Sed0016065 (gene) Chayote v1

Overview


Name	Sed0016065
Type	gene
Organism	Sechium edule (Chayote v1)
Description	dehydration-responsive element-binding protein 2D-like
Location	LG01: 18865626 .. 18866120 (-)
RNA-Seq Expression	Sed0016065
Synteny	Sed0016065

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCGACAAAAGAGATCGAACAACAACAACGTTGCTCAAGCCAGCTCTCGCAAGGGCTGCATGCGAGGCAAGGGCGGTCCGGACAACGCCTCTTGCACTTTCAAAGGCGTCCGCCAGCGCACTTGGGGCAAATGGGTCGCTGAGATTCGTGAGCCGAATCGCGGTGCTCGGCTATGGCTTGGCACTTTCGAAACCGCCCATGAAGCTGCCGTGGCTTACGACGCTGCCGCTCGTAAGCTCTACGGCTCCGACGCCAAGCTTAACCTCCCTCAAATTGCTTCCGAGCCTCAACGGTCCTTGCCGAGTGATGTGATGTCGTCGTCGACATCGTCGCTGCCCGTGGTCGGACAGTGGGGAAGCGAGGATGTGAATTTTGATGAGTCCATATGGAGGGAGGCTGTTATGTCTTTGGATTTCCCTATTGTTGAAGATGATCAAGGGTTTTATTGTGATGGGGTCAACAATTGGGATACTTTGCAGTGGTGCATGTGA

mRNA sequence

ATGGACCGACAAAAGAGATCGAACAACAACAACGTTGCTCAAGCCAGCTCTCGCAAGGGCTGCATGCGAGGCAAGGGCGGTCCGGACAACGCCTCTTGCACTTTCAAAGGCGTCCGCCAGCGCACTTGGGGCAAATGGGTCGCTGAGATTCGTGAGCCGAATCGCGGTGCTCGGCTATGGCTTGGCACTTTCGAAACCGCCCATGAAGCTGCCGTGGCTTACGACGCTGCCGCTCGTAAGCTCTACGGCTCCGACGCCAAGCTTAACCTCCCTCAAATTGCTTCCGAGCCTCAACGGTCCTTGCCGAGTGATGTGATGTCGTCGTCGACATCGTCGCTGCCCGTGGTCGGACAGTGGGGAAGCGAGGATGTGAATTTTGATGAGTCCATATGGAGGGAGGCTGTTATGTCTTTGGATTTCCCTATTGTTGAAGATGATCAAGGGTTTTATTGTGATGGGGTCAACAATTGGGATACTTTGCAGTGGTGCATGTGA

Coding sequence (CDS)

ATGGACCGACAAAAGAGATCGAACAACAACAACGTTGCTCAAGCCAGCTCTCGCAAGGGCTGCATGCGAGGCAAGGGCGGTCCGGACAACGCCTCTTGCACTTTCAAAGGCGTCCGCCAGCGCACTTGGGGCAAATGGGTCGCTGAGATTCGTGAGCCGAATCGCGGTGCTCGGCTATGGCTTGGCACTTTCGAAACCGCCCATGAAGCTGCCGTGGCTTACGACGCTGCCGCTCGTAAGCTCTACGGCTCCGACGCCAAGCTTAACCTCCCTCAAATTGCTTCCGAGCCTCAACGGTCCTTGCCGAGTGATGTGATGTCGTCGTCGACATCGTCGCTGCCCGTGGTCGGACAGTGGGGAAGCGAGGATGTGAATTTTGATGAGTCCATATGGAGGGAGGCTGTTATGTCTTTGGATTTCCCTATTGTTGAAGATGATCAAGGGTTTTATTGTGATGGGGTCAACAATTGGGATACTTTGCAGTGGTGCATGTGA

Protein sequence

MDRQKRSNNNNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLWLGTFETAHEAAVAYDAAARKLYGSDAKLNLPQIASEPQRSLPSDVMSSSTSSLPVVGQWGSEDVNFDESIWREAVMSLDFPIVEDDQGFYCDGVNNWDTLQWCM

