Sed0016194 (gene) Chayote v1

Overview


Name	Sed0016194
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Protein of unknown function (DUF1118)
Location	LG01: 13482683 .. 13483890 (+)
RNA-Seq Expression	Sed0016194
Synteny	Sed0016194

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCCCCTTGAAAGAGCCATTTAGTATTTGATTTTTTCCCCTTTGAACAAAAACAATTTTAAAGGAAAAATAAAAGAAAGAGCAAATAAGAATACACAGTTGTGTGTTTTTAGTTAAATGATTGGGAGAAGATAAAGCAATAAAGAGAATGATTGGTGGAGACGAGATTACACTCTGTAATTGCTGAAACCTAAATTCCTTTCTCAACCTTCCATTTCTCCTCAACAATGGCGGTCGCTTCACCATGTTCCTCCCAGCTTCCCAATCTCCTCCCTCAAAGCCGCTTCTCCATCACCAGATTCAAACACGCCTCAATTGCTTCCTCCAGATCCAGATCCAGATCCGCTCCCCTCGCAATCACCGCCATGGCCCCTCAGAACAAGGTACCGCAAACCTCCTCTCCAATTTTCAATCTCTCTCTCTCTTTCAATTTCACACTGAGAATCGAAATCGAAACGGACGGATTCAGGTGAACCGATACGACGGCGCGTGGGAGAAGAAGTGGTTCGGAGCCGGAATCTTCTACGAGAGCTCCGAGGACGTGGAGGTGGACGTGTTCAAGAAGCTGGAGACCAAGAAGGTGCTGAGCAACGTCGAGAAGGCGGGGCTGTTGTCCAAAGCCGAGGAGTTAGGGTTTACGCTCTCTTCGATTGAGAAATTGGGGGTTTTCTCCAAGGCCGAGGAGTTAGGGCTTTTGAGTTTGCTCGAGAAACTTGCCGCCTCTTCTCCCTCCGTTTTGGCCTCCCTTGCCCTTCCCACCCTCGTGGCGGCGCTCGCCGCGGTTCTTCTCATTCCCGACGACTCGGCGGCGCTTGTGGCCTTGCAGGCGGTGCTCGCCGGCGGACTCGCGCTTGGGGCTGCCGCCTTGCTGGTTGGCTCGGTGCTGCTGGGCGGCTTGCAGGAAGCTGATTGAACTCAATTCAGGTTTCAAATTGAAATTGTTTTGTGTAATTAAGAATCATAAACTGGTTTTTAACTCGTGTGAATTAGGGGAGGAGGACAAATACCGATTCTCGAGTTCGAACAACCAATCATTAAACCATTCGGTGTGGATTAGTAAATACCCTGCTTCACTCATTTTTTTTTAACTTATTTTAATTTTGATCTGCCATTAGTTTAAAAAGTGGAGTGAAATGGAATAGTTAAATATAGTTAGGGTAGTTACATATTCATTTGGAGTGTTTGTTTTTTTGATGATTCTATTCCTCA

