Sed0016179 (gene) Chayote v1

Overview


Name	Sed0016179
Type	gene
Organism	Sechium edule (Chayote v1)
Description	recA DNA recombination family protein
Location	LG03: 11893005 .. 11897097 (-)
RNA-Seq Expression	Sed0016179
Synteny	Sed0016179

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGAAAAAAAAAAAAATCAGAAACCTAAAAATGGCAGAGCTCAGTGAATATTCAAAAATGGCCGCGTCTTCTTCTTCGTCTCGCTGTTTCAATTTCAATTTCACTCCTGTGTAACTCTTGAAGCAGCTTTTAGTGATCTCCAGTCGCTGTAAAGCCAAGTTAGGTCTCCATTTTGGTTGCTTAGAAGAGGTTTAATGGCGAGGCTTTTCCGAAACGCGTCTTTTTTCGGGCGCTCTCTTTTTCAGCATGAGGTTTCATTCATTAACACTGCGTTATTTTGTTGTGGCGTTTGATTACTTTAACTCCGTTTATGATCTACAGCGAACTTTTTTTTTTTTTTTTTTTTTGTGTGTGGCAGTGATCTTCAGTGAATCTTATTTGTGGAACGAATTTAACTAGAATATTTTAGCTAATTTCTATTTTTTGTGTCGTTTGGATTGTTACCTGACGATTAAGCTTGTGCTTGTTTTCTTTGCAGGGTTTGAGGAGAGTCATATTGGGAACATCCACTCAAGTTTGCAGTTTTTCTACCAAAGGTGCGAAATATTAGCTTTAATTACATTATAATTTGTGAAGTGACGGTAGCCTAGTAGTGAAGAGAAGCTTAGAGAACTAAGAGTTTTATAAGTTCAATCCAAAGTAATTGCCTACATAGAAATCCAAAGTAATCTCCTTCGATGTCTCACCGTGCCTGGTTACCTTGATTTCAAATTTTTTTTATAGGGATTGTTTGGATGAGTAGTTGCATGAAGAGTTATTTTAAATGATTAGAAATTGAGTTTGTGAAGTGGATTTTTGGAGAGGAGTTGCGGATAATAACTTGTTTGGATTCTTGTAGAGGCGTTGCAACCAATAGCTCTTTTGGATGTAAATTTTGTAGAAAGGTTGTAGAAATGAGTGGTTTTGAAATGAGAAATTATTTTGAGTGATTAGAAATTAGTAGTTATTTTGAATGGTTGCAATAGCTCGATTGGATGTATTTTTTCAAGGAGGAATTGTAAATAATCATTTGTAAGTCCTCCACAAAACCAATAATCAAACACTCTTTGACAACTAAATGTAGAAAGGTCAGTGTCTAGTTAAAATAGTTAAAGTTTAAGCTCGTTCTGCCACTCATGGATGCAAAAAATAAAATAGGTTAATAGTTTTATAGCTTTGATGAACCTGTTGTGGAACAGACTGTTGACGTTTTAAGACAAGACTTTAGTACAAAGTGTATTTATTTATTTTGAGAAATTGATTCACATGTGGGCTTGAAGTGGATTAACCACAAGCTCATGTTGGCACGAAAACAAAATTTATTTATTTTTCAGTTTTTACGCATGTGCTATATATTCCATTCATTACAATGCATTTCAATATCAATATTGTGTCAATCTGAAGGAAAAAGAAAGTCCAAGTCATCAGATGGGAGTGATTCTTGTGGAGAAAATTTGTCTAAGAAAGAGCTGGCCTTACAACAAGCCTTGGATCAGATAACAGCCACATTTGGAAAGGGGTCTATCATGTGGCTTGGCCGCTCTGCACCATCTACTCATGTCCCTGTGGTTTCCACCGGTTCGTTCGTTCTGGATGCAGCTCTTGGAATTGGCGGTATACCTAAGGTATCTTACCCTTCATTATGATGTCTATGTGAGGTCAAAACATTTTATTGATCACAGATTTTCAAATTGTTGTACCTTTTTGTTTTGAAGTCTCTTTGAAGTGTTTTCCCCTTAAACCCTGTATTTCCCATTGTTTCTTCTTGTTTAAATTGTACTGGTACATCATGCCTGTGTTTCATGTTTGTGGTATAACTTCATTAGATCTTTTTAGGGTCGTGTAACTGAAATTTATGGTCCAGAGGCATCTGGAAAGACAACTCTTGCTCTGCATGTTATTGCTGAATCCCAGAAGCAAGGAGGTACTTACATGAAAACTGATTGTGCCTGTTCATTTTACAACATATATTTCCATGTGTGTATACTTTATAATTAGTACTAGTACTAGCTTATGCTTGTATTTAGCTGAAACTCTTATGTATATAATATGAAAAACCAAATCTTCTTAGAGAAAATGATATGCAATTGGGAAATTCAAAGTACCAGGCTTCCAGCCTGAAACTAAAGAGGCCAAGACATTAAGGGAAAGACTCTAGTTGTTCAAAAATAAAGAGGAATGCACTTGCGATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTACAGACACTTGGAAGGTATGAAACTTAAACTTAAGTGAAGACCAAACCTCCCCCCAAGTTAGTTGTCTACACCCTGAAATCCTTTTGTCACACAAGTCAAATGTTCGTACCACAAAATTGCTAAAGTCTGTGTCTTTATTATTTATATCATCCTATGGGGAAGATGAAGAATGGGATGAAACTTAATTTGTTCTTATTCAAATTCAACAGTAATCGATATGCTTGGAGGTGATTTTTTTAGTAAAACGTCTCACTATATTACACAAAAACCTGCTTTTGAATTAATTTTTTTTGGTATTTTTAACGACAGGTTGCTGTGTTTTTGTTGATGCTGAGCATGCTCTTGATCCTGCCCTCGCTCAGGCTATTGGAGTGAACACTGAGAATCTGCTTCTATCTCAACCTGACTGTGGCGAACAAGCTCTTAGTCTCGTGGATACTCTAATCCGAAGTGGTTCAGTTGATGTTGTTGTCGTCGACAGTGTAAGTATGATGCAAAATCTTCTAAAGATGACTGTTGGAAAACTGATGTTTTATATGCTTAATGCTCTTTTTTCGGCACATCGTTAAATTGTGATTGCTTCTAATGACAGGTAGCTGCTCTAGTGCCTAAAGGTGAACTCGAGGGTGAGATGGGTGACGCCCATATGGCAATGCAGGCTAGACTCATGAGCCAAGCACTTCGCAAATTGAGCCATTCATTATCACTATCACAGACTATATTGATCTTTATCAATCAGGTATTGTTTCATTTTTCAACTCTCAGTAATATACTGCAATTTCTCACATTGTGATGCCATCCATTATGCCGTTGTTTGTTATAGTAGTATTGCACTTATTATTCGTATGCATCTCCAGGTAAGGTCAAAGCTGTCAACATTTGGAGGATTTGGTGGTCCAACTGAAGTTACCTGTGGTGGCAATGCCTTAAAATTTTATGCATCAATGCGACTTAATATTAGGAGGATAGGTCTTGTCAAGAAGGGGGAAGAGGTATAAACATTCATGTGCTAGTAAATTTGGATACCGACAATGCGAAGACGTTTTTCATGTATTCATAATATAGTACTCGATTGATTCGATGGTAGTTGGTTTCTTTTGATTGAGGCATTTGCTTCCGAAGTGTATGTTAATTTTTATGCACTTGTTTTGATTTCAGACGGTTGGAAGCCAAGTTCAAGTAAAAGTGGTGAAGAATAAGCTAGCTCCTCCATTTCGGACTGCTCAATTTGAGCTCGAGTTTGGTAAAGGTATCAGTAAGGAATCAGAGATTATAAATCTGGGACTGGAATACAAATTCATGTCCAAGGCAGGTGCTATGTATAGCCTTAATGGTCAAAGTTTCCGCGGCAAAGATGCCTTAAAAACTTTTCTATCTGAGAATGAAGATATTAGGGAAGAACTAGTTACGAAAATCCGGGATAAACTCCTTGATGTAGAGAGGGGTCAGCAACAAAATGGAGACGAAACCGAAGGAAGTCTCGGAGAAGATGTTATCACTTCACCCGAAGCTACAGATGAAGATGCTGTTACTGCTGTAGAAGTATAAATGTGTGAATGCCTTCTAATTCTAACTTCAAACATTTTTCATCCTTATTATCCTGAGTGCCACCTTGCCAAATGCTATCGGAGTTTCGCCGGGCACAAATTTTGGGTTTCGACGACATCGTAATATTGTTTAGTTTGTGCCTTCATGGAGTTTTAGTGATGGAAGATGATGTCCTTGTAAACATCAGCCATTTTCGTTGAGGATGAAATGTAAAAATGGAGATCTTAGCGAACCACAATGCAATATATTAAGGTTGCTCATCCGAAACTCCCATCGATGCCTGTCGATCGGGCATTTTTATTAGATCTACATATTAAATTTGAACAAA

