Sed0016021 (gene) Chayote v1

Overview
NameSed0016021
Typegene
OrganismSechium edule (Chayote v1)
Descriptionprotein E6-like
LocationLG04: 43044219 .. 43045808 (-)
RNA-Seq ExpressionSed0016021
SyntenySed0016021
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCATTATTTAAAAATATTCTTAAAAAGGAAAAGAAAATAAAAAAGGGTGGTGTTTTAGCTTTTTGGCGCCATAAAAATTAGGTGCGCCTGTATTAGTGGACATTCAAGTGGGAATTGCACATGCAGCGTGCACCATGTTTTCCATTATCATTATGTTTTCTTCTACCCCACCACTGTTCTTCTTCTTCTCCATTCTAATTCCCACAATCCCCGCATAATTCATCGCAATCAAAATCAAACTCCATTTTTATAAATTCAAACCAAAATCAAAATCAAACCAAACATTTGCATACCTTTTCTCCACTTCAATGGCTATGGCTATGGCTATGGCTTCCACCTCCAAGCACTTCTTCTTCTTCCTCCTCCTCCTCGTCCTCTCCTCTGCACAAACCGAAGCCAGAGTCAGCAAATTCTTCAGCAAATTCATCCATACTCAAAACAACGAAGTTCCTCAACTCACTCCGACCTCTGATCTTCCGCTACCTCCGTCTCCGGCGCCGGAGATCTCTCCGATCTTCCCGCCGATTGAGGCTCCCGCGCCGTTTTTCGACGAATCGCAGAACGCGTACGGTCTGTACGGCCGAGACGCCGGCGACGGCGAGAGAAGCCGGACGATCACCGACGTGGAGGAGGAGATCCTCGCGGACAACGGCGACGGCGAGGAAAACACCAGATCTGGCTATCCGGATACGAAATTACAGAGTGACGATTTCGGAAGCCCTAGGCGATACGAGCAGAATCAAAACAACTACAAAAACAACAACGGATACAGAAATTCGGAATTCGAGAACAATGAACACAGAAATTCAGAGTACGAGAGCAATTTCGAGAACAACGGCGAGAGAAATTACCAGTACCAGAGCAATTTTGAGAACAACGGCGAGAGAAATTACCAGTACCAGAGCAATTTCGAGAACAACGGCGACGGCTACAGACAGAGGCGATACGAACCGTCGGAGCGGCAGGGGATGAGCGACACCAGATTCGTCGAGAACGGGCGATACTTTCACGATGTTAACTCGAGAAATGGAGAAAATGATCAAGGCGAATCGTTCGGGAATTACAAGAAGAATCAATACGAGTTTGATTCGATGGAGGAGTACGAGAAGAGTGAGGGATTTCTTCCTTGATGCAGAGAGGGGAACTTTTCTAGGGTTTATAGCTTCATCTTGAACCCCTAAATTATGGAGGTTTTTGTGTTTCTGTCCGTTTGTGTTTGTGATTTTGGTGTTTTTTTTTTGTAATCTTTGAGTTGTGATTGTTTTTGCACAACTTGGATTTAGTGTTCTGGGGTTTGAATTTTATACAATGGGAAATTATGTATGCGTTTTGGATTTAAAAAGTGATACAAACAAAAATGATGCTTTCATTTTGGAATTAAATTCCACAATGAGATCATTTTTTAATACAAGAAGGGAAAGGAGGATATAACCTATAATTTCGTGTTATTAGATTATAATTTATGTCGGTAGAAGTTTACTGCTCTTCTCAGTGTGTAGACCAATTTAAGAGTATTAGATTGATGCATTACTCTTGTTTGGTTCAACTACATTATTTAAGTTTAAATATTTATGTAACATTTTATGCGG