Homology

[Close]

BLAST of Sed0016065 vs. NCBI nr
Match: XP_022940041.1 (dehydration-responsive element-binding protein 2D-like [Cucurbita moschata] >KAG6608564.1 Dehydration-responsive element-binding protein 2D, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 266.9 bits (681), Expect = 1.1e-67
Identity = 130/168 (77.38%), Postives = 142/168 (84.52%), Query Frame = 0


Query: 1   MDRQKRSNNNNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW 60
           M+ + R    NVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW
Sbjct: 1   METKPRKPTTNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW 60

Query: 61  LGTFETAHEAAVAYDAAARKLYGSDAKLNLPQIASEPQRSLPSDVMSSSTSSL----PVV 120
           LGTF+TAHEAAVAYDAAARKLYGSDAKLNLPQ ASEPQ+S P+  M S +  +    P+ 
Sbjct: 61  LGTFDTAHEAAVAYDAAARKLYGSDAKLNLPQTASEPQQSAPTAAMPSPSPPVAEMDPIG 120

Query: 121 GQWGSEDVNFDESIWREAVMSLDFPIVEDDQGFYCDGVNNWDTLQWCM 165
           G WGSEDVNFDESIWREAVMSLDFP++ DD+GFY DGV   D +QWCM
Sbjct: 121 GLWGSEDVNFDESIWREAVMSLDFPMIGDDEGFYFDGVGGRDAMQWCM 168

[Close]

BLAST of Sed0016065 vs. NCBI nr
Match: XP_022981906.1 (dehydration-responsive element-binding protein 2D-like [Cucurbita maxima])

HSP 1 Score: 266.9 bits (681), Expect = 1.1e-67
Identity = 130/168 (77.38%), Postives = 142/168 (84.52%), Query Frame = 0


Query: 1   MDRQKRSNNNNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW 60
           M+ + R    NVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW
Sbjct: 1   METKPRKPTTNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW 60

Query: 61  LGTFETAHEAAVAYDAAARKLYGSDAKLNLPQIASEPQRSLPSDVMSSSTSSL----PVV 120
           LGTF+TAHEAAVAYDAAARKLYGSDAKLNLPQ ASEPQ+S P+  M S +  +    P+ 
Sbjct: 61  LGTFDTAHEAAVAYDAAARKLYGSDAKLNLPQTASEPQQSAPTAAMPSPSPPVAEMEPIG 120

Query: 121 GQWGSEDVNFDESIWREAVMSLDFPIVEDDQGFYCDGVNNWDTLQWCM 165
           G WGSEDVNFDESIWREAVMSLDFP++ DD+GFY DGV   D +QWCM
Sbjct: 121 GLWGSEDVNFDESIWREAVMSLDFPMIGDDEGFYFDGVGGRDAMQWCM 168

[Close]

BLAST of Sed0016065 vs. NCBI nr
Match: XP_023525554.1 (dehydration-responsive element-binding protein 2D-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.5 bits (680), Expect = 1.5e-67
Identity = 130/168 (77.38%), Postives = 143/168 (85.12%), Query Frame = 0


Query: 1   MDRQKRSNNNNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW 60
           M+ + R    NVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIR+PNRGARLW
Sbjct: 1   METKPRKPTTNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIRQPNRGARLW 60

Query: 61  LGTFETAHEAAVAYDAAARKLYGSDAKLNLPQIASEPQRSLPSDVMSSSTSSL----PVV 120
           LGTF+TAHEAAVAYDAAARKLYGSDAKLNLPQ ASEPQ+S P+  M S++  +    PV 
Sbjct: 61  LGTFDTAHEAAVAYDAAARKLYGSDAKLNLPQTASEPQQSAPTVAMPSASPPVAEMEPVG 120

