Homology
BLAST of Sed0016128 vs. NCBI nr
Match:
KAA0046727.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0056032.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0059561.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0065497.1 retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 342.4 bits (877), Expect = 3.6e-90
Identity = 170/288 (59.03%), Postives = 205/288 (71.18%), Query Frame = 0
Query: 1 MVAMFLHIMAHDVKNRVVRKIFTRSGETVSRHFQFVLTAIIRCHDILFKKPEPIQPSCTD 60
MVAMFLHI+AHDVKNRV+++ F RSGET+SRHF VL A+IR HD L KKP+P+ CTD
Sbjct: 96 MVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHDELLKKPQPVPNECTD 155
Query: 61 SRWKWFE------------LQVPVENRASFRNRKSIITTNVLAVWAPSGEFIYVLAGWEG 120
RW+WFE + VP +RA +R RK + TNVL V G+F+YVLAGWEG
Sbjct: 156 QRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEG 215
Query: 121 SAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNDDGFLAPYRGERYHLSNWRG-RNPPR 180
SAADSR+LRDALSR N +VP GYYYL DAGYPN +GFLAPYRG+RYHL WRG N P
Sbjct: 216 SAADSRILRDALSRPNRLKVPKGYYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPS 275
Query: 181 NPREFFNKAHSSARNIIERAFGALKNRWAILRHKSYYPPKVQVKIITACCRLHNLICREM 240
+EFFN HSSARN+IERAFG LK RWAILR KSYYP +VQ + I ACC LHNLI REM
Sbjct: 276 TSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREM 335
Query: 241 GSTIGLEILGENDATVYQEEMDDTPTINFVETSPLWTAFRDSMAQRMF 276
+ + + E D+T DD I+++ETS W+ +RD++A+ MF
Sbjct: 336 TNFDIEDNIDEVDSTHATTAADD---IHYIETSNEWSQWRDNLAEEMF 380
BLAST of Sed0016128 vs. NCBI nr
Match:
KAA0035620.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0041646.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0047363.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0048378.1 retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 340.9 bits (873), Expect = 1.1e-89
Identity = 169/288 (58.68%), Postives = 205/288 (71.18%), Query Frame = 0
Query: 1 MVAMFLHIMAHDVKNRVVRKIFTRSGETVSRHFQFVLTAIIRCHDILFKKPEPIQPSCTD 60
MVAMFLHI+AHDVKNRV+++ F RSGET+SRHF VL A+IR H+ L KKP+P+ CTD
Sbjct: 96 MVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTD 155
Query: 61 SRWKWFE------------LQVPVENRASFRNRKSIITTNVLAVWAPSGEFIYVLAGWEG 120
RW+WFE + VP +RA +R RK + TNVL V G+F+YVLAGWEG
Sbjct: 156 QRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEG 215
Query: 121 SAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNDDGFLAPYRGERYHLSNWRG-RNPPR 180
SAADSR+LRDALSR N +VP GYYYL DAGYPN +GFLAPYRG+RYHL WRG N P
Sbjct: 216 SAADSRILRDALSRPNRLKVPKGYYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPS 275
Query: 181 NPREFFNKAHSSARNIIERAFGALKNRWAILRHKSYYPPKVQVKIITACCRLHNLICREM 240
+EFFN HSSARN+IERAFG LK RWAILR KSYYP +VQ + I ACC LHNLI REM
Sbjct: 276 TSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREM 335
Query: 241 GSTIGLEILGENDATVYQEEMDDTPTINFVETSPLWTAFRDSMAQRMF 276
+ + + E D+T DD I+++ETS W+ +RD++A+ MF
Sbjct: 336 TNFDIEDNIDEVDSTHATTAADD---IHYIETSNEWSQWRDNLAEEMF 380
BLAST of Sed0016128 vs. NCBI nr