mRNA sequence

CAAGAAAAAAAAAAAAATCAGAAACCTAAAAATGGCAGAGCTCAGTGAATATTCAAAAATGGCCGCGTCTTCTTCTTCGTCTCGCTGTTTCAATTTCAATTTCACTCCTGTGTAACTCTTGAAGCAGCTTTTAGTGATCTCCAGTCGCTGTAAAGCCAAGTTAGGTCTCCATTTTGGTTGCTTAGAAGAGGTTTAATGGCGAGGCTTTTCCGAAACGCGTCTTTTTTCGGGCGCTCTCTTTTTCAGCATGAGGGTTTGAGGAGAGTCATATTGGGAACATCCACTCAAGTTTGCAGTTTTTCTACCAAAGGAAAAAGAAAGTCCAAGTCATCAGATGGGAGTGATTCTTGTGGAGAAAATTTGTCTAAGAAAGAGCTGGCCTTACAACAAGCCTTGGATCAGATAACAGCCACATTTGGAAAGGGGTCTATCATGTGGCTTGGCCGCTCTGCACCATCTACTCATGTCCCTGTGGTTTCCACCGGTTCGTTCGTTCTGGATGCAGCTCTTGGAATTGGCGGTATACCTAAGGGTCGTGTAACTGAAATTTATGGTCCAGAGGCATCTGGAAAGACAACTCTTGCTCTGCATGTTATTGCTGAATCCCAGAAGCAAGGAGGTTGCTGTGTTTTTGTTGATGCTGAGCATGCTCTTGATCCTGCCCTCGCTCAGGCTATTGGAGTGAACACTGAGAATCTGCTTCTATCTCAACCTGACTGTGGCGAACAAGCTCTTAGTCTCGTGGATACTCTAATCCGAAGTGGTTCAGTTGATGTTGTTGTCGTCGACAGTGTAGCTGCTCTAGTGCCTAAAGGTGAACTCGAGGGTGAGATGGGTGACGCCCATATGGCAATGCAGGCTAGACTCATGAGCCAAGCACTTCGCAAATTGAGCCATTCATTATCACTATCACAGACTATATTGATCTTTATCAATCAGGTAAGGTCAAAGCTGTCAACATTTGGAGGATTTGGTGGTCCAACTGAAGTTACCTGTGGTGGCAATGCCTTAAAATTTTATGCATCAATGCGACTTAATATTAGGAGGATAGGTCTTGTCAAGAAGGGGGAAGAGACGGTTGGAAGCCAAGTTCAAGTAAAAGTGGTGAAGAATAAGCTAGCTCCTCCATTTCGGACTGCTCAATTTGAGCTCGAGTTTGGTAAAGGTATCAGTAAGGAATCAGAGATTATAAATCTGGGACTGGAATACAAATTCATGTCCAAGGCAGGTGCTATGTATAGCCTTAATGGTCAAAGTTTCCGCGGCAAAGATGCCTTAAAAACTTTTCTATCTGAGAATGAAGATATTAGGGAAGAACTAGTTACGAAAATCCGGGATAAACTCCTTGATGTAGAGAGGGGTCAGCAACAAAATGGAGACGAAACCGAAGGAAGTCTCGGAGAAGATGTTATCACTTCACCCGAAGCTACAGATGAAGATGCTGTTACTGCTGTAGAAGTATAAATGTGTGAATGCCTTCTAATTCTAACTTCAAACATTTTTCATCCTTATTATCCTGAGTGCCACCTTGCCAAATGCTATCGGAGTTTCGCCGGGCACAAATTTTGGGTTTCGACGACATCGTAATATTGTTTAGTTTGTGCCTTCATGGAGTTTTAGTGATGGAAGATGATGTCCTTGTAAACATCAGCCATTTTCGTTGAGGATGAAATGTAAAAATGGAGATCTTAGCGAACCACAATGCAATATATTAAGGTTGCTCATCCGAAACTCCCATCGATGCCTGTCGATCGGGCATTTTTATTAGATCTACATATTAAATTTGAACAAA

Coding sequence (CDS)

ATGGCGAGGCTTTTCCGAAACGCGTCTTTTTTCGGGCGCTCTCTTTTTCAGCATGAGGGTTTGAGGAGAGTCATATTGGGAACATCCACTCAAGTTTGCAGTTTTTCTACCAAAGGAAAAAGAAAGTCCAAGTCATCAGATGGGAGTGATTCTTGTGGAGAAAATTTGTCTAAGAAAGAGCTGGCCTTACAACAAGCCTTGGATCAGATAACAGCCACATTTGGAAAGGGGTCTATCATGTGGCTTGGCCGCTCTGCACCATCTACTCATGTCCCTGTGGTTTCCACCGGTTCGTTCGTTCTGGATGCAGCTCTTGGAATTGGCGGTATACCTAAGGGTCGTGTAACTGAAATTTATGGTCCAGAGGCATCTGGAAAGACAACTCTTGCTCTGCATGTTATTGCTGAATCCCAGAAGCAAGGAGGTTGCTGTGTTTTTGTTGATGCTGAGCATGCTCTTGATCCTGCCCTCGCTCAGGCTATTGGAGTGAACACTGAGAATCTGCTTCTATCTCAACCTGACTGTGGCGAACAAGCTCTTAGTCTCGTGGATACTCTAATCCGAAGTGGTTCAGTTGATGTTGTTGTCGTCGACAGTGTAGCTGCTCTAGTGCCTAAAGGTGAACTCGAGGGTGAGATGGGTGACGCCCATATGGCAATGCAGGCTAGACTCATGAGCCAAGCACTTCGCAAATTGAGCCATTCATTATCACTATCACAGACTATATTGATCTTTATCAATCAGGTAAGGTCAAAGCTGTCAACATTTGGAGGATTTGGTGGTCCAACTGAAGTTACCTGTGGTGGCAATGCCTTAAAATTTTATGCATCAATGCGACTTAATATTAGGAGGATAGGTCTTGTCAAGAAGGGGGAAGAGACGGTTGGAAGCCAAGTTCAAGTAAAAGTGGTGAAGAATAAGCTAGCTCCTCCATTTCGGACTGCTCAATTTGAGCTCGAGTTTGGTAAAGGTATCAGTAAGGAATCAGAGATTATAAATCTGGGACTGGAATACAAATTCATGTCCAAGGCAGGTGCTATGTATAGCCTTAATGGTCAAAGTTTCCGCGGCAAAGATGCCTTAAAAACTTTTCTATCTGAGAATGAAGATATTAGGGAAGAACTAGTTACGAAAATCCGGGATAAACTCCTTGATGTAGAGAGGGGTCAGCAACAAAATGGAGACGAAACCGAAGGAAGTCTCGGAGAAGATGTTATCACTTCACCCGAAGCTACAGATGAAGATGCTGTTACTGCTGTAGAAGTATAA

Protein sequence

MARLFRNASFFGRSLFQHEGLRRVILGTSTQVCSFSTKGKRKSKSSDGSDSCGENLSKKELALQQALDQITATFGKGSIMWLGRSAPSTHVPVVSTGSFVLDAALGIGGIPKGRVTEIYGPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIRRIGLVKKGEETVGSQVQVKVVKNKLAPPFRTAQFELEFGKGISKESEIINLGLEYKFMSKAGAMYSLNGQSFRGKDALKTFLSENEDIREELVTKIRDKLLDVERGQQQNGDETEGSLGEDVITSPEATDEDAVTAVEV

Homology

[Close]

BLAST of Sed0016179 vs. NCBI nr
Match: XP_038890910.1 (DNA repair protein recA homolog 3, mitochondrial [Benincasa hispida])

HSP 1 Score: 722.2 bits (1863), Expect = 2.5e-204
Identity = 375/422 (88.86%), Postives = 398/422 (94.31%), Query Frame = 0


Query: 1   MARLFRNASFFGRSLFQHEGLRRVILGTSTQVCSFSTKGKRKSKSSDGSDSCGENLSKKE 60
           MARL RNASF GRS+F HEG RR ILG STQ+C+FSTKGKRKSKSSDGSDSC EN SKKE
Sbjct: 1   MARLIRNASFLGRSIFHHEGYRRGILGASTQICNFSTKGKRKSKSSDGSDSCEENASKKE 60

Query: 61  LALQQALDQITATFGKGSIMWLGRSAPSTHVPVVSTGSFVLDAALGIGGIPKGRVTEIYG 120
           LALQQALDQIT++FGKGSIMWLGRS  S HVPVVSTGSF LD ALGIGG+PKGRV EIYG
Sbjct: 61  LALQQALDQITSSFGKGSIMWLGRSGSSRHVPVVSTGSFALDIALGIGGLPKGRVIEIYG 120

Query: 121 PEASGKTTLALHVIAESQKQGGCCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL 180
           PEASGKTTLALHVIAESQKQGG CVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL
Sbjct: 121 PEASGKTTLALHVIAESQKQGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL 180

Query: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240
           SLVDTLIRSGSVDVVVVDSVAALVPKGEL+GEMGDAHMAMQARLMSQALRKLSHSLSLSQ
Sbjct: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240