mRNA sequence

TGCCCCTTGAAAGAGCCATTTAGTATTTGATTTTTTCCCCTTTGAACAAAAACAATTTTAAAGGAAAAATAAAAGAAAGAGCAAATAAGAATACACAGTTGTGTGTTTTTAGTTAAATGATTGGGAGAAGATAAAGCAATAAAGAGAATGATTGGTGGAGACGAGATTACACTCTGTAATTGCTGAAACCTAAATTCCTTTCTCAACCTTCCATTTCTCCTCAACAATGGCGGTCGCTTCACCATGTTCCTCCCAGCTTCCCAATCTCCTCCCTCAAAGCCGCTTCTCCATCACCAGATTCAAACACGCCTCAATTGCTTCCTCCAGATCCAGATCCAGATCCGCTCCCCTCGCAATCACCGCCATGGCCCCTCAGAACAAGGTGAACCGATACGACGGCGCGTGGGAGAAGAAGTGGTTCGGAGCCGGAATCTTCTACGAGAGCTCCGAGGACGTGGAGGTGGACGTGTTCAAGAAGCTGGAGACCAAGAAGGTGCTGAGCAACGTCGAGAAGGCGGGGCTGTTGTCCAAAGCCGAGGAGTTAGGGTTTACGCTCTCTTCGATTGAGAAATTGGGGGTTTTCTCCAAGGCCGAGGAGTTAGGGCTTTTGAGTTTGCTCGAGAAACTTGCCGCCTCTTCTCCCTCCGTTTTGGCCTCCCTTGCCCTTCCCACCCTCGTGGCGGCGCTCGCCGCGGTTCTTCTCATTCCCGACGACTCGGCGGCGCTTGTGGCCTTGCAGGCGGTGCTCGCCGGCGGACTCGCGCTTGGGGCTGCCGCCTTGCTGGTTGGCTCGGTGCTGCTGGGCGGCTTGCAGGAAGCTGATTGAACTCAATTCAGGTTTCAAATTGAAATTGTTTTGTGTAATTAAGAATCATAAACTGGTTTTTAACTCGTGTGAATTAGGGGAGGAGGACAAATACCGATTCTCGAGTTCGAACAACCAATCATTAAACCATTCGGTGTGGATTAGTAAATACCCTGCTTCACTCATTTTTTTTTAACTTATTTTAATTTTGATCTGCCATTAGTTTAAAAAGTGGAGTGAAATGGAATAGTTAAATATAGTTAGGGTAGTTACATATTCATTTGGAGTGTTTGTTTTTTTGATGATTCTATTCCTCA

Coding sequence (CDS)

ATGGCGGTCGCTTCACCATGTTCCTCCCAGCTTCCCAATCTCCTCCCTCAAAGCCGCTTCTCCATCACCAGATTCAAACACGCCTCAATTGCTTCCTCCAGATCCAGATCCAGATCCGCTCCCCTCGCAATCACCGCCATGGCCCCTCAGAACAAGGTGAACCGATACGACGGCGCGTGGGAGAAGAAGTGGTTCGGAGCCGGAATCTTCTACGAGAGCTCCGAGGACGTGGAGGTGGACGTGTTCAAGAAGCTGGAGACCAAGAAGGTGCTGAGCAACGTCGAGAAGGCGGGGCTGTTGTCCAAAGCCGAGGAGTTAGGGTTTACGCTCTCTTCGATTGAGAAATTGGGGGTTTTCTCCAAGGCCGAGGAGTTAGGGCTTTTGAGTTTGCTCGAGAAACTTGCCGCCTCTTCTCCCTCCGTTTTGGCCTCCCTTGCCCTTCCCACCCTCGTGGCGGCGCTCGCCGCGGTTCTTCTCATTCCCGACGACTCGGCGGCGCTTGTGGCCTTGCAGGCGGTGCTCGCCGGCGGACTCGCGCTTGGGGCTGCCGCCTTGCTGGTTGGCTCGGTGCTGCTGGGCGGCTTGCAGGAAGCTGATTGA

Protein sequence

MAVASPCSSQLPNLLPQSRFSITRFKHASIASSRSRSRSAPLAITAMAPQNKVNRYDGAWEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKLAASSPSVLASLALPTLVAALAAVLLIPDDSAALVALQAVLAGGLALGAAALLVGSVLLGGLQEAD

Homology

[Close]

BLAST of Sed0016194 vs. NCBI nr
Match: XP_023000865.1 (uncharacterized protein LOC111495182 [Cucurbita maxima] >XP_023000866.1 uncharacterized protein LOC111495182 [Cucurbita maxima])

HSP 1 Score: 270.0 bits (689), Expect = 1.6e-68
Identity = 160/196 (81.63%), Postives = 172/196 (87.76%), Query Frame = 0