Match:
KAA0051057.1 (retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 337.0 bits (863), Expect = 1.5e-88
Identity = 167/288 (57.99%), Postives = 203/288 (70.49%), Query Frame = 0
Query: 1 MVAMFLHIMAHDVKNRVVRKIFTRSGETVSRHFQFVLTAIIRCHDILFKKPEPIQPSCTD 60
MVAMFLHI+ HDVKNRV+++ F RSGET+SRHF VL A+IR H+ L KKP+P+ CTD
Sbjct: 96 MVAMFLHILVHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTD 155
Query: 61 SRWKWFE------------LQVPVENRASFRNRKSIITTNVLAVWAPSGEFIYVLAGWEG 120
RW+WFE + VP +RA +R RK + TNVL V G+F+YVLAGWEG
Sbjct: 156 QRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEG 215
Query: 121 SAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNDDGFLAPYRGERYHLSNWRG-RNPPR 180
SAADSR+LRDALSR N +VP GYYYL DAGYPN +GFLAPYRG+RYHL WRG N P
Sbjct: 216 SAADSRILRDALSRPNRLKVPKGYYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPS 275
Query: 181 NPREFFNKAHSSARNIIERAFGALKNRWAILRHKSYYPPKVQVKIITACCRLHNLICREM 240
+EFFN HS ARN+IERAFG LK RWAILR KSYYP +VQ + I ACC LHNLI REM
Sbjct: 276 TSKEFFNMKHSFARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREM 335
Query: 241 GSTIGLEILGENDATVYQEEMDDTPTINFVETSPLWTAFRDSMAQRMF 276
+ + + E D+T DD I+++ETS W+ +RD++A+ MF
Sbjct: 336 TNFDIEDNIDEVDSTHATTTADD---IHYIETSNEWSQWRDNLAEEMF 380
BLAST of Sed0016128 vs. NCBI nr
Match:
KAA0048361.1 (retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 336.7 bits (862), Expect = 2.0e-88
Identity = 168/288 (58.33%), Postives = 203/288 (70.49%), Query Frame = 0
Query: 1 MVAMFLHIMAHDVKNRVVRKIFTRSGETVSRHFQFVLTAIIRCHDILFKKPEPIQPSCTD 60
MVAMFLHI+AHDVKNRV+++ F RSGET+SRHF VL A+IR H+ L KKP+P+ CTD
Sbjct: 96 MVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTD 155
Query: 61 SRWKWFE------------LQVPVENRASFRNRKSIITTNVLAVWAPSGEFIYVLAGWEG 120
RWKWFE + VP +RA +R RK + TNVL V G+F+YVLAGWEG
Sbjct: 156 QRWKWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEG 215
Query: 121 SAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNDDGFLAPYRGERYHLSNWRG-RNPPR 180
AADSR+LRDALSR N +VP GYYYL DAGY N +GFLAPYRG+RYHL WRG N P
Sbjct: 216 LAADSRILRDALSRPNRLKVPKGYYYLVDAGYQNAEGFLAPYRGQRYHLQEWRGPENAPS 275
Query: 181 NPREFFNKAHSSARNIIERAFGALKNRWAILRHKSYYPPKVQVKIITACCRLHNLICREM 240
+EFFN HSSARN+IERAFG LK RWAILR KSYYP +VQ + I ACC LHNLI REM
Sbjct: 276 TSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREM 335
Query: 241 GSTIGLEILGENDATVYQEEMDDTPTINFVETSPLWTAFRDSMAQRMF 276
+ + + E D+T DD I+++ETS W+ +RD++A+ MF
Sbjct: 336 TNFDIEDNIDEVDSTHATTAADD---IHYIETSNEWSQWRDNLAEEMF 380
BLAST of Sed0016128 vs. NCBI nr
Match:
KAA0047510.1 (retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 336.7 bits (862), Expect = 2.0e-88
Identity = 167/288 (57.99%), Postives = 202/288 (70.14%), Query Frame = 0
Query: 1 MVAMFLHIMAHDVKNRVVRKIFTRSGETVSRHFQFVLTAIIRCHDILFKKPEPIQPSCTD 60
MVAMFLHI+AHDVKNRV+++ F RSGET+S HF VL A+IR H+ L KKP+P+ CTD
Sbjct: 96 MVAMFLHILAHDVKNRVIQREFMRSGETISCHFNMVLLAVIRLHEELLKKPQPVPNECTD 155