Query: 241 TILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIRRIGLVKKGEETVGSQVQ 300
           T+LIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYAS+RLNI+RIGLVKKGEET+GSQVQ
Sbjct: 241 TVLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETLGSQVQ 300

Query: 301 VKVVKNKLAPPFRTAQFELEFGKGISKESEIINLGLEYKFMSKAGAMYSLNGQSFRGKDA 360
           VKVVKNKLAPPFR AQFELEFGKGI K SEIINLGL+YKFMSKAGA+Y+ NG+SFRGKDA
Sbjct: 301 VKVVKNKLAPPFRIAQFELEFGKGICKLSEIINLGLKYKFMSKAGAIYNFNGRSFRGKDA 360

Query: 361 LKTFLSENEDIREELVTKIRDKLLDVERGQQQNGDETEGSLGEDVITSPEATDEDAVTAV 420
           LKTFLSEN+D REEL+TK+RD+LLDVE G+ +NGDETEGSL EDV TSP++TDEDAVTAV
Sbjct: 361 LKTFLSENDDAREELITKLRDQLLDVEMGKPRNGDETEGSLQEDVTTSPDSTDEDAVTAV 420

Query: 421 EV 423
           EV
Sbjct: 421 EV 422

[Close]

BLAST of Sed0016179 vs. NCBI nr
Match: XP_022154752.1 (DNA repair protein recA homolog 3, mitochondrial-like isoform X4 [Momordica charantia])

HSP 1 Score: 714.1 bits (1842), Expect = 6.9e-202
Identity = 374/422 (88.63%), Postives = 396/422 (93.84%), Query Frame = 0


Query: 1   MARLFRNASFFGRSLFQHEGLRRVILGTSTQVCSFSTKGKRKSKSSDGSDSCGENLSKKE 60
           MARL R+ASFF RSLF HEG RR ILGTSTQ+CSFSTKG+RKSKSSDGSDSC ENLSKKE
Sbjct: 1   MARLIRSASFFRRSLFHHEGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKKE 60

Query: 61  LALQQALDQITATFGKGSIMWLGRSAPSTHVPVVSTGSFVLDAALGIGGIPKGRVTEIYG 120
           LALQQALDQIT+TFGKGSIMWLGRS  S HVPVVSTGSF LD ALG+GG+PKGRV EIYG
Sbjct: 61  LALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPKGRVIEIYG 120

Query: 121 PEASGKTTLALHVIAESQKQGGCCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL 180
           PEASGKTTLALHVIAESQKQGG CVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL
Sbjct: 121 PEASGKTTLALHVIAESQKQGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL 180

Query: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240
           SLVDTLIRSGSVDVVVVDSVAALVPKGEL+GEMGDAHMAMQARLMSQALRKLSHSLSLSQ
Sbjct: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240

Query: 241 TILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIRRIGLVKKGEETVGSQVQ 300
           TILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNI+RIGLVKKGEET+GSQVQ
Sbjct: 241 TILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETLGSQVQ 300

Query: 301 VKVVKNKLAPPFRTAQFELEFGKGISKESEIINLGLEYKFMSKAGAMYSLNGQSFRGKDA 360
           VKVVKNKLAPPFRTAQFELEFGKGI KESEIINLGL+YKFMSKAGA YS NG+SF GKDA
Sbjct: 301 VKVVKNKLAPPFRTAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNGRSFHGKDA 360

Query: 361 LKTFLSENEDIREELVTKIRDKLLDVERGQQQNGDETEGSLGEDVITSPEATDEDAVTAV 420
           LKTFL++N D REEL+TK+RDKLLD++  ++ NGDETE S  ED+I SP++TDEDAVTAV
Sbjct: 361 LKTFLAQNGDAREELITKLRDKLLDMDMDKRGNGDETEESAREDII-SPDSTDEDAVTAV 420

Query: 421 EV 423
           EV
Sbjct: 421 EV 421

[Close]

BLAST of Sed0016179 vs. NCBI nr
Match: XP_022154751.1 (DNA repair protein recA homolog 3, mitochondrial-like isoform X3 [Momordica charantia])

HSP 1 Score: 709.5 bits (1830), Expect = 1.7e-200
Identity = 374/423 (88.42%), Postives = 396/423 (93.62%), Query Frame = 0


Query: 1   MARLFRNASFFGRSLFQHE-GLRRVILGTSTQVCSFSTKGKRKSKSSDGSDSCGENLSKK 60
           MARL R+ASFF RSLF HE G RR ILGTSTQ+CSFSTKG+RKSKSSDGSDSC ENLSKK
Sbjct: 1   MARLIRSASFFRRSLFHHEQGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKK 60

Query: 61  ELALQQALDQITATFGKGSIMWLGRSAPSTHVPVVSTGSFVLDAALGIGGIPKGRVTEIY 120
           ELALQQALDQIT+TFGKGSIMWLGRS  S HVPVVSTGSF LD ALG+GG+PKGRV EIY
Sbjct: 61  ELALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPKGRVIEIY 120

Query: 121 GPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQA 180
           GPEASGKTTLALHVIAESQKQGG CVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQA
Sbjct: 121 GPEASGKTTLALHVIAESQKQGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQA 180

Query: 181 LSLVDTLIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLS 240
           LSLVDTLIRSGSVDVVVVDSVAALVPKGEL+GEMGDAHMAMQARLMSQALRKLSHSLSLS
Sbjct: 181 LSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLS 240

Query: 241 QTILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIRRIGLVKKGEETVGSQV 300
           QTILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNI+RIGLVKKGEET+GSQV
Sbjct: 241 QTILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETLGSQV 300

Query: 301 QVKVVKNKLAPPFRTAQFELEFGKGISKESEIINLGLEYKFMSKAGAMYSLNGQSFRGKD 360
           QVKVVKNKLAPPFRTAQFELEFGKGI KESEIINLGL+YKFMSKAGA YS NG+SF GKD
Sbjct: 301 QVKVVKNKLAPPFRTAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNGRSFHGKD 360

Query: 361 ALKTFLSENEDIREELVTKIRDKLLDVERGQQQNGDETEGSLGEDVITSPEATDEDAVTA 420
           ALKTFL++N D REEL+TK+RDKLLD++  ++ NGDETE S  ED+I SP++TDEDAVTA
Sbjct: 361 ALKTFLAQNGDAREELITKLRDKLLDMDMDKRGNGDETEESAREDII-SPDSTDEDAVTA 420

Query: 421 VEV 423
           VEV
Sbjct: 421 VEV 422

[Close]

BLAST of Sed0016179 vs. NCBI nr
Match: XP_022154750.1 (DNA repair protein recA homolog 3, mitochondrial-like isoform X2 [Momordica charantia])

HSP 1 Score: 698.0 bits (1800), Expect = 5.1e-197
Identity = 374/453 (82.56%), Postives = 396/453 (87.42%), Query Frame = 0


Query: 1   MARLFRNASFFGRSLFQHEGLRRVILGTSTQVCSFSTKGKRKSKSSDGSDSCGENLSKKE 60
           MARL R+ASFF RSLF HEG RR ILGTSTQ+CSFSTKG+RKSKSSDGSDSC ENLSKKE
Sbjct: 1   MARLIRSASFFRRSLFHHEGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKKE 60

Query: 61  LALQQALDQITATFGKGSIMWLGRSAPSTHVPVVSTGSFVLDAALGIGGIPKGRVTEIYG 120
           LALQQALDQIT+TFGKGSIMWLGRS  S HVPVVSTGSF LD ALG+GG+PKGRV EIYG
Sbjct: 61  LALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPKGRVIEIYG 120

Query: 121 PEASGKTTLALHVIAESQKQGGCCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL 180
           PEASGKTTLALHVIAESQKQGG CVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL
Sbjct: 121 PEASGKTTLALHVIAESQKQGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL 180

Query: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240
           SLVDTLIRSGSVDVVVVDSVAALVPKGEL+GEMGDAHMAMQARLMSQALRKLSHSLSLSQ
Sbjct: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240

Query: 241 TILIFIN-------------------------------QVRSKLSTFGGFGGPTEVTCGG 300
           TILIFIN                               QVRSKLSTFGGFGGPTEVTCGG
Sbjct: 241 TILIFINQVLFCVRLSRSILQFLMQSSSGTALGNCMSLQVRSKLSTFGGFGGPTEVTCGG 300

Query: 301 NALKFYASMRLNIRRIGLVKKGEETVGSQVQVKVVKNKLAPPFRTAQFELEFGKGISKES 360
           NALKFYASMRLNI+RIGLVKKGEET+GSQVQVKVVKNKLAPPFRTAQFELEFGKGI KES
Sbjct: 301 NALKFYASMRLNIKRIGLVKKGEETLGSQVQVKVVKNKLAPPFRTAQFELEFGKGICKES 360

Query: 361 EIINLGLEYKFMSKAGAMYSLNGQSFRGKDALKTFLSENEDIREELVTKIRDKLLDVERG 420
           EIINLGL+YKFMSKAGA YS NG+SF GKDALKTFL++N D REEL+TK+RDKLLD++  
Sbjct: 361 EIINLGLKYKFMSKAGAFYSFNGRSFHGKDALKTFLAQNGDAREELITKLRDKLLDMDMD 420