Query: 5   SPCSSQLPNLLPQSRFSITRFKHAS-IASSRSRSRSAPLAITAMAPQNKVNRYDGAWEKK 64
           SP SS  P+LLP +RFSI+RF+HAS  A  R  SRS PL I AMA Q KVN+YD  WEKK
Sbjct: 7   SPSSSAAPSLLP-NRFSISRFRHASNHARPRPSSRSNPLRILAMASQKKVNKYDDGWEKK 66

Query: 65  WFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAE 124
           WFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAE
Sbjct: 67  WFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAE 126

Query: 125 ELGLLSLLEKLAASSPSVLASLALPTLVAALAAVLLIPDDSAALVALQAVLAGGLALGAA 184
           E GLLSLLEK+A++SPS LASLALP LVAALAA++LIPDDSA LVALQAV+AGGL LGAA
Sbjct: 127 EFGLLSLLEKVASASPSTLASLALPILVAALAAIVLIPDDSAPLVALQAVVAGGLTLGAA 186

Query: 185 ALLVGSVLLGGLQEAD 200
            L VGSV+LGGLQEAD
Sbjct: 187 GLFVGSVVLGGLQEAD 201

[Close]

BLAST of Sed0016194 vs. NCBI nr
Match: XP_023519139.1 (uncharacterized protein LOC111782592 [Cucurbita pepo subsp. pepo] >XP_023519140.1 uncharacterized protein LOC111782592 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.5 bits (685), Expect = 4.7e-68
Identity = 160/196 (81.63%), Postives = 171/196 (87.24%), Query Frame = 0


Query: 5   SPCSSQLPNLLPQSRFSITRFKHAS-IASSRSRSRSAPLAITAMAPQNKVNRYDGAWEKK 64
           SP SS  P+LLP +RFSI+RF+HAS  A  R  S S  L I AMAPQ KVN+YD  WEKK
Sbjct: 7   SPSSSAAPSLLP-NRFSISRFRHASNHARPRPSSGSNSLRILAMAPQKKVNKYDDGWEKK 66

Query: 65  WFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAE 124
           WFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAE
Sbjct: 67  WFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAE 126

Query: 125 ELGLLSLLEKLAASSPSVLASLALPTLVAALAAVLLIPDDSAALVALQAVLAGGLALGAA 184
           E GLLSLLEKLA++SPS LASLALP LVAALAA++LIPDDSA LVALQAV+AGGL LGAA
Sbjct: 127 EFGLLSLLEKLASASPSTLASLALPILVAALAAIVLIPDDSAPLVALQAVVAGGLTLGAA 186

Query: 185 ALLVGSVLLGGLQEAD 200
            L VGSV+LGGLQEAD
Sbjct: 187 GLFVGSVVLGGLQEAD 201

[Close]

BLAST of Sed0016194 vs. NCBI nr
Match: XP_022923829.1 (uncharacterized protein LOC111431427 [Cucurbita moschata] >XP_022923830.1 uncharacterized protein LOC111431427 [Cucurbita moschata])

HSP 1 Score: 267.3 bits (682), Expect = 1.0e-67
Identity = 159/196 (81.12%), Postives = 171/196 (87.24%), Query Frame = 0


Query: 5   SPCSSQLPNLLPQSRFSITRFKHAS-IASSRSRSRSAPLAITAMAPQNKVNRYDGAWEKK 64
           SP SS  P+LLP +RFSI+RF+HAS  A  R  S S  L I AMAPQ KVN+YD  WEKK
Sbjct: 7   SPSSSAAPSLLP-NRFSISRFRHASNHARPRPSSGSNSLRILAMAPQKKVNKYDDGWEKK 66

Query: 65  WFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAE 124
           WFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAE
Sbjct: 67  WFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAE 126

Query: 125 ELGLLSLLEKLAASSPSVLASLALPTLVAALAAVLLIPDDSAALVALQAVLAGGLALGAA 184
           E GLLSLLEK+A++SPS LASLALP LVAALAA++LIPDDSA LVALQAV+AGGL LGAA
Sbjct: 127 EFGLLSLLEKVASASPSTLASLALPILVAALAAIVLIPDDSAPLVALQAVVAGGLTLGAA 186