Query: 61 SRWKWFE------------LQVPVENRASFRNRKSIITTNVLAVWAPSGEFIYVLAGWEG 120
RW+WFE + VP +RA +R RK + TNVL V G+F+YVLAGWEG
Sbjct: 156 QRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDRKGDFVYVLAGWEG 215
Query: 121 SAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNDDGFLAPYRGERYHLSNWRG-RNPPR 180
SAADSR+LRDALSR NG +VP GYYYL DAGYPN +GFLAPYRG+RYHL W G N P
Sbjct: 216 SAADSRILRDALSRPNGLKVPKGYYYLVDAGYPNPEGFLAPYRGQRYHLQEWHGPENAPS 275
Query: 181 NPREFFNKAHSSARNIIERAFGALKNRWAILRHKSYYPPKVQVKIITACCRLHNLICREM 240
+EFFN H SARN+IERAFG LK RWAILR KSYYP +VQ + I ACC LHNLI REM
Sbjct: 276 TSKEFFNMKHPSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREM 335
Query: 241 GSTIGLEILGENDATVYQEEMDDTPTINFVETSPLWTAFRDSMAQRMF 276
+ + + E D+T DD I+++ETS W+ +RD +A+ MF
Sbjct: 336 TNFDIEDNIDEVDSTHATTAADD---IHYIETSNEWSQWRDDLAEEMF 380
BLAST of Sed0016128 vs. ExPASy Swiss-Prot
Match:
Q9M2U3 (Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1)
HSP 1 Score: 69.7 bits (169), Expect = 5.9e-11
Identity = 51/171 (29.82%), Postives = 78/171 (45.61%), Query Frame = 0
Query: 91 AVWAPSGEFIYVLAGWEGSAADSRVLRDA--------LSRNNGFQVPHG------YYYLC 150
AV P F+ V+AGW GS D VL+++ R NG ++P Y +
Sbjct: 219 AVVDPDMRFLDVIAGWPGSLNDDVVLKNSGFYKLVEKGKRLNGEKLPLSERTELREYIVG 278
Query: 151 DAGYPNDDGFLAPYRGERYHLSNWRGRNPPRNPREFFNKAHSSARNIIERAFGALKNRWA 210
D+G+P L PY+G+ P P+ FNK HS A + A LK+RW
Sbjct: 279 DSGFPLLPWLLTPYQGK-----------PTSLPQTEFNKRHSEATKAAQMALSKLKDRWR 338
Query: 211 ILRHKSYYPPKVQV-KIITACCRLHNLICREMGSTIGLEILGENDATVYQE 247
I+ + P + ++ +II CC LHN+I T+ + L + Y++
Sbjct: 339 IINGVMWMPDRNRLPRIIFVCCLLHNIIIDMEDQTLDDQPLSQQHDMNYRQ 378
BLAST of Sed0016128 vs. ExPASy Swiss-Prot
Match:
Q6AZB8 (Putative nuclease HARBI1 OS=Danio rerio OX=7955 GN=harbi1 PE=2 SV=1)
HSP 1 Score: 51.6 bits (122), Expect = 1.7e-05
Identity = 43/161 (26.71%), Postives = 70/161 (43.48%), Query Frame = 0
Query: 68 LQVPVENRASFRNRKSIITTNVLAVWAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQ 127
++ P + +S+ N+K + N V G + W GS D V + +
Sbjct: 155 IKAPNADDSSYVNKKGFHSINCQLVCDARGLLLSAETHWPGSLTDRAVFKQS-------- 214
Query: 128 VPHGYYYLCDAGYPNDDGFLAPYRGERYHLSNW--RGRNPPRNPREF-FNKAHSSARNII 187
L + +D+G+L RY L W P +P ++ +N AH++ I+
Sbjct: 215 ---NVAKLFEEQENDDEGWL--LGDNRYPLKKWLMTPVQSPESPADYRYNLAHTTTHEIV 274
Query: 188 ERAFGALKNRWAIL-RHKSY--YPPKVQVKIITACCRLHNL 223
+R F A++ R+ L K Y Y P+ II ACC LHN+
Sbjct: 275 DRTFRAIQTRFRCLDGAKGYLQYSPEKCSHIIQACCVLHNI 302
BLAST of Sed0016128 vs. ExPASy TrEMBL
Match:
A0A5A7TXW1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00370 PE=3 SV=1)
HSP 1 Score: 342.4 bits (877), Expect = 1.7e-90
Identity = 170/288 (59.03%), Postives = 205/288 (71.18%), Query Frame = 0
Query: 1 MVAMFLHIMAHDVKNRVVRKIFTRSGETVSRHFQFVLTAIIRCHDILFKKPEPIQPSCTD 60
MVAMFLHI+AHDVKNRV+++ F RSGET+SRHF VL A+IR HD L KKP+P+ CTD
Sbjct: 96 MVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHDELLKKPQPVPNECTD 155
Query: 61 SRWKWFE------------LQVPVENRASFRNRKSIITTNVLAVWAPSGEFIYVLAGWEG 120