Query: 121 GQWGSEDVNFDESIWREAVMSLDFPIVEDDQGFYCDGVNNWDTLQWCM 165
           G WGSEDVNFDESIWREAVMSLDFP++ DD+GFY DGV   D +QWCM
Sbjct: 121 GLWGSEDVNFDESIWREAVMSLDFPMIGDDEGFYFDGVGGRDAMQWCM 168

[Close]

BLAST of Sed0016065 vs. NCBI nr
Match: XP_038899630.1 (dehydration-responsive element-binding protein 2D-like [Benincasa hispida])

HSP 1 Score: 256.9 bits (655), Expect = 1.2e-64
Identity = 126/168 (75.00%), Postives = 139/168 (82.74%), Query Frame = 0


Query: 10  NNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLWLGTFETAHE 69
           N+VAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLWLGTF+TAHE
Sbjct: 12  NSVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTAHE 71

Query: 70  AAVAYDAAARKLYGSDAKLNLPQIASEPQRSL------------PSDVMSSSTSSLPVVG 129
           AAVAYDAAARKLYGS+AKLNLPQ    P   L             +  M S +SS+  +G
Sbjct: 72  AAVAYDAAARKLYGSEAKLNLPQTTPPPHDQLSQLEHGGQPSPTATTTMKSLSSSVERIG 131

Query: 130 Q-WGSEDVNFDESIWREAVMSLDFPIVEDDQGFYCDGVNNWDTLQWCM 165
           + WGSE+VNFDESIWREAVMSLDFPI++DDQG + DGV+NWDTLQWCM
Sbjct: 132 ELWGSENVNFDESIWREAVMSLDFPIIQDDQGIFFDGVSNWDTLQWCM 179

[Close]

BLAST of Sed0016065 vs. NCBI nr
Match: XP_008466672.1 (PREDICTED: dehydration-responsive element-binding protein 2D [Cucumis melo] >KAA0063237.1 dehydration-responsive element-binding protein 2D [Cucumis melo var. makuwa])

HSP 1 Score: 253.4 bits (646), Expect = 1.3e-63
Identity = 130/185 (70.27%), Postives = 145/185 (78.38%), Query Frame = 0


Query: 1   MDRQKRSNNNNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW 60
           MDR+ R+ NNNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW
Sbjct: 1   MDRKSRT-NNNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW 60

Query: 61  LGTFETAHEAAVAYDAAARKLYGSDAKLNLPQIASEPQR-----------------SLPS 120
           LGTF+TAHEAA+AYDAAARKLYGS+AKLNLPQ  + P                   + PS
Sbjct: 61  LGTFDTAHEAALAYDAAARKLYGSEAKLNLPQTTTTPHELPQLEHGGQSPSNNNIIASPS 120

Query: 121 DVMSSST-SSLPVV---GQWGSEDVNFDESIWREAVMSLDFPIVEDDQGFYCDGVNNWDT 165
              S++T SS P+    G W +E+VNFDESIWREAVMSLDFPI+EDDQG + DG  +WDT
Sbjct: 121 PTSSTTTMSSSPIERIGGLWENENVNFDESIWREAVMSLDFPIIEDDQGIFFDGAGSWDT 180

[Close]

BLAST of Sed0016065 vs. ExPASy Swiss-Prot
Match: Q9LQZ2 (Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana OX=3702 GN=DREB2D PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.0e-39
Identity = 96/188 (51.06%), Postives = 111/188 (59.04%), Query Frame = 0


Query: 7   SNNNNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLWLGTFET 66
           +      QASSRKGCMRGKGGPDNASCT+KGVRQRTWGKWVAEIREPNRGARLWLGTF+T
Sbjct: 14  NKKQRTVQASSRKGCMRGKGGPDNASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDT 73

Query: 67  AHEAAVAYDAAARKLYGSDAKLNLPQI-----------ASEPQRSLPSDVMSSSTSSLP- 126
           + EAA+AYD+AARKLYG +A LNLP+            AS+   S  +   SSS S  P 
Sbjct: 74  SREAALAYDSAARKLYGPEAHLNLPESLRSYPKTASSPASQTTPSSNTGGKSSSDSESPC 133

Query: 127 ----------VVGQWGSEDVNF------DESIWREAVMSLDFPIVEDDQG-------FYC 160
                     V  +   E +N       D SIW EA MSL FP V +             
Sbjct: 134 SSNEMSSCGRVTEEISWEHINVDLPVMDDSSIWEEATMSLGFPWVHEGDNDISRFDTCIS 193

[Close]

BLAST of Sed0016065 vs. ExPASy Swiss-Prot
Match: P61827 (Dehydration-responsive element-binding protein 2G OS=Arabidopsis thaliana OX=3702 GN=DREB2G PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 6.7e-31
Identity = 61/74 (82.43%), Postives = 69/74 (93.24%), Query Frame = 0


Query: 17 SRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLWLGTFETAHEAAVAYDA 76
          SRKGCM+GKGGP+NA+CTF+GVRQRTWGKWVAEIREPNRG RLWLGTF T+ EAA+AYD 
Sbjct: 16 SRKGCMKGKGGPENATCTFRGVRQRTWGKWVAEIREPNRGTRLWLGTFNTSVEAAMAYDE 75

Query: 77 AARKLYGSDAKLNL 91
          AA+KLYG +AKLNL
Sbjct: 76 AAKKLYGHEAKLNL 89

[Close]

BLAST of Sed0016065 vs. ExPASy Swiss-Prot
Match: Q8LFR2 (Dehydration-responsive element-binding protein 2C OS=Arabidopsis thaliana OX=3702 GN=DREB2C PE=2 SV=2)

HSP 1 Score: 125.6 bits (314), Expect = 5.3e-28
Identity = 56/96 (58.33%), Postives = 75/96 (78.12%), Query Frame = 0


Query: 17  SRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLWLGTFETAHEAAVAYDA 76
           SRKGCM+GKGGP+N  C ++GVRQR WGKWVAEIREP+ GARLWLGTF +++EAA+AYD 
Sbjct: 54  SRKGCMKGKGGPENGICDYRGVRQRRWGKWVAEIREPDGGARLWLGTFSSSYEAALAYDE 113

Query: 77  AARKLYGSDAKLNLPQIASEPQRSLPSDVMSSSTSS 113
           AA+ +YG  A+LNLP+I +    +  +  +S S ++
Sbjct: 114 AAKAIYGQSARLNLPEITNRSSSTAATATVSGSVTA 149

[Close]

BLAST of Sed0016065 vs. ExPASy Swiss-Prot
Match: Q84ZA1 (Dehydration-responsive element-binding protein 2C OS=Oryza sativa subsp. japonica OX=39947 GN=DREB2C PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.3e-28
Identity = 68/128 (53.12%), Postives = 82/128 (64.06%), Query Frame = 0


Query: 3   RQKRSNNNNVAQAS---------SRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREP 62
           R+K+    N++ +          SRKGCM+GKGGP+N  C F+GVRQRTWGKWVAEIREP
Sbjct: 14  RRKQQQQQNISSSKSRKCCPLRRSRKGCMKGKGGPENQRCPFRGVRQRTWGKWVAEIREP 73

Query: 63  NRGARLWLGTFETAHEAAVAYDAAARKLYGSDAKLNL---------PQIASEPQRSLPSD 113
           NRGARLWLGTF TA +AA AYD+AAR LYG  A+LNL         P  A+ P  + P  
Sbjct: 74  NRGARLWLGTFNTALDAARAYDSAARALYGDCARLNLLLAAATAGAPPAAATPSVATPCS 133

[Close]

BLAST of Sed0016065 vs. ExPASy Swiss-Prot
Match: O82132 (Dehydration-responsive element-binding protein 2A OS=Arabidopsis thaliana OX=3702 GN=DREB2A PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 7.0e-28
Identity = 63/106 (59.43%), Postives = 77/106 (72.64%), Query Frame = 0


Query: 7   SNNNNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLWLGTFET 66
           +    V    S+KGCM+GKGGP+N+ C+F+GVRQR WGKWVAEIREPNRG+RLWLGTF T
Sbjct: 51  TKKRKVPAKGSKKGCMKGKGGPENSRCSFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPT 110

Query: 67  AHEAAVAYDAAARKLYGSDAKLNLPQIASEPQRSLPSDVMSSSTSS 113
           A EAA AYD AA+ +YG  A+LN P       RS  S+V S+S+ S
Sbjct: 111 AQEAASAYDEAAKAMYGPLARLNFP-------RSDASEVTSTSSQS 149

[Close]

BLAST of Sed0016065 vs. ExPASy TrEMBL
Match: A0A6J1IXV0 (dehydration-responsive element-binding protein 2D-like OS=Cucurbita maxima OX=3661 GN=LOC111480905 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 5.5e-68
Identity = 130/168 (77.38%), Postives = 142/168 (84.52%), Query Frame = 0


Query: 1   MDRQKRSNNNNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW 60
           M+ + R    NVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW
Sbjct: 1   METKPRKPTTNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW 60

Query: 61  LGTFETAHEAAVAYDAAARKLYGSDAKLNLPQIASEPQRSLPSDVMSSSTSSL----PVV 120
           LGTF+TAHEAAVAYDAAARKLYGSDAKLNLPQ ASEPQ+S P+  M S +  +    P+ 
Sbjct: 61  LGTFDTAHEAAVAYDAAARKLYGSDAKLNLPQTASEPQQSAPTAAMPSPSPPVAEMEPIG 120

Query: 121 GQWGSEDVNFDESIWREAVMSLDFPIVEDDQGFYCDGVNNWDTLQWCM 165
           G WGSEDVNFDESIWREAVMSLDFP++ DD+GFY DGV   D +QWCM
Sbjct: 121 GLWGSEDVNFDESIWREAVMSLDFPMIGDDEGFYFDGVGGRDAMQWCM 168

[Close]

BLAST of Sed0016065 vs. ExPASy TrEMBL
Match: A0A6J1FHE4 (dehydration-responsive element-binding protein 2D-like OS=Cucurbita moschata OX=3662 GN=LOC111445792 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 5.5e-68
Identity = 130/168 (77.38%), Postives = 142/168 (84.52%), Query Frame = 0


Query: 1   MDRQKRSNNNNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW 60
           M+ + R    NVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW
Sbjct: 1   METKPRKPTTNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW 60

Query: 61  LGTFETAHEAAVAYDAAARKLYGSDAKLNLPQIASEPQRSLPSDVMSSSTSSL----PVV 120
           LGTF+TAHEAAVAYDAAARKLYGSDAKLNLPQ ASEPQ+S P+  M S +  +    P+ 
Sbjct: 61  LGTFDTAHEAAVAYDAAARKLYGSDAKLNLPQTASEPQQSAPTAAMPSPSPPVAEMDPIG 120

Query: 121 GQWGSEDVNFDESIWREAVMSLDFPIVEDDQGFYCDGVNNWDTLQWCM 165
           G WGSEDVNFDESIWREAVMSLDFP++ DD+GFY DGV   D +QWCM
Sbjct: 121 GLWGSEDVNFDESIWREAVMSLDFPMIGDDEGFYFDGVGGRDAMQWCM 168

[Close]

BLAST of Sed0016065 vs. ExPASy TrEMBL
Match: A0A5A7V8B4 (Dehydration-responsive element-binding protein 2D OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G00500 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.3e-64
Identity = 130/185 (70.27%), Postives = 145/185 (78.38%), Query Frame = 0


Query: 1   MDRQKRSNNNNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW 60
           MDR+ R+ NNNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW
Sbjct: 1   MDRKSRT-NNNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW 60

Query: 61  LGTFETAHEAAVAYDAAARKLYGSDAKLNLPQIASEPQR-----------------SLPS 120
           LGTF+TAHEAA+AYDAAARKLYGS+AKLNLPQ  + P                   + PS
Sbjct: 61  LGTFDTAHEAALAYDAAARKLYGSEAKLNLPQTTTTPHELPQLEHGGQSPSNNNIIASPS 120

Query: 121 DVMSSST-SSLPVV---GQWGSEDVNFDESIWREAVMSLDFPIVEDDQGFYCDGVNNWDT 165
              S++T SS P+    G W +E+VNFDESIWREAVMSLDFPI+EDDQG + DG  +WDT
Sbjct: 121 PTSSTTTMSSSPIERIGGLWENENVNFDESIWREAVMSLDFPIIEDDQGIFFDGAGSWDT 180

[Close]

BLAST of Sed0016065 vs. ExPASy TrEMBL
Match: A0A1S3CRS6 (dehydration-responsive element-binding protein 2D OS=Cucumis melo OX=3656 GN=LOC103504026 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.3e-64
Identity = 130/185 (70.27%), Postives = 145/185 (78.38%), Query Frame = 0


Query: 1   MDRQKRSNNNNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW 60
           MDR+ R+ NNNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW
Sbjct: 1   MDRKSRT-NNNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW 60

Query: 61  LGTFETAHEAAVAYDAAARKLYGSDAKLNLPQIASEPQR-----------------SLPS 120
           LGTF+TAHEAA+AYDAAARKLYGS+AKLNLPQ  + P                   + PS
Sbjct: 61  LGTFDTAHEAALAYDAAARKLYGSEAKLNLPQTTTTPHELPQLEHGGQSPSNNNIIASPS 120

Query: 121 DVMSSST-SSLPVV---GQWGSEDVNFDESIWREAVMSLDFPIVEDDQGFYCDGVNNWDT 165
              S++T SS P+    G W +E+VNFDESIWREAVMSLDFPI+EDDQG + DG  +WDT
Sbjct: 121 PTSSTTTMSSSPIERIGGLWENENVNFDESIWREAVMSLDFPIIEDDQGIFFDGAGSWDT 180

[Close]

BLAST of Sed0016065 vs. ExPASy TrEMBL
Match: A0A0A0LE58 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G865380 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 6.5e-61
Identity = 127/185 (68.65%), Postives = 145/185 (78.38%), Query Frame = 0


Query: 1   MDRQKRSNNNNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLW 60
           MDR+ R+ NNNVAQASSRKGCMRGKGGPDNA+CTFKGVRQRTWGKWVAEIREPNRGARLW
Sbjct: 1   MDRKSRT-NNNVAQASSRKGCMRGKGGPDNAACTFKGVRQRTWGKWVAEIREPNRGARLW 60

Query: 61  LGTFETAHEAAVAYDAAARKLYGSDAKLNLPQIASE----PQR-------------SLPS 120
           LGTF+TAHEAA+AYDAAARKLYGS+AKLNLPQ  +     PQ              + PS
Sbjct: 61  LGTFDTAHEAALAYDAAARKLYGSEAKLNLPQTTTTSHELPQLEHGGQSPSNNNIIASPS 120

Query: 121 DVMSSST-SSLPVV---GQWGSEDVNFDESIWREAVMSLDFPIVEDDQGFYCDGVNNWDT 165
              +++T SS P+    G W +E+VNFDESIWREAVMSLDFPI+E+DQG + DG  +WD 
Sbjct: 121 PTGTTTTVSSSPIERIGGLWENENVNFDESIWREAVMSLDFPIIENDQGIFFDGAGSWDA 180

[Close]

BLAST of Sed0016065 vs. TAIR 10
Match: AT1G75490.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 162.9 bits (411), Expect = 2.1e-40
Identity = 96/188 (51.06%), Postives = 111/188 (59.04%), Query Frame = 0


Query: 7   SNNNNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLWLGTFET 66
           +      QASSRKGCMRGKGGPDNASCT+KGVRQRTWGKWVAEIREPNRGARLWLGTF+T
Sbjct: 14  NKKQRTVQASSRKGCMRGKGGPDNASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDT 73

Query: 67  AHEAAVAYDAAARKLYGSDAKLNLPQI-----------ASEPQRSLPSDVMSSSTSSLP- 126
           + EAA+AYD+AARKLYG +A LNLP+            AS+   S  +   SSS S  P 
Sbjct: 74  SREAALAYDSAARKLYGPEAHLNLPESLRSYPKTASSPASQTTPSSNTGGKSSSDSESPC 133

Query: 127 ----------VVGQWGSEDVNF------DESIWREAVMSLDFPIVEDDQG-------FYC 160
                     V  +   E +N       D SIW EA MSL FP V +             
Sbjct: 134 SSNEMSSCGRVTEEISWEHINVDLPVMDDSSIWEEATMSLGFPWVHEGDNDISRFDTCIS 193

[Close]

BLAST of Sed0016065 vs. TAIR 10
Match: AT5G18450.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 135.2 bits (339), Expect = 4.8e-32
Identity = 61/74 (82.43%), Postives = 69/74 (93.24%), Query Frame = 0


Query: 17 SRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLWLGTFETAHEAAVAYDA 76
          SRKGCM+GKGGP+NA+CTF+GVRQRTWGKWVAEIREPNRG RLWLGTF T+ EAA+AYD 
Sbjct: 16 SRKGCMKGKGGPENATCTFRGVRQRTWGKWVAEIREPNRGTRLWLGTFNTSVEAAMAYDE 75

Query: 77 AARKLYGSDAKLNL 91
          AA+KLYG +AKLNL
Sbjct: 76 AAKKLYGHEAKLNL 89

[Close]

BLAST of Sed0016065 vs. TAIR 10
Match: AT2G40340.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 3.8e-29
Identity = 56/96 (58.33%), Postives = 75/96 (78.12%), Query Frame = 0


Query: 17  SRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLWLGTFETAHEAAVAYDA 76
           SRKGCM+GKGGP+N  C ++GVRQR WGKWVAEIREP+ GARLWLGTF +++EAA+AYD 
Sbjct: 54  SRKGCMKGKGGPENGICDYRGVRQRRWGKWVAEIREPDGGARLWLGTFSSSYEAALAYDE 113

Query: 77  AARKLYGSDAKLNLPQIASEPQRSLPSDVMSSSTSS 113
           AA+ +YG  A+LNLP+I +    +  +  +S S ++
Sbjct: 114 AAKAIYGQSARLNLPEITNRSSSTAATATVSGSVTA 149

[Close]

BLAST of Sed0016065 vs. TAIR 10
Match: AT5G05410.1 (DRE-binding protein 2A )

HSP 1 Score: 125.2 bits (313), Expect = 4.9e-29
Identity = 63/106 (59.43%), Postives = 77/106 (72.64%), Query Frame = 0


Query: 7   SNNNNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLWLGTFET 66
           +    V    S+KGCM+GKGGP+N+ C+F+GVRQR WGKWVAEIREPNRG+RLWLGTF T
Sbjct: 51  TKKRKVPAKGSKKGCMKGKGGPENSRCSFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPT 110

Query: 67  AHEAAVAYDAAARKLYGSDAKLNLPQIASEPQRSLPSDVMSSSTSS 113
           A EAA AYD AA+ +YG  A+LN P       RS  S+V S+S+ S
Sbjct: 111 AQEAASAYDEAAKAMYGPLARLNFP-------RSDASEVTSTSSQS 149

[Close]

BLAST of Sed0016065 vs. TAIR 10
Match: AT5G05410.2 (DRE-binding protein 2A )

HSP 1 Score: 125.2 bits (313), Expect = 4.9e-29
Identity = 63/106 (59.43%), Postives = 77/106 (72.64%), Query Frame = 0


Query: 7   SNNNNVAQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLWLGTFET 66
           +    V    S+KGCM+GKGGP+N+ C+F+GVRQR WGKWVAEIREPNRG+RLWLGTF T
Sbjct: 51  TKKRKVPAKGSKKGCMKGKGGPENSRCSFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPT 110

Query: 67  AHEAAVAYDAAARKLYGSDAKLNLPQIASEPQRSLPSDVMSSSTSS 113
           A EAA AYD AA+ +YG  A+LN P       RS  S+V S+S+ S
Sbjct: 111 AQEAASAYDEAAKAMYGPLARLNFP-------RSDASEVTSTSSQS 149

The following BLAST results are available for this feature:

BLAST of Sed0016065 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940041.1	1.1e-67	77.38	dehydration-responsive element-binding protein 2D-like [Cucurbita moschata] >KAG...	[more]
XP_022981906.1	1.1e-67	77.38	dehydration-responsive element-binding protein 2D-like [Cucurbita maxima]	[more]
XP_023525554.1	1.5e-67	77.38	dehydration-responsive element-binding protein 2D-like [Cucurbita pepo subsp. pe...	[more]
XP_038899630.1	1.2e-64	75.00	dehydration-responsive element-binding protein 2D-like [Benincasa hispida]	[more]
XP_008466672.1	1.3e-63	70.27	PREDICTED: dehydration-responsive element-binding protein 2D [Cucumis melo] >KAA...	[more]

BLAST of Sed0016065 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQZ2	3.0e-39	51.06	Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana OX=370...	[more]
P61827	6.7e-31	82.43	Dehydration-responsive element-binding protein 2G OS=Arabidopsis thaliana OX=370...	[more]
Q8LFR2	5.3e-28	58.33	Dehydration-responsive element-binding protein 2C OS=Arabidopsis thaliana OX=370...	[more]
Q84ZA1	5.3e-28	53.13	Dehydration-responsive element-binding protein 2C OS=Oryza sativa subsp. japonic...	[more]
O82132	7.0e-28	59.43	Dehydration-responsive element-binding protein 2A OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Sed0016065 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IXV0	5.5e-68	77.38	dehydration-responsive element-binding protein 2D-like OS=Cucurbita maxima OX=36...	[more]
A0A6J1FHE4	5.5e-68	77.38	dehydration-responsive element-binding protein 2D-like OS=Cucurbita moschata OX=...	[more]
A0A5A7V8B4	6.3e-64	70.27	Dehydration-responsive element-binding protein 2D OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3CRS6	6.3e-64	70.27	dehydration-responsive element-binding protein 2D OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0LE58	6.5e-61	68.65	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G865380 PE=...	[more]

BLAST of Sed0016065 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75490.1	2.1e-40	51.06	Integrase-type DNA-binding superfamily protein	[more]
AT5G18450.1	4.8e-32	82.43	Integrase-type DNA-binding superfamily protein	[more]
AT2G40340.1	3.8e-29	58.33	Integrase-type DNA-binding superfamily protein	[more]
AT5G05410.1	4.9e-29	59.43	DRE-binding protein 2A	[more]
AT5G05410.2	4.9e-29	59.43	DRE-binding protein 2A	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 57..73 score: 64.49 coord: 35..46 score: 58.94
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 34..97 e-value: 9.0E-35 score: 131.5
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 34..83 e-value: 1.1E-13 score: 51.1
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 34..91 score: 22.11517
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 33..91 e-value: 2.11393E-21 score: 80.0083
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 34..92 e-value: 3.6E-25 score: 89.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	PANTHER	PTHR31241	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C	coord: 9..108
None	No IPR available	PANTHER	PTHR31241	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C	coord: 119..157
None	No IPR available	PANTHER	PTHR31241:SF53	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2D	coord: 9..108
None	No IPR available	PANTHER	PTHR31241:SF53	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2D	coord: 119..157
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 34..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016065.1	Sed0016065.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0003677	DNA binding