Query: 185 ALLVGSVLLGGLQEAD 200
            L VGSV+LGGLQEAD
Sbjct: 187 GLFVGSVVLGGLQEAD 201

[Close]

BLAST of Sed0016194 vs. NCBI nr
Match: XP_004152441.1 (uncharacterized protein LOC101214681 [Cucumis sativus] >KGN64256.1 hypothetical protein Csa_013525 [Cucumis sativus])

HSP 1 Score: 266.2 bits (679), Expect = 2.3e-67
Identity = 158/198 (79.80%), Postives = 170/198 (85.86%), Query Frame = 0


Query: 5   SPCSSQLPNLLPQSRFSITRFKHASIASSR---SRSRSAPLAITAMAPQNKVNRYDGAWE 64
           SP SS  P     +RFSI+RF H S  + R   S SRS PL I AMAPQ KVN+YD AWE
Sbjct: 7   SPSSSTAPLSHLHNRFSISRFHHISNYARRRPFSSSRSNPLTIFAMAPQKKVNKYDDAWE 66

Query: 65  KKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSK 124
           KKWFGAGIFYES+EDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSK
Sbjct: 67  KKWFGAGIFYESAEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSK 126

Query: 125 AEELGLLSLLEKLAASSPSVLASLALPTLVAALAAVLLIPDDSAALVALQAVLAGGLALG 184
           AEELGLLSLLEK+A+SSPS LASLALP LVAAL A+++IPDDS ALVALQAV+ GGLALG
Sbjct: 127 AEELGLLSLLEKVASSSPSALASLALPILVAALVAIVVIPDDSVALVALQAVVGGGLALG 186

Query: 185 AAALLVGSVLLGGLQEAD 200
           AA LLVGSV+LGGLQEAD
Sbjct: 187 AAGLLVGSVVLGGLQEAD 204

[Close]

BLAST of Sed0016194 vs. NCBI nr
Match: KAG6584260.1 (hypothetical protein SDJN03_20192, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019856.1 hypothetical protein SDJN02_18821 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 264.6 bits (675), Expect = 6.8e-67
Identity = 158/196 (80.61%), Postives = 170/196 (86.73%), Query Frame = 0


Query: 5   SPCSSQLPNLLPQSRFSITRFKHAS-IASSRSRSRSAPLAITAMAPQNKVNRYDGAWEKK 64
           SP SS  P+LL  +RFSI+RF+HAS  A  R  S S  L I AMAPQ KVN+YD  WEKK
Sbjct: 7   SPSSSAAPSLL-HNRFSISRFRHASNHARPRPSSGSNSLRILAMAPQKKVNKYDDGWEKK 66

Query: 65  WFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAE 124
           WFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAE
Sbjct: 67  WFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAE 126

Query: 125 ELGLLSLLEKLAASSPSVLASLALPTLVAALAAVLLIPDDSAALVALQAVLAGGLALGAA 184
           E GLLSLLEK+A++SPS LASLALP LVAALAA++LIPDDSA LVALQAV+AGGL LGAA
Sbjct: 127 EFGLLSLLEKVASASPSTLASLALPILVAALAAIVLIPDDSAPLVALQAVVAGGLTLGAA 186

Query: 185 ALLVGSVLLGGLQEAD 200
            L VGSV+LGGLQEAD
Sbjct: 187 GLFVGSVVLGGLQEAD 201

[Close]

BLAST of Sed0016194 vs. ExPASy TrEMBL
Match: A0A6J1KJH4 (uncharacterized protein LOC111495182 OS=Cucurbita maxima OX=3661 GN=LOC111495182 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 7.8e-69
Identity = 160/196 (81.63%), Postives = 172/196 (87.76%), Query Frame = 0