RW+WFE + VP +RA +R RK + TNVL V G+F+YVLAGWEG
Sbjct: 156 QRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEG 215
Query: 121 SAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNDDGFLAPYRGERYHLSNWRG-RNPPR 180
SAADSR+LRDALSR N +VP GYYYL DAGYPN +GFLAPYRG+RYHL WRG N P
Sbjct: 216 SAADSRILRDALSRPNRLKVPKGYYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPS 275
Query: 181 NPREFFNKAHSSARNIIERAFGALKNRWAILRHKSYYPPKVQVKIITACCRLHNLICREM 240
+EFFN HSSARN+IERAFG LK RWAILR KSYYP +VQ + I ACC LHNLI REM
Sbjct: 276 TSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREM 335
Query: 241 GSTIGLEILGENDATVYQEEMDDTPTINFVETSPLWTAFRDSMAQRMF 276
+ + + E D+T DD I+++ETS W+ +RD++A+ MF
Sbjct: 336 TNFDIEDNIDEVDSTHATTAADD---IHYIETSNEWSQWRDNLAEEMF 380
BLAST of Sed0016128 vs. ExPASy TrEMBL
Match:
A0A5D3BDX0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00360 PE=3 SV=1)
HSP 1 Score: 340.9 bits (873), Expect = 5.1e-90
Identity = 169/288 (58.68%), Postives = 205/288 (71.18%), Query Frame = 0
Query: 1 MVAMFLHIMAHDVKNRVVRKIFTRSGETVSRHFQFVLTAIIRCHDILFKKPEPIQPSCTD 60
MVAMFLHI+AHDVKNRV+++ F RSGET+SRHF VL A+IR H+ L KKP+P+ CTD
Sbjct: 96 MVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTD 155
Query: 61 SRWKWFE------------LQVPVENRASFRNRKSIITTNVLAVWAPSGEFIYVLAGWEG 120
RW+WFE + VP +RA +R RK + TNVL V G+F+YVLAGWEG
Sbjct: 156 QRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEG 215
Query: 121 SAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNDDGFLAPYRGERYHLSNWRG-RNPPR 180
SAADSR+LRDALSR N +VP GYYYL DAGYPN +GFLAPYRG+RYHL WRG N P
Sbjct: 216 SAADSRILRDALSRPNRLKVPKGYYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPS 275
Query: 181 NPREFFNKAHSSARNIIERAFGALKNRWAILRHKSYYPPKVQVKIITACCRLHNLICREM 240
+EFFN HSSARN+IERAFG LK RWAILR KSYYP +VQ + I ACC LHNLI REM
Sbjct: 276 TSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREM 335
Query: 241 GSTIGLEILGENDATVYQEEMDDTPTINFVETSPLWTAFRDSMAQRMF 276
+ + + E D+T DD I+++ETS W+ +RD++A+ MF
Sbjct: 336 TNFDIEDNIDEVDSTHATTAADD---IHYIETSNEWSQWRDNLAEEMF 380
BLAST of Sed0016128 vs. ExPASy TrEMBL
Match:
A0A5A7U9H2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold678G00110 PE=3 SV=1)
HSP 1 Score: 337.0 bits (863), Expect = 7.3e-89
Identity = 167/288 (57.99%), Postives = 203/288 (70.49%), Query Frame = 0
Query: 1 MVAMFLHIMAHDVKNRVVRKIFTRSGETVSRHFQFVLTAIIRCHDILFKKPEPIQPSCTD 60
MVAMFLHI+ HDVKNRV+++ F RSGET+SRHF VL A+IR H+ L KKP+P+ CTD
Sbjct: 96 MVAMFLHILVHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTD 155
Query: 61 SRWKWFE------------LQVPVENRASFRNRKSIITTNVLAVWAPSGEFIYVLAGWEG 120
RW+WFE + VP +RA +R RK + TNVL V G+F+YVLAGWEG
Sbjct: 156 QRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEG 215
Query: 121 SAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNDDGFLAPYRGERYHLSNWRG-RNPPR 180
SAADSR+LRDALSR N +VP GYYYL DAGYPN +GFLAPYRG+RYHL WRG N P