Query: 421 QQQNGDETEGSLGEDVITSPEATDEDAVTAVEV 423
           ++ NGDETE S  ED+I SP++TDEDAVTAVEV
Sbjct: 421 KRGNGDETEESAREDII-SPDSTDEDAVTAVEV 452

[Close]

BLAST of Sed0016179 vs. NCBI nr
Match: XP_022154749.1 (DNA repair protein recA homolog 3, mitochondrial-like isoform X1 [Momordica charantia])

HSP 1 Score: 693.3 bits (1788), Expect = 1.3e-195
Identity = 374/454 (82.38%), Postives = 396/454 (87.22%), Query Frame = 0


Query: 1   MARLFRNASFFGRSLFQHE-GLRRVILGTSTQVCSFSTKGKRKSKSSDGSDSCGENLSKK 60
           MARL R+ASFF RSLF HE G RR ILGTSTQ+CSFSTKG+RKSKSSDGSDSC ENLSKK
Sbjct: 1   MARLIRSASFFRRSLFHHEQGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKK 60

Query: 61  ELALQQALDQITATFGKGSIMWLGRSAPSTHVPVVSTGSFVLDAALGIGGIPKGRVTEIY 120
           ELALQQALDQIT+TFGKGSIMWLGRS  S HVPVVSTGSF LD ALG+GG+PKGRV EIY
Sbjct: 61  ELALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPKGRVIEIY 120

Query: 121 GPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQA 180
           GPEASGKTTLALHVIAESQKQGG CVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQA
Sbjct: 121 GPEASGKTTLALHVIAESQKQGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQA 180

Query: 181 LSLVDTLIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLS 240
           LSLVDTLIRSGSVDVVVVDSVAALVPKGEL+GEMGDAHMAMQARLMSQALRKLSHSLSLS
Sbjct: 181 LSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLS 240

Query: 241 QTILIFIN-------------------------------QVRSKLSTFGGFGGPTEVTCG 300
           QTILIFIN                               QVRSKLSTFGGFGGPTEVTCG
Sbjct: 241 QTILIFINQVLFCVRLSRSILQFLMQSSSGTALGNCMSLQVRSKLSTFGGFGGPTEVTCG 300

Query: 301 GNALKFYASMRLNIRRIGLVKKGEETVGSQVQVKVVKNKLAPPFRTAQFELEFGKGISKE 360
           GNALKFYASMRLNI+RIGLVKKGEET+GSQVQVKVVKNKLAPPFRTAQFELEFGKGI KE
Sbjct: 301 GNALKFYASMRLNIKRIGLVKKGEETLGSQVQVKVVKNKLAPPFRTAQFELEFGKGICKE 360

Query: 361 SEIINLGLEYKFMSKAGAMYSLNGQSFRGKDALKTFLSENEDIREELVTKIRDKLLDVER 420
           SEIINLGL+YKFMSKAGA YS NG+SF GKDALKTFL++N D REEL+TK+RDKLLD++ 
Sbjct: 361 SEIINLGLKYKFMSKAGAFYSFNGRSFHGKDALKTFLAQNGDAREELITKLRDKLLDMDM 420

Query: 421 GQQQNGDETEGSLGEDVITSPEATDEDAVTAVEV 423
            ++ NGDETE S  ED+I SP++TDEDAVTAVEV
Sbjct: 421 DKRGNGDETEESAREDII-SPDSTDEDAVTAVEV 453

[Close]

BLAST of Sed0016179 vs. ExPASy Swiss-Prot
Match: Q9ZUP2 (DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g19490 PE=2 SV=2)

HSP 1 Score: 582.4 bits (1500), Expect = 4.1e-165
Identity = 306/420 (72.86%), Postives = 356/420 (84.76%), Query Frame = 0


Query: 1   MARLFRNASFFGRSLFQHEGLRRVILGTSTQVCSFSTKGKRKSKSSDGSDSCGENLSKKE 60
           MAR+ RN      SLF  E LRR ++GTS Q+  F+ K K+KSK SDG+ S  E +SKKE
Sbjct: 1   MARILRNVYSLRSSLFSSELLRRSVVGTSFQLRGFAAKAKKKSK-SDGNGSSEEGMSKKE 60

Query: 61  LALQQALDQITATFGKGSIMWLGRSAPSTHVPVVSTGSFVLDAALGIGGIPKGRVTEIYG 120
           +ALQQALDQIT++FGKGSIM+LGR+    +VPV STGSF LD ALG+GG+PKGRV EIYG
Sbjct: 61  IALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGRVVEIYG 120

Query: 121 PEASGKTTLALHVIAESQKQGGCCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL 180
           PEASGKTTLALHVIAE+QKQGG CVFVDAEHALD +LA+AIGVNTENLLLSQPDCGEQAL
Sbjct: 121 PEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGEQAL 180

Query: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240
           SLVDTLIRSGSVDV+VVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQ
Sbjct: 181 SLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240

Query: 241 TILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIRRIGLVKKGEETVGSQVQ 300
           T+LIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNI+RIGL+KKGEET GSQV 
Sbjct: 241 TLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGEETTGSQVS 300

Query: 301 VKVVKNKLAPPFRTAQFELEFGKGISKESEIINLGLEYKFMSKAGAMYSLNGQSFRGKDA 360
           VK+VKNKLAPPFRTAQFELEFGKGI K +EII+L +++KF++K G  Y+LNG+++ GK+A
Sbjct: 301 VKIVKNKLAPPFRTAQFELEFGKGICKITEIIDLSIKHKFIAKNGTFYNLNGKNYHGKEA 360

Query: 361 LKTFLSENEDIREELVTKIRDKLLDVERGQQQNGDETEGSLGEDVITSPEATDEDAVTAV 420
           LK FL +NE  +EEL+ K++DKL+  E   ++   E+E      V+ SP+ TD+++   V
Sbjct: 361 LKRFLKQNESDQEELMKKLQDKLIADEAADKETESESEEEDSLRVVVSPDNTDDESPALV 419

[Close]

BLAST of Sed0016179 vs. ExPASy Swiss-Prot
Match: Q31F89 (Protein RecA OS=Hydrogenovibrio crunogenus (strain DSM 25203 / XCL-2) OX=317025 GN=recA PE=3 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.5e-103
Identity = 191/327 (58.41%), Postives = 252/327 (77.06%), Query Frame = 0


Query: 59  KELALQQALDQITATFGKGSIMWLGRSAPSTHVPVVSTGSFVLDAALGIGGIPKGRVTEI 118
           K+ AL+ AL QI   FGKGSIM +G       +  VSTGS  LD ALGIGG+P+GRV EI
Sbjct: 5   KKKALEAALGQIEKQFGKGSIMRMGDKGAIRDIDSVSTGSLGLDVALGIGGLPRGRVVEI 64

Query: 119 YGPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQ 178
           YGPE+SGKTTL LH IAE QK GG   FVDAEHALDP  A+ +GV+ +NLL+SQPD GEQ
Sbjct: 65  YGPESSGKTTLTLHAIAEMQKMGGTAAFVDAEHALDPIYAEKLGVDIDNLLVSQPDTGEQ 124

Query: 179 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSL 238
           AL + D+L+RSG+VD+V+VDSVAAL PK E+EG+MGD+HM +QARLMSQALRKL+ ++  
Sbjct: 125 ALEITDSLVRSGAVDIVIVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184

Query: 239 SQTILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIRRIGLVKKGEETVGSQ 298
           + T++IFINQ+R K+     FG P E T GGNALKFY+S+RL+IRRIG +KKG+E +G++
Sbjct: 185 TNTLVIFINQIRMKIGVM--FGNP-ETTTGGNALKFYSSVRLDIRRIGAIKKGDEILGNE 244

Query: 299 VQVKVVKNKLAPPFRTAQFELEFGKGISKESEIINLGLEYKFMSKAGAMYSLNGQSF-RG 358
            +VKVVKNK++PPF+  +FE+ +G+GIS+E E+I+LG++ K + KAGA YS  GQ   +G
Sbjct: 245 TRVKVVKNKVSPPFKQVEFEILYGQGISREGEVIDLGVKEKLIEKAGAWYSYQGQKIGQG 304

Query: 359 KDALKTFLSENEDIREELVTKIRDKLL 385
           KD ++ FL +N DI E L  +I+++L+
Sbjct: 305 KDNVRQFLKDNPDIYETLQVQIKERLM 328

[Close]

BLAST of Sed0016179 vs. ExPASy Swiss-Prot
Match: O32377 (Protein RecA OS=Allochromatium vinosum OX=1049 GN=recA PE=3 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 4.5e-103
Identity = 195/327 (59.63%), Postives = 248/327 (75.84%), Query Frame = 0