Query: 5   SPCSSQLPNLLPQSRFSITRFKHAS-IASSRSRSRSAPLAITAMAPQNKVNRYDGAWEKK 64
           SP SS  P+LLP +RFSI+RF+HAS  A  R  SRS PL I AMA Q KVN+YD  WEKK
Sbjct: 7   SPSSSAAPSLLP-NRFSISRFRHASNHARPRPSSRSNPLRILAMASQKKVNKYDDGWEKK 66

Query: 65  WFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAE 124
           WFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAE
Sbjct: 67  WFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAE 126

Query: 125 ELGLLSLLEKLAASSPSVLASLALPTLVAALAAVLLIPDDSAALVALQAVLAGGLALGAA 184
           E GLLSLLEK+A++SPS LASLALP LVAALAA++LIPDDSA LVALQAV+AGGL LGAA
Sbjct: 127 EFGLLSLLEKVASASPSTLASLALPILVAALAAIVLIPDDSAPLVALQAVVAGGLTLGAA 186

Query: 185 ALLVGSVLLGGLQEAD 200
            L VGSV+LGGLQEAD
Sbjct: 187 GLFVGSVVLGGLQEAD 201

[Close]

BLAST of Sed0016194 vs. ExPASy TrEMBL
Match: A0A6J1E7H0 (uncharacterized protein LOC111431427 OS=Cucurbita moschata OX=3662 GN=LOC111431427 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 5.1e-68
Identity = 159/196 (81.12%), Postives = 171/196 (87.24%), Query Frame = 0


Query: 5   SPCSSQLPNLLPQSRFSITRFKHAS-IASSRSRSRSAPLAITAMAPQNKVNRYDGAWEKK 64
           SP SS  P+LLP +RFSI+RF+HAS  A  R  S S  L I AMAPQ KVN+YD  WEKK
Sbjct: 7   SPSSSAAPSLLP-NRFSISRFRHASNHARPRPSSGSNSLRILAMAPQKKVNKYDDGWEKK 66

Query: 65  WFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAE 124
           WFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAE
Sbjct: 67  WFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAE 126

Query: 125 ELGLLSLLEKLAASSPSVLASLALPTLVAALAAVLLIPDDSAALVALQAVLAGGLALGAA 184
           E GLLSLLEK+A++SPS LASLALP LVAALAA++LIPDDSA LVALQAV+AGGL LGAA
Sbjct: 127 EFGLLSLLEKVASASPSTLASLALPILVAALAAIVLIPDDSAPLVALQAVVAGGLTLGAA 186

Query: 185 ALLVGSVLLGGLQEAD 200
            L VGSV+LGGLQEAD
Sbjct: 187 GLFVGSVVLGGLQEAD 201

[Close]

BLAST of Sed0016194 vs. ExPASy TrEMBL
Match: A0A0A0LW40 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045540 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.1e-67
Identity = 158/198 (79.80%), Postives = 170/198 (85.86%), Query Frame = 0


Query: 5   SPCSSQLPNLLPQSRFSITRFKHASIASSR---SRSRSAPLAITAMAPQNKVNRYDGAWE 64
           SP SS  P     +RFSI+RF H S  + R   S SRS PL I AMAPQ KVN+YD AWE
Sbjct: 7   SPSSSTAPLSHLHNRFSISRFHHISNYARRRPFSSSRSNPLTIFAMAPQKKVNKYDDAWE 66

Query: 65  KKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSK 124
           KKWFGAGIFYES+EDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSK
Sbjct: 67  KKWFGAGIFYESAEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSK 126

Query: 125 AEELGLLSLLEKLAASSPSVLASLALPTLVAALAAVLLIPDDSAALVALQAVLAGGLALG 184
           AEELGLLSLLEK+A+SSPS LASLALP LVAAL A+++IPDDS ALVALQAV+ GGLALG
Sbjct: 127 AEELGLLSLLEKVASSSPSALASLALPILVAALVAIVVIPDDSVALVALQAVVGGGLALG 186

Query: 185 AAALLVGSVLLGGLQEAD 200
           AA LLVGSV+LGGLQEAD
Sbjct: 187 AAGLLVGSVVLGGLQEAD 204

[Close]