Sbjct: 216 SAADSRILRDALSRPNRLKVPKGYYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPS 275
Query: 181 NPREFFNKAHSSARNIIERAFGALKNRWAILRHKSYYPPKVQVKIITACCRLHNLICREM 240
+EFFN HS ARN+IERAFG LK RWAILR KSYYP +VQ + I ACC LHNLI REM
Sbjct: 276 TSKEFFNMKHSFARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREM 335
Query: 241 GSTIGLEILGENDATVYQEEMDDTPTINFVETSPLWTAFRDSMAQRMF 276
+ + + E D+T DD I+++ETS W+ +RD++A+ MF
Sbjct: 336 TNFDIEDNIDEVDSTHATTTADD---IHYIETSNEWSQWRDNLAEEMF 380
BLAST of Sed0016128 vs. ExPASy TrEMBL
Match:
A0A5A7TWH8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G001380 PE=3 SV=1)
HSP 1 Score: 336.7 bits (862), Expect = 9.6e-89
Identity = 167/288 (57.99%), Postives = 202/288 (70.14%), Query Frame = 0
Query: 1 MVAMFLHIMAHDVKNRVVRKIFTRSGETVSRHFQFVLTAIIRCHDILFKKPEPIQPSCTD 60
MVAMFLHI+AHDVKNRV+++ F RSGET+S HF VL A+IR H+ L KKP+P+ CTD
Sbjct: 96 MVAMFLHILAHDVKNRVIQREFMRSGETISCHFNMVLLAVIRLHEELLKKPQPVPNECTD 155
Query: 61 SRWKWFE------------LQVPVENRASFRNRKSIITTNVLAVWAPSGEFIYVLAGWEG 120
RW+WFE + VP +RA +R RK + TNVL V G+F+YVLAGWEG
Sbjct: 156 QRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDRKGDFVYVLAGWEG 215
Query: 121 SAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNDDGFLAPYRGERYHLSNWRG-RNPPR 180
SAADSR+LRDALSR NG +VP GYYYL DAGYPN +GFLAPYRG+RYHL W G N P
Sbjct: 216 SAADSRILRDALSRPNGLKVPKGYYYLVDAGYPNPEGFLAPYRGQRYHLQEWHGPENAPS 275
Query: 181 NPREFFNKAHSSARNIIERAFGALKNRWAILRHKSYYPPKVQVKIITACCRLHNLICREM 240
+EFFN H SARN+IERAFG LK RWAILR KSYYP +VQ + I ACC LHNLI REM
Sbjct: 276 TSKEFFNMKHPSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREM 335
Query: 241 GSTIGLEILGENDATVYQEEMDDTPTINFVETSPLWTAFRDSMAQRMF 276
+ + + E D+T DD I+++ETS W+ +RD +A+ MF
Sbjct: 336 TNFDIEDNIDEVDSTHATTAADD---IHYIETSNEWSQWRDDLAEEMF 380
BLAST of Sed0016128 vs. ExPASy TrEMBL
Match:
A0A5A7U476 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00800 PE=3 SV=1)
HSP 1 Score: 336.7 bits (862), Expect = 9.6e-89
Identity = 168/288 (58.33%), Postives = 203/288 (70.49%), Query Frame = 0
Query: 1 MVAMFLHIMAHDVKNRVVRKIFTRSGETVSRHFQFVLTAIIRCHDILFKKPEPIQPSCTD 60
MVAMFLHI+AHDVKNRV+++ F RSGET+SRHF VL A+IR H+ L KKP+P+ CTD
Sbjct: 96 MVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTD 155
Query: 61 SRWKWFE------------LQVPVENRASFRNRKSIITTNVLAVWAPSGEFIYVLAGWEG 120
RWKWFE + VP +RA +R RK + TNVL V G+F+YVLAGWEG
Sbjct: 156 QRWKWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEG 215
Query: 121 SAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNDDGFLAPYRGERYHLSNWRG-RNPPR 180
AADSR+LRDALSR N +VP GYYYL DAGY N +GFLAPYRG+RYHL WRG N P
Sbjct: 216 LAADSRILRDALSRPNRLKVPKGYYYLVDAGYQNAEGFLAPYRGQRYHLQEWRGPENAPS 275
Query: 181 NPREFFNKAHSSARNIIERAFGALKNRWAILRHKSYYPPKVQVKIITACCRLHNLICREM 240
+EFFN HSSARN+IERAFG LK RWAILR KSYYP +VQ + I ACC LHNLI REM
Sbjct: 276 TSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREM 335
Query: 241 GSTIGLEILGENDATVYQEEMDDTPTINFVETSPLWTAFRDSMAQRMF 276
+ + + E D+T DD I+++ETS W+ +RD++A+ MF