mRNA sequence

CTCATTATTTAAAAATATTCTTAAAAAGGAAAAGAAAATAAAAAAGGGTGGTGTTTTAGCTTTTTGGCGCCATAAAAATTAGGTGCGCCTGTATTAGTGGACATTCAAGTGGGAATTGCACATGCAGCGTGCACCATGTTTTCCATTATCATTATGTTTTCTTCTACCCCACCACTGTTCTTCTTCTTCTCCATTCTAATTCCCACAATCCCCGCATAATTCATCGCAATCAAAATCAAACTCCATTTTTATAAATTCAAACCAAAATCAAAATCAAACCAAACATTTGCATACCTTTTCTCCACTTCAATGGCTATGGCTATGGCTATGGCTTCCACCTCCAAGCACTTCTTCTTCTTCCTCCTCCTCCTCGTCCTCTCCTCTGCACAAACCGAAGCCAGAGTCAGCAAATTCTTCAGCAAATTCATCCATACTCAAAACAACGAAGTTCCTCAACTCACTCCGACCTCTGATCTTCCGCTACCTCCGTCTCCGGCGCCGGAGATCTCTCCGATCTTCCCGCCGATTGAGGCTCCCGCGCCGTTTTTCGACGAATCGCAGAACGCGTACGGTCTGTACGGCCGAGACGCCGGCGACGGCGAGAGAAGCCGGACGATCACCGACGTGGAGGAGGAGATCCTCGCGGACAACGGCGACGGCGAGGAAAACACCAGATCTGGCTATCCGGATACGAAATTACAGAGTGACGATTTCGGAAGCCCTAGGCGATACGAGCAGAATCAAAACAACTACAAAAACAACAACGGATACAGAAATTCGGAATTCGAGAACAATGAACACAGAAATTCAGAGTACGAGAGCAATTTCGAGAACAACGGCGAGAGAAATTACCAGTACCAGAGCAATTTTGAGAACAACGGCGAGAGAAATTACCAGTACCAGAGCAATTTCGAGAACAACGGCGACGGCTACAGACAGAGGCGATACGAACCGTCGGAGCGGCAGGGGATGAGCGACACCAGATTCGTCGAGAACGGGCGATACTTTCACGATGTTAACTCGAGAAATGGAGAAAATGATCAAGGCGAATCGTTCGGGAATTACAAGAAGAATCAATACGAGTTTGATTCGATGGAGGAGTACGAGAAGAGTGAGGGATTTCTTCCTTGATGCAGAGAGGGGAACTTTTCTAGGGTTTATAGCTTCATCTTGAACCCCTAAATTATGGAGGTTTTTGTGTTTCTGTCCGTTTGTGTTTGTGATTTTGGTGTTTTTTTTTTGTAATCTTTGAGTTGTGATTGTTTTTGCACAACTTGGATTTAGTGTTCTGGGGTTTGAATTTTATACAATGGGAAATTATGTATGCGTTTTGGATTTAAAAAGTGATACAAACAAAAATGATGCTTTCATTTTGGAATTAAATTCCACAATGAGATCATTTTTTAATACAAGAAGGGAAAGGAGGATATAACCTATAATTTCGTGTTATTAGATTATAATTTATGTCGGTAGAAGTTTACTGCTCTTCTCAGTGTGTAGACCAATTTAAGAGTATTAGATTGATGCATTACTCTTGTTTGGTTCAACTACATTATTTAAGTTTAAATATTTATGTAACATTTTATGCGG

Coding sequence (CDS)

ATGGCTATGGCTATGGCTATGGCTTCCACCTCCAAGCACTTCTTCTTCTTCCTCCTCCTCCTCGTCCTCTCCTCTGCACAAACCGAAGCCAGAGTCAGCAAATTCTTCAGCAAATTCATCCATACTCAAAACAACGAAGTTCCTCAACTCACTCCGACCTCTGATCTTCCGCTACCTCCGTCTCCGGCGCCGGAGATCTCTCCGATCTTCCCGCCGATTGAGGCTCCCGCGCCGTTTTTCGACGAATCGCAGAACGCGTACGGTCTGTACGGCCGAGACGCCGGCGACGGCGAGAGAAGCCGGACGATCACCGACGTGGAGGAGGAGATCCTCGCGGACAACGGCGACGGCGAGGAAAACACCAGATCTGGCTATCCGGATACGAAATTACAGAGTGACGATTTCGGAAGCCCTAGGCGATACGAGCAGAATCAAAACAACTACAAAAACAACAACGGATACAGAAATTCGGAATTCGAGAACAATGAACACAGAAATTCAGAGTACGAGAGCAATTTCGAGAACAACGGCGAGAGAAATTACCAGTACCAGAGCAATTTTGAGAACAACGGCGAGAGAAATTACCAGTACCAGAGCAATTTCGAGAACAACGGCGACGGCTACAGACAGAGGCGATACGAACCGTCGGAGCGGCAGGGGATGAGCGACACCAGATTCGTCGAGAACGGGCGATACTTTCACGATGTTAACTCGAGAAATGGAGAAAATGATCAAGGCGAATCGTTCGGGAATTACAAGAAGAATCAATACGAGTTTGATTCGATGGAGGAGTACGAGAAGAGTGAGGGATTTCTTCCTTGA

Protein sequence

MAMAMAMASTSKHFFFFLLLLVLSSAQTEARVSKFFSKFIHTQNNEVPQLTPTSDLPLPPSPAPEISPIFPPIEAPAPFFDESQNAYGLYGRDAGDGERSRTITDVEEEILADNGDGEENTRSGYPDTKLQSDDFGSPRRYEQNQNNYKNNNGYRNSEFENNEHRNSEYESNFENNGERNYQYQSNFENNGERNYQYQSNFENNGDGYRQRRYEPSERQGMSDTRFVENGRYFHDVNSRNGENDQGESFGNYKKNQYEFDSMEEYEKSEGFLP
Homology
BLAST of Sed0016021 vs. NCBI nr
Match: XP_022969172.1 (probable ATP-dependent RNA helicase ddx42 isoform X2 [Cucurbita maxima])

HSP 1 Score: 260.0 bits (663), Expect = 2.3e-65
Identity = 174/289 (60.21%), Postives = 208/289 (71.97%), Query Frame = 0

Query: 3   MAMAMASTSKHFFFFLLLLVLSSAQTEARVSKFFSKFIHTQNNEVPQLTPTSDLPLPPSP 62
           MAMA + T KH  F  LL  LSS Q EARV+KFFSKFIH   + V    P +  P P S 
Sbjct: 1   MAMAASITFKHLPFIFLL--LSSVQIEARVNKFFSKFIHADRDVV---LPVAFSPAPVSV 60