Query: 59  KELALQQALDQITATFGKGSIMWLGRSAPSTHVPVVSTGSFVLDAALGIGGIPKGRVTEI 118
           ++ AL  AL QI   FGKGS+M +G      ++  +STGS  LD ALGIGG+PKGRV EI
Sbjct: 5   RKKALAAALTQIEKQFGKGSVMRMGDVGAVRNIEAISTGSLGLDLALGIGGVPKGRVIEI 64

Query: 119 YGPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQ 178
           YGPE+SGKTTL LH+IAESQK GG   FVDAEHALDP  A+ +GVN  +LL+SQPD GEQ
Sbjct: 65  YGPESSGKTTLTLHIIAESQKLGGTAAFVDAEHALDPVYAEKLGVNMTDLLVSQPDTGEQ 124

Query: 179 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSL 238
           AL + D L+RSG+VDVVVVDSVAAL PK E+EGEMGD+H+ +QARLMSQALRKL+ ++  
Sbjct: 125 ALEITDMLVRSGAVDVVVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKR 184

Query: 239 SQTILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIRRIGLVKKGEETVGSQ 298
           S   +IFINQ+R K+     FG P E T GGNALKFYAS+RL+IRR G +KKG+E +G++
Sbjct: 185 SNCCVIFINQIRMKIGVM--FGSP-ETTTGGNALKFYASVRLDIRRTGAIKKGDEVIGNE 244

Query: 299 VQVKVVKNKLAPPFRTAQFELEFGKGISKESEIINLGLEYKFMSKAGAMYSLNGQSF-RG 358
            +VKVVKNK+APPFR A+F++ +G+GIS+E EII+LG+   F+ K+GA YS +G    +G
Sbjct: 245 TKVKVVKNKVAPPFRQAEFDILYGQGISREGEIIDLGVAEGFIDKSGAWYSYDGNRIGQG 304

Query: 359 KDALKTFLSENEDIREELVTKIRDKLL 385
           KD ++ FL EN  I + +  +IRDKLL
Sbjct: 305 KDNVRNFLCENPGIAQAIEARIRDKLL 328

[Close]

BLAST of Sed0016179 vs. ExPASy Swiss-Prot
Match: B8GQV3 (Protein RecA OS=Thioalkalivibrio sulfidiphilus (strain HL-EbGR7) OX=396588 GN=recA PE=3 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 2.2e-102
Identity = 194/341 (56.89%), Postives = 253/341 (74.19%), Query Frame = 0


Query: 59  KELALQQALDQITATFGKGSIMWLGRSAPSTHVPVVSTGSFVLDAALGIGGIPKGRVTEI 118
           ++ AL  AL QI   FGKG++M +G S     V  +STGS  LD ALGIGG+PKGRV EI
Sbjct: 5   RKKALSAALGQIERQFGKGAVMRMGDSTAVRDVEAISTGSLALDIALGIGGLPKGRVVEI 64

Query: 119 YGPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQ 178
           YGPE+SGKTTL L VIAE QKQGG   FVDAEHALDP  A+ +GVN ++LL+SQPD GEQ
Sbjct: 65  YGPESSGKTTLTLQVIAECQKQGGTAAFVDAEHALDPGYAEKLGVNVDDLLVSQPDTGEQ 124

Query: 179 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSL 238
           AL + D L+RSG+VDVVVVDSVAAL PK E+EGEMGDAH+ +QARLMSQALRKL+ ++  
Sbjct: 125 ALEIADMLVRSGAVDVVVVDSVAALTPKAEIEGEMGDAHVGLQARLMSQALRKLTANIKR 184

Query: 239 SQTILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIRRIGLVKKGEETVGSQ 298
           S T++IFINQ+R K+     FG P E T GGNALKFYAS+RL+IRR G +KKG+E +G++
Sbjct: 185 SNTLVIFINQIRMKIGVM--FGNP-ETTTGGNALKFYASVRLDIRRTGAIKKGDEVIGNE 244

Query: 299 VQVKVVKNKLAPPFRTAQFELEFGKGISKESEIINLGLEYKFMSKAGAMYSLNGQSF-RG 358
            +VKVVKNK+APPF+ A+FE+ +G+GIS+  E+I++G++   + K+GA YS NG+   +G
Sbjct: 245 TRVKVVKNKVAPPFKQAEFEILYGEGISRLGEVIDIGVQDGIVDKSGAWYSYNGERIGQG 304

Query: 359 KDALKTFLSENEDIREELVTKIRDKLLDVERGQQQNGDETE 399
           KD  +TFL E+ ++  E+  +IR+K L     +    +  E
Sbjct: 305 KDNARTFLKEHPEMAGEIERQIREKHLPKRSAKADEAESAE 342

[Close]

BLAST of Sed0016179 vs. ExPASy Swiss-Prot
Match: Q1H3U7 (Protein RecA OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) OX=265072 GN=recA PE=3 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 3.8e-102
Identity = 197/329 (59.88%), Postives = 246/329 (74.77%), Query Frame = 0


Query: 54  ENLSKKELALQQALDQITATFGKGSIMWLGRSAPSTHVPVVSTGSFVLDAALGIGGIPKG 113
           EN SK   AL  AL QI   FGKGSIM +G +  +  +  VSTGS  LD ALGIGG+P+G
Sbjct: 3   ENRSK---ALAAALSQIEKQFGKGSIMRMGDTDVAADIQAVSTGSLGLDIALGIGGLPRG 62

Query: 114 RVTEIYGPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDPALAQAIGVNTENLLLSQP 173
           R+ EIYGPE+SGKTTL L VIA+ QK GG   F+DAEHALDP  AQ +GVN  +LL+SQP
Sbjct: 63  RIVEIYGPESSGKTTLTLSVIAQMQKLGGTAAFIDAEHALDPVYAQKLGVNVSDLLISQP 122

Query: 174 DCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLS 233
           D GEQAL + D L+RSGSVDVVVVDSVAAL PK E+EGEMGD+HM +QARLMSQALRKL+
Sbjct: 123 DTGEQALEIADMLVRSGSVDVVVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLT 182

Query: 234 HSLSLSQTILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIRRIGLVKKGEE 293
            ++  + T++IFINQ+R K+     FG P E T GGNALKFYAS+RL+IRR G +KKG+E
Sbjct: 183 ANIKRTNTLVIFINQIRMKIGVM--FGNP-ETTTGGNALKFYASVRLDIRRTGAIKKGDE 242

Query: 294 TVGSQVQVKVVKNKLAPPFRTAQFELEFGKGISKESEIINLGLEYKFMSKAGAMYSLNGQ 353
             GS+ +VKVVKNK+APPF+ A+F++ +G+GIS+E EII LG+  K + KAGA YS  G+
Sbjct: 243 VTGSETRVKVVKNKVAPPFKQAEFDILYGEGISREGEIIELGVNLKLIEKAGAWYSYKGE 302

Query: 354 SF-RGKDALKTFLSENEDIREELVTKIRD 382
              +GKD  + FL E+ +I  E+  KIR+
Sbjct: 303 KIGQGKDNAREFLREHPEIANEIDAKIRE 325

[Close]

BLAST of Sed0016179 vs. ExPASy TrEMBL
Match: A0A6J1DMJ4 (DNA repair protein recA homolog 3, mitochondrial-like isoform X4 OS=Momordica charantia OX=3673 GN=LOC111021929 PE=3 SV=1)

HSP 1 Score: 714.1 bits (1842), Expect = 3.3e-202
Identity = 374/422 (88.63%), Postives = 396/422 (93.84%), Query Frame = 0


Query: 1   MARLFRNASFFGRSLFQHEGLRRVILGTSTQVCSFSTKGKRKSKSSDGSDSCGENLSKKE 60
           MARL R+ASFF RSLF HEG RR ILGTSTQ+CSFSTKG+RKSKSSDGSDSC ENLSKKE
Sbjct: 1   MARLIRSASFFRRSLFHHEGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKKE 60

Query: 61  LALQQALDQITATFGKGSIMWLGRSAPSTHVPVVSTGSFVLDAALGIGGIPKGRVTEIYG 120
           LALQQALDQIT+TFGKGSIMWLGRS  S HVPVVSTGSF LD ALG+GG+PKGRV EIYG
Sbjct: 61  LALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPKGRVIEIYG 120

Query: 121 PEASGKTTLALHVIAESQKQGGCCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL 180
           PEASGKTTLALHVIAESQKQGG CVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL
Sbjct: 121 PEASGKTTLALHVIAESQKQGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL 180

Query: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240
           SLVDTLIRSGSVDVVVVDSVAALVPKGEL+GEMGDAHMAMQARLMSQALRKLSHSLSLSQ
Sbjct: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240

Query: 241 TILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIRRIGLVKKGEETVGSQVQ 300
           TILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNI+RIGLVKKGEET+GSQVQ
Sbjct: 241 TILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETLGSQVQ 300

Query: 301 VKVVKNKLAPPFRTAQFELEFGKGISKESEIINLGLEYKFMSKAGAMYSLNGQSFRGKDA 360
           VKVVKNKLAPPFRTAQFELEFGKGI KESEIINLGL+YKFMSKAGA YS NG+SF GKDA
Sbjct: 301 VKVVKNKLAPPFRTAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNGRSFHGKDA 360