Sbjct: 336 TNFDIEDNIDEVDSTHATTAADD---IHYIETSNEWSQWRDNLAEEMF 380
BLAST of Sed0016128 vs. TAIR 10
Match:
AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 161.0 bits (406), Expect = 1.4e-39
Identity = 92/232 (39.66%), Postives = 124/232 (53.45%), Query Frame = 0
Query: 2 VAMFLHIMAHDVKNRVVRKIFTRSGETVSRHFQFVLTAIIRCHDILF---------KKPE 61
+A+FL I+ H+++ R V+++F SGET+SRHF VL A+I F + +
Sbjct: 78 LAIFLFIIGHNLRTRAVQELFCYSGETISRHFNNVLNAVIAISKDFFQPNSNSDTLENDD 137
Query: 62 PIQPSCTDSRWKW-FELQVPVENRASFRNRKSIITTNVLAVWAPSGEFIYVLAGWEGSAA 121
P C + + V V+ + FRN ++T NVLA + F YVLAGWEGSA+
Sbjct: 138 PYFKDCVGVVDSFHIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSAS 197
Query: 122 DSRVLRDALSRNNGFQVPHGYYYLCDAGYPNDDGFLAPYRGERYHLSNWRGRNPPRNPRE 181
D +VL AL+R N QVP G YY+ D YPN GF+APY G N +E
Sbjct: 198 DQQVLNAALTRRNKLQVPQGKYYIVDNKYPNLPGFIAPYHGV--------STNSREEAKE 257
Query: 182 FFNKAHSSARNIIERAFGALKNRWAILRHKSYYPPKVQVKIITACCRLHNLI 224
FN+ H I R FGALK R+ IL YP + QVK++ A C LHN +
Sbjct: 258 MFNERHKLLHRAIHRTFGALKERFPILLSAPPYPLQTQVKLVIAACALHNYV 301
BLAST of Sed0016128 vs. TAIR 10
Match:
AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 119.0 bits (297), Expect = 6.0e-27
Identity = 76/196 (38.78%), Postives = 100/196 (51.02%), Query Frame = 0
Query: 99 FIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNDDGFLAPYRGERYHLS 158
FIYVL+GWEGSA DSRVL DAL + +YL D G+ N FLAP+RG RYHL
Sbjct: 25 FIYVLSGWEGSAHDSRVLSDALRK----------FYLVDCGFANRLNFLAPFRGVRYHLQ 84
Query: 159 NWRG-RNPPRNPREFFNKAHSSARNIIERAFGALKNRWAILRHKSYYPPKVQVKIITACC 218
+ G R P P E FN H S RN+IER FG K+R+AI + + K Q ++ C
Sbjct: 85 EFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCA 144
Query: 219 RLHNLI---CREMGSTIGLEILGENDA------TVYQEEMDDTPTINFV----ETSPLWT 278
LHN + CR + E+ E D + E+D+ + E + +W
Sbjct: 145 ALHNFLRKECRSDEADFPDEVGNEGDVVNNEGNAMNTNEIDNEEPLEAQKQDRENTNMW- 204
Query: 279 AFRDSMAQRMFDTAQN 281
R SMA+ M+ A N
Sbjct: 205 --RKSMAEDMWKDATN 207
BLAST of Sed0016128 vs. TAIR 10
Match:
AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )
HSP 1 Score: 108.2 bits (269), Expect = 1.1e-23
Identity = 79/221 (35.75%), Postives = 111/221 (50.23%), Query Frame = 0
Query: 2 VAMFLHIMAHDVKNRVVRKIFTRSGETVSRHFQFVLTA--IIRCHDI-------LFKKPE 61
VAMFL I H+ R V F R+ ETV R F+ VLTA ++ C I L++ PE
Sbjct: 102 VAMFLRICGHNEVYRDVGLRFGRNQETVQRKFREVLTATELLACDYIRTPTRQELYRIPE 161
Query: 62 PIQPSCTDSR-WKWFE------------LQVPVENRASFRNRKSIITTNVLAVWAPSGEF 121
+Q D R W +F ++V + + + NR + N++A+ F
Sbjct: 162 RLQ---VDQRYWPYFSGFVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICDLKMLF 221
Query: 122 IYVLAGWEGSAADSRVLRDALSRNNGFQVPHG-YYYLCDAGYPNDDGFLAPYRGE----- 181
Y+ G GS D+ VL+ A ++ F +P YYL D+GYPN G LAPYR
Sbjct: 222 TYIWNGAPGSCYDTAVLQIAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAPYRSSRNRVV 281
Query: 182 RYHLSNWRGRNPPRNPREFFNKAHSSARNIIERAFGALKNR 195
RYH+S + PRN E FN+ H+S R++IER F KN+
Sbjct: 282 RYHMSQFYYGPRPRNKHELFNQCHTSLRSVIERTFRIWKNK 319
