Sed0016251 (gene) Chayote v1

Overview


Name	Sed0016251
Type	gene
Organism	Sechium edule (Chayote v1)
Description	AP-4 complex subunit mu-like
Location	LG13: 21304974 .. 21309503 (+)
RNA-Seq Expression	Sed0016251
Synteny	Sed0016251

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTCACAGTTCTTCGTGCTATTGCAGAGGGGCGACAACATTGTATTCCGAGACTGTAAGGGCCCATTTGATAACGTTACTGTTTCCTATTTCTCGTTTCTGTTTCTTATTTTTTGAGAAACGAACTTGTTTGATAACTGTTTTCGTTTCTTATTCTGAAAACAAAAAAAATGTTTCTAAAATTTAGTTGAAAAATGAGAAACTTGTAAATGGTGTTTCTATTGTTCCGTTCTTTTTTTTAAAGTTCTGATATGTTATTTGTTATATATTTAAATTAACGCATATTGCACATATTCTTACTTTTTTTTTTTTTTTGAATTTTGTAATAAACATTTATATTAATTTAATTTCTTATAAGATATATATTATTTACCTATATAATAATTTTTTACATTTAAAAAATATTTTAATTTCTATAAAAATAATATTATATTTACTTATACTTTTTTTTTAGAAGATATTTACTTATACTTAATATTTGACTGTTGTAATAAATAAATAAATTATTTTATTGTATTTTTTTTTAATTTTACCATAGATATGTTTAAATTTTTTTTATATATTTAAAATTTTGCAATAGATATATTTTTTTAGAATATCCAGCTTAATTTCGAAAATTTCTAATATATATTTTTATGTTGTTTATTTTATTTTATTTTTTTGGAAAATTGTAATAAATCACTTATTCTAACAAAATAATTACAAAACTAGTCAAATTTAAAAATATTTGCATCTATAGTAATAAATACGATATTATTAATATTCAAAATACAATATTATTTTATTATTAATATAGTATTTTGTATTATTGAATAATTATTAATACATATGACTATGTTTGTTATTTTTATTTTTATTTTTTGGCTAGTATTATAAATTCTTTTTCAATTTAGCCTATTCTTAAAAATACTCATTTTTTTGTATGTAAATTTTGATAATTTCTTTAATTGTTTAAAATATGTGCTATATATATATATATTTTGAGTACATGTGCTATATTATTATCATACACTTTAATTCTTTTTAAGGTATAAAGAAGCAAAAATTCTAAAAAAATATTAAGAAACAAAAAAAAGAAACAAGAAACAAACAATTGTTATCAAACAAGTTTTATTTTTGTTTCTAATTTTTTTAAGAAACAAGAAACATAAATAGTTATCAAACAGATTCTTGTTTTTTTGTTTAAAATAAAAACAGGAACAAGAAACAAGAAACCGGAAACGAGAACGTTATCAAACGGGCCCTGAGTTTCTCTCCAGATCCGATCTGTTTTGTTCTTCTTTTCCTCTGATTCTTTGAATTGCATCACGTTTCGTTTCAATTTCCGTAGTATTTTCTTTTACGCAATGAATTCTGAATCAGAACAGCGTGATCTTCTCAGAAAACTTAAAATCTTGTAATTCGAACTGTCGTACCTATCGGAAATTAGCGATTCTTCGGTTTATGAGTGTAAAATTAGCGTCCAATGTGATACGACGAATGATTATTGTTAAATGGAGAAGGAGATGCGTTGTAATGACACCTGCATTATACATATTTTATCTTCCTCATACTCATTGGAGCCTTAGAATTTTGAAATGCTGATTCAAGTTCAAGGCAATCATTATACATGATATCTTCGTGCATTTCTTCCCTGCATTCCACCAGCTTTTGTTGTAGGCTATTGGAAAGTGAGTGTGATATATGCTAAAATGATTGTTACAATCATCCTTCCTACTGTTTAAAGTTTATATCTGTAATCAAATCTATGACATCTTTGTTCATCAATTTTCTGCACCCAAATGTTATAGGATCGAGCAGGTTCTCCTATGAGAATAGTTAAAGTGCACGTAAGCTTGTCTGGACACTCACAAAGCATTCCACCAGATTTTTGTCTCGGAATAGGACATTTAGTGCAATGTATGCTTAAATAATTGTTATAGTAAACGTAATACTTTTATGCATTAAAAATATTAGGTATATGGTTGTTGATTTAATTTATTGACTTCTCTTCCGCATGAGATATTTTGTTCATATGAATTCTTTCTCATATATTTTAATTCTTACATTGTTTTTGGTGTCATCTTTCTTTGGAAGCAGAATTTGGATGGTGTAAACTACTTTCATGTGAAGGTTGTAGGACTGTTATTTGCTGCTACAACAAGGATTAATGCATCGCCTTCTCCAAAGAATTGCACGTGTTATCAAAGATTACCTTGGGGTTCTCAATGAAGATTCCCTCAGAAAAAACTTCGTTCTTGTTTATGAGTTGCTGGATGAAGTTATTGTAAGTTTGTTATTGAGAATCGCACCTTCGCCCTACCACACCTATGCTGCCCACACCTACCCCAAAGCTCGGACCCGAGAGACAACAAGGGATGTTAAAATTAAACTCACTTGTGGGTTTTGAACCTATGACTCACCCGTGGTACCCACACCTATTAGAAATTTTTTGTGAGCCTTATCGTGTTACTCATTCATTGATGACATGGATACTACATGTTTGGAGAATTGATTTTCTTTAATTTGTATTTGGCGGCCACATTTTTCTTTGATGCATCTTGTTAAGTGGTAGCAGATATTATCTTATAATTCTACAAGTGGCAAGCATCTCACCTTAATAGGATAAGGGATATCATCTAACAACAAAATTCATGCTAAATTTATATTCTTTTTTGCATCGGTATTTCATAAGTAATGAATTAAAAAAAAAGCATTTATTTATGTGCTCAATTGAAGGAGAGATGGTTGGCATCTGCCCATTAACACATGAATAAAGATTTTGTTTATTCAGGGTTTTTGTTTCTTTGAGTGATCACTATTTTTTCTCAACCTATTACATTTTCCTGGGACTCATCCAGCTTCACCCTCTGGTGACAGATTATAGCAATTCATCTGGTGGAGGGACAGTTATCCTTGATGATTGTAATTTCCATGAATCTGTGCATCTTGATAATTTTGACATTGACAGAACTTTGGTCTTGGTTAGTAAGAAAAAGAAGCAAGTTATGTGCCTGTGCTTACTTGTGAATTTTGATTCAATTTTATAAGGTCCCACTGGAAGGTGAATTTCCTGTCATGAATTATCGAATGACTCAGGAATTCAAGCCTCCTTTTCGTATTAATGCATTGATTGAAGAAGCAGGGCCTCTTAAGGTTGAAATAGTTTCCCTCCTGTGTGTTAACATCATTCATGATTTTTGTCACTAAAACACTTTCTTTTTCAGGCTGAAGTAATTCTTAAAGTTCGTGCTGAATTTGCCTCAAACATCACGGCAAACACAATTATGGTTCAGATGCCACTGCCAACTTTCACGACAAGGTGTGTGTGTGTAGGCATAGAAAAATGTCAAATTATAAATGGTTGTTATTTTTTGTTGTGGTTTGATCTCAAGTTGGACAATCTTCACTGTTTTATCATTTTTCAAAATTTTCTCTAATATTTATGACATTTTCAGGGTTAGCTTTGAGTTGGAACCTGGAGCAGTAGGAAATACAACTGATTTTAAAGAAGCGAACAAGAGACTTGAATGGGGTTTGATGAGCTTTCTGAATCAATAATTTTAGAAAGCTTCAGTGGCAAGTTATTCTGAGCATATGATTTCTCTCTATATTATTCTTTTTAGCACAACATATTTGGAGGTAGGGCATCAAAACCCTTGACCTCTTGGTCGAGAATACATTACCGCCCGGCTAAGCAGGCTTGACCTTTAAGTATCCCGTATGTATTATTTGATTATCAACAAGCCAACAAATAGCTCTCACTAGGTCAATTAACTAAAAGATGATGAGTTCAATTCATGACAACTATCTACCTAAGAAATGTAGGGTCATGCAATATGTCTCGTGAGAATAGTCGAAATACACATTAGTTGGTCTAGACGTTTACGGATTTGGGATTATCAGCTTATCTCTTTTCTCTCACAATTTCTTTCTGCTCGCCTCACTTGCGCATGACTCTCCCATATCAAGTACCCTGGAAAATCCGACATAAATAACTTCCCTGTCTTATACCCTTTTCGCCACTCTCATTTTCTCTTCTTAACTATTCGGAGCATAACCGAATGCCATGTCTCTTGTTCTCTTATCATTAGAGATGTCTAAATTAAATATATGGTTACCATTACTAATACACGTTTCATGGCAGATTGTTGGTGGATCTGAACATACTTTGCATGCAAGGCTCACGTTTTCACAAGAAGCACATGGTAAGTAAACATGTTTGTACATTGACGAACAAGATATTTTTTCTTGGGAAGTAAATATATGCATTTTAATACATTATGTATGGTCAGGAAACATCGTGAAAGAAGCTGGACTTGTTAGTATGACCTTCACAATTCCAATGTACAACGCTTCGAGGCTCCAGGCATGTTATCTAAGCAGAATCGAATCATCTTTTTCGATAATCAATTATAAGATGCTAACATCTTCCCTTTTTATTTGCAGGTTAAGTACTTGCAAATTGCAAAGAAGTCTAACACCTATAATCCGTATAGGTGGGTGAAATATGTGACGCAAGCAAATTCGTACGTCGCTCGGTTGTGA