Query: 63  APEISPIFPPIEAPAPFFDESQNAYGLYGRDAGDGERSRTITDVEEEILADNGDGEENTR 122
            PEISP   P  APAPFFDESQNAYGLYG DA D E SRTITDVEEEILA++G+ ++  +
Sbjct: 61  PPEISPSLAPTPAPAPFFDESQNAYGLYGSDADDSESSRTITDVEEEILAEDGEDKKTHK 120

Query: 123 SGYPDTKLQSDDFGSPRRYE-QNQNN-------YKNNNGYRNSEFE-NNEHRNSEYESNF 182
           SGY  T L +D+F SP+RYE +N  N       Y++NN +RNSE+E NNEHRNSEYE+N 
Sbjct: 121 SGY-QTNLHTDNFESPKRYESRNDGNSGYRNSEYESNNDHRNSEYENNNEHRNSEYENNN 180

Query: 183 E---------NNGERNYQYQSNFENNGERNYQYQSNFENNGDGYRQRRYEPSERQGMSDT 242
           E         NN  RN +Y+S+FEN+G RNYQYQSN E  GDGYR+RRYEP+E+QGMSDT
Sbjct: 181 EYRNSEYENNNNEYRNTEYKSDFENSGVRNYQYQSNVE--GDGYRKRRYEPTEQQGMSDT 240

Query: 243 RFVENGRYFHDVNSRNGENDQGESFGNYKKNQYEFDSMEEYEKSEGFLP 274
           RF+ENGRY+H++NS  GE  + +S+G+ KK   EFDSMEEYEKSEGFLP
Sbjct: 241 RFMENGRYYHEINSGIGE--ENKSYGS-KKYPNEFDSMEEYEKSEGFLP 278

BLAST of Sed0016021 vs. NCBI nr
Match: XP_038886989.1 (protein E6-like [Benincasa hispida])

HSP 1 Score: 256.9 bits (655), Expect = 1.9e-64
Identity = 162/274 (59.12%), Postives = 194/274 (70.80%), Query Frame = 0

Query: 5   MAMASTSKHF--FFFLLLLVLSSAQTEARVSKFFSKFIHTQNNEVPQLTPTSDLPLPPSP 64
           MA AST+ +   FFF  +L+LSS Q EARV+KFFSKFI+T    VP   P    P P S 
Sbjct: 1   MAAASTTFNLLSFFFFFILLLSSVQIEARVNKFFSKFINTDREVVPTKLP----PAPVSA 60

Query: 65  APEISPIFPPIEAPAPFFDESQNAYGLYGRDAGDGERSRTITDVEEEILADNG--DGEEN 124
            PEISP   P  APAPFFDESQNAYGLYGRDA   E +RTITDVEEEILA +G  + E+N
Sbjct: 61  PPEISPSLAPTPAPAPFFDESQNAYGLYGRDADADENTRTITDVEEEILAGDGEDEDEDN 120

Query: 125 TRSGYPDTKLQSDDFGSPRRYEQNQNNYKNNNGYRNSEFEN-NEHRNSEYESNFENNGER 184
            ++ YP T  Q+ ++G+        NNY+NNNG+RNSE+EN NE+RNSEYES FENN  R
Sbjct: 121 HKAAYPMTNSQTGNYGN--------NNYENNNGFRNSEYENHNEYRNSEYESAFENNNAR 180

Query: 185 NYQYQSNFENNGERNYQYQSNFENNGDGYRQRRYEPSERQGMSDTRFVENGRYFHDVNSR 244
           NYQYQSNFE+                DGYR+RR+EP+ +QGMSDTRF+ENGRYFHD+NS+
Sbjct: 181 NYQYQSNFED----------------DGYRRRRHEPTRQQGMSDTRFMENGRYFHDINSK 240

Query: 245 NGENDQGESFGNYKKNQYEFDSMEEYEKSEGFLP 274
           NGE  +  S+GN K  +YEFDSMEEYE+SEG LP
Sbjct: 241 NGE--ENGSYGNNKYPKYEFDSMEEYERSEGLLP 244

BLAST of Sed0016021 vs. NCBI nr
Match: KAG7011891.1 (hypothetical protein SDJN02_26798, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 248.4 bits (633), Expect = 6.9e-62
Identity = 179/344 (52.03%), Postives = 212/344 (61.63%), Query Frame = 0

Query: 3   MAMAMASTSKHFFFFLLLLVLSSAQTEARVSKFFSKFIHTQNNEVPQLTPTSDLPLPPSP 62
           MAMA + T KH  F  + L+LSS Q EARV+KFFSKFIHT  + V    P +  P P S 
Sbjct: 1   MAMAASITFKHLPF--IFLILSSVQIEARVNKFFSKFIHTDRDVV---LPVAFSPAPVSV 60