BLAST of Sed0016128 vs. TAIR 10
Match:
AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 66.2 bits (160), Expect = 4.7e-11
Identity = 53/153 (34.64%), Postives = 72/153 (47.06%), Query Frame = 0
Query: 2 VAMFLHIMAHDVKNRVVRKIFTRSGETVSRHFQFVLTAIIRCHDILFKKPEPIQPSCTDS 61
VA+FL I A + R + F + ET+ R F VL A+ R + + +P ++ S
Sbjct: 60 VAIFLIICASNDTQRDIALRFGHAQETIWRKFHDVLKAMERL-AVEYIRPRKVEELRAIS 119
Query: 62 RWKWFELQVPVENRASFRNRKSIITTNVLAVWAPSGEFIYVLAGWEGSAADSRVLRDALS 121
LQ + I + NVLA+ F Y G GS D+RVL A+S
Sbjct: 120 N----RLQDDTRYWPFLMDLLGIASFNVLAICDLDMLFTYCFVGMAGSTHDARVLSAAIS 179
Query: 122 RNNGFQV-PHGYYYLCDAGYPNDDGFLAPYRGE 154
+ F V P YYL D+GY N G+LAPYR E
Sbjct: 180 DDPLFHVPPDSKYYLVDSGYANKRGYLAPYRRE 207
BLAST of Sed0016128 vs. TAIR 10
Match:
AT4G10890.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 65.9 bits (159), Expect = 6.1e-11
Identity = 36/92 (39.13%), Postives = 51/92 (55.43%), Query Frame = 0
Query: 112 DSRVLRDALSRNNGFQVPH---GYYYLCDAGYPNDDGFLAPYRGERYHLSNWRGRNPPRN 171
D++VL+ +RN F PH YYL ++ YP G+L P+R YHL + PP
Sbjct: 73 DTKVLK-YCARNESFS-PHPSNRKYYLVNSVYPTTTGYLGPHRRILYHLGQFGRGGPPVT 132
Query: 172 PREFFNKAHSSARNIIERAFGALKNRWAILRH 201
+E FN+ H R++I+R FG K +W IL H
Sbjct: 133 VQELFNRKHLDLRSVIDRTFGVWKAKWRILDH 162
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0046727.1 | 3.6e-90 | 59.03 | retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon... | [more] |
KAA0035620.1 | 1.1e-89 | 58.68 | retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon... | [more] |
KAA0051057.1 | 1.5e-88 | 57.99 | retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAA0048361.1 | 2.0e-88 | 58.33 | retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAA0047510.1 | 2.0e-88 | 57.99 | retrotransposon protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Q9M2U3 | 5.9e-11 | 29.82 | Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1 | [more] |
Q6AZB8 | 1.7e-05 | 26.71 | Putative nuclease HARBI1 OS=Danio rerio OX=7955 GN=harbi1 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7TXW1 | 1.7e-90 | 59.03 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3BDX0 | 5.1e-90 | 58.68 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7U9H2 | 7.3e-89 | 57.99 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7TWH8 | 9.6e-89 | 57.99 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7U476 | 9.6e-89 | 58.33 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
AT5G41980.1 | 1.4e-39 | 39.66 | CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int... | [more] |
AT5G35695.1 | 6.0e-27 | 38.78 | CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int... | [more] |
AT1G43722.1 | 1.1e-23 | 35.75 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT5G28730.1 | 4.7e-11 | 34.64 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT4G10890.1 | 6.1e-11 | 39.13 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439... | [more] |