BLAST of Sed0016194 vs. ExPASy TrEMBL
Match: A0A6J1C8G3 (uncharacterized protein LOC111008941 OS=Momordica charantia OX=3673 GN=LOC111008941 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.6e-66
Identity = 158/204 (77.45%), Postives = 173/204 (84.80%), Query Frame = 0


Query: 1   MAVASPCS-----SQLPNLLPQSRFSITRFKHASIASSRSRSRSAPLAITAMAPQNKVNR 60
           MAVASP S     +  P+ LP   FS ++F+HA   +    SRS  L I AMAP+ KVN+
Sbjct: 1   MAVASPSSAAAAATAAPSHLPNKFFS-SKFRHAFNHARALPSRSNSLTIVAMAPKKKVNK 60

Query: 61  YDGAWEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEK 120
           YD  W+KKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEK
Sbjct: 61  YDDGWQKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEK 120

Query: 121 LGVFSKAEELGLLSLLEKLAASSPSVLASLALPTLVAALAAVLLIPDDSAALVALQAVLA 180
           LGVFSKAEELGLLSLLEK+A+SSPS LASLALP LVAALAA++LIPDDSAALVALQAV+ 
Sbjct: 121 LGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSAALVALQAVVG 180

Query: 181 GGLALGAAALLVGSVLLGGLQEAD 200
           GGLALGAA LLVGSV+LGGLQEAD
Sbjct: 181 GGLALGAAGLLVGSVVLGGLQEAD 203

[Close]

BLAST of Sed0016194 vs. ExPASy TrEMBL
Match: A0A5D3BL78 (DUF1118 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003100 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 8.1e-66
Identity = 155/197 (78.68%), Postives = 166/197 (84.26%), Query Frame = 0


Query: 5   SPCSSQLPNLLPQSRFSITRFKHASIASSR--SRSRSAPLAITAMAPQNKVNRYDGAWEK 64
           SP SS      P +RFSI+R  H S    R    SRS PL I AMAPQ KVN+YD AWEK
Sbjct: 8   SPSSSTASLSHPPNRFSISRIHHISNHPRRPFPSSRSNPLTIVAMAPQKKVNKYDDAWEK 67

Query: 65  KWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKA 124
           KWFGAGIFYES+EDVEVDVFKKLETKKVLSNVEKAGLLSKAEELG TLSSIEKLGVFSKA
Sbjct: 68  KWFGAGIFYESAEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGVTLSSIEKLGVFSKA 127

Query: 125 EELGLLSLLEKLAASSPSVLASLALPTLVAALAAVLLIPDDSAALVALQAVLAGGLALGA 184
           EELGLLSLLEK+A+SSPS LASLALP LVAAL A+++IPDDS ALVALQAV+ GGLALGA
Sbjct: 128 EELGLLSLLEKVASSSPSALASLALPILVAALVAIVVIPDDSVALVALQAVVGGGLALGA 187

Query: 185 AALLVGSVLLGGLQEAD 200
           A LLVGSV+LGGLQEAD
Sbjct: 188 AGLLVGSVVLGGLQEAD 204

[Close]

BLAST of Sed0016194 vs. TAIR 10
Match: AT1G74730.1 (Protein of unknown function (DUF1118) )

HSP 1 Score: 200.7 bits (509), Expect = 1.1e-51
Identity = 124/199 (62.31%), Postives = 148/199 (74.37%), Query Frame = 0


Query: 3   VASPCSSQLPNLLPQ--SRFSITRFKHASIASSRSRSRSAPLAITAMAPQNKVNRYDGAW 62
           V +P SS    L  Q  S   + RF+  S ++ +S    A  ++ AMAPQ KVN+YD  W
Sbjct: 4   VGAPISSPAAQLQTQFLSNPILPRFRR-SFSTGKS---PATFSVVAMAPQKKVNKYDAKW 63