Query: 63  APEISPIFPPIEAPAPFFDESQNAYGLYGRDAGDGERSRTITDVEEEILADNGDGEENTR 122
            PEISP   P  APAPFFDESQNAYGLYG DA D E SRTITDVEEEIL ++G+ EE+ +
Sbjct: 61  PPEISPSLAPTLAPAPFFDESQNAYGLYGSDADDSEGSRTITDVEEEILTEDGEDEESHK 120

Query: 123 SGYPDTKLQSDDFGSPRRYEQN-----------------------QNN-------YKNNN 182
           SGY  T L +D+F SP+R E N                       +NN       Y+NNN
Sbjct: 121 SGY-QTNLHTDNFKSPKRSESNNHGNSGYRNSEYENDNDHRNSEYENNNEHRNSEYENNN 180

Query: 183 GYRNSEFE------------NNEHRNSEYESN------------------FENNGE---- 242
            YRNSE+E            NNEHRNSEYE+N                  +ENN E    
Sbjct: 181 EYRNSEYENNNEHGTSEDENNNEHRNSEYENNNEHKKSEYENNNEHRNSEYENNNEYRNS 240

Query: 243 ---------RNYQYQSNFENNGERNYQYQSNFENNGDGYRQRRYEPSERQGMSDTRFVEN 274
                    RN +Y+S+FENNG RNYQYQSN E  GDGYR+RRYEP+E+QGMSDTRF+EN
Sbjct: 241 EYENNNNEYRNTEYKSDFENNGVRNYQYQSNVE--GDGYRKRRYEPTEQQGMSDTRFMEN 300

BLAST of Sed0016021 vs. NCBI nr
Match: XP_023554545.1 (GATA zinc finger domain-containing protein 14-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 248.1 bits (632), Expect = 9.0e-62
Identity = 180/344 (52.33%), Postives = 211/344 (61.34%), Query Frame = 0

Query: 3   MAMAMASTSKHFFFFLLLLVLSSAQTEARVSKFFSKFIHTQNNEVPQLTPTSDLPLPPSP 62
           MAMA + T KH  F  +  +LSS Q EARV+KFFSKFIHT  + V    P +  P P S 
Sbjct: 1   MAMAASITFKHLPF--IFFILSSVQIEARVNKFFSKFIHTDRDVV---LPVAFSPAPVSV 60

Query: 63  APEISPIFPPIEAPAPFFDESQNAYGLYGRDAGDGERSRTITDVEEEILADNGDGEENTR 122
            PEISP   P  APAPFFDESQNAYGLYG DA D E SRTITDVEEEILA++G+ EE+ +
Sbjct: 61  PPEISPSLAPTLAPAPFFDESQNAYGLYGSDADDSEGSRTITDVEEEILAEDGEDEESHK 120

Query: 123 SGYPDTKLQSDDFGSPRRYEQN-----------------------QNN-------YKNNN 182
           SGY  T L SD+F SP+R E N                       +NN       Y+NNN
Sbjct: 121 SGY-QTNLHSDNFESPKRSESNNDGNSGYRNSEYESNNVHRNSEFENNNEHRNSEYENNN 180

Query: 183 GYRNSEFE------------NNEHRNSEYESN------------------FENNGE---- 242
            YRNSE E            NNEHRNSEYE+N                  +ENN E    
Sbjct: 181 EYRNSEHENNNEHRTSEDENNNEHRNSEYENNNEHKNSEYENNNEHRNSEYENNNEYRNS 240

Query: 243 ---------RNYQYQSNFENNGERNYQYQSNFENNGDGYRQRRYEPSERQGMSDTRFVEN 274
                    RN +Y+S+FENNG RNYQYQSN E  GDGYR+RRYEP+E+QGMSDTRF+EN
Sbjct: 241 EYENNNNEYRNTEYKSDFENNGVRNYQYQSNVE--GDGYRKRRYEPTEQQGMSDTRFMEN 300

BLAST of Sed0016021 vs. NCBI nr
Match: KAG6572262.1 (hypothetical protein SDJN03_28990, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 246.9 bits (629), Expect = 2.0e-61
Identity = 178/344 (51.74%), Postives = 210/344 (61.05%), Query Frame = 0

Query: 3   MAMAMASTSKHFFFFLLLLVLSSAQTEARVSKFFSKFIHTQNNEVPQLTPTSDLPLPPSP 62
           MAMA + T KH  F  + L+LSS Q EARV+KFFSKFIHT  + V    P +  P P S 
Sbjct: 1   MAMAASITFKHLPF--IFLILSSVQIEARVNKFFSKFIHTDRDVV---LPVAFSPAPVSV 60

Query: 63  APEISPIFPPIEAPAPFFDESQNAYGLYGRDAGDGERSRTITDVEEEILADNGDGEENTR 122
            PEISP   P  APAPFFDESQNAYGLYG DA D E SRTITDVEEEIL ++G+ EE+ +
Sbjct: 61  PPEISPSLAPTLAPAPFFDESQNAYGLYGSDADDSEGSRTITDVEEEILTEDGEDEESHK 120

Query: 123 SGYPDTKLQSDDFGSPRRYEQN-----------------------QNN-------YKNNN 182
           SGY  T L +D+F SP+R E N                       +NN       Y+NNN
Sbjct: 121 SGY-QTNLHTDNFESPKRSESNNHGNSGYRNSEYENDNDHRNSEYENNNEHRNSEYENNN 180

Query: 183 GYRNSEFE----------------------------------NNEHRNSEYESNFE---- 242
            YRNSE+E                                  NNEHRNSEYE+N E    
Sbjct: 181 EYRNSEYENNNEHGTSEDENNNEHRTSEYENNNEHKKSEYENNNEHRNSEYENNNEYRNS 240

Query: 243 -----NNGERNYQYQSNFENNGERNYQYQSNFENNGDGYRQRRYEPSERQGMSDTRFVEN 274
                NN  RN +Y+S+FENNG RNYQYQSN E  GDGYR+RRYEP+E+QGMSDTRF+EN
Sbjct: 241 EYENNNNEYRNTEYKSDFENNGVRNYQYQSNVE--GDGYRKRRYEPTEQQGMSDTRFMEN 300

BLAST of Sed0016021 vs. ExPASy TrEMBL
Match: A0A6J1HVL6 (probable ATP-dependent RNA helicase ddx42 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468248 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65
Identity = 174/289 (60.21%), Postives = 208/289 (71.97%), Query Frame = 0

Query: 3   MAMAMASTSKHFFFFLLLLVLSSAQTEARVSKFFSKFIHTQNNEVPQLTPTSDLPLPPSP 62
           MAMA + T KH  F  LL  LSS Q EARV+KFFSKFIH   + V    P +  P P S 
Sbjct: 1   MAMAASITFKHLPFIFLL--LSSVQIEARVNKFFSKFIHADRDVV---LPVAFSPAPVSV 60

Query: 63  APEISPIFPPIEAPAPFFDESQNAYGLYGRDAGDGERSRTITDVEEEILADNGDGEENTR 122
            PEISP   P  APAPFFDESQNAYGLYG DA D E SRTITDVEEEILA++G+ ++  +
Sbjct: 61  PPEISPSLAPTPAPAPFFDESQNAYGLYGSDADDSESSRTITDVEEEILAEDGEDKKTHK 120

Query: 123 SGYPDTKLQSDDFGSPRRYE-QNQNN-------YKNNNGYRNSEFE-NNEHRNSEYESNF 182
           SGY  T L +D+F SP+RYE +N  N       Y++NN +RNSE+E NNEHRNSEYE+N 
Sbjct: 121 SGY-QTNLHTDNFESPKRYESRNDGNSGYRNSEYESNNDHRNSEYENNNEHRNSEYENNN 180

Query: 183 E---------NNGERNYQYQSNFENNGERNYQYQSNFENNGDGYRQRRYEPSERQGMSDT 242
           E         NN  RN +Y+S+FEN+G RNYQYQSN E  GDGYR+RRYEP+E+QGMSDT
Sbjct: 181 EYRNSEYENNNNEYRNTEYKSDFENSGVRNYQYQSNVE--GDGYRKRRYEPTEQQGMSDT 240

Query: 243 RFVENGRYFHDVNSRNGENDQGESFGNYKKNQYEFDSMEEYEKSEGFLP 274
           RF+ENGRY+H++NS  GE  + +S+G+ KK   EFDSMEEYEKSEGFLP
Sbjct: 241 RFMENGRYYHEINSGIGE--ENKSYGS-KKYPNEFDSMEEYEKSEGFLP 278

BLAST of Sed0016021 vs. ExPASy TrEMBL
Match: A0A6J1HX03 (protein E6-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468248 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 4.8e-61
Identity = 177/343 (51.60%), Postives = 210/343 (61.22%), Query Frame = 0

Query: 3   MAMAMASTSKHFFFFLLLLVLSSAQTEARVSKFFSKFIHTQNNEVPQLTPTSDLPLPPSP 62
           MAMA + T KH  F  LL  LSS Q EARV+KFFSKFIH   + V    P +  P P S 
Sbjct: 1   MAMAASITFKHLPFIFLL--LSSVQIEARVNKFFSKFIHADRDVV---LPVAFSPAPVSV 60

Query: 63  APEISPIFPPIEAPAPFFDESQNAYGLYGRDAGDGERSRTITDVEEEILADNGDGEENTR 122
            PEISP   P  APAPFFDESQNAYGLYG DA D E SRTITDVEEEILA++G+ ++  +
Sbjct: 61  PPEISPSLAPTPAPAPFFDESQNAYGLYGSDADDSESSRTITDVEEEILAEDGEDKKTHK 120

Query: 123 SGYPDTKLQSDDFGSPRRYE-------------------------QNQN-----NYKNNN 182
           SGY  T L +D+F SP+RYE                         +N N      Y+NNN
Sbjct: 121 SGY-QTNLHTDNFESPKRYESRNDGNSGYRNSEYESNNDHRNSEYENNNEHRNSEYENNN 180

Query: 183 GYRNSEFE------------NNEHRNSEYESN------------------FENNGE---- 242
            YRNSE+E            NNEHRNSEYE+N                  +ENN E    
Sbjct: 181 EYRNSEYENDNEHRTSEDENNNEHRNSEYENNNEHKNSEYENNNEHRNSEYENNNEYRNS 240

Query: 243 --------RNYQYQSNFENNGERNYQYQSNFENNGDGYRQRRYEPSERQGMSDTRFVENG 274
                   RN +Y+S+FEN+G RNYQYQSN E  GDGYR+RRYEP+E+QGMSDTRF+ENG
Sbjct: 241 EHENNNEYRNTEYKSDFENSGVRNYQYQSNVE--GDGYRKRRYEPTEQQGMSDTRFMENG 300

BLAST of Sed0016021 vs. ExPASy TrEMBL
Match: A0A6J1GLC8 (GATA zinc finger domain-containing protein 14-like OS=Cucurbita moschata OX=3662 GN=LOC111455418 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 3.2e-57
Identity = 179/388 (46.13%), Postives = 213/388 (54.90%), Query Frame = 0

Query: 3   MAMAMASTSKHFFFFLLLLVLSSAQTEARVSKFFSKFIHTQNNEVPQLTPTSDLPLPPSP 62
           MAMA + T KH  F  + L+LSS Q EARV+KFFSKFIHT  + V    P +  P P S 
Sbjct: 1   MAMAASITFKHLPF--IFLILSSVQIEARVNKFFSKFIHTDRDVV---LPVAFSPAPVSV 60

Query: 63  APEISPIFPPIEAPAPFFDESQNAYGLYGRDAGDGERSRTITDVEEEILADNGDGEENTR 122
            PEISP   P  APAPFFDESQNAYGLYG DA + E SRTITDVEEEILA++G+ EE+ +
Sbjct: 61  PPEISPSLAPTPAPAPFFDESQNAYGLYGSDADNSEGSRTITDVEEEILAEDGEDEESHK 120

Query: 123 SGYPDTKLQSDDFGSPRRYEQN-----------------------QNN-------YKNNN 182
           SGY  T L +D+F SP+R E N                       +NN       Y+NNN
Sbjct: 121 SGY-QTNLHTDNFESPKRSESNNDGNSGYRNSEYESNNDHRNSEYENNNEHRNSEYENNN 180

Query: 183 GYRNSEFE---------------------------------------------------- 242
            YRNSE+E                                                    
Sbjct: 181 EYRNSEYENNNEHRTSEDENNNEHRNSEYENNNEHRTSEDENNNEHRNSEYENNNEHRTS 240

Query: 243 ----NNEHRNSEYESN------------------FENNGE-------------RNYQYQS 274
               NNEHRNSEYE+N                  +ENN E             RN +Y+S
Sbjct: 241 EDENNNEHRNSEYENNNEHKNSEYENNNEHRNSEYENNNEYRNSEYENNNNEYRNTEYKS 300

BLAST of Sed0016021 vs. ExPASy TrEMBL
Match: A0A6J1C3G6 (protein E6-like OS=Momordica charantia OX=3673 GN=LOC111007909 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 5.5e-57
Identity = 155/270 (57.41%), Postives = 180/270 (66.67%), Query Frame = 0

Query: 7   MASTSKHF-FFFLLLLVLSSAQTEARVSKFFSKFIHTQNNEVPQLTPTSDLPLPPSPAP- 66
           MAS  KH  FFFLLLL+LSS Q EARV+KFFSKFIHT  N+   LTP   LP+ PSPAP 
Sbjct: 1   MASALKHLPFFFLLLLLLSSVQIEARVNKFFSKFIHTDRNDASPLTPA--LPVAPSPAPL 60

Query: 67  EISPIFPPIEAPAPFFDESQNAYGLYGRDAGDGERSRTITDVEEEILADNGDGEENTRSG 126
              P   PI AP PFF ESQNAYGLYGR + D E + +ITDVEEEILA++G G+E+ +SG
Sbjct: 61  SAPPEISPILAPTPFFYESQNAYGLYGRASDDTENNPSITDVEEEILAEDG-GDESYKSG 120

Query: 127 YPDTKLQSDDFGSPRRYEQNQNNYKNNNGYRNSEFENNEHRNSEYESNFENNGERNYQYQ 186
           YP T     DF S RR EQ Q++Y  NNGY NSE                          
Sbjct: 121 YPKTSFHGTDFESSRRDEQYQSSY-GNNGYGNSE-------------------------- 180

Query: 187 SNFENNGERNYQYQSNFENNGDGYRQRRYEPSERQGMSDTRFVENGRYFHDVNSRNGEND 246
             +ENNG RNYQY+SNFE+   G+R+ RYEP ERQGMSDTRFVENG+Y++D NSR GE  
Sbjct: 181 --YENNGGRNYQYESNFEDG--GFRRSRYEPRERQGMSDTRFVENGKYYYDANSRAGEG- 234

Query: 247 QGESFGNYKK---NQYEFDSMEEYEKSEGF 272
            GES+G+ K    NQ+EFDSMEEYEKSE F
Sbjct: 241 -GESYGSKKNPIPNQFEFDSMEEYEKSEEF 234

BLAST of Sed0016021 vs. ExPASy TrEMBL
Match: A0A5D3DDN1 (Protein E6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00230 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 3.0e-55
Identity = 162/280 (57.86%), Postives = 191/280 (68.21%), Query Frame = 0

Query: 3   MAMAMASTSKHF----FFFLLLLVLSSAQTEARVSKFFSKFIHTQNNEVPQLTPTSDLPL 62
           MA A AST+ +F    FFFLLL  LSS QTEARV+KFFSKFIHT + EV    P +  P 
Sbjct: 1   MAAASASTTFNFNHLSFFFLLL--LSSVQTEARVNKFFSKFIHTDHEEV---VPNTLSPA 60

Query: 63  PPSPAPEISPIFPPIEAPAPFFDESQNAYGLYGRDAGDGERSRTITDVEEEILADNGDGE 122
           P S  PE SP   P  APAPFFDESQNAYGLYG D    E  RTITDVEEEIL   GD +
Sbjct: 61  PLSVPPETSPSLAPTPAPAPFFDESQNAYGLYGSDPDTDENPRTITDVEEEILGGEGDQD 120

Query: 123 E-NTRSGYP-DTKLQSDDFGSPRRYEQNQN-NYKNNNGYRNSEFEN-NEHRNSEYESNFE 182
           E N +S +P +  +Q+ D       EQ QN NY+ NNG+RNSE+EN NE+RNSEYE+N  
Sbjct: 121 ETNRKSEFPMNNFVQTRD-----DEEQYQNKNYEYNNGFRNSEYENHNEYRNSEYENN-- 180

Query: 183 NNGERNYQYQSNFENNGERNYQYQSNFENNGDGYRQRRYEPSERQGMSDTRFVENGRYFH 242
                         NN  RNYQYQSNFE+   GYR+ R+EP+E+QGMSDTRF+ENGRYFH
Sbjct: 181 --------------NNEGRNYQYQSNFEDG--GYRRSRFEPTEQQGMSDTRFMENGRYFH 240

Query: 243 DVNSRNGENDQGESFGNYKK-NQYEFDSMEEYEKSEGFLP 274
           D+NS+N E  +  S+G+ KK  +YEFDSMEEYE+SEG LP
Sbjct: 241 DINSKNDE--ENGSYGSKKKYPKYEFDSMEEYERSEGLLP 250

BLAST of Sed0016021 vs. TAIR 10
Match: AT1G28400.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33850.1); Has 45374 Blast hits to 18870 proteins in 668 species: Archae - 72; Bacteria - 1460; Metazoa - 1191; Fungi - 1038; Plants - 174; Viruses - 64; Other Eukaryotes - 41375 (source: NCBI BLink). )

HSP 1 Score: 56.2 bits (134), Expect = 4.7e-08
Identity = 91/280 (32.50%), Postives = 116/280 (41.43%), Query Frame = 0

Query: 9   STSKHFFFFLLLLVLSSAQTEARVSKFFSKFIHTQNNEVPQ-LTPTSDLPLPPSPAPEIS 68
           ST     FF   LVL S Q  AR S FF KF    + E P+   P S +PL  S    + 
Sbjct: 4   STRGSLLFFFTTLVLLSTQIHARDSYFFGKF----HRESPKDQNPNSFIPLETSEKTTVE 63

Query: 69  PIF---PPIEAPAPFFDESQNAYGLYGRDAGDGERSRTITDVEEEILADNGDGEENTRSG 128
                    E    F  ES N YGLYG               E     +N + EE   + 
Sbjct: 64  ESVLNKKEQEQDPTFVPESGNGYGLYGH--------------ETTYNNNNDNKEEFNNNN 123

Query: 129 YPDTKLQSDDFGSP--RRYEQNQNNYKNN----------NGYRNSEFENNEHRNSEYESN 188
             D K+ S  F +P     E++ NNY+ N           GY N EF NN   N++Y++N
Sbjct: 124 KNDEKVNSKTFSTPSLSETEESFNNYEENYPKKTENYGTKGYNNEEFNNN---NNKYDAN 183

Query: 189 FE-----NNGERNYQYQ--SNFENNGERNYQYQSNF------ENNGDG----YRQRRYEP 241
           F+     N  + NY  +  +N  NN   NY+Y  N       ENN D     Y    Y  
Sbjct: 184 FKEEFNNNKYDENYAKEEFNNNNNNNNYNYKYDENVKEESFPENNEDNKKNVYNSNAYGT 243

BLAST of Sed0016021 vs. TAIR 10
Match: AT1G03820.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 1345 Blast hits to 1122 proteins in 102 species: Archae - 2; Bacteria - 28; Metazoa - 28; Fungi - 30; Plants - 109; Viruses - 0; Other Eukaryotes - 1148 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 2.3e-07
Identity = 77/261 (29.50%), Postives = 107/261 (41.00%), Query Frame = 0

Query: 12  KHFFFFLLLLVLSSAQTEARVSK-FFSKFIHTQNNEVPQLTPTSDLPLPPSPAPEISPIF 71
           K  F F+ +        EAR  K FFSKF H             D+ L P+PAP ++   
Sbjct: 7   KPIFCFIAVFCFIVHNVEAREGKLFFSKFTHIDRPN------NKDVALSPAPAPGLA--- 66

Query: 72  PPIEAPAPFFDESQN-AYGLYGRDAGDGERSRTITDVEEEILADNGDGEENTRSGYPDTK 131
              +A     + S     G+  +       S T TD E E L    D E+NT+       
Sbjct: 67  ---QANGRLGNGSFGPGSGMIPQTKESWPSSSTTTDEEFEKLMATFDEEKNTK------- 126

Query: 132 LQSDDFGSPRRYEQNQNNYKNNNGYRNSEFENNEHRNSEYESNFENNGERNYQYQSNFEN 191
                   P  +E+ +            E E++E  N   +    NN    Y Y +N   
Sbjct: 127 -------LPEAFEEEE------------ESEDSEDLNEPKDKYNNNNNNNGYTYTTN--- 186

Query: 192 NGERNYQYQSNFENNGDGYRQRRYEPSERQGMSDTRFVENGRYFHDVNSRNGENDQGESF 251
                     N+ +NG GY        E+QGMSDTR +ENG+YF+D   RN EN     +
Sbjct: 187 ----------NYNDNGRGYGNE----EEKQGMSDTRVMENGKYFYDTRGRNSENTPSRGY 212

Query: 252 GNYKKNQY--EFDSMEEYEKS 269
            N + N +  EF++MEEY KS
Sbjct: 247 ENARGNDHTNEFETMEEYYKS 212

BLAST of Sed0016021 vs. TAIR 10
Match: AT2G33850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28400.1); Has 3053 Blast hits to 2119 proteins in 133 species: Archae - 6; Bacteria - 52; Metazoa - 135; Fungi - 96; Plants - 73; Viruses - 2; Other Eukaryotes - 2689 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 4.0e-07
Identity = 85/264 (32.20%), Postives = 121/264 (45.83%), Query Frame = 0

Query: 9   STSKHFFFFLLLLVLSSAQTEARVSKFFSKFIHTQNNEVPQLTPTSDLPLPPSPAPEISP 68
           STS   FFFLL LVL S Q  AR S  F KF   Q  +  +  P + +P+  +   E   
Sbjct: 4   STSSCLFFFLLTLVLFSTQISARNSYSFGKF---QREDPKEQNPNNLVPIETNEKKE--- 63

Query: 69  IFPPIEAPAPFFDESQNAYGLYGRDAGDGERSRTITDVEEEILADNGDGEENTRSGYPDT 128
             P  + PA F  +S+N YGLYG +  D                   + EE   + Y D 
Sbjct: 64  --PDDQNPA-FIPQSENGYGLYGHETTD------------------NNNEELNNNKYEDN 123

Query: 129 KLQSDDFGSPRRYE--QNQNNYKNNNGYRNSEFENNE-HRNSEYESNFENNGERNYQYQS 188
               D F +P   E  Q Q +YKN   Y+ S  +  E + N++  S +EN+       + 
Sbjct: 124 VNYDDSFSTPSLSETAQTQESYKN---YKESYPKTTEIYDNNKDTSYYENSNAYGTDKRD 183

Query: 189 NFENNGERNYQYQ--SNFEN-NGDGYRQRRYEPS--------ERQGMSDTRFVENGRYFH 248
           N  N+  + Y  +  S +EN N  G  +R  EP+        ERQGMSDTR++ NG+Y++
Sbjct: 184 NDINDPYKGYSNKDTSYYENPNTYGTEKREKEPAYRGYNNNVERQGMSDTRYMANGKYYY 237

Query: 249 DV-NSRNGENDQGESFGNYKKNQY 258
           D+ + RN        + NYK   Y
Sbjct: 244 DLDDDRNHGRFYQNHYYNYKPTGY 237

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022969172.12.3e-6560.21probable ATP-dependent RNA helicase ddx42 isoform X2 [Cucurbita maxima][more]
XP_038886989.11.9e-6459.12protein E6-like [Benincasa hispida][more]
KAG7011891.16.9e-6252.03hypothetical protein SDJN02_26798, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023554545.19.0e-6252.33GATA zinc finger domain-containing protein 14-like [Cucurbita pepo subsp. pepo][more]
KAG6572262.12.0e-6151.74hypothetical protein SDJN03_28990, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1HVL61.1e-6560.21probable ATP-dependent RNA helicase ddx42 isoform X2 OS=Cucurbita maxima OX=3661... [more]
A0A6J1HX034.8e-6151.60protein E6-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468248 PE=4 SV=1[more]
A0A6J1GLC83.2e-5746.13GATA zinc finger domain-containing protein 14-like OS=Cucurbita moschata OX=3662... [more]
A0A6J1C3G65.5e-5757.41protein E6-like OS=Momordica charantia OX=3673 GN=LOC111007909 PE=4 SV=1[more]
A0A5D3DDN13.0e-5557.86Protein E6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G0023... [more]
Match NameE-valueIdentityDescription
AT1G28400.14.7e-0832.50unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G03820.12.3e-0729.50unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G33850.14.0e-0732.20unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..273
NoneNo IPR availablePANTHERPTHR35274:SF5BNAC05G02100D PROTEINcoord: 7..268
IPR040290Protein E6-likePANTHERPTHR35274E6-LIKE PROTEINcoord: 7..268

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0016021.1Sed0016021.1mRNA