTTATGTTTATTGGGGGTGTAAGCACTAAGCAGGTTAATTTGAGTTTTTTTTTCCATCAGTTTTAGCTTCCACTCTGCTAATACCCTTCATATTTATGAAAATATTTGTTGTTTTACTCTCTTAATTGTTCTTGTACTTCCTTCTGGTTCAATTGCTTCATTCTTTAGATCTTATTTCTAAAACCAACCAGACCATTGTGCCTAAAAAATTGAAAGAGCTGAAATTCCTTCTACTGTTTATTTCTGGATAGACTTCTTTACGATCTTTCTTCCTTTTCTTCCTCGTAATTGTTCATTATAGTCGAGACAATTAAATACAAAGTGGTCAAAGAGGGCCTTGAGAATGTAAGAGGTAATGAGTTCAATCCACAGTGGTCTACCTAAAAAAAAACTCCCTACGGGTTTCCTTGGACTTTAATATCCAAATTATATAGGGGTATGCTCTCTTCAAAGTCTCAGGTTCGAGACTCACCTGTGACATTACTCCTTCGATGTCTCCCGGTGCCTGGCCTAGGGATGGGCGTGGTTACCCTTGTTTCAAAAAGAATATATCCAAATAATATAGGGTTAGGCGGTAAGTCCCATAAAAATAGTCGAGTTGTATATAAACTGGTTTGAACCCTCACAAACATCAAAAAGAAAAAAAAAAAGACAACTACTAAATACAGCTGACAAAAGAAGACAACTACTAAATACAGCTTGTCCTGTTCTTTGACGCCTTTGAACTCCCTTTAAATCTCTTACTTTTAGCCCTTGATCTTGGTGCTTTTATTTTTCACATTTTTATATGTTATTGTACATCAGGAGAGGGCAAAATCATTGAGGCTACCAACTCATATTACCATTGATGCTGGAAGAACTCAGATTGCTCCAAGTAAGTTCTGCGAAATTCACTTAAATAGATCAAACTTTTTCTTATCAAATTTGTCAAGTTTACCAGCTTAACTTTTCTGTTCTTTCAGATTCGAGAACAGTGATGGCAATTCTTGGTGAGTGAGAATCTTTTCCTTGCAACCTTTATATATTAATGAAATGAAAGAGTTTTCTCATTGCTGCCCTAGACAATTTAAACATATTCCTTTTTAGCAAAATTTCTCAAATGCGATGAAAAGATCATATTCCTTTTTAGCAAAATTTCTCAAATGTGATGAAAAGATCATTCAGACGAATTTTGAGATAAACTTTCAAGACGATTTTTGAAAGATTGCTATTATAATTATATTTACTCCAACCCATCCACTTAAGTTTGATGATTTAACATAATTTAACATGATATCAAAGTGAAGTGTTTCTCGATTAATATTAATTTTCACTTAGGTATTTCTCAAATTTTGAAGCCCACAAGTGAGAAGAGTGATAGTTGATATAATTAAATTTACTCAAATTCATCAACTTAAACTCTTGGGTTGATTGATGATTTAATATATTACATTACAACATGGTCTTAGAGAATGAAATCATGTGTTCAAACCCTTGTCAAGTAATTTCCTCCCCAATTTAATATTGATTTTGTTGAATTATGTTAAACCATCAATCAATCCAAAAGCTTAAGCTCATGGATTGGGGTAAATTTAATTATATCAACCAACACTCCCCCTCACTTGTGGGCTTTGAAATTTGAGAAATTCCCTACAAGTGGACTTTAATTTTAATTGGGGTTGAAATGACTTGGCAGGGATTCGAACTCATGACCTCCTGCTCTGATACCATATTAGAGAATATGAGGTTTCACCTCAAAACCAATTAGCAATGAGGGGAGTAACTCATATCTCTTATAAATGTGTTGAAGAATCCTCACCTTATCAATGTGGGATAATTGCACCACAAGTGAAAGTATCTCCAACATGCCCCCTCAAGATGGCGGCCATATTTTGGGAAATGCCATCTTGAATTGGATCCGGATTTGTGCCTGAAATACCCGCTTTGGCTTACTCTTTGCCCGCTTGGGTGGGGTCCACACCCGCTTTTTTGAATTCAAAGCATTTTTGGGTTGGATCGGAATTTGGGGACTAATACCCACATTAAGCTCTGATACCATATTGAATTATGTTAAACTACCAATCAATCCAAAAGTCTAAGCTCATGGATTGGGGTAAATTTAATTATATCAACCAACAGCTTAGGCTTTTGGATTGATTGGTAGTTTAACATAATTTAATATGGTATCAGAGCCCATTAAGCCTAAGTCCAAACGGGTATTTGGTCCAATAAAAATGAAATTGAGATCCGATTCAAGATTGGTGAGCCCAAAAGAGGCACCATCTTGAGGGGGCATGTTGAGAATCTCACATTGATAAGTTGAGGATATTTCAAAGTGTTTAAAAGGTAGGTGGACCACTCCTCTCATCACCAATTGGTTTTGAGATGGATGTCCACACTCTTTCACATGGTATCAGAGCAGGAGGTCATGAGTTCAAATCTTTGCCAAGTCGTTTCCTCCCCAATTAAAATTAAATTCCACTTGTCTCATTTCTCAAATTTCAAAGCCCACAAGTGAGGGGGAGTGTTGGTTGATATAATTAAATTTGCCCAAATCCATCAGCTTAGGCTTTTGGATTGATTGGTAGTTTAACATAATTCAACAGATTTTCACTTGATGGACATTCTCAAATTTCCAAGCCGACAAGGAGGAGTATTGGTTGATATAATTAAATTTACCCAGACATTGATTGGTGATTTAGCATAATTCAACCGTTTCTTTCATAATAGCAAATACCCTAGTTTTATTTTATAATTAATTTATTTGTTCTGTCGCATGTTTGGTTAGCTTAACTGGTTGAACTACTGAACGGTTTCATTTTGGTGCATTAGCTAACTTGGTTCACCCGTATGGATTAAGACACTTCTTACTTCACAAATTGCAGGTCCTGTTGAAGTGGTAGATGATGTAACTGGTGGGTTGAAACTCTTGTAGTTTCTAACTTCTTGACTGTTATCAGCTCAAATTTCTTGAAGATTTCAGCTCTGTAGCAAAAAGCTCCGCAAAATCCATCTGTGCTTGGACCATCTATGCGAAACCGATCTGCGTAGATCTCTGAGTTTTCGTGATACTCTGACCATTTCTGATGATGACAATGACGACATCGATAATCTTAGGTAATCTATTTCTTATGGATTCAAGTCTGATTATATATACCAGAACAATTGGGAAGTTCTTGGATTATCTTGTTAAGAACTATATTCTGTTCAAACGCTTCTGGTTTTATCTTTATGAAAATTAGAAATCTACTTCCGAGGATATAATTCTAAGCATGTTGAACTATTCTTATTAGTTGAAAGAATGAATACACTGAAAAAACAAAAACTCACAATATCAAGATATGCATCTGCACACACATCTCATAGGAAGAGAAGTCTATGAAGAAAATAAAAGTCTTCTATTCAAACAGGGCTTGCTTCATCTTCCTCCATTAGAGTTAACTGATCAAATCTGACTGTTGTTTCTATAAATTTCATATGCAATGCTTACTATCTAAACATACCTTAAGTAGAAGCTTCTTTCCCATCATCTCTTTCACAATCATATAACTTTGAAACAAAATATATTGTTTTTCTAAAGGGTTTTGTATTGTTTTTTATCCCAGAATATGGCTTTCAGAACTCCAAGCATGATCAAGAGAATCTTACGTAATTAAGAGATGATGAGTTCAATTTATGACGACTGTCTTTTTAGAAATTAATTTCGTACTGATTTTCTTGACATTCAAATATTGTATGGTTAAATGGTACGTCCTATAATAATAGTTGAGATATGTAAAGCTGACCATGATAGTCATATATATATATATATAAAAGATTAG

mRNA sequence

CCGAAATCTGCAATTTAAAGGTAACGCTTGAAGTAAGGAAAAAAAAAAAAGAGAGAGAGAGAAAAACGCATGTTTTCGGCCCTCGAAGACCAACTTCAGCCGTGGCGGAGTTGTGCTGAACTCCGATCTAAGAATCTTGGCGCCGATCGTCACCTAAATGCAACATAATCTGAATAATCCTCAGCCAACATCTGGATTTGTATTTCTTGAATTTGAATTTGGTATCGGGTCCAGCATTACCCTTGCTGGACTTCAATAGCAGAGCGGTGCATTTTAGAGACTAAGATTGGATGGATCTGACATGGCTGAGTGCCATTGTAGTTGGGGCTGGCTGCCTTGTTTTAGGATACTATGTTGGTTCAAAGTATCCTCCTCACATCTTTATCAAAGCCAAATTAGCCAAAAGCAATGGAACAAGCAAAAGTGGAAAGAAGGATGATAAGCCTAACAAAGGGCCATTGGAGGTTGAAAATTTGGCTGACATTCTTGAGGACTTCAAAATGGTTTTAGTTGTGAGAAATGATCTGAAAATGGGCAAAGGAAAAATTGCTGCCCAATGCAGTCATGCAACTTTGGGACTCTATAAGAAGCTCCATTATCGTGCACCGAAAGCGTTGAATAGGTGGGAGATGTGTGCTCAACCAAAGGTGGTTCTGAAGATAGAAACTGAGGAAGACATGCTAGTTTTGCAAGAGAGGGCAAAATCATTGAGGCTACCAACTCATATTACCATTGATGCTGGAAGAACTCAGATTGCTCCAAATTCGAGAACAGTGATGGCAATTCTTGGTCCTGTTGAAGTGGTAGATGATGTAACTGGTGGGTTGAAACTCTTGTAGTTTCTAACTTCTTGACTGTTATCAGCTCAAATTTCTTGAAGATTTCAGCTCTGTAGCAAAAAGCTCCGCAAAATCCATCTGTGCTTGGACCATCTATGCGAAACCGATCTGCGTAGATCTCTGAGTTTTCGTGATACTCTGACCATTTCTGATGATGACAATGACGACATCGATAATCTTAGAATATGGCTTTCAGAACTCCAAGCATGATCAAGAGAATCTTACGTAATTAAGAGATGATGAGTTCAATTTATGACGACTGTCTTTTTAGAAATTAATTTCGTACTGATTTTCTTGACATTCAAATATTGTATGGTTAAATGGTACGTCCTATAATAATAGTTGAGATATGTAAAGCTGACCATGATAGTCATATATATATATATATAAAAGATTAG

Coding sequence (CDS)

ATGGATCTGACATGGCTGAGTGCCATTGTAGTTGGGGCTGGCTGCCTTGTTTTAGGATACTATGTTGGTTCAAAGTATCCTCCTCACATCTTTATCAAAGCCAAATTAGCCAAAAGCAATGGAACAAGCAAAAGTGGAAAGAAGGATGATAAGCCTAACAAAGGGCCATTGGAGGTTGAAAATTTGGCTGACATTCTTGAGGACTTCAAAATGGTTTTAGTTGTGAGAAATGATCTGAAAATGGGCAAAGGAAAAATTGCTGCCCAATGCAGTCATGCAACTTTGGGACTCTATAAGAAGCTCCATTATCGTGCACCGAAAGCGTTGAATAGGTGGGAGATGTGTGCTCAACCAAAGGTGGTTCTGAAGATAGAAACTGAGGAAGACATGCTAGTTTTGCAAGAGAGGGCAAAATCATTGAGGCTACCAACTCATATTACCATTGATGCTGGAAGAACTCAGATTGCTCCAAATTCGAGAACAGTGATGGCAATTCTTGGTCCTGTTGAAGTGGTAGATGATGTAACTGGTGGGTTGAAACTCTTGTAG

Protein sequence

MDLTWLSAIVVGAGCLVLGYYVGSKYPPHIFIKAKLAKSNGTSKSGKKDDKPNKGPLEVENLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVLKIETEEDMLVLQERAKSLRLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL

Homology

[Close]

BLAST of Sed0016358 vs. NCBI nr
Match: XP_038901927.1 (peptidyl-tRNA hydrolase 2, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 329.3 bits (843), Expect = 2.1e-86
Identity = 166/182 (91.21%), Postives = 175/182 (96.15%), Query Frame = 0


Query: 1   MDLTWLSAIVVGAGCLVLGYYVGSKYPPHIFIKAKLAKSNGTSKSGKKDDKPNKGPLEVE 60
           MDL WLSAIVVGAGCLVLGYY+GSKYPP IF++AKLAKSN + ++GKK DKP K PLEVE
Sbjct: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRIFVRAKLAKSNESGRNGKKKDKP-KEPLEVE 60

Query: 61  NLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV 120
           NLADIL+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV
Sbjct: 61  NLADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV 120

Query: 121 VLKIETEEDMLVLQERAKSLRLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK 180
           VLKIE+EEDMLVLQERAKSL+LPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK
Sbjct: 121 VLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK 180

Query: 181 LL 183
           LL
Sbjct: 181 LL 181

[Close]

BLAST of Sed0016358 vs. NCBI nr
Match: XP_004148093.1 (peptidyl-tRNA hydrolase 2, mitochondrial [Cucumis sativus] >XP_008459200.1 PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucumis melo] >KAA0042983.1 peptidyl-tRNA hydrolase 2 [Cucumis melo var. makuwa] >KGN63396.1 hypothetical protein Csa_022142 [Cucumis sativus])

HSP 1 Score: 328.9 bits (842), Expect = 2.7e-86
Identity = 166/182 (91.21%), Postives = 175/182 (96.15%), Query Frame = 0


Query: 1   MDLTWLSAIVVGAGCLVLGYYVGSKYPPHIFIKAKLAKSNGTSKSGKKDDKPNKGPLEVE 60
           MDL WLSAIVVGAGCLVLGYY+GSKYPP +F+KAKLAKSN +S++GKK DK  K PLEVE
Sbjct: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDK-TKEPLEVE 60

Query: 61  NLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV 120
           NLADIL+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV
Sbjct: 61  NLADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV 120

Query: 121 VLKIETEEDMLVLQERAKSLRLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK 180
           VLKIE+EEDMLVLQERAKSL+LPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK
Sbjct: 121 VLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK 180

Query: 181 LL 183
           LL
Sbjct: 181 LL 181

[Close]

BLAST of Sed0016358 vs. NCBI nr
Match: KAG7035146.1 (Peptidyl-tRNA hydrolase 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 170/182 (93.41%), Postives = 175/182 (96.15%), Query Frame = 0


Query: 1   MDLTWLSAIVVGAGCLVLGYYVGSKYPPHIFIKAKLAKSNGTSKSGKKDDKPNKGPLEVE 60
           MDLTWLSAIVVGAGCLVLGY +GSKYPP IFIKAKLAKSN +S+SGKK  KP K PLEVE
Sbjct: 1   MDLTWLSAIVVGAGCLVLGYCIGSKYPPRIFIKAKLAKSNESSRSGKK-GKP-KEPLEVE 60

Query: 61  NLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV 120
           NLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV
Sbjct: 61  NLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV 120

Query: 121 VLKIETEEDMLVLQERAKSLRLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK 180
           VLKIE+EEDMLVLQERAKSL+LPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK
Sbjct: 121 VLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK 180

Query: 181 LL 183
           LL
Sbjct: 181 LL 180

[Close]

BLAST of Sed0016358 vs. NCBI nr
Match: XP_022947215.1 (peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucurbita moschata] >XP_022947216.1 peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucurbita moschata] >XP_022947217.1 peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 325.5 bits (833), Expect = 3.0e-85
Identity = 169/182 (92.86%), Postives = 175/182 (96.15%), Query Frame = 0


Query: 1   MDLTWLSAIVVGAGCLVLGYYVGSKYPPHIFIKAKLAKSNGTSKSGKKDDKPNKGPLEVE 60
           MDLTWLSAIVVGAGCLVLGY +GSKYPP IFIKAKLAKSN +S++GKK  KP K PLEVE
Sbjct: 1   MDLTWLSAIVVGAGCLVLGYCIGSKYPPRIFIKAKLAKSNESSRTGKK-GKP-KEPLEVE 60

Query: 61  NLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV 120
           NLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV
Sbjct: 61  NLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV 120

Query: 121 VLKIETEEDMLVLQERAKSLRLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK 180
           VLKIE+EEDMLVLQERAKSL+LPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK
Sbjct: 121 VLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK 180

Query: 181 LL 183
           LL
Sbjct: 181 LL 180

[Close]

BLAST of Sed0016358 vs. NCBI nr
Match: XP_023533748.1 (peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023533749.1 peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023533750.1 peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 325.1 bits (832), Expect = 3.9e-85
Identity = 168/182 (92.31%), Postives = 173/182 (95.05%), Query Frame = 0


Query: 1   MDLTWLSAIVVGAGCLVLGYYVGSKYPPHIFIKAKLAKSNGTSKSGKKDDKPNKGPLEVE 60
           MDLTWLSAIVVGAGCLVLGY +GSKYPP IFIKAKLAKSN +S+SGKK     K PLEVE
Sbjct: 1   MDLTWLSAIVVGAGCLVLGYCIGSKYPPRIFIKAKLAKSNESSRSGKKGKA--KEPLEVE 60

Query: 61  NLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV 120
           NLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV
Sbjct: 61  NLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV 120

Query: 121 VLKIETEEDMLVLQERAKSLRLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK 180
           VLKIE+EEDMLVLQERAKSL+LPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK
Sbjct: 121 VLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK 180

Query: 181 LL 183
           LL
Sbjct: 181 LL 180

[Close]

BLAST of Sed0016358 vs. ExPASy Swiss-Prot
Match: Q9Y3E5 (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo sapiens OX=9606 GN=PTRH2 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.2e-30
Identity = 72/135 (53.33%), Postives = 92/135 (68.15%), Query Frame = 0


Query: 51  KPNKGPLEVENLADILED---FKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPK 110
           K +K   + E+ A IL D   +KM+LVVRNDLKMGKGK+AAQCSHA +  YK++  R P+
Sbjct: 44  KTSKTHTDTESEASILGDSGEYKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPE 103

Query: 111 ALNRWEMCAQPKVVLKIETEEDMLVLQERAKSLRLPTHITIDAGRTQIAPNSRTVMAI-L 170
            L +WE C QPKVV+K   EE ++ L   AK L L   +  DAGRTQIAP S+TV+ I  
Sbjct: 104 MLKQWEYCGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGRTQIAPGSQTVLGIGP 163

Query: 171 GPVEVVDDVTGGLKL 182
           GP +++D VTG LKL
Sbjct: 164 GPADLIDKVTGHLKL 178

[Close]

BLAST of Sed0016358 vs. ExPASy Swiss-Prot
Match: Q8R2Y8 (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus OX=10090 GN=Ptrh2 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.4e-29
Identity = 65/115 (56.52%), Postives = 83/115 (72.17%), Query Frame = 0


Query: 68  DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVLKIETE 127
           ++KM+LVVR DLKMGKGK+AAQCSHA +  YK+   R+P+ L  WE C QPKVV+K   E
Sbjct: 66  EYKMILVVRTDLKMGKGKVAAQCSHAAVSAYKQTQRRSPQVLKEWEYCGQPKVVVKAPDE 125

Query: 128 EDMLVLQERAKSLRLPTHITIDAGRTQIAPNSRTVMAI-LGPVEVVDDVTGGLKL 182
           + ++ L   AK+L L   +  DAGRTQI P SRTV+ I  GPVE++D+VTG LKL
Sbjct: 126 DTLIQLLTHAKTLGLTVSLIQDAGRTQIEPGSRTVLGIGPGPVELIDEVTGHLKL 180

[Close]

BLAST of Sed0016358 vs. ExPASy Swiss-Prot
Match: Q3ZBL5 (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus OX=9913 GN=PTRH2 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 7.0e-29
Identity = 73/142 (51.41%), Postives = 92/142 (64.79%), Query Frame = 0


Query: 44  KSGKKDDKPNKGPLEVENLADIL---EDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKK 103
           KS  ++  P     + E  A IL    ++KM+LVVRNDLKMGKGK+AAQCSHA +  YK+
Sbjct: 42  KSSVRETNP-----DTETEASILGESGEYKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQ 101

Query: 104 LHYRAPKALNRWEMCAQPKVVLKIETEEDMLVLQERAKSLRLPTHITIDAGRTQIAPNSR 163
           +  R P+ L  WE C QPKVV+K   EE ++ L   AK L L   +  DAGRTQIAP SR
Sbjct: 102 IQRRNPELLKEWEYCGQPKVVVKAPDEETLVELLTHAKVLGLTVSLIQDAGRTQIAPGSR 161

Query: 164 TVMAI-LGPVEVVDDVTGGLKL 182
           TV+ I  GP +++D VTG LKL
Sbjct: 162 TVLGIGPGPADLIDKVTGHLKL 178

[Close]

BLAST of Sed0016358 vs. ExPASy Swiss-Prot
Match: O97067 (Probable peptidyl-tRNA hydrolase 2 OS=Drosophila melanogaster OX=7227 GN=CG1307 PE=2 SV=2)

HSP 1 Score: 115.5 bits (288), Expect = 6.1e-25
Identity = 68/181 (37.57%), Postives = 109/181 (60.22%), Query Frame = 0


Query: 10  VVGAGCLVLGYYVGSKYPPHIFIK---AKLAKSNGTSKSGKKDDKPNKG---PLEVENLA 69
           ++    ++L ++VG +Y     +K   AK + + G +    ++   + G    +  +   
Sbjct: 11  IINGLAVMLSFFVGYRYA----LKRGDAKDSVTEGAATPFSQESSVSSGSEASVSDKGYG 70

Query: 70  DILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVLK 129
            + ++FKMVLVVRNDLKMGKGKIAAQC H  +G Y++   R P+ L  WE C   K+ ++
Sbjct: 71  GLNDNFKMVLVVRNDLKMGKGKIAAQCGHGAVGAYQRAVVRTPRLLRSWENCGCAKIAVR 130

Query: 130 IETEEDMLVLQERAKSLRLPTHITIDAGRTQIAPNSRTVMAILGPVEV--VDDVTGGLKL 183
           +E+E +++ +++ A+  +L T +  DAGRTQI  NS+TV+A+ GP     +D VTG LKL
Sbjct: 131 VESEAELMAIKKEAERQQLNTCLIRDAGRTQIEANSKTVLAV-GPAAAADIDRVTGHLKL 186

[Close]

BLAST of Sed0016358 vs. ExPASy Swiss-Prot
Match: O13830 (Probable peptidyl-tRNA hydrolase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC19A8.14 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.0e-23
Identity = 81/199 (40.70%), Postives = 105/199 (52.76%), Query Frame = 0


Query: 7   SAIVVGAGCLVLGYYVGSKYPPHIFIKAKLAKSNGTSKSGKKDDKPNK-GPLEVEN---- 66
           +A++VGA   V+G+ +G KY          A    +SK+  K   P K  P+ V N    
Sbjct: 15  AAVLVGA---VVGFMIGRKY------SVADASRGYSSKNANKASNPEKESPVSVSNDEDS 74

Query: 67  -----LADILE-------------DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHY 126
                L D+L+               KMVLVVR DL M KGKIAAQC+HA L  YK    
Sbjct: 75  ESETELLDMLKGNSSLAALALAEGQTKMVLVVRTDLGMTKGKIAAQCAHAALACYKIASA 134

Query: 127 RAPKALNRWEMCAQPKVVLKIETEEDMLVLQERAKSLRLPTHITIDAGRTQIAPNSRTVM 182
             P  +  WE   Q K+ L+ +TEE + +LQ +A SL L   +  DAGRTQIA  S TV+
Sbjct: 135 VDPDLVRIWENAGQAKITLQAQTEETLELLQAQAMSLGLCARVIHDAGRTQIASGSATVL 194

[Close]

BLAST of Sed0016358 vs. ExPASy TrEMBL
Match: A0A5A7TI30 (Aminoacyl-tRNA hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00570 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.3e-86
Identity = 166/182 (91.21%), Postives = 175/182 (96.15%), Query Frame = 0


Query: 1   MDLTWLSAIVVGAGCLVLGYYVGSKYPPHIFIKAKLAKSNGTSKSGKKDDKPNKGPLEVE 60
           MDL WLSAIVVGAGCLVLGYY+GSKYPP +F+KAKLAKSN +S++GKK DK  K PLEVE
Sbjct: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDK-TKEPLEVE 60

Query: 61  NLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV 120
           NLADIL+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV
Sbjct: 61  NLADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV 120

Query: 121 VLKIETEEDMLVLQERAKSLRLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK 180
           VLKIE+EEDMLVLQERAKSL+LPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK
Sbjct: 121 VLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK 180

Query: 181 LL 183
           LL
Sbjct: 181 LL 181

[Close]

BLAST of Sed0016358 vs. ExPASy TrEMBL
Match: A0A0A0LTR6 (Aminoacyl-tRNA hydrolase OS=Cucumis sativus OX=3659 GN=Csa_2G437060 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.3e-86
Identity = 166/182 (91.21%), Postives = 175/182 (96.15%), Query Frame = 0


Query: 1   MDLTWLSAIVVGAGCLVLGYYVGSKYPPHIFIKAKLAKSNGTSKSGKKDDKPNKGPLEVE 60
           MDL WLSAIVVGAGCLVLGYY+GSKYPP +F+KAKLAKSN +S++GKK DK  K PLEVE
Sbjct: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDK-TKEPLEVE 60

Query: 61  NLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV 120
           NLADIL+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV
Sbjct: 61  NLADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV 120

Query: 121 VLKIETEEDMLVLQERAKSLRLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK 180
           VLKIE+EEDMLVLQERAKSL+LPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK
Sbjct: 121 VLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK 180

Query: 181 LL 183
           LL
Sbjct: 181 LL 181

[Close]

BLAST of Sed0016358 vs. ExPASy TrEMBL
Match: A0A1S3C945 (Aminoacyl-tRNA hydrolase OS=Cucumis melo OX=3656 GN=LOC103498393 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.3e-86
Identity = 166/182 (91.21%), Postives = 175/182 (96.15%), Query Frame = 0


Query: 1   MDLTWLSAIVVGAGCLVLGYYVGSKYPPHIFIKAKLAKSNGTSKSGKKDDKPNKGPLEVE 60
           MDL WLSAIVVGAGCLVLGYY+GSKYPP +F+KAKLAKSN +S++GKK DK  K PLEVE
Sbjct: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDK-TKEPLEVE 60

Query: 61  NLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV 120
           NLADIL+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV
Sbjct: 61  NLADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV 120

Query: 121 VLKIETEEDMLVLQERAKSLRLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK 180
           VLKIE+EEDMLVLQERAKSL+LPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK
Sbjct: 121 VLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK 180

Query: 181 LL 183
           LL
Sbjct: 181 LL 181

[Close]

BLAST of Sed0016358 vs. ExPASy TrEMBL
Match: A0A6J1G686 (Aminoacyl-tRNA hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111451148 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.4e-85
Identity = 169/182 (92.86%), Postives = 175/182 (96.15%), Query Frame = 0


Query: 1   MDLTWLSAIVVGAGCLVLGYYVGSKYPPHIFIKAKLAKSNGTSKSGKKDDKPNKGPLEVE 60
           MDLTWLSAIVVGAGCLVLGY +GSKYPP IFIKAKLAKSN +S++GKK  KP K PLEVE
Sbjct: 1   MDLTWLSAIVVGAGCLVLGYCIGSKYPPRIFIKAKLAKSNESSRTGKK-GKP-KEPLEVE 60

Query: 61  NLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV 120
           NLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV
Sbjct: 61  NLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV 120

Query: 121 VLKIETEEDMLVLQERAKSLRLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK 180
           VLKIE+EEDMLVLQERAKSL+LPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK
Sbjct: 121 VLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK 180

Query: 181 LL 183
           LL
Sbjct: 181 LL 180

[Close]

BLAST of Sed0016358 vs. ExPASy TrEMBL
Match: A0A6J1L379 (Aminoacyl-tRNA hydrolase OS=Cucurbita maxima OX=3661 GN=LOC111499994 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 7.1e-85
Identity = 168/182 (92.31%), Postives = 174/182 (95.60%), Query Frame = 0


Query: 1   MDLTWLSAIVVGAGCLVLGYYVGSKYPPHIFIKAKLAKSNGTSKSGKKDDKPNKGPLEVE 60
           MDLTWLSAIVVGAGCLVLGY + SKYPP IFIKAKLAKSN +S+SGKK  KP K PLE+E
Sbjct: 1   MDLTWLSAIVVGAGCLVLGYCIRSKYPPRIFIKAKLAKSNESSRSGKK-GKP-KEPLEIE 60

Query: 61  NLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV 120
           NLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV
Sbjct: 61  NLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV 120

Query: 121 VLKIETEEDMLVLQERAKSLRLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK 180
           VLKIE+EEDMLVLQERAKSL+LPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK
Sbjct: 121 VLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK 180

Query: 181 LL 183
           LL
Sbjct: 181 LL 180

[Close]

BLAST of Sed0016358 vs. TAIR 10
Match: AT5G16870.1 (Peptidyl-tRNA hydrolase II (PTH2) family protein )

HSP 1 Score: 238.8 bits (608), Expect = 3.4e-63
Identity = 132/184 (71.74%), Postives = 148/184 (80.43%), Query Frame = 0


Query: 1   MDLTWLSAIVVGAGCLVLGYYVGSKYPPHIFIKAKLAKSNGTSKSGKKDDK--PNKGPLE 60
           MDLTWLSA++VGA    LGY +G++            +S     +  KD K   +K PLE
Sbjct: 1   MDLTWLSALIVGA---ALGYCIGTR------------RSKPVVAAVDKDIKTQSSKSPLE 60

Query: 61  VENLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQP 120
           +E LADIL+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKL  RAPKAL+ WE CAQP
Sbjct: 61  IEKLADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLVRRAPKALDCWEECAQP 120

Query: 121 KVVLKIETEEDMLVLQERAKSLRLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGG 180
           KVV+KIE E++ML LQERAKSL+LPTHITIDAGRTQIAPNSRTVMAILGPVEVVD+VTGG
Sbjct: 121 KVVVKIEDEDEMLELQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDEVTGG 169

Query: 181 LKLL 183
           LKLL
Sbjct: 181 LKLL 169

[Close]

BLAST of Sed0016358 vs. TAIR 10
Match: AT3G03010.1 (Peptidyl-tRNA hydrolase II (PTH2) family protein )

HSP 1 Score: 236.5 bits (602), Expect = 1.7e-62
Identity = 128/184 (69.57%), Postives = 149/184 (80.98%), Query Frame = 0


Query: 1   MDLTW-LSAIVVGAGCLVLGYYVGS-KYPPHIFIKAKLAKSNGTSKSGKKDDKPNKGPLE 60
           MDL W LS ++VGA    LGYY+ + +    IF+ +K    +  S   KK    +K PLE
Sbjct: 1   MDLVWLLSVLLVGA---ALGYYISTLRQTRRIFLSSKSVAIDAGSSGNKK--TKSKEPLE 60

Query: 61  VENLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQP 120
           +E LAD  ++FKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKL  RAPKALNRWE CAQP
Sbjct: 61  IEKLADFRKNFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLQRAPKALNRWEYCAQP 120

Query: 121 KVVLKIETEEDMLVLQERAKSLRLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGG 180
           KVV+KIE+EE+MLVLQERAK+L+LPTHITIDAG+TQIAPNSRTVMAILGPV+ VD+VTGG
Sbjct: 121 KVVVKIESEEEMLVLQERAKTLKLPTHITIDAGKTQIAPNSRTVMAILGPVDNVDEVTGG 179

Query: 181 LKLL 183
           LKL+
Sbjct: 181 LKLM 179

[Close]

BLAST of Sed0016358 vs. TAIR 10
Match: AT3G03010.2 (Peptidyl-tRNA hydrolase II (PTH2) family protein )

HSP 1 Score: 236.5 bits (602), Expect = 1.7e-62
Identity = 128/184 (69.57%), Postives = 149/184 (80.98%), Query Frame = 0


Query: 1   MDLTW-LSAIVVGAGCLVLGYYVGS-KYPPHIFIKAKLAKSNGTSKSGKKDDKPNKGPLE 60
           MDL W LS ++VGA    LGYY+ + +    IF+ +K    +  S   KK    +K PLE
Sbjct: 1   MDLVWLLSVLLVGA---ALGYYISTLRQTRRIFLSSKSVAIDAGSSGNKK--TKSKEPLE 60

Query: 61  VENLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQP 120
           +E LAD  ++FKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKL  RAPKALNRWE CAQP
Sbjct: 61  IEKLADFRKNFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLQRAPKALNRWEYCAQP 120

Query: 121 KVVLKIETEEDMLVLQERAKSLRLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGG 180
           KVV+KIE+EE+MLVLQERAK+L+LPTHITIDAG+TQIAPNSRTVMAILGPV+ VD+VTGG
Sbjct: 121 KVVVKIESEEEMLVLQERAKTLKLPTHITIDAGKTQIAPNSRTVMAILGPVDNVDEVTGG 179

Query: 181 LKLL 183
           LKL+
Sbjct: 181 LKLM 179

[Close]

BLAST of Sed0016358 vs. TAIR 10
Match: AT4G32900.2 (Peptidyl-tRNA hydrolase II (PTH2) family protein )

HSP 1 Score: 111.7 bits (278), Expect = 6.3e-25
Identity = 58/117 (49.57%), Postives = 80/117 (68.38%), Query Frame = 0


Query: 67  EDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVLKIET 126
           ++ KMVLVVR DLKM  GKIA+QC+HA  G+Y +L       L RWE   QPK+V+  + 
Sbjct: 77  QELKMVLVVRQDLKMRTGKIASQCAHAATGMYAELMQSDRYLLRRWEENGQPKIVVTCKN 136

Query: 127 EEDMLVLQERAKSLRLPTHITIDAGRTQIAPNSRTVMAI-LGPVEVVDDVTGGLKLL 183
           +++M  + E A+S+ LPT +  DAGRT++A  SRTV+A+  GP E+VD +TG L LL
Sbjct: 137 QQEMNKITEAAESVGLPTFVVADAGRTEVAAGSRTVLAVGPGPKELVDSITGRLALL 193

[Close]

BLAST of Sed0016358 vs. TAIR 10
Match: AT4G32900.1 (Peptidyl-tRNA hydrolase II (PTH2) family protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.3e-11
Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 67  EDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVLKIET 126
           ++ KMVLVVR DLKM  GKIA+QC+HA  G+Y +L       L RWE   QPK+V+  + 
Sbjct: 77  QELKMVLVVRQDLKMRTGKIASQCAHAATGMYAELMQSDRYLLRRWEENGQPKIVVTCKN 136

Query: 127 EEDM 131
           +++M
Sbjct: 137 QQEM 140

The following BLAST results are available for this feature:

BLAST of Sed0016358 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901927.1	2.1e-86	91.21	peptidyl-tRNA hydrolase 2, mitochondrial-like [Benincasa hispida]	[more]
XP_004148093.1	2.7e-86	91.21	peptidyl-tRNA hydrolase 2, mitochondrial [Cucumis sativus] >XP_008459200.1 PREDI...	[more]
KAG7035146.1	1.3e-85	93.41	Peptidyl-tRNA hydrolase 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022947215.1	3.0e-85	92.86	peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucurbita moschata] >XP_022947216...	[more]
XP_023533748.1	3.9e-85	92.31	peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_0...	[more]

BLAST of Sed0016358 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9Y3E5	2.2e-30	53.33	Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo sapiens OX=9606 GN=PTRH2 PE=1 S...	[more]
Q8R2Y8	2.4e-29	56.52	Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus OX=10090 GN=Ptrh2 PE=1 ...	[more]
Q3ZBL5	7.0e-29	51.41	Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus OX=9913 GN=PTRH2 PE=2 SV=...	[more]
O97067	6.1e-25	37.57	Probable peptidyl-tRNA hydrolase 2 OS=Drosophila melanogaster OX=7227 GN=CG1307 ...	[more]
O13830	2.0e-23	40.70	Probable peptidyl-tRNA hydrolase 2 OS=Schizosaccharomyces pombe (strain 972 / AT...	[more]

BLAST of Sed0016358 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TI30	1.3e-86	91.21	Aminoacyl-tRNA hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A0A0LTR6	1.3e-86	91.21	Aminoacyl-tRNA hydrolase OS=Cucumis sativus OX=3659 GN=Csa_2G437060 PE=4 SV=1	[more]
A0A1S3C945	1.3e-86	91.21	Aminoacyl-tRNA hydrolase OS=Cucumis melo OX=3656 GN=LOC103498393 PE=4 SV=1	[more]
A0A6J1G686	1.4e-85	92.86	Aminoacyl-tRNA hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111451148 PE=4 SV=1	[more]
A0A6J1L379	7.1e-85	92.31	Aminoacyl-tRNA hydrolase OS=Cucurbita maxima OX=3661 GN=LOC111499994 PE=4 SV=1	[more]

BLAST of Sed0016358 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16870.1	3.4e-63	71.74	Peptidyl-tRNA hydrolase II (PTH2) family protein	[more]
AT3G03010.1	1.7e-62	69.57	Peptidyl-tRNA hydrolase II (PTH2) family protein	[more]
AT3G03010.2	1.7e-62	69.57	Peptidyl-tRNA hydrolase II (PTH2) family protein	[more]
AT4G32900.2	6.3e-25	49.57	Peptidyl-tRNA hydrolase II (PTH2) family protein	[more]
AT4G32900.1	2.3e-11	48.44	Peptidyl-tRNA hydrolase II (PTH2) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002833	Peptidyl-tRNA hydrolase, PTH2	PFAM	PF01981	PTH2	coord: 70..182 e-value: 1.1E-40 score: 138.6
IPR002833	Peptidyl-tRNA hydrolase, PTH2	TIGRFAM	TIGR00283	TIGR00283	coord: 70..182 e-value: 6.5E-33 score: 111.4
IPR002833	Peptidyl-tRNA hydrolase, PTH2	PANTHER	PTHR12649	PEPTIDYL-TRNA HYDROLASE 2	coord: 3..182
IPR002833	Peptidyl-tRNA hydrolase, PTH2	CDD	cd02430	PTH2	coord: 69..182 e-value: 8.09535E-62 score: 185.42
IPR023476	Peptidyl-tRNA hydrolase II domain superfamily	GENE3D	3.40.1490.10	Bit1	coord: 67..182 e-value: 7.5E-44 score: 150.5
IPR023476	Peptidyl-tRNA hydrolase II domain superfamily	SUPERFAMILY	102462	Peptidyl-tRNA hydrolase II	coord: 68..182
None	No IPR available	PANTHER	PTHR12649:SF19	OSJNBA0060D06.11 PROTEIN	coord: 3..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016358.3	Sed0016358.3	mRNA
Sed0016358.1	Sed0016358.1	mRNA
Sed0016358.2	Sed0016358.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0004045	aminoacyl-tRNA hydrolase activity