Query: 63  EKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFS 122
           +K+W+GAG+F+E SE + VDVFKKLE +KVLSNVEK+GLLSKAE LG TLSS+EKL VFS
Sbjct: 64  KKQWYGAGLFFEGSEQINVDVFKKLEKRKVLSNVEKSGLLSKAEGLGLTLSSLEKLKVFS 123

Query: 123 KAEELGLLSLLEKLAASSPSVLASLALPTLVAALAAVLLIPDDSAALVALQAVLAGGLAL 182
           KAE+LGLLSLLE LA +SP+VLAS ALP L AA+ AV+LIPDDS  LV  QAVLAG LAL
Sbjct: 124 KAEDLGLLSLLENLAGTSPAVLASAALPALTAAIVAVVLIPDDSTTLVVAQAVLAGALAL 183

Query: 183 GAAALLVGSVLLGGLQEAD 200
               LLVGSV+L GLQEAD
Sbjct: 184 TGVVLLVGSVVLDGLQEAD 198

[Close]

BLAST of Sed0016194 vs. TAIR 10
Match: AT5G08050.1 (Protein of unknown function (DUF1118) )

HSP 1 Score: 58.2 bits (139), Expect = 9.0e-09
Identity = 46/128 (35.94%), Postives = 75/128 (58.59%), Query Frame = 0


Query: 72  ESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLL 131
           +S+   +V +  ++E  K+L+  EKAGLLS AE+ GF+LS+IE+LG+ +KAEE G+LS  
Sbjct: 33  KSTATPQVKLLTRVEQLKLLTKAEKAGLLSLAEKSGFSLSTIERLGLLTKAEEFGVLSAA 92

Query: 132 EKLAASSPSVLASLALPTLVAALAAVLLIPDDSAALVALQAVLAGGLALGAAALLVGSVL 191
                 +P  L +L+L  L+       ++P+D    V +Q ++A    LG +A    S  
Sbjct: 93  TN--PETPGTLFTLSLGLLLLGPVFAYVVPEDYTWEVVIQVLVALLSVLGGSAAFAASGF 152

Query: 192 LGGLQEAD 200
           +  LQ++D
Sbjct: 153 VSNLQKSD 158

The following BLAST results are available for this feature:

BLAST of Sed0016194 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023000865.1	1.6e-68	81.63	uncharacterized protein LOC111495182 [Cucurbita maxima] >XP_023000866.1 uncharac...	[more]
XP_023519139.1	4.7e-68	81.63	uncharacterized protein LOC111782592 [Cucurbita pepo subsp. pepo] >XP_023519140....	[more]
XP_022923829.1	1.0e-67	81.12	uncharacterized protein LOC111431427 [Cucurbita moschata] >XP_022923830.1 unchar...	[more]
XP_004152441.1	2.3e-67	79.80	uncharacterized protein LOC101214681 [Cucumis sativus] >KGN64256.1 hypothetical ...	[more]
KAG6584260.1	6.8e-67	80.61	hypothetical protein SDJN03_20192, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0016194 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0016194 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KJH4	7.8e-69	81.63	uncharacterized protein LOC111495182 OS=Cucurbita maxima OX=3661 GN=LOC111495182...	[more]
A0A6J1E7H0	5.1e-68	81.12	uncharacterized protein LOC111431427 OS=Cucurbita moschata OX=3662 GN=LOC1114314...	[more]
A0A0A0LW40	1.1e-67	79.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045540 PE=4 SV=1	[more]
A0A6J1C8G3	1.6e-66	77.45	uncharacterized protein LOC111008941 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A5D3BL78	8.1e-66	78.68	DUF1118 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Sed0016194 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74730.1	1.1e-51	62.31	Protein of unknown function (DUF1118)	[more]
AT5G08050.1	9.0e-09	35.94	Protein of unknown function (DUF1118)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009500	Protein of unknown function DUF1118	PFAM	PF06549	DUF1118	coord: 84..198 e-value: 1.6E-44 score: 150.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016194.1	Sed0016194.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032774	RNA biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity