
Sed0015985 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGACCCATCTCTTTGAAGAAGCAACTTTTGGTGATCCTAGTGGTCTCGACCTTTGTGGTGGCTAACTCGATGGAATTGAGCAACTGGGAGGTCAGCATTAAGAATAATTTGACCAATGGACAAAAACTATTCTTGCATTGCAAGTCAAAAGACACTGACTTGGGAGAAAAAACCCTTACCACGGGCTCCGAATTCAAGTGGAAATTCAAAGTGAACATTTGGGGTACGACCTTGTATTGGTGCACTGTGCGAAAGCCAAATGGGTATCAAGCGAAATTCGATGCTTTCTGGGTCGAGAAGAAGACCAGGTGGTTGCGCGTCAAATGCGACAATCATATTTGTAATTGGATTGTGCAAGACAGTGGAGTTTACCTCAAAGATAACAGTGAAAACACAAAAGAGCTAATTCATAATTACTGGAAACTCATACAAGTAGTTAATGGATCAAAGACTGTTTGA ATGGGACCCATCTCTTTGAAGAAGCAACTTTTGGTGATCCTAGTGGTCTCGACCTTTGTGGTGGCTAACTCGATGGAATTGAGCAACTGGGAGGTCAGCATTAAGAATAATTTGACCAATGGACAAAAACTATTCTTGCATTGCAAGTCAAAAGACACTGACTTGGGAGAAAAAACCCTTACCACGGGCTCCGAATTCAAGTGGAAATTCAAAGTGAACATTTGGGGTACGACCTTGTATTGGTGCACTGTGCGAAAGCCAAATGGGTATCAAGCGAAATTCGATGCTTTCTGGGTCGAGAAGAAGACCAGGTGGTTGCGCGTCAAATGCGACAATCATATTTGTAATTGGATTGTGCAAGACAGTGGAGTTTACCTCAAAGATAACAGTGAAAACACAAAAGAGCTAATTCATAATTACTGGAAACTCATACAAGTAGTTAATGGATCAAAGACTGTTTGA ATGGGACCCATCTCTTTGAAGAAGCAACTTTTGGTGATCCTAGTGGTCTCGACCTTTGTGGTGGCTAACTCGATGGAATTGAGCAACTGGGAGGTCAGCATTAAGAATAATTTGACCAATGGACAAAAACTATTCTTGCATTGCAAGTCAAAAGACACTGACTTGGGAGAAAAAACCCTTACCACGGGCTCCGAATTCAAGTGGAAATTCAAAGTGAACATTTGGGGTACGACCTTGTATTGGTGCACTGTGCGAAAGCCAAATGGGTATCAAGCGAAATTCGATGCTTTCTGGGTCGAGAAGAAGACCAGGTGGTTGCGCGTCAAATGCGACAATCATATTTGTAATTGGATTGTGCAAGACAGTGGAGTTTACCTCAAAGATAACAGTGAAAACACAAAAGAGCTAATTCATAATTACTGGAAACTCATACAAGTAGTTAATGGATCAAAGACTGTTTGA MGPISLKKQLLVILVVSTFVVANSMELSNWEVSIKNNLTNGQKLFLHCKSKDTDLGEKTLTTGSEFKWKFKVNIWGTTLYWCTVRKPNGYQAKFDAFWVEKKTRWLRVKCDNHICNWIVQDSGVYLKDNSENTKELIHNYWKLIQVVNGSKTV Homology
BLAST of Sed0015985 vs. NCBI nr
Match: XP_008458036.1 (PREDICTED: pumilio homolog 15-like [Cucumis melo] >KAA0026186.1 pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK30772.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]) HSP 1 Score: 220.3 bits (560), Expect = 1.1e-53 Identity = 99/142 (69.72%), Postives = 118/142 (83.10%), Query Frame = 0
BLAST of Sed0015985 vs. NCBI nr
Match: XP_011659760.2 (S-protein homolog 74-like [Cucumis sativus] >KAE8646233.1 hypothetical protein Csa_015674 [Cucumis sativus]) HSP 1 Score: 216.9 bits (551), Expect = 1.3e-52 Identity = 98/142 (69.01%), Postives = 116/142 (81.69%), Query Frame = 0
BLAST of Sed0015985 vs. NCBI nr
Match: XP_004139670.2 (S-protein homolog 74 [Cucumis sativus] >KGN44564.1 hypothetical protein Csa_016204 [Cucumis sativus]) HSP 1 Score: 213.4 bits (542), Expect = 1.4e-51 Identity = 97/142 (68.31%), Postives = 114/142 (80.28%), Query Frame = 0
BLAST of Sed0015985 vs. NCBI nr
Match: XP_022960229.1 (S-protein homolog 74-like [Cucurbita moschata]) HSP 1 Score: 209.5 bits (532), Expect = 2.0e-50 Identity = 92/142 (64.79%), Postives = 109/142 (76.76%), Query Frame = 0
BLAST of Sed0015985 vs. NCBI nr
Match: XP_023515021.1 (S-protein homolog 74-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 208.8 bits (530), Expect = 3.4e-50 Identity = 92/142 (64.79%), Postives = 108/142 (76.06%), Query Frame = 0
BLAST of Sed0015985 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 9.7e-16 Identity = 41/118 (34.75%), Postives = 67/118 (56.78%), Query Frame = 0
BLAST of Sed0015985 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 9.7e-16 Identity = 42/117 (35.90%), Postives = 66/117 (56.41%), Query Frame = 0
BLAST of Sed0015985 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.0e-09 Identity = 40/141 (28.37%), Postives = 62/141 (43.97%), Query Frame = 0
BLAST of Sed0015985 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 5.2e-09 Identity = 43/143 (30.07%), Postives = 69/143 (48.25%), Query Frame = 0
BLAST of Sed0015985 vs. ExPASy Swiss-Prot
Match: Q40975 (Self-incompatibility protein S1 OS=Papaver rhoeas OX=33128 GN=S1 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08 Identity = 37/127 (29.13%), Postives = 67/127 (52.76%), Query Frame = 0
BLAST of Sed0015985 vs. ExPASy TrEMBL
Match: A0A5D3E4D8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G001170 PE=3 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 5.5e-54 Identity = 99/142 (69.72%), Postives = 118/142 (83.10%), Query Frame = 0
BLAST of Sed0015985 vs. ExPASy TrEMBL
Match: A0A1S3C711 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103497573 PE=3 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 5.5e-54 Identity = 99/142 (69.72%), Postives = 118/142 (83.10%), Query Frame = 0
BLAST of Sed0015985 vs. ExPASy TrEMBL
Match: A0A0A0K6N8 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_7G336430 PE=3 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 6.7e-52 Identity = 97/142 (68.31%), Postives = 114/142 (80.28%), Query Frame = 0
BLAST of Sed0015985 vs. ExPASy TrEMBL
Match: A0A6J1HAC3 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111461031 PE=3 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 9.7e-51 Identity = 92/142 (64.79%), Postives = 109/142 (76.76%), Query Frame = 0
BLAST of Sed0015985 vs. ExPASy TrEMBL
Match: A0A6J1KS80 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111498179 PE=3 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 2.4e-49 Identity = 88/142 (61.97%), Postives = 110/142 (77.46%), Query Frame = 0
BLAST of Sed0015985 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 84.7 bits (208), Expect = 6.9e-17 Identity = 41/118 (34.75%), Postives = 67/118 (56.78%), Query Frame = 0
BLAST of Sed0015985 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 84.7 bits (208), Expect = 6.9e-17 Identity = 42/117 (35.90%), Postives = 66/117 (56.41%), Query Frame = 0
BLAST of Sed0015985 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 64.7 bits (156), Expect = 7.4e-11 Identity = 40/141 (28.37%), Postives = 62/141 (43.97%), Query Frame = 0
BLAST of Sed0015985 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 64.3 bits (155), Expect = 9.7e-11 Identity = 33/104 (31.73%), Postives = 55/104 (52.88%), Query Frame = 0
BLAST of Sed0015985 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 62.4 bits (150), Expect = 3.7e-10 Identity = 43/143 (30.07%), Postives = 69/143 (48.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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