Query: 361 LKTFLSENEDIREELVTKIRDKLLDVERGQQQNGDETEGSLGEDVITSPEATDEDAVTAV 420
           LKTFL++N D REEL+TK+RDKLLD++  ++ NGDETE S  ED+I SP++TDEDAVTAV
Sbjct: 361 LKTFLAQNGDAREELITKLRDKLLDMDMDKRGNGDETEESAREDII-SPDSTDEDAVTAV 420

Query: 421 EV 423
           EV
Sbjct: 421 EV 421

[Close]

BLAST of Sed0016179 vs. ExPASy TrEMBL
Match: A0A6J1DPM9 (DNA repair protein recA homolog 3, mitochondrial-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111021929 PE=3 SV=1)

HSP 1 Score: 709.5 bits (1830), Expect = 8.2e-201
Identity = 374/423 (88.42%), Postives = 396/423 (93.62%), Query Frame = 0


Query: 1   MARLFRNASFFGRSLFQHE-GLRRVILGTSTQVCSFSTKGKRKSKSSDGSDSCGENLSKK 60
           MARL R+ASFF RSLF HE G RR ILGTSTQ+CSFSTKG+RKSKSSDGSDSC ENLSKK
Sbjct: 1   MARLIRSASFFRRSLFHHEQGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKK 60

Query: 61  ELALQQALDQITATFGKGSIMWLGRSAPSTHVPVVSTGSFVLDAALGIGGIPKGRVTEIY 120
           ELALQQALDQIT+TFGKGSIMWLGRS  S HVPVVSTGSF LD ALG+GG+PKGRV EIY
Sbjct: 61  ELALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPKGRVIEIY 120

Query: 121 GPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQA 180
           GPEASGKTTLALHVIAESQKQGG CVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQA
Sbjct: 121 GPEASGKTTLALHVIAESQKQGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQA 180

Query: 181 LSLVDTLIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLS 240
           LSLVDTLIRSGSVDVVVVDSVAALVPKGEL+GEMGDAHMAMQARLMSQALRKLSHSLSLS
Sbjct: 181 LSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLS 240

Query: 241 QTILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIRRIGLVKKGEETVGSQV 300
           QTILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNI+RIGLVKKGEET+GSQV
Sbjct: 241 QTILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETLGSQV 300

Query: 301 QVKVVKNKLAPPFRTAQFELEFGKGISKESEIINLGLEYKFMSKAGAMYSLNGQSFRGKD 360
           QVKVVKNKLAPPFRTAQFELEFGKGI KESEIINLGL+YKFMSKAGA YS NG+SF GKD
Sbjct: 301 QVKVVKNKLAPPFRTAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNGRSFHGKD 360

Query: 361 ALKTFLSENEDIREELVTKIRDKLLDVERGQQQNGDETEGSLGEDVITSPEATDEDAVTA 420
           ALKTFL++N D REEL+TK+RDKLLD++  ++ NGDETE S  ED+I SP++TDEDAVTA
Sbjct: 361 ALKTFLAQNGDAREELITKLRDKLLDMDMDKRGNGDETEESAREDII-SPDSTDEDAVTA 420

Query: 421 VEV 423
           VEV
Sbjct: 421 VEV 422

[Close]

BLAST of Sed0016179 vs. ExPASy TrEMBL
Match: A0A6J1DKI3 (DNA repair protein recA homolog 3, mitochondrial-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021929 PE=3 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 2.5e-197
Identity = 374/453 (82.56%), Postives = 396/453 (87.42%), Query Frame = 0


Query: 1   MARLFRNASFFGRSLFQHEGLRRVILGTSTQVCSFSTKGKRKSKSSDGSDSCGENLSKKE 60
           MARL R+ASFF RSLF HEG RR ILGTSTQ+CSFSTKG+RKSKSSDGSDSC ENLSKKE
Sbjct: 1   MARLIRSASFFRRSLFHHEGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKKE 60

Query: 61  LALQQALDQITATFGKGSIMWLGRSAPSTHVPVVSTGSFVLDAALGIGGIPKGRVTEIYG 120
           LALQQALDQIT+TFGKGSIMWLGRS  S HVPVVSTGSF LD ALG+GG+PKGRV EIYG
Sbjct: 61  LALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPKGRVIEIYG 120

Query: 121 PEASGKTTLALHVIAESQKQGGCCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL 180
           PEASGKTTLALHVIAESQKQGG CVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL
Sbjct: 121 PEASGKTTLALHVIAESQKQGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL 180

Query: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240
           SLVDTLIRSGSVDVVVVDSVAALVPKGEL+GEMGDAHMAMQARLMSQALRKLSHSLSLSQ
Sbjct: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240

Query: 241 TILIFIN-------------------------------QVRSKLSTFGGFGGPTEVTCGG 300
           TILIFIN                               QVRSKLSTFGGFGGPTEVTCGG
Sbjct: 241 TILIFINQVLFCVRLSRSILQFLMQSSSGTALGNCMSLQVRSKLSTFGGFGGPTEVTCGG 300

Query: 301 NALKFYASMRLNIRRIGLVKKGEETVGSQVQVKVVKNKLAPPFRTAQFELEFGKGISKES 360
           NALKFYASMRLNI+RIGLVKKGEET+GSQVQVKVVKNKLAPPFRTAQFELEFGKGI KES
Sbjct: 301 NALKFYASMRLNIKRIGLVKKGEETLGSQVQVKVVKNKLAPPFRTAQFELEFGKGICKES 360

Query: 361 EIINLGLEYKFMSKAGAMYSLNGQSFRGKDALKTFLSENEDIREELVTKIRDKLLDVERG 420
           EIINLGL+YKFMSKAGA YS NG+SF GKDALKTFL++N D REEL+TK+RDKLLD++  
Sbjct: 361 EIINLGLKYKFMSKAGAFYSFNGRSFHGKDALKTFLAQNGDAREELITKLRDKLLDMDMD 420

Query: 421 QQQNGDETEGSLGEDVITSPEATDEDAVTAVEV 423
           ++ NGDETE S  ED+I SP++TDEDAVTAVEV
Sbjct: 421 KRGNGDETEESAREDII-SPDSTDEDAVTAVEV 452

[Close]

BLAST of Sed0016179 vs. ExPASy TrEMBL
Match: A0A6J1KB04 (DNA repair protein recA homolog 3, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111493837 PE=3 SV=1)

HSP 1 Score: 693.3 bits (1788), Expect = 6.1e-196
Identity = 365/423 (86.29%), Postives = 389/423 (91.96%), Query Frame = 0


Query: 1   MARLFRNASFFGRSLFQHEGLRRVILGTSTQVCSFSTKGKRKSKSSDGSDSCGENLSKKE 60
           MARL RNASF GR LFQHE  RR ILGTSTQ+CSFSTKGKRKSKSSDGSDSC ENLSKKE
Sbjct: 1   MARLIRNASFVGRCLFQHERYRRGILGTSTQLCSFSTKGKRKSKSSDGSDSCEENLSKKE 60

Query: 61  LALQQALDQITATFGKGSIMWLGRSAPSTHVPVVSTGSFVLDAALGIGGIPKGRVTEIYG 120
           LALQQALDQIT+TFGKGSIMWLGRS  S HVPVV TGSF LD ALGIGG+PKGRV EIYG
Sbjct: 61  LALQQALDQITSTFGKGSIMWLGRSVSSRHVPVVPTGSFELDMALGIGGLPKGRVIEIYG 120

Query: 121 PEASGKTTLALHVIAESQKQGGCCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL 180
           PEASGKTTLALHVIAESQKQGG CVFVDAEHALDP+LAQAIGVNTENLLLSQPDCGEQAL
Sbjct: 121 PEASGKTTLALHVIAESQKQGGYCVFVDAEHALDPSLAQAIGVNTENLLLSQPDCGEQAL 180

Query: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240
           SLVDTLIRSGSVDVVVVDSVAALVPKGEL+GEMGDAHMAMQARLMSQALRKL HSLSLSQ
Sbjct: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLCHSLSLSQ 240

Query: 241 TILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIRRIGLVKKGEETVGSQVQ 300
           T+LIFINQVRSKLSTF GFGGPTEVTCGGNALKFYAS+RLNIRR+   K GEE VGSQVQ
Sbjct: 241 TVLIFINQVRSKLSTF-GFGGPTEVTCGGNALKFYASVRLNIRRVAFAKNGEEIVGSQVQ 300

Query: 301 VKVVKNKLAPPFRTAQFELEFGKGISKESEIINLGLEYKFMSKAGAMYSLNGQSFRGKDA 360
           VKVVKNKLAPPFRTAQF+LEFGKGI KESEIINLGL+YKFMS+AG  YS NG++FRGK+A
Sbjct: 301 VKVVKNKLAPPFRTAQFDLEFGKGICKESEIINLGLKYKFMSRAGGFYSCNGRNFRGKEA 360