mRNA sequence

ATGATTTCACAGTTCTTCGTGCTATTGCAGAGGGGCGACAACATTGTATTCCGAGACTGTAAGGGCCCATTTGATAACATATTTTGTTCATATGAATTCTTTCTCATATATTTTAATTCTTACATTGTTTTTGGTGTCATCTTTCTTTGGAAGCAGAATTTGGATGGATTAATGCATCGCCTTCTCCAAAGAATTGCACGTGTTATCAAAGATTACCTTGGGGTTCTCAATGAAGATTCCCTCAGAAAAAACTTCGTTCTTGTTTATGAGTTGCTGGATGAAGTTATTCTCGGACCCGAGAGACAACAAGGGATGTTAAAATTAAACTCACTTGTGGGTTTTGAACCTATGACTCACCCGTGGTACCCACACCTATTAGAAATTTTTTGTGAGCCTTATCGTGTTACTCATTCATTGATGACATGGATACTACATGGATATCATCTAACAACAAAATTCATGCTAAATTTATATTCTTTTTTGCATCGGTATTTCATAAATTATAGCAATTCATCTGGTGGAGGGACAGTTATCCTTGATGATTGTAATTTCCATGAATCTGTGCATCTTGATAATTTTGACATTGACAGAACTTTGGTCTTGGTCCCACTGGAAGGTGAATTTCCTGTCATGAATTATCGAATGACTCAGGAATTCAAGCCTCCTTTTCGTATTAATGCATTGATTGAAGAAGCAGGGCCTCTTAAGGCTGAAGTAATTCTTAAAGTTCGTGCTGAATTTGCCTCAAACATCACGGCAAACACAATTATGGTTCAGATGCCACTGCCAACTTTCACGACAAGGGTTAGCTTTGAGTTGGAACCTGGAGCAGTAGGAAATACAACTGATTTTAAAGAAGCGAACAAGAGACTTGAATGGGAGATGTCTAAATTAAATATATGGTTACCATTACTAATACACGTTTCATGGCAGATTGTTGGTGGATCTGAACATACTTTGCATGCAAGGCTCACGTTTTCACAAGAAGCACATGGAAACATCGTGAAAGAAGCTGGACTTGTTAGTATGACCTTCACAATTCCAATGTACAACGCTTCGAGGCTCCAGGTTAAGTACTTGCAAATTGCAAAGAAGTCTAACACCTATAATCCGTATAGGTGGGTGAAATATGTGACGCAAGCAAATTCGTACGTCGCTCGGTTGTGA

Coding sequence (CDS)

ATGATTTCACAGTTCTTCGTGCTATTGCAGAGGGGCGACAACATTGTATTCCGAGACTGTAAGGGCCCATTTGATAACATATTTTGTTCATATGAATTCTTTCTCATATATTTTAATTCTTACATTGTTTTTGGTGTCATCTTTCTTTGGAAGCAGAATTTGGATGGATTAATGCATCGCCTTCTCCAAAGAATTGCACGTGTTATCAAAGATTACCTTGGGGTTCTCAATGAAGATTCCCTCAGAAAAAACTTCGTTCTTGTTTATGAGTTGCTGGATGAAGTTATTCTCGGACCCGAGAGACAACAAGGGATGTTAAAATTAAACTCACTTGTGGGTTTTGAACCTATGACTCACCCGTGGTACCCACACCTATTAGAAATTTTTTGTGAGCCTTATCGTGTTACTCATTCATTGATGACATGGATACTACATGGATATCATCTAACAACAAAATTCATGCTAAATTTATATTCTTTTTTGCATCGGTATTTCATAAATTATAGCAATTCATCTGGTGGAGGGACAGTTATCCTTGATGATTGTAATTTCCATGAATCTGTGCATCTTGATAATTTTGACATTGACAGAACTTTGGTCTTGGTCCCACTGGAAGGTGAATTTCCTGTCATGAATTATCGAATGACTCAGGAATTCAAGCCTCCTTTTCGTATTAATGCATTGATTGAAGAAGCAGGGCCTCTTAAGGCTGAAGTAATTCTTAAAGTTCGTGCTGAATTTGCCTCAAACATCACGGCAAACACAATTATGGTTCAGATGCCACTGCCAACTTTCACGACAAGGGTTAGCTTTGAGTTGGAACCTGGAGCAGTAGGAAATACAACTGATTTTAAAGAAGCGAACAAGAGACTTGAATGGGAGATGTCTAAATTAAATATATGGTTACCATTACTAATACACGTTTCATGGCAGATTGTTGGTGGATCTGAACATACTTTGCATGCAAGGCTCACGTTTTCACAAGAAGCACATGGAAACATCGTGAAAGAAGCTGGACTTGTTAGTATGACCTTCACAATTCCAATGTACAACGCTTCGAGGCTCCAGGTTAAGTACTTGCAAATTGCAAAGAAGTCTAACACCTATAATCCGTATAGGTGGGTGAAATATGTGACGCAAGCAAATTCGTACGTCGCTCGGTTGTGA

Protein sequence

MISQFFVLLQRGDNIVFRDCKGPFDNIFCSYEFFLIYFNSYIVFGVIFLWKQNLDGLMHRLLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVILGPERQQGMLKLNSLVGFEPMTHPWYPHLLEIFCEPYRVTHSLMTWILHGYHLTTKFMLNLYSFLHRYFINYSNSSGGGTVILDDCNFHESVHLDNFDIDRTLVLVPLEGEFPVMNYRMTQEFKPPFRINALIEEAGPLKAEVILKVRAEFASNITANTIMVQMPLPTFTTRVSFELEPGAVGNTTDFKEANKRLEWEMSKLNIWLPLLIHVSWQIVGGSEHTLHARLTFSQEAHGNIVKEAGLVSMTFTIPMYNASRLQVKYLQIAKKSNTYNPYRWVKYVTQANSYVARL

Homology

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BLAST of Sed0016251 vs. NCBI nr
Match: XP_038899311.1 (AP-4 complex subunit mu [Benincasa hispida])

HSP 1 Score: 452.6 bits (1163), Expect = 3.4e-123
Identity = 280/472 (59.32%), Postives = 308/472 (65.25%), Query Frame = 0


Query: 1   MISQFFVLLQRGDNIVFRDC-----KGPFDNIFCSYEFF----------------LIYFN 60
           MISQFFVL QRGDNIVFRD      KG  +  F   +F+                + YF+
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  SYIVFGVIFLWKQNLD---GLMHRLLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
             +V G++F+    ++    L+  LLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI
Sbjct: 61  VKVV-GLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120

Query: 121 -------------------------------LGP--------ERQQGMLKLNSLVGFEPM 180
                                          LGP        +R  G     S+V  EP 
Sbjct: 121 DFGYVQTTSTEVLKSYVFNEPIVVDAARLPTLGPASIFVQGSKRMPGTAVTKSVVANEPG 180

Query: 181 THPWYPHLLEIFCEPYRVTHSLMTWILHGYHLTTKF--MLNLYSFL-------------- 240
                   ++I  E   VT S       GY LT++    + + S+L              
Sbjct: 181 GRKREEIFVDII-EKISVTFS-----SSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDL 240

Query: 241 -----HRYFINYSNSSGGGTVILDDCNFHESVHLDNFDIDRTLVLVPLEGEFPVMNYRMT 300
                 R   +YS+SSGGGTVILDDCNFHESVHLDNFDIDRTLVLVP EGEFPVMNYRMT
Sbjct: 241 SIGRGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDIDRTLVLVPPEGEFPVMNYRMT 300

Query: 301 QEFKPPFRINALIEEAGPLKAEVILKVRAEFASNITANTIMVQMPLPTFTTRVSFELEPG 360
           QEFKPPFRINALIEEAG LKAEVILKVRAEFAS+ITANTIM+QMPLPTFTTRVSFELEPG
Sbjct: 301 QEFKPPFRINALIEEAGSLKAEVILKVRAEFASSITANTIMIQMPLPTFTTRVSFELEPG 360

Query: 361 AVGNTTDFKEANKRLEWEMSKLNIWLPLLIHVSWQIVGGSEHTLHARLTFSQEAHGNIVK 389
           AVGNTTDFKEANKRLEW + K              IVGGSEHTL ARLTFSQE+HGNIVK
Sbjct: 361 AVGNTTDFKEANKRLEWGLKK--------------IVGGSEHTLRARLTFSQESHGNIVK 420

[Close]

BLAST of Sed0016251 vs. NCBI nr
Match: XP_022981817.1 (AP-4 complex subunit mu-like [Cucurbita maxima] >XP_022981818.1 AP-4 complex subunit mu-like [Cucurbita maxima])

HSP 1 Score: 451.1 bits (1159), Expect = 1.0e-122
Identity = 277/472 (58.69%), Postives = 310/472 (65.68%), Query Frame = 0


Query: 1   MISQFFVLLQRGDNIVFRDC-----KGPFDNIFCSYEFF----------------LIYFN 60
           MISQFFVL QRGDNIVFRD      KG  +  F   +F+                + YF+
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  SYIVFGVIFLWKQNLD---GLMHRLLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
             +V G++F+    ++    L+  LLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI
Sbjct: 61  VKVV-GLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120

Query: 121 -------------------------------LGP--------ERQQGMLKLNSLVGFEPM 180
                                          LGP        +R  G     S+VG EP 
Sbjct: 121 DFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVGNEPG 180

Query: 181 THPWYPHLLEIFCEPYRVTHSLMTWILHGYHLTTKF--MLNLYSFL-------------- 240
                 +  EIF +   +    +T+   GY LT++    + + S+L              
Sbjct: 181 GR----NREEIFVD--IIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDL 240

Query: 241 -----HRYFINYSNSSGGGTVILDDCNFHESVHLDNFDIDRTLVLVPLEGEFPVMNYRMT 300
                 R   +YS+SSGGGTVILDDCNFHESVHLDNFD DRTLVLVP EGEFPVMNYRMT
Sbjct: 241 SIGRGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMT 300

Query: 301 QEFKPPFRINALIEEAGPLKAEVILKVRAEFASNITANTIMVQMPLPTFTTRVSFELEPG 360
           QEFKPPFRINALIEEAGPLKAEVILKVRAEFAS+ITANT+MVQMPLPTFTTRVSFELEPG
Sbjct: 301 QEFKPPFRINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPG 360

Query: 361 AVGNTTDFKEANKRLEWEMSKLNIWLPLLIHVSWQIVGGSEHTLHARLTFSQEAHGNIVK 389
           AVGNTTDFKEA KRLEW + K              IVGGSEHTL ARLTFSQE+HGNIVK
Sbjct: 361 AVGNTTDFKEATKRLEWGLKK--------------IVGGSEHTLRARLTFSQESHGNIVK 420

[Close]

BLAST of Sed0016251 vs. NCBI nr
Match: XP_022940552.1 (AP-4 complex subunit mu-like [Cucurbita moschata] >XP_022940553.1 AP-4 complex subunit mu-like [Cucurbita moschata] >XP_023523639.1 AP-4 complex subunit mu-like [Cucurbita pepo subsp. pepo] >KAG7037877.1 AP-4 complex subunit mu [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 451.1 bits (1159), Expect = 1.0e-122
Identity = 277/472 (58.69%), Postives = 310/472 (65.68%), Query Frame = 0


Query: 1   MISQFFVLLQRGDNIVFRDC-----KGPFDNIFCSYEFF----------------LIYFN 60
           MISQFFVL QRGDNIVFRD      KG  +  F   +F+                + YF+
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  SYIVFGVIFLWKQNLD---GLMHRLLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
             +V G++F+    ++    L+  LLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI
Sbjct: 61  VKVV-GLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120

Query: 121 -------------------------------LGP--------ERQQGMLKLNSLVGFEPM 180
                                          LGP        +R  G     S+VG EP 
Sbjct: 121 DFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPG 180

Query: 181 THPWYPHLLEIFCEPYRVTHSLMTWILHGYHLTTKF--MLNLYSFL-------------- 240
                 +  EIF +   +    +T+   GY LT++    + + S+L              
Sbjct: 181 GR----NREEIFVD--IIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDL 240

Query: 241 -----HRYFINYSNSSGGGTVILDDCNFHESVHLDNFDIDRTLVLVPLEGEFPVMNYRMT 300
                 R   +YS+SSGGGTVILDDCNFHESVHLDNFD DRTLVLVP EGEFPVMNYRMT
Sbjct: 241 SIGRGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMT 300

Query: 301 QEFKPPFRINALIEEAGPLKAEVILKVRAEFASNITANTIMVQMPLPTFTTRVSFELEPG 360
           QEFKPPFRINALIEEAGPLKAEVILKVRAEFAS+ITANT+MVQMPLPTFTTRVSFELEPG
Sbjct: 301 QEFKPPFRINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPG 360

Query: 361 AVGNTTDFKEANKRLEWEMSKLNIWLPLLIHVSWQIVGGSEHTLHARLTFSQEAHGNIVK 389
           AVGNTTDFKEA KRLEW + K              IVGGSEHTL ARLTFSQE+HGNIVK
Sbjct: 361 AVGNTTDFKEATKRLEWGLKK--------------IVGGSEHTLRARLTFSQESHGNIVK 420

[Close]

BLAST of Sed0016251 vs. NCBI nr
Match: XP_004147850.2 (AP-4 complex subunit mu [Cucumis sativus] >KGN59994.1 hypothetical protein Csa_000799 [Cucumis sativus])

HSP 1 Score: 450.7 bits (1158), Expect = 1.3e-122
Identity = 278/472 (58.90%), Postives = 308/472 (65.25%), Query Frame = 0


Query: 1   MISQFFVLLQRGDNIVFRDC-----KGPFDNIFCSYEFF----------------LIYFN 60
           MISQFFVL QRGDNIVFRD      KG  +  F   +F+                + YF+
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  SYIVFGVIFLWKQNLD---GLMHRLLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
             +V G++F+    ++    L+  LLQRIARVIKDYLGVLNEDSLR+NFVLVYELLDEVI
Sbjct: 61  VKVV-GLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRRNFVLVYELLDEVI 120

Query: 121 -------------------------------LGP--------ERQQGMLKLNSLVGFEPM 180
                                          LGP        +R  G     S+V  EP 
Sbjct: 121 DFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVANEPG 180

Query: 181 THPWYPHLLEIFCEPYRVTHSLMTWILHGYHLTTKF--MLNLYSFL-------------- 240
                   ++I  E   VT S       GY LT++    + + S+L              
Sbjct: 181 GRKREEIFVDII-EKISVTFS-----SSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDL 240

Query: 241 -----HRYFINYSNSSGGGTVILDDCNFHESVHLDNFDIDRTLVLVPLEGEFPVMNYRMT 300
                 R   +YS+SSGGGTVILDDCNFHESVHL+NFDIDRTLVLVP EGEFPVMNYRMT
Sbjct: 241 SIGRGGRSIYDYSSSSGGGTVILDDCNFHESVHLENFDIDRTLVLVPPEGEFPVMNYRMT 300

Query: 301 QEFKPPFRINALIEEAGPLKAEVILKVRAEFASNITANTIMVQMPLPTFTTRVSFELEPG 360
           QEFKPPFRINALIEEAG LKAEVILKVRAEFAS+ITANTIM+QMPLPTFTTRVSFELEPG
Sbjct: 301 QEFKPPFRINALIEEAGSLKAEVILKVRAEFASSITANTIMIQMPLPTFTTRVSFELEPG 360

Query: 361 AVGNTTDFKEANKRLEWEMSKLNIWLPLLIHVSWQIVGGSEHTLHARLTFSQEAHGNIVK 389
           AVGNTTDFKEANKRLEW + K              IVGGSEHTL ARLTFSQE+HGNIVK
Sbjct: 361 AVGNTTDFKEANKRLEWSLKK--------------IVGGSEHTLRARLTFSQESHGNIVK 420

[Close]

BLAST of Sed0016251 vs. NCBI nr
Match: XP_008466524.1 (PREDICTED: AP-4 complex subunit mu [Cucumis melo])

HSP 1 Score: 449.5 bits (1155), Expect = 2.9e-122
Identity = 278/472 (58.90%), Postives = 307/472 (65.04%), Query Frame = 0


Query: 1   MISQFFVLLQRGDNIVFRDC-----KGPFDNIFCSYEFF----------------LIYFN 60
           MISQFFVL QRGDNIVFRD      KG  +  F   +F+                + YF+
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  SYIVFGVIFLWKQNLD---GLMHRLLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
             +V G++F+    ++    L+  LLQRIARVIKDYLGVLNEDSLR+NFVLVYELLDEVI
Sbjct: 61  VKVV-GLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRRNFVLVYELLDEVI 120

Query: 121 -------------------------------LGP--------ERQQGMLKLNSLVGFEPM 180
                                          LGP        +R  G     S+V  EP 
Sbjct: 121 DFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVANEPG 180

Query: 181 THPWYPHLLEIFCEPYRVTHSLMTWILHGYHLTTKF--MLNLYSFL-------------- 240
                   ++I  E   VT S       GY LT++    + + S+L              
Sbjct: 181 GRKREEIFVDII-EKISVTFS-----SSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDL 240

Query: 241 -----HRYFINYSNSSGGGTVILDDCNFHESVHLDNFDIDRTLVLVPLEGEFPVMNYRMT 300
                 R   +YS+SSGGGTVILDDCNFHESVHLDNFD DRTLVLVP EGEFPVMNYRMT
Sbjct: 241 SIGRGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDTDRTLVLVPPEGEFPVMNYRMT 300

Query: 301 QEFKPPFRINALIEEAGPLKAEVILKVRAEFASNITANTIMVQMPLPTFTTRVSFELEPG 360
           QEFKPPFRINALIEEAG LKAEVILKVRAEFAS+ITANTIM+QMPLPTFTTRVSFELEPG
Sbjct: 301 QEFKPPFRINALIEEAGSLKAEVILKVRAEFASSITANTIMIQMPLPTFTTRVSFELEPG 360

Query: 361 AVGNTTDFKEANKRLEWEMSKLNIWLPLLIHVSWQIVGGSEHTLHARLTFSQEAHGNIVK 389
           AVGNTTDFKEANKRLEW + K              IVGGSEHTL ARLTFSQE+HGNIVK
Sbjct: 361 AVGNTTDFKEANKRLEWGLKK--------------IVGGSEHTLRARLTFSQESHGNIVK 420

[Close]

BLAST of Sed0016251 vs. ExPASy Swiss-Prot
Match: Q9SB50 (AP-4 complex subunit mu OS=Arabidopsis thaliana OX=3702 GN=AP4M PE=2 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.8e-106
Identity = 244/468 (52.14%), Postives = 286/468 (61.11%), Query Frame = 0


Query: 1   MISQFFVLLQRGDNIVFRDC-----KGPFDNIFCSYEFF----------------LIYFN 60
           MISQFFVL QRGDNIVFRD      KG  +  F   +F+                + YF+
Sbjct: 2   MISQFFVLSQRGDNIVFRDYRAEVPKGSTETFFRKVKFWKEDGNAEAPPIFNVDGVNYFH 61

Query: 61  SYIVFGVIFLWKQNLD---GLMHRLLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
             +V G+ F+    ++    L+  LLQRIARVIKDYLGVLNEDS RKNFVLVYELLDEVI
Sbjct: 62  VKVV-GLYFVATTRVNVSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVI 121

Query: 121 -LGPERQQGMLKLNSLVGFEPMT------HPWYPHLL----------------------- 180
             G  +      L S +  EP+        P  P  +                       
Sbjct: 122 DFGYVQTTSTEVLKSYIFNEPIVVSPARLQPIDPAAIFTQGAKRMPGTAVTKSVVANDPG 181

Query: 181 -----EIFCEPYRVTHSLMTWILHGYHLTTKF--MLNLYSFLH----------------- 240
                EIF +   +    +T+   GY LT++    + + S+L                  
Sbjct: 182 GRRREEIFVD--IIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLNIGR 241

Query: 241 --RYFINYSNSSGGGTVILDDCNFHESVHLDNFDIDRTLVLVPLEGEFPVMNYRMTQEFK 300
             R   +Y +SSG G VILDDCNFHESV LD+FD DRTL LVP +GEFPVMNYRMTQEFK
Sbjct: 242 GGRSVYDYRSSSGSG-VILDDCNFHESVRLDSFDSDRTLSLVPPDGEFPVMNYRMTQEFK 301

Query: 301 PPFRINALIEEAGPLKAEVILKVRAEFASNITANTIMVQMPLPTFTTRVSFELEPGAVGN 360
           PPF +N LIEEAG LKAEVI+K+RAEF S+I ANTI VQMPLP +T+R SFELEPGA G 
Sbjct: 302 PPFHVNTLIEEAGRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQ 361

Query: 361 TTDFKEANKRLEWEMSKLNIWLPLLIHVSWQIVGGSEHTLHARLTFSQEAHGNIVKEAGL 389
            TDFKE+NK LEW + K              IVGG EHTL A+LTFSQE HGNI KEAG 
Sbjct: 362 RTDFKESNKMLEWNLKK--------------IVGGGEHTLRAKLTFSQEFHGNITKEAGP 421

[Close]

BLAST of Sed0016251 vs. ExPASy Swiss-Prot
Match: P54672 (AP-2 complex subunit mu OS=Dictyostelium discoideum OX=44689 GN=apm2 PE=2 SV=2)

HSP 1 Score: 119.4 bits (298), Expect = 9.0e-26
Identity = 107/408 (26.23%), Postives = 179/408 (43.87%), Query Frame = 0


Query: 41  YIVFGVIFL---WKQNLDGLM-HRLLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEV- 100
           YI  G I++    +QN++  M   +L ++  + K Y   L+EDS+R NFVLVYELLDE+ 
Sbjct: 56  YIKVGNIYIVGVSRQNVNACMVFEVLHQLVDIFKSYFDNLDEDSIRNNFVLVYELLDEIL 115

Query: 101 -----------ILGPERQQGMLKLNSLVGFE-----------PMTHPW------------ 160
                      +L     QG  KL SL   +             T PW            
Sbjct: 116 DFGYPQNCSTDVLKLYITQGQGKLKSLDKLKQDKISKITIQATGTTPWRTPDIKYKRNEL 175

Query: 161 YPHLLEIFCEPYRVTHSLMTWILHGYHLTTKFMLNL----YSFLHRYFINYSNSSGGGT- 220
           Y  ++E          +++   + G  +   F+  +    +    +  ++   S+ GG+ 
Sbjct: 176 YIDVVESVNLLMSAEGNILRADVSGQVMMKCFLSGMPECKFGMNDKVIMDREKSTNGGSA 235

Query: 221 ----------VILDDCNFHESVHLDNFDIDRTLVLVPLEGEFPVMNYRMTQEFKPPFRIN 280
                     + +DD  FH+ V L  FD DRT+  +P +GEF +M YR T+    PF++ 
Sbjct: 236 ARSGARRANGIEIDDITFHQCVRLGKFDSDRTVSFIPPDGEFELMRYRTTEHINLPFKVI 295

Query: 281 ALIEEAGPLKAEVILKVRAEFASNITANTIMVQMPLPTFTTRVSFELEPGAVGNTTDFKE 340
            ++ E G  + E  + V++ F+S +    + V +P P  T      +  G          
Sbjct: 296 PIVREMGRTRLECSVTVKSNFSSKMFGANVKVIIPTPKNTAVCKIVVAAGKAK------- 355

Query: 341 ANKRLEWEMSKLNIWLPLLIHVSWQI---VGGSEHTLHARLTFSQEAHGNIVKEAGL--- 389
                         ++P    + W+I    G +E TL A +     A  N+ K+A     
Sbjct: 356 --------------YMPEQDAIIWRIRRFPGDTEFTLRAEVELM--ASVNLDKKAWSRPP 415

[Close]

BLAST of Sed0016251 vs. ExPASy Swiss-Prot
Match: Q32Q06 (AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3)

HSP 1 Score: 115.2 bits (287), Expect = 1.7e-24
Identity = 107/394 (27.16%), Postives = 172/394 (43.65%), Query Frame = 0


Query: 45  GVIFLW-------------KQNLDGLMHRLLQRIARVIKDYLGVLNEDSLRKNFVLVYEL 104
           GV F+W             K     L+   L ++ +V  +Y   L E+S+R NFV++YEL
Sbjct: 54  GVRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYEL 113

Query: 105 LDEV------------ILGPERQQGMLKLNSLVGFEPMT----HPWYPHLL-----EIFC 164
           LDE+            IL     Q   KL +     P T      W    +     E+F 
Sbjct: 114 LDELMDFGYPQTTDSKILQEYITQEGHKLETGAPRPPATVTNAVSWRSEGIKYRKNEVFL 173