Query: 361 LKTFLSENEDIREELVTKIRDKLLDVERGQQQNGDET-EGSLGEDVITSPEATDEDAVTA 420
           LKTFLSENED+RE+L TK+RDK+ D +RG+  N DET EGS+ ED+ITSP++TDEDAVTA
Sbjct: 361 LKTFLSENEDVREDLFTKLRDKIHDEQRGKSPNRDETDEGSVQEDIITSPDSTDEDAVTA 420

Query: 421 VEV 423
           VEV
Sbjct: 421 VEV 422

[Close]

BLAST of Sed0016179 vs. ExPASy TrEMBL
Match: A0A6J1DN29 (DNA repair protein recA homolog 3, mitochondrial-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021929 PE=3 SV=1)

HSP 1 Score: 693.3 bits (1788), Expect = 6.1e-196
Identity = 374/454 (82.38%), Postives = 396/454 (87.22%), Query Frame = 0


Query: 1   MARLFRNASFFGRSLFQHE-GLRRVILGTSTQVCSFSTKGKRKSKSSDGSDSCGENLSKK 60
           MARL R+ASFF RSLF HE G RR ILGTSTQ+CSFSTKG+RKSKSSDGSDSC ENLSKK
Sbjct: 1   MARLIRSASFFRRSLFHHEQGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKK 60

Query: 61  ELALQQALDQITATFGKGSIMWLGRSAPSTHVPVVSTGSFVLDAALGIGGIPKGRVTEIY 120
           ELALQQALDQIT+TFGKGSIMWLGRS  S HVPVVSTGSF LD ALG+GG+PKGRV EIY
Sbjct: 61  ELALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPKGRVIEIY 120

Query: 121 GPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQA 180
           GPEASGKTTLALHVIAESQKQGG CVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQA
Sbjct: 121 GPEASGKTTLALHVIAESQKQGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQA 180

Query: 181 LSLVDTLIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLS 240
           LSLVDTLIRSGSVDVVVVDSVAALVPKGEL+GEMGDAHMAMQARLMSQALRKLSHSLSLS
Sbjct: 181 LSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLS 240

Query: 241 QTILIFIN-------------------------------QVRSKLSTFGGFGGPTEVTCG 300
           QTILIFIN                               QVRSKLSTFGGFGGPTEVTCG
Sbjct: 241 QTILIFINQVLFCVRLSRSILQFLMQSSSGTALGNCMSLQVRSKLSTFGGFGGPTEVTCG 300

Query: 301 GNALKFYASMRLNIRRIGLVKKGEETVGSQVQVKVVKNKLAPPFRTAQFELEFGKGISKE 360
           GNALKFYASMRLNI+RIGLVKKGEET+GSQVQVKVVKNKLAPPFRTAQFELEFGKGI KE
Sbjct: 301 GNALKFYASMRLNIKRIGLVKKGEETLGSQVQVKVVKNKLAPPFRTAQFELEFGKGICKE 360

Query: 361 SEIINLGLEYKFMSKAGAMYSLNGQSFRGKDALKTFLSENEDIREELVTKIRDKLLDVER 420
           SEIINLGL+YKFMSKAGA YS NG+SF GKDALKTFL++N D REEL+TK+RDKLLD++ 
Sbjct: 361 SEIINLGLKYKFMSKAGAFYSFNGRSFHGKDALKTFLAQNGDAREELITKLRDKLLDMDM 420

Query: 421 GQQQNGDETEGSLGEDVITSPEATDEDAVTAVEV 423
            ++ NGDETE S  ED+I SP++TDEDAVTAVEV
Sbjct: 421 DKRGNGDETEESAREDII-SPDSTDEDAVTAVEV 453

[Close]

BLAST of Sed0016179 vs. TAIR 10
Match: AT2G19490.1 (recA DNA recombination family protein )

HSP 1 Score: 582.4 bits (1500), Expect = 2.9e-166
Identity = 306/420 (72.86%), Postives = 356/420 (84.76%), Query Frame = 0


Query: 1   MARLFRNASFFGRSLFQHEGLRRVILGTSTQVCSFSTKGKRKSKSSDGSDSCGENLSKKE 60
           MAR+ RN      SLF  E LRR ++GTS Q+  F+ K K+KSK SDG+ S  E +SKKE
Sbjct: 1   MARILRNVYSLRSSLFSSELLRRSVVGTSFQLRGFAAKAKKKSK-SDGNGSSEEGMSKKE 60

Query: 61  LALQQALDQITATFGKGSIMWLGRSAPSTHVPVVSTGSFVLDAALGIGGIPKGRVTEIYG 120
           +ALQQALDQIT++FGKGSIM+LGR+    +VPV STGSF LD ALG+GG+PKGRV EIYG
Sbjct: 61  IALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGRVVEIYG 120

Query: 121 PEASGKTTLALHVIAESQKQGGCCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL 180
           PEASGKTTLALHVIAE+QKQGG CVFVDAEHALD +LA+AIGVNTENLLLSQPDCGEQAL
Sbjct: 121 PEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGEQAL 180

Query: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240
           SLVDTLIRSGSVDV+VVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQ
Sbjct: 181 SLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240

Query: 241 TILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIRRIGLVKKGEETVGSQVQ 300
           T+LIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNI+RIGL+KKGEET GSQV 
Sbjct: 241 TLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGEETTGSQVS 300

Query: 301 VKVVKNKLAPPFRTAQFELEFGKGISKESEIINLGLEYKFMSKAGAMYSLNGQSFRGKDA 360
           VK+VKNKLAPPFRTAQFELEFGKGI K +EII+L +++KF++K G  Y+LNG+++ GK+A
Sbjct: 301 VKIVKNKLAPPFRTAQFELEFGKGICKITEIIDLSIKHKFIAKNGTFYNLNGKNYHGKEA 360

Query: 361 LKTFLSENEDIREELVTKIRDKLLDVERGQQQNGDETEGSLGEDVITSPEATDEDAVTAV 420
           LK FL +NE  +EEL+ K++DKL+  E   ++   E+E      V+ SP+ TD+++   V
Sbjct: 361 LKRFLKQNESDQEELMKKLQDKLIADEAADKETESESEEEDSLRVVVSPDNTDDESPALV 419

[Close]

BLAST of Sed0016179 vs. TAIR 10
Match: AT3G10140.1 (RECA homolog 3 )

HSP 1 Score: 305.4 bits (781), Expect = 6.9e-83
Identity = 157/328 (47.87%), Postives = 229/328 (69.82%), Query Frame = 0


Query: 56  LSKKELALQQALDQITATFGKGSIMWLGRSAPSTHVPVVSTGSFVLDAALGIGGIPKGRV 115
           +++K+ AL  AL Q++  F K S + L R      V V+STGS  LD ALG+GG+PKGR+
Sbjct: 59  VAEKDTALHLALSQLSGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRM 118

Query: 116 TEIYGPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDPALAQAIGVNTENLLLSQPDC 175
            E+YG EASGKTTLALH+I E+QK GG C ++DAE+A+DP+LA++IGVNTE LL+S+P  
Sbjct: 119 VEVYGKEASGKTTLALHIIKEAQKLGGYCAYLDAENAMDPSLAESIGVNTEELLISRPSS 178

Query: 176 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHS 235
            E+ L++VD L +SGSVDV+VVDSVAAL P+ EL+  +G+ +   Q+R+M+QALRK+ +S
Sbjct: 179 AEKMLNIVDVLTKSGSVDVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYS 238

Query: 236 LSLSQTILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIRRIGLVKKGEETV 295
           +  SQT+++F+NQVRS + +   F    EVTCGGNAL F+A++RL + R GL+K   +  
Sbjct: 239 VGYSQTLIVFLNQVRSHVKSNMHFPHAEEVTCGGNALPFHAAIRLKMIRTGLIKTANKIS 298

Query: 296 GSQVQVKVVKNKLAPPFRTAQFELEFGKGISKESEIINLGLEYKFMSKAGAMYSLNGQSF 355
           G  V V+VVKNKLAP  + ++  + FG G   E E++ L  E+  + + G  Y + G+  
Sbjct: 299 GLNVCVQVVKNKLAPGKKKSELGIHFGHGFYVEREVLELACEHGVILREGTSYFIEGEVI 358

Query: 356 RGKDALKTFLSENEDIREELVTKIRDKL 384
            GKDA + +L EN++  + +V  +R++L
Sbjct: 359 EGKDAAEKYLVENKEALDTVVAILRNQL 386

[Close]

BLAST of Sed0016179 vs. TAIR 10
Match: AT1G79050.1 (recA DNA recombination family protein )

HSP 1 Score: 288.9 bits (738), Expect = 6.7e-78
Identity = 162/332 (48.80%), Postives = 229/332 (68.98%), Query Frame = 0


Query: 59  KELALQQALDQITATFGKGSIMWLGRSAPSTHVPVVSTGSFVLDAALGIGGIPKGRVTEI 118
           ++ AL+ A++ I ++FGKGS+  LG SA    V   S+G   LD ALG GG+PKGRV EI
Sbjct: 83  RQKALEAAMNDINSSFGKGSVTRLG-SAGGALVETFSSGILTLDLALG-GGLPKGRVVEI 142

Query: 119 YGPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQ 178
           YGPE+SGKTTLALH IAE QK GG  + VDAEHA DPA ++A+GV+ ENL++ QPD GE 
Sbjct: 143 YGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEM 202

Query: 179 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSL 238
           AL   D + RSG+VD++ VDSV+AL P+ E+EGE+G   M +QARLMSQALRK+S + S 
Sbjct: 203 ALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASK 262

Query: 239 SQTILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIRRIGLVK--KGEETVG 298
           +   LIF+NQ+R K+  +  +G P EVT GG ALKF+AS+RL IR  G +K  KG+E +G
Sbjct: 263 AGCTLIFLNQIRYKIGVY--YGNP-EVTSGGIALKFFASVRLEIRSAGKIKSSKGDEDIG 322

Query: 299 SQVQVKVVKNKLAPPFRTAQFELEFGKGISKESEIINLGLEYKFMSKAGAMYSLNGQSF- 358
            + +V+V K+K++ P++ A+FE+ FG+G+SK   +++     + + K G+ YS   Q   
Sbjct: 323 LRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEIMEVVVKKGSWYSYEDQRLG 382

Query: 359 RGKDALKTFLSENEDIREELVTKIRDKLLDVE 388
           +G++     L EN  +++E+  K+R  +LD E
Sbjct: 383 QGREKALQHLRENPALQDEIEKKVRLLMLDGE 409

[Close]

BLAST of Sed0016179 vs. TAIR 10
Match: AT3G32920.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 284.6 bits (727), Expect = 1.3e-76
Identity = 153/214 (71.50%), Postives = 174/214 (81.31%), Query Frame = 0


Query: 80  MWLGRSAPSTHVPVVSTGSFVLDAALGIGGIPKGRVTEIYGPEASGKTTLALHVIAESQK 139
           M+L R+    +VPV STGSF LD ALG+GG+PKGR+ EIYGPEASGKT LALH+++    
Sbjct: 1   MYLSRAVSPRNVPVFSTGSFALDVALGVGGLPKGRLVEIYGPEASGKTALALHMLS---- 60

Query: 140 QGGCCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDS 199
                        L  +LA+AIGVNTENLLLSQPDCG+QALSLVDTLI+SGSVDV+VVDS
Sbjct: 61  -----------MLLIRSLAKAIGVNTENLLLSQPDCGKQALSLVDTLIQSGSVDVIVVDS 120

Query: 200 VAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRSKLSTFGGF 259
           VAALVPKGEL+GEMGDAHMA+QARLMSQALRK SHSL LSQT+LIFINQVR +      F
Sbjct: 121 VAALVPKGELDGEMGDAHMAIQARLMSQALRKFSHSLLLSQTLLIFINQVRER------F 180

Query: 260 GGPTEVTCGGNALKFYASMRLNIRRIGLVKKGEE 294
           GGPTEVT GGNALKFYA MRL+I+RIGL+KKGEE
Sbjct: 181 GGPTEVTSGGNALKFYAPMRLDIKRIGLIKKGEE 193

[Close]

BLAST of Sed0016179 vs. TAIR 10
Match: AT1G79050.2 (recA DNA recombination family protein )

HSP 1 Score: 253.8 bits (647), Expect = 2.4e-67
Identity = 139/257 (54.09%), Postives = 187/257 (72.76%), Query Frame = 0


Query: 59  KELALQQALDQITATFGKGSIMWLGRSAPSTHVPVVSTGSFVLDAALGIGGIPKGRVTEI 118
           ++ AL+ A++ I ++FGKGS+  LG SA    V   S+G   LD ALG GG+PKGRV EI
Sbjct: 83  RQKALEAAMNDINSSFGKGSVTRLG-SAGGALVETFSSGILTLDLALG-GGLPKGRVVEI 142

Query: 119 YGPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQ 178
           YGPE+SGKTTLALH IAE QK GG  + VDAEHA DPA ++A+GV+ ENL++ QPD GE 
Sbjct: 143 YGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEM 202

Query: 179 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSL 238
           AL   D + RSG+VD++ VDSV+AL P+ E+EGE+G   M +QARLMSQALRK+S + S 
Sbjct: 203 ALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASK 262

Query: 239 SQTILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIRRIGLVK--KGEETVG 298
           +   LIF+NQ+R K+  +  +G P EVT GG ALKF+AS+RL IR  G +K  KG+E +G
Sbjct: 263 AGCTLIFLNQIRYKIGVY--YGNP-EVTSGGIALKFFASVRLEIRSAGKIKSSKGDEDIG 322

Query: 299 SQVQVKVVKNKLAPPFR 314
            + +V+V K+K++ P++
Sbjct: 323 LRARVRVQKSKVSRPYK 334

The following BLAST results are available for this feature:

BLAST of Sed0016179 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890910.1	2.5e-204	88.86	DNA repair protein recA homolog 3, mitochondrial [Benincasa hispida]	[more]
XP_022154752.1	6.9e-202	88.63	DNA repair protein recA homolog 3, mitochondrial-like isoform X4 [Momordica char...	[more]
XP_022154751.1	1.7e-200	88.42	DNA repair protein recA homolog 3, mitochondrial-like isoform X3 [Momordica char...	[more]
XP_022154750.1	5.1e-197	82.56	DNA repair protein recA homolog 3, mitochondrial-like isoform X2 [Momordica char...	[more]
XP_022154749.1	1.3e-195	82.38	DNA repair protein recA homolog 3, mitochondrial-like isoform X1 [Momordica char...	[more]

BLAST of Sed0016179 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUP2	4.1e-165	72.86	DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q31F89	1.5e-103	58.41	Protein RecA OS=Hydrogenovibrio crunogenus (strain DSM 25203 / XCL-2) OX=317025 ...	[more]
O32377	4.5e-103	59.63	Protein RecA OS=Allochromatium vinosum OX=1049 GN=recA PE=3 SV=1	[more]
B8GQV3	2.2e-102	56.89	Protein RecA OS=Thioalkalivibrio sulfidiphilus (strain HL-EbGR7) OX=396588 GN=re...	[more]
Q1H3U7	3.8e-102	59.88	Protein RecA OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) ...	[more]

BLAST of Sed0016179 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DMJ4	3.3e-202	88.63	DNA repair protein recA homolog 3, mitochondrial-like isoform X4 OS=Momordica ch...	[more]
A0A6J1DPM9	8.2e-201	88.42	DNA repair protein recA homolog 3, mitochondrial-like isoform X3 OS=Momordica ch...	[more]
A0A6J1DKI3	2.5e-197	82.56	DNA repair protein recA homolog 3, mitochondrial-like isoform X2 OS=Momordica ch...	[more]
A0A6J1KB04	6.1e-196	86.29	DNA repair protein recA homolog 3, mitochondrial OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1DN29	6.1e-196	82.38	DNA repair protein recA homolog 3, mitochondrial-like isoform X1 OS=Momordica ch...	[more]

BLAST of Sed0016179 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19490.1	2.9e-166	72.86	recA DNA recombination family protein	[more]
AT3G10140.1	6.9e-83	47.87	RECA homolog 3	[more]
AT1G79050.1	6.7e-78	48.80	recA DNA recombination family protein	[more]
AT3G32920.1	1.3e-76	71.50	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G79050.2	2.4e-67	54.09	recA DNA recombination family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013765	DNA recombination and repair protein RecA	PRINTS	PR00142	RECA	coord: 301..330 score: 58.99 coord: 182..211 score: 65.76 coord: 220..249 score: 60.78 coord: 354..371 score: 30.53 coord: 148..177 score: 65.89 coord: 268..296 score: 63.79
IPR013765	DNA recombination and repair protein RecA	TIGRFAM	TIGR02012	TIGR02012	coord: 59..381 e-value: 3.5E-138 score: 458.2
IPR013765	DNA recombination and repair protein RecA	PFAM	PF00154	RecA	coord: 62..326 e-value: 3.4E-120 score: 400.4
IPR013765	DNA recombination and repair protein RecA	PANTHER	PTHR45900	RECA	coord: 1..412
IPR013765	DNA recombination and repair protein RecA	HAMAP	MF_00268	RecA	coord: 59..386 score: 43.59864
IPR013765	DNA recombination and repair protein RecA	CDD	cd00983	recA	coord: 58..385 e-value: 1.13091E-166 score: 468.64
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 112..286 e-value: 2.1E-7 score: 40.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 88..387 e-value: 2.1E-110 score: 370.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 62..325
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 387..422
None	No IPR available	PANTHER	PTHR45900:SF9	REPAIR PROTEIN RECA, PUTATIVE-RELATED	coord: 1..412
IPR020584	DNA recombination/repair protein RecA, conserved site	PROSITE	PS00321	RECA_1	coord: 271..279
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 90..249 score: 38.073956
IPR020587	DNA recombination and repair protein RecA, monomer-monomer interface	PROSITE	PS50163	RECA_3	coord: 259..330 score: 27.515688
IPR023400	DNA recombination and repair protein RecA, C-terminal	SUPERFAMILY	54752	RecA protein, C-terminal domain	coord: 326..382

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016179.1	Sed0016179.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003677	DNA binding