Query: 165 EPYRVTHSLMTWILHGYHLTTKFM--LNLYSFLH-----RYFIN----YSNSSGG--GTV 224
           +     + L++   +G  L ++ +  + +  FL      R  +N    + N+  G   +V
Sbjct: 174 DVIEAVNLLVS--ANGNVLRSEIVGSIKMRVFLSGMPELRLGLNDKVLFDNTGRGKSKSV 233

Query: 225 ILDDCNFHESVHLDNFDIDRTLVLVPLEGEFPVMNYRMTQEFKPPFRINALIEEAGPLKA 284
            L+D  FH+ V L  F+ DRT+  +P +GEF +M+YR+    KP   I ++IE+    + 
Sbjct: 234 ELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIEKHSHSRI 293

Query: 285 EVILKVRAEFASNITANTIMVQMPLPTFTTRVSFELEPGAVGNTTDFKEANKRLEWEMSK 344
           E ++K +++F    TAN + + +P+P       F+   G+V                   
Sbjct: 294 EYMVKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVK------------------ 353

Query: 345 LNIWLPLLIHVSWQI---VGGSEHTLHARLTF-SQEAHGNIVKEAGLVSMTFTIPMYNAS 388
              W+P    + W I    GG E+ + A     S EA     K    +S+ F IP +  S
Sbjct: 354 ---WVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKEGKPP--ISVKFEIPYFTTS 413

[Close]

BLAST of Sed0016251 vs. ExPASy Swiss-Prot
Match: Q2KJ81 (AP-1 complex subunit mu-1 OS=Bos taurus OX=9913 GN=AP1M1 PE=1 SV=3)

HSP 1 Score: 114.8 bits (286), Expect = 2.2e-24
Identity = 107/394 (27.16%), Postives = 172/394 (43.65%), Query Frame = 0


Query: 45  GVIFLW-------------KQNLDGLMHRLLQRIARVIKDYLGVLNEDSLRKNFVLVYEL 104
           GV F+W             K     L+   L ++ +V  +Y   L E+S+R NFV++YEL
Sbjct: 54  GVRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYEL 113

Query: 105 LDEV------------ILGPERQQGMLKLNSLVGFEPMT----HPWYPHLL-----EIFC 164
           LDE+            IL     Q   KL +     P T      W    +     E+F 
Sbjct: 114 LDELMDFGYPQTTDSKILQEYITQEGHKLETGAPRPPATVTNAVSWRSEGIKYRKNEVFL 173

Query: 165 EPYRVTHSLMTWILHGYHLTTKFM--LNLYSFLH-----RYFIN----YSNSSGG--GTV 224
           +     + L++   +G  L ++ +  + +  FL      R  +N    + N+  G   +V
Sbjct: 174 DVIESVNLLVS--ANGNVLRSEIVGSIKMRVFLSGMPELRLGLNDKVLFDNTGRGKSKSV 233

Query: 225 ILDDCNFHESVHLDNFDIDRTLVLVPLEGEFPVMNYRMTQEFKPPFRINALIEEAGPLKA 284
            L+D  FH+ V L  F+ DRT+  +P +GEF +M+YR+    KP   I ++IE+    + 
Sbjct: 234 ELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIEKHSHSRI 293

Query: 285 EVILKVRAEFASNITANTIMVQMPLPTFTTRVSFELEPGAVGNTTDFKEANKRLEWEMSK 344
           E ++K +++F    TAN + + +P+P       F+   G+V                   
Sbjct: 294 EYMIKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVK------------------ 353

Query: 345 LNIWLPLLIHVSWQI---VGGSEHTLHARLTF-SQEAHGNIVKEAGLVSMTFTIPMYNAS 388
              W+P    + W I    GG E+ + A     S EA     K    +S+ F IP +  S
Sbjct: 354 ---WVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKEGKPP--ISVKFEIPYFTTS 413

[Close]

BLAST of Sed0016251 vs. ExPASy Swiss-Prot
Match: Q9BXS5 (AP-1 complex subunit mu-1 OS=Homo sapiens OX=9606 GN=AP1M1 PE=1 SV=3)

HSP 1 Score: 114.8 bits (286), Expect = 2.2e-24
Identity = 107/394 (27.16%), Postives = 172/394 (43.65%), Query Frame = 0


Query: 45  GVIFLW-------------KQNLDGLMHRLLQRIARVIKDYLGVLNEDSLRKNFVLVYEL 104
           GV F+W             K     L+   L ++ +V  +Y   L E+S+R NFV++YEL
Sbjct: 54  GVRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYEL 113

Query: 105 LDEV------------ILGPERQQGMLKLNSLVGFEPMT----HPWYPHLL-----EIFC 164
           LDE+            IL     Q   KL +     P T      W    +     E+F 
Sbjct: 114 LDELMDFGYPQTTDSKILQEYITQEGHKLETGAPRPPATVTNAVSWRSEGIKYRKNEVFL 173

Query: 165 EPYRVTHSLMTWILHGYHLTTKFM--LNLYSFLH-----RYFIN----YSNSSGG--GTV 224
           +     + L++   +G  L ++ +  + +  FL      R  +N    + N+  G   +V
Sbjct: 174 DVIESVNLLVS--ANGNVLRSEIVGSIKMRVFLSGMPELRLGLNDKVLFDNTGRGKSKSV 233

Query: 225 ILDDCNFHESVHLDNFDIDRTLVLVPLEGEFPVMNYRMTQEFKPPFRINALIEEAGPLKA 284
            L+D  FH+ V L  F+ DRT+  +P +GEF +M+YR+    KP   I ++IE+    + 
Sbjct: 234 ELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIEKHSHSRI 293

Query: 285 EVILKVRAEFASNITANTIMVQMPLPTFTTRVSFELEPGAVGNTTDFKEANKRLEWEMSK 344
           E ++K +++F    TAN + + +P+P       F+   G+V                   
Sbjct: 294 EYMIKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVK------------------ 353

Query: 345 LNIWLPLLIHVSWQI---VGGSEHTLHARLTF-SQEAHGNIVKEAGLVSMTFTIPMYNAS 388
              W+P    + W I    GG E+ + A     S EA     K    +S+ F IP +  S
Sbjct: 354 ---WVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKEGKPP--ISVKFEIPYFTTS 413

[Close]

BLAST of Sed0016251 vs. ExPASy TrEMBL
Match: A0A6J1IV20 (AP-4 complex subunit mu-like OS=Cucurbita maxima OX=3661 GN=LOC111480852 PE=3 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 4.8e-123
Identity = 277/472 (58.69%), Postives = 310/472 (65.68%), Query Frame = 0


Query: 1   MISQFFVLLQRGDNIVFRDC-----KGPFDNIFCSYEFF----------------LIYFN 60
           MISQFFVL QRGDNIVFRD      KG  +  F   +F+                + YF+
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  SYIVFGVIFLWKQNLD---GLMHRLLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
             +V G++F+    ++    L+  LLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI
Sbjct: 61  VKVV-GLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120

Query: 121 -------------------------------LGP--------ERQQGMLKLNSLVGFEPM 180
                                          LGP        +R  G     S+VG EP 
Sbjct: 121 DFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVGNEPG 180

Query: 181 THPWYPHLLEIFCEPYRVTHSLMTWILHGYHLTTKF--MLNLYSFL-------------- 240
                 +  EIF +   +    +T+   GY LT++    + + S+L              
Sbjct: 181 GR----NREEIFVD--IIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDL 240

Query: 241 -----HRYFINYSNSSGGGTVILDDCNFHESVHLDNFDIDRTLVLVPLEGEFPVMNYRMT 300
                 R   +YS+SSGGGTVILDDCNFHESVHLDNFD DRTLVLVP EGEFPVMNYRMT
Sbjct: 241 SIGRGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMT 300

Query: 301 QEFKPPFRINALIEEAGPLKAEVILKVRAEFASNITANTIMVQMPLPTFTTRVSFELEPG 360
           QEFKPPFRINALIEEAGPLKAEVILKVRAEFAS+ITANT+MVQMPLPTFTTRVSFELEPG
Sbjct: 301 QEFKPPFRINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPG 360

Query: 361 AVGNTTDFKEANKRLEWEMSKLNIWLPLLIHVSWQIVGGSEHTLHARLTFSQEAHGNIVK 389
           AVGNTTDFKEA KRLEW + K              IVGGSEHTL ARLTFSQE+HGNIVK
Sbjct: 361 AVGNTTDFKEATKRLEWGLKK--------------IVGGSEHTLRARLTFSQESHGNIVK 420

[Close]

BLAST of Sed0016251 vs. ExPASy TrEMBL
Match: A0A6J1FJY0 (AP-4 complex subunit mu-like OS=Cucurbita moschata OX=3662 GN=LOC111446118 PE=3 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 4.8e-123
Identity = 277/472 (58.69%), Postives = 310/472 (65.68%), Query Frame = 0


Query: 1   MISQFFVLLQRGDNIVFRDC-----KGPFDNIFCSYEFF----------------LIYFN 60
           MISQFFVL QRGDNIVFRD      KG  +  F   +F+                + YF+
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  SYIVFGVIFLWKQNLD---GLMHRLLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
             +V G++F+    ++    L+  LLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI
Sbjct: 61  VKVV-GLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120

Query: 121 -------------------------------LGP--------ERQQGMLKLNSLVGFEPM 180
                                          LGP        +R  G     S+VG EP 
Sbjct: 121 DFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPG 180

Query: 181 THPWYPHLLEIFCEPYRVTHSLMTWILHGYHLTTKF--MLNLYSFL-------------- 240
                 +  EIF +   +    +T+   GY LT++    + + S+L              
Sbjct: 181 GR----NREEIFVD--IIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDL 240

Query: 241 -----HRYFINYSNSSGGGTVILDDCNFHESVHLDNFDIDRTLVLVPLEGEFPVMNYRMT 300
                 R   +YS+SSGGGTVILDDCNFHESVHLDNFD DRTLVLVP EGEFPVMNYRMT
Sbjct: 241 SIGRGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMT 300

Query: 301 QEFKPPFRINALIEEAGPLKAEVILKVRAEFASNITANTIMVQMPLPTFTTRVSFELEPG 360
           QEFKPPFRINALIEEAGPLKAEVILKVRAEFAS+ITANT+MVQMPLPTFTTRVSFELEPG
Sbjct: 301 QEFKPPFRINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPG 360

Query: 361 AVGNTTDFKEANKRLEWEMSKLNIWLPLLIHVSWQIVGGSEHTLHARLTFSQEAHGNIVK 389
           AVGNTTDFKEA KRLEW + K              IVGGSEHTL ARLTFSQE+HGNIVK
Sbjct: 361 AVGNTTDFKEATKRLEWGLKK--------------IVGGSEHTLRARLTFSQESHGNIVK 420

[Close]

BLAST of Sed0016251 vs. ExPASy TrEMBL
Match: A0A0A0LGF2 (MHD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G860300 PE=3 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 6.3e-123
Identity = 278/472 (58.90%), Postives = 308/472 (65.25%), Query Frame = 0


Query: 1   MISQFFVLLQRGDNIVFRDC-----KGPFDNIFCSYEFF----------------LIYFN 60
           MISQFFVL QRGDNIVFRD      KG  +  F   +F+                + YF+
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  SYIVFGVIFLWKQNLD---GLMHRLLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
             +V G++F+    ++    L+  LLQRIARVIKDYLGVLNEDSLR+NFVLVYELLDEVI
Sbjct: 61  VKVV-GLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRRNFVLVYELLDEVI 120

Query: 121 -------------------------------LGP--------ERQQGMLKLNSLVGFEPM 180
                                          LGP        +R  G     S+V  EP 
Sbjct: 121 DFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVANEPG 180

Query: 181 THPWYPHLLEIFCEPYRVTHSLMTWILHGYHLTTKF--MLNLYSFL-------------- 240
                   ++I  E   VT S       GY LT++    + + S+L              
Sbjct: 181 GRKREEIFVDII-EKISVTFS-----SSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDL 240

Query: 241 -----HRYFINYSNSSGGGTVILDDCNFHESVHLDNFDIDRTLVLVPLEGEFPVMNYRMT 300
                 R   +YS+SSGGGTVILDDCNFHESVHL+NFDIDRTLVLVP EGEFPVMNYRMT
Sbjct: 241 SIGRGGRSIYDYSSSSGGGTVILDDCNFHESVHLENFDIDRTLVLVPPEGEFPVMNYRMT 300

Query: 301 QEFKPPFRINALIEEAGPLKAEVILKVRAEFASNITANTIMVQMPLPTFTTRVSFELEPG 360
           QEFKPPFRINALIEEAG LKAEVILKVRAEFAS+ITANTIM+QMPLPTFTTRVSFELEPG
Sbjct: 301 QEFKPPFRINALIEEAGSLKAEVILKVRAEFASSITANTIMIQMPLPTFTTRVSFELEPG 360

Query: 361 AVGNTTDFKEANKRLEWEMSKLNIWLPLLIHVSWQIVGGSEHTLHARLTFSQEAHGNIVK 389
           AVGNTTDFKEANKRLEW + K              IVGGSEHTL ARLTFSQE+HGNIVK
Sbjct: 361 AVGNTTDFKEANKRLEWSLKK--------------IVGGSEHTLRARLTFSQESHGNIVK 420

[Close]

BLAST of Sed0016251 vs. ExPASy TrEMBL
Match: A0A1S3CRM0 (AP-4 complex subunit mu OS=Cucumis melo OX=3656 GN=LOC103503915 PE=3 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 1.4e-122
Identity = 278/472 (58.90%), Postives = 307/472 (65.04%), Query Frame = 0


Query: 1   MISQFFVLLQRGDNIVFRDC-----KGPFDNIFCSYEFF----------------LIYFN 60
           MISQFFVL QRGDNIVFRD      KG  +  F   +F+                + YF+
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  SYIVFGVIFLWKQNLD---GLMHRLLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
             +V G++F+    ++    L+  LLQRIARVIKDYLGVLNEDSLR+NFVLVYELLDEVI
Sbjct: 61  VKVV-GLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRRNFVLVYELLDEVI 120

Query: 121 -------------------------------LGP--------ERQQGMLKLNSLVGFEPM 180
                                          LGP        +R  G     S+V  EP 
Sbjct: 121 DFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVANEPG 180

Query: 181 THPWYPHLLEIFCEPYRVTHSLMTWILHGYHLTTKF--MLNLYSFL-------------- 240
                   ++I  E   VT S       GY LT++    + + S+L              
Sbjct: 181 GRKREEIFVDII-EKISVTFS-----SSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDL 240

Query: 241 -----HRYFINYSNSSGGGTVILDDCNFHESVHLDNFDIDRTLVLVPLEGEFPVMNYRMT 300
                 R   +YS+SSGGGTVILDDCNFHESVHLDNFD DRTLVLVP EGEFPVMNYRMT
Sbjct: 241 SIGRGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDTDRTLVLVPPEGEFPVMNYRMT 300

Query: 301 QEFKPPFRINALIEEAGPLKAEVILKVRAEFASNITANTIMVQMPLPTFTTRVSFELEPG 360
           QEFKPPFRINALIEEAG LKAEVILKVRAEFAS+ITANTIM+QMPLPTFTTRVSFELEPG
Sbjct: 301 QEFKPPFRINALIEEAGSLKAEVILKVRAEFASSITANTIMIQMPLPTFTTRVSFELEPG 360

Query: 361 AVGNTTDFKEANKRLEWEMSKLNIWLPLLIHVSWQIVGGSEHTLHARLTFSQEAHGNIVK 389
           AVGNTTDFKEANKRLEW + K              IVGGSEHTL ARLTFSQE+HGNIVK
Sbjct: 361 AVGNTTDFKEANKRLEWGLKK--------------IVGGSEHTLRARLTFSQESHGNIVK 420

[Close]

BLAST of Sed0016251 vs. ExPASy TrEMBL
Match: A0A6J1FAX7 (AP-4 complex subunit mu OS=Cucurbita moschata OX=3662 GN=LOC111443665 PE=3 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.8e-122
Identity = 278/472 (58.90%), Postives = 306/472 (64.83%), Query Frame = 0


Query: 1   MISQFFVLLQRGDNIVFRDC-----KGPFDNIFCSYEFF----------------LIYFN 60
           MISQFFVL QRGDNIVFRD      KG  +  F   +F+                + YF+
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  SYIVFGVIFLWKQNLD---GLMHRLLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
             +V G++F+    ++    L+  LLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI
Sbjct: 61  VKVV-GLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120

Query: 121 -------------------------------LGP--------ERQQGMLKLNSLVGFEPM 180
                                          LGP        +R  G     S+V  EP 
Sbjct: 121 DFGYVQTTSTEVLKSYVFNEPLVVDSARLPPLGPASIFVQGSKRMPGTAVTKSVVANEPG 180

Query: 181 THPWYPHLLEIFCEPYRVTHSLMTWILHGYHLTTKF--MLNLYSFL-------------- 240
                   ++I  E   VT S       GY LT++    + + S+L              
Sbjct: 181 GRKREEIFVDII-EKISVTFS-----SSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDL 240

Query: 241 -----HRYFINYSNSSGGGTVILDDCNFHESVHLDNFDIDRTLVLVPLEGEFPVMNYRMT 300
                 +   +YS+SSGGGTVILDDCNFHESVHLDNFDIDRTLVLVP EGEFPVMNYRMT
Sbjct: 241 SIGRGGKSIYDYSSSSGGGTVILDDCNFHESVHLDNFDIDRTLVLVPPEGEFPVMNYRMT 300

Query: 301 QEFKPPFRINALIEEAGPLKAEVILKVRAEFASNITANTIMVQMPLPTFTTRVSFELEPG 360
           QEFKPPFRINALIEEAG LKAEVILKVRAEFASNITANTI +QMPLPTFTTRVSFELEPG
Sbjct: 301 QEFKPPFRINALIEEAGSLKAEVILKVRAEFASNITANTINIQMPLPTFTTRVSFELEPG 360

Query: 361 AVGNTTDFKEANKRLEWEMSKLNIWLPLLIHVSWQIVGGSEHTLHARLTFSQEAHGNIVK 389
           AVGNTTDFKEANKRLEW + K              IVGGSEHTL ARLTFSQE+HGNIVK
Sbjct: 361 AVGNTTDFKEANKRLEWGLKK--------------IVGGSEHTLRARLTFSQESHGNIVK 420

[Close]

BLAST of Sed0016251 vs. TAIR 10
Match: AT4G24550.2 (Clathrin adaptor complexes medium subunit family protein )

HSP 1 Score: 387.5 bits (994), Expect = 1.3e-107
Identity = 244/468 (52.14%), Postives = 286/468 (61.11%), Query Frame = 0


Query: 1   MISQFFVLLQRGDNIVFRDC-----KGPFDNIFCSYEFF----------------LIYFN 60
           MISQFFVL QRGDNIVFRD      KG  +  F   +F+                + YF+
Sbjct: 2   MISQFFVLSQRGDNIVFRDYRAEVPKGSTETFFRKVKFWKEDGNAEAPPIFNVDGVNYFH 61

Query: 61  SYIVFGVIFLWKQNLD---GLMHRLLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
             +V G+ F+    ++    L+  LLQRIARVIKDYLGVLNEDS RKNFVLVYELLDEVI
Sbjct: 62  VKVV-GLYFVATTRVNVSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVI 121

Query: 121 -LGPERQQGMLKLNSLVGFEPMT------HPWYPHLL----------------------- 180
             G  +      L S +  EP+        P  P  +                       
Sbjct: 122 DFGYVQTTSTEVLKSYIFNEPIVVSPARLQPIDPAAIFTQGAKRMPGTAVTKSVVANDPG 181

Query: 181 -----EIFCEPYRVTHSLMTWILHGYHLTTKF--MLNLYSFLH----------------- 240
                EIF +   +    +T+   GY LT++    + + S+L                  
Sbjct: 182 GRRREEIFVD--IIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLNIGR 241

Query: 241 --RYFINYSNSSGGGTVILDDCNFHESVHLDNFDIDRTLVLVPLEGEFPVMNYRMTQEFK 300
             R   +Y +SSG G VILDDCNFHESV LD+FD DRTL LVP +GEFPVMNYRMTQEFK
Sbjct: 242 GGRSVYDYRSSSGSG-VILDDCNFHESVRLDSFDSDRTLSLVPPDGEFPVMNYRMTQEFK 301

Query: 301 PPFRINALIEEAGPLKAEVILKVRAEFASNITANTIMVQMPLPTFTTRVSFELEPGAVGN 360
           PPF +N LIEEAG LKAEVI+K+RAEF S+I ANTI VQMPLP +T+R SFELEPGA G 
Sbjct: 302 PPFHVNTLIEEAGRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQ 361

Query: 361 TTDFKEANKRLEWEMSKLNIWLPLLIHVSWQIVGGSEHTLHARLTFSQEAHGNIVKEAGL 389
            TDFKE+NK LEW + K              IVGG EHTL A+LTFSQE HGNI KEAG 
Sbjct: 362 RTDFKESNKMLEWNLKK--------------IVGGGEHTLRAKLTFSQEFHGNITKEAGP 421

[Close]

BLAST of Sed0016251 vs. TAIR 10
Match: AT4G24550.1 (Clathrin adaptor complexes medium subunit family protein )

HSP 1 Score: 270.4 bits (690), Expect = 2.3e-72
Identity = 181/381 (47.51%), Postives = 217/381 (56.96%), Query Frame = 0


Query: 1   MISQFFVLLQRGDNIVFRDC-----KGPFDNIFCSYEFF----------------LIYFN 60
           MISQFFVL QRGDNIVFRD      KG  +  F   +F+                + YF+
Sbjct: 2   MISQFFVLSQRGDNIVFRDYRAEVPKGSTETFFRKVKFWKEDGNAEAPPIFNVDGVNYFH 61

Query: 61  SYIVFGVIFLWKQNLD---GLMHRLLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
             +V G+ F+    ++    L+  LLQRIARVIKDYLGVLNEDS RKNFVLVYELLDEVI
Sbjct: 62  VKVV-GLYFVATTRVNVSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVI 121

Query: 121 -LGPERQQGMLKLNSLVGFEPMT------HPWYPHLL----------------------- 180
             G  +      L S +  EP+        P  P  +                       
Sbjct: 122 DFGYVQTTSTEVLKSYIFNEPIVVSPARLQPIDPAAIFTQGAKRMPGTAVTKSVVANDPG 181

Query: 181 -----EIFCEPYRVTHSLMTWILHGYHLTTKF--MLNLYSFLH----------------- 240
                EIF +   +    +T+   GY LT++    + + S+L                  
Sbjct: 182 GRRREEIFVD--IIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLNIGR 241

Query: 241 --RYFINYSNSSGGGTVILDDCNFHESVHLDNFDIDRTLVLVPLEGEFPVMNYRMTQEFK 300
             R   +Y +SSG G VILDDCNFHESV LD+FD DRTL LVP +GEFPVMNYRMTQEFK
Sbjct: 242 GGRSVYDYRSSSGSG-VILDDCNFHESVRLDSFDSDRTLSLVPPDGEFPVMNYRMTQEFK 301

Query: 301 PPFRINALIEEAGPLKAEVILKVRAEFASNITANTIMVQMPLPTFTTRVSFELEPGAVGN 302
           PPF +N LIEEAG LKAEVI+K+RAEF S+I ANTI VQMPLP +T+R SFELEPGA G 
Sbjct: 302 PPFHVNTLIEEAGRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQ 361

[Close]

BLAST of Sed0016251 vs. TAIR 10
Match: AT4G24550.3 (Clathrin adaptor complexes medium subunit family protein )

HSP 1 Score: 265.4 bits (677), Expect = 7.2e-71
Identity = 179/378 (47.35%), Postives = 216/378 (57.14%), Query Frame = 0


Query: 1   MISQFFVLLQRGDNIVFRDC-----KGPFDNIFCSYEFF----------------LIYFN 60
           MISQFFVL QRGDNIVFRD      KG  +  F   +F+                + YF+
Sbjct: 2   MISQFFVLSQRGDNIVFRDYRAEVPKGSTETFFRKVKFWKEDGNAEAPPIFNVDGVNYFH 61

Query: 61  SYIVFGVIFLWKQNLD---GLMHRLLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
             +V G+ F+    ++    L+  LLQRIARVIKDYLGVLNEDS RKNFVLVYELLDEVI
Sbjct: 62  VKVV-GLYFVATTRVNVSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVI 121

Query: 121 -LGPERQQGMLKLNSLVGFEPMT------HPWYPHLL----------------------- 180
             G  +      L S +  EP+        P  P  +                       
Sbjct: 122 DFGYVQTTSTEVLKSYIFNEPIVVSPARLQPIDPAAIFTQGAKRMPGTAVTKSVVANDPG 181

Query: 181 -----EIFCEPYRVTHSLMTWILHGYHLTTKF--MLNLYSFLH----------------- 240
                EIF +   +    +T+   GY LT++    + + S+L                  
Sbjct: 182 GRRREEIFVD--IIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLNIGR 241

Query: 241 --RYFINYSNSSGGGTVILDDCNFHESVHLDNFDIDRTLVLVPLEGEFPVMNYRMTQEFK 299
             R   +Y +SSG G VILDDCNFHESV LD+FD DRTL LVP +GEFPVMNYRMTQEFK
Sbjct: 242 GGRSVYDYRSSSGSG-VILDDCNFHESVRLDSFDSDRTLSLVPPDGEFPVMNYRMTQEFK 301

[Close]

BLAST of Sed0016251 vs. TAIR 10
Match: AT5G46630.1 (Clathrin adaptor complexes medium subunit family protein )

HSP 1 Score: 114.4 bits (285), Expect = 2.1e-25
Identity = 67/217 (30.88%), Postives = 114/217 (52.53%), Query Frame = 0


Query: 171 SSGGGTVILDDCNFHESVHLDNFDIDRTLVLVPLEGEFPVMNYRMTQEFKPPFRINALIE 230
           +  G T+ LDD  FH+ V+L  F+ ++T+  VP +GEF +M YR+T+    PFR+   I+
Sbjct: 240 AKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIK 299

Query: 231 EAGPLKAEVILKVRAEFASNITANTIMVQMPLPTFTTRVSFELEPGAVGNTTDFKEANKR 290
           E G  + EV +KV++ F + + A  ++V++P+P  T + +F++  G              
Sbjct: 300 ELGRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTNFQVTTG-------------- 359

Query: 291 LEWEMSKLNIWLPLLIHVSWQIVGGSEHTLHARLTFSQEAHGNIVKEAGLVSMTFTIPMY 350
                +K N  +  L+    +  G +E TL A +                + M F +PM+
Sbjct: 360 ----RAKYNPSIDCLVWKIRKFPGQTESTLSAEIELISTMGEKKSWTRPPIQMEFQVPMF 419

Query: 351 NASRLQVKYLQIAKKSNTYNPYRWVKYVTQANSYVAR 388
            AS L+V++L++ +KS  YN   WV+Y+T+A SY  R
Sbjct: 420 TASGLRVRFLKVWEKSG-YNTVEWVRYITKAGSYEIR 437

[Close]

BLAST of Sed0016251 vs. TAIR 10
Match: AT1G60780.1 (Clathrin adaptor complexes medium subunit family protein )

HSP 1 Score: 109.0 bits (271), Expect = 8.7e-24
Identity = 93/367 (25.34%), Postives = 156/367 (42.51%), Query Frame = 0


Query: 62  LQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI-LGPERQQGMLKLNSLVGFEPMTHP 121
           L R+  V K Y   L E+SLR NFV+VYELLDE++  G  +      L+  +  +     
Sbjct: 87  LHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEARILSEFIKTD----- 146

Query: 122 WYPHLLEIFCEPYRVTHSLMTWILHG--YHLTTKFM------------------------ 181
              + +E+   P     + ++W   G  Y     F+                        
Sbjct: 147 --AYRMEVTQRPPMAVTNAVSWRSEGIQYKKNEVFLDVIENVNILVNSNGQIVRSDVVGA 206

Query: 182 LNLYSFL-----------HRYFIN-YSNSSGGGTVILDDCNFHESVHLDNFDIDRTLVLV 241
           L + ++L            R  +     ++ G  + L+D  FH+ V L  F+ DRT+  +
Sbjct: 207 LKMRTYLTGMPECKLGLNDRVLLEAQGRATKGKAIDLEDIKFHQCVRLARFENDRTISFI 266

Query: 242 PLEGEFPVMNYRMTQEFKPPFRINALIEEAGPLKAEVILKVRAEFASNITANTIMVQMPL 301
           P +G F +M YR++ + KP   + A IE     + E+++K R++F    TA  + +++P+
Sbjct: 267 PPDGAFDLMTYRLSTQVKPLIWVEAQIESHSRSRVEMLIKARSQFKERSTATNVEIELPV 326

Query: 302 PTFTTRVSFELEPGAVGNTTDFKEANKRLEWEMSKLNIWLPLLIHVSWQIVGGSEHTLHA 361
           PT  +  +     G+     + K+A   L W++                  G  E+ L A
Sbjct: 327 PTDASNPTVRTSLGSASYAPE-KDA---LVWKIK--------------SFPGNKEYMLRA 386

Query: 362 RLTF-SQEAHGNIVKEAGLVSMTFTIPMYNASRLQVKYLQIAKKSNTYNPYRWVKYVTQA 389
                S  A     +    + + F IP +  S +QV+YL+I +KS  Y    WV+Y+T A
Sbjct: 387 EFHLPSITAEEATPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSG-YQALPWVRYITMA 427

The following BLAST results are available for this feature:

BLAST of Sed0016251 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899311.1	3.4e-123	59.32	AP-4 complex subunit mu [Benincasa hispida]	[more]
XP_022981817.1	1.0e-122	58.69	AP-4 complex subunit mu-like [Cucurbita maxima] >XP_022981818.1 AP-4 complex sub...	[more]
XP_022940552.1	1.0e-122	58.69	AP-4 complex subunit mu-like [Cucurbita moschata] >XP_022940553.1 AP-4 complex s...	[more]
XP_004147850.2	1.3e-122	58.90	AP-4 complex subunit mu [Cucumis sativus] >KGN59994.1 hypothetical protein Csa_0...	[more]
XP_008466524.1	2.9e-122	58.90	PREDICTED: AP-4 complex subunit mu [Cucumis melo]	[more]

BLAST of Sed0016251 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SB50	1.8e-106	52.14	AP-4 complex subunit mu OS=Arabidopsis thaliana OX=3702 GN=AP4M PE=2 SV=1	[more]
P54672	9.0e-26	26.23	AP-2 complex subunit mu OS=Dictyostelium discoideum OX=44689 GN=apm2 PE=2 SV=2	[more]
Q32Q06	1.7e-24	27.16	AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3	[more]
Q2KJ81	2.2e-24	27.16	AP-1 complex subunit mu-1 OS=Bos taurus OX=9913 GN=AP1M1 PE=1 SV=3	[more]
Q9BXS5	2.2e-24	27.16	AP-1 complex subunit mu-1 OS=Homo sapiens OX=9606 GN=AP1M1 PE=1 SV=3	[more]

BLAST of Sed0016251 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IV20	4.8e-123	58.69	AP-4 complex subunit mu-like OS=Cucurbita maxima OX=3661 GN=LOC111480852 PE=3 SV...	[more]
A0A6J1FJY0	4.8e-123	58.69	AP-4 complex subunit mu-like OS=Cucurbita moschata OX=3662 GN=LOC111446118 PE=3 ...	[more]
A0A0A0LGF2	6.3e-123	58.90	MHD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G860300 PE=3 SV...	[more]
A0A1S3CRM0	1.4e-122	58.90	AP-4 complex subunit mu OS=Cucumis melo OX=3656 GN=LOC103503915 PE=3 SV=1	[more]
A0A6J1FAX7	1.8e-122	58.90	AP-4 complex subunit mu OS=Cucurbita moschata OX=3662 GN=LOC111443665 PE=3 SV=1	[more]

BLAST of Sed0016251 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24550.2	1.3e-107	52.14	Clathrin adaptor complexes medium subunit family protein	[more]
AT4G24550.1	2.3e-72	47.51	Clathrin adaptor complexes medium subunit family protein	[more]
AT4G24550.3	7.2e-71	47.35	Clathrin adaptor complexes medium subunit family protein	[more]
AT5G46630.1	2.1e-25	30.88	Clathrin adaptor complexes medium subunit family protein	[more]
AT1G60780.1	8.7e-24	25.34	Clathrin adaptor complexes medium subunit family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001392	Clathrin adaptor, mu subunit	PIRSF	PIRSF005992	AP_complex_mu	coord: 133..388 e-value: 8.1E-42 score: 141.7 coord: 1..97 e-value: 5.0E-9 score: 33.5
None	No IPR available	GENE3D	3.30.450.60		coord: 28..98 e-value: 5.8E-11 score: 44.6
None	No IPR available	GENE3D	2.60.40.1170	Mu homology domain, subdomain B	coord: 339..383 e-value: 7.0E-6 score: 27.8
None	No IPR available	GENE3D	2.60.40.1170	Mu homology domain, subdomain B	coord: 222..299 e-value: 7.3E-16 score: 60.3
None	No IPR available	PANTHER	PTHR10529	AP COMPLEX SUBUNIT MU	coord: 2..25
None	No IPR available	PANTHER	PTHR10529:SF347	AP-4 COMPLEX SUBUNIT MU-LIKE	coord: 2..25
None	No IPR available	PANTHER	PTHR10529	AP COMPLEX SUBUNIT MU	coord: 56..115
None	No IPR available	PANTHER	PTHR10529	AP COMPLEX SUBUNIT MU	coord: 166..388
None	No IPR available	PANTHER	PTHR10529:SF347	AP-4 COMPLEX SUBUNIT MU-LIKE	coord: 166..388 coord: 56..115
IPR028565	Mu homology domain	PFAM	PF00928	Adap_comp_sub	coord: 175..387 e-value: 1.8E-44 score: 152.1
IPR028565	Mu homology domain	PROSITE	PS51072	MHD	coord: 118..387 score: 21.620256
IPR036168	AP-2 complex subunit mu, C-terminal superfamily	SUPERFAMILY	49447	Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	coord: 166..387
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 1..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016251.1	Sed0016251.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0030131	clathrin adaptor complex
cellular_component	GO:0005794	Golgi apparatus