
Sed0015961 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACACACACACTTTCAAAGTTAATTAAAAACCAAAGTTAAACATGGAACCTCACTCTTCCTCCTTTTCTTTTTACTACTCCGAGCCGCCAGCCATGCCCCTAAAAAAGGGCGTGGCGCCGCCGTCGCGGGCACAGCCTCGGGTTTACAAGGTCGACCCCGTCGACTTTCGGGATGTTGTTCAGAAGCTTACTGCTCCACCAGAGTTTCTTGATCCCCGCCTCCATGCCATGCCGCCCCCTCGCCCCAATTTCTCCGATCCGCCGCCAAGGTCTTCCGGCCGCCGGAATTTTTCCGACGAGCGGTCGGTTTCTTATAATGCCTACTTTGGAGACTACTCTTGAAAGATGCTTGTATATTGTTGTTCTTTTGGTTTGTTTTTTTTCCTTAGCTTTCACATTGGGAATAATTTTCATTGAATTATGTTTCGTTAAAAAATTATTAAATTTCATGGATTTGCTATGACAATTTACAATATTTAATAAAGTAATTAACTTGGACAAACTATTTTCATGCTTAAATAAATTTACTGGTCTTCTTTCCATTTTTTTTTTCATTTTTTACTTAGTTTAATCTTTTATAACTACACATAGAATTAGATTTTCACCCTGAAATCGAATGGATTGATGGATCAATTGGTTATCTGGTTTGTTGATTCCCAGAATCCATATTTGTAATCTACTTTCTCCATCTTGTACTAAAAAAAGATTTTCACCTAGAGCATCGGTGTTCATCTCAAAATTCATGGCATAATAATAGATTCTATAATCAACCCTCACTTATACATTTTAAATTTGAAAATTTCAAAAAAAAGTATAATACGAAGATCTCAGGTCTCTATCAACGAGCTATTCTCGAAGACATTGAATTTTCTCTGTGTTTCTCCTAGCTCATTCAGATTTCAATGTTGTAATTTGT ACACACACACTTTCAAAGTTAATTAAAAACCAAAGTTAAACATGGAACCTCACTCTTCCTCCTTTTCTTTTTACTACTCCGAGCCGCCAGCCATGCCCCTAAAAAAGGGCGTGGCGCCGCCGTCGCGGGCACAGCCTCGGGTTTACAAGGTCGACCCCGTCGACTTTCGGGATGTTGTTCAGAAGCTTACTGCTCCACCAGAGTTTCTTGATCCCCGCCTCCATGCCATGCCGCCCCCTCGCCCCAATTTCTCCGATCCGCCGCCAAGGTCTTCCGGCCGCCGGAATTTTTCCGACGAGCGGTCGGTTTCTTATAATGCCTACTTTGGAGACTACTCTTGAAAGATGCTTGTATATTGTTGTTCTTTTGGTTTGTTTTTTTTCCTTAGCTTTCACATTGGGAATAATTTTCATTGAATTATGTTTCGTTAAAAAATTATTAAATTTCATGGATTTGCTATGACAATTTACAATATTTAATAAAGTAATTAACTTGGACAAACTATTTTCATGCTTAAATAAATTTACTGGTCTTCTTTCCATTTTTTTTTTCATTTTTTACTTAGTTTAATCTTTTATAACTACACATAGAATTAGATTTTCACCCTGAAATCGAATGGATTGATGGATCAATTGGTTATCTGGTTTGTTGATTCCCAGAATCCATATTTGTAATCTACTTTCTCCATCTTGTACTAAAAAAAGATTTTCACCTAGAGCATCGGTGTTCATCTCAAAATTCATGGCATAATAATAGATTCTATAATCAACCCTCACTTATACATTTTAAATTTGAAAATTTCAAAAAAAAGTATAATACGAAGATCTCAGGTCTCTATCAACGAGCTATTCTCGAAGACATTGAATTTTCTCTGTGTTTCTCCTAGCTCATTCAGATTTCAATGTTGTAATTTGT ATGGAACCTCACTCTTCCTCCTTTTCTTTTTACTACTCCGAGCCGCCAGCCATGCCCCTAAAAAAGGGCGTGGCGCCGCCGTCGCGGGCACAGCCTCGGGTTTACAAGGTCGACCCCGTCGACTTTCGGGATGTTGTTCAGAAGCTTACTGCTCCACCAGAGTTTCTTGATCCCCGCCTCCATGCCATGCCGCCCCCTCGCCCCAATTTCTCCGATCCGCCGCCAAGGTCTTCCGGCCGCCGGAATTTTTCCGACGAGCGGTCGGTTTCTTATAATGCCTACTTTGGAGACTACTCTTGA MEPHSSSFSFYYSEPPAMPLKKGVAPPSRAQPRVYKVDPVDFRDVVQKLTAPPEFLDPRLHAMPPPRPNFSDPPPRSSGRRNFSDERSVSYNAYFGDYS Homology
BLAST of Sed0015961 vs. NCBI nr
Match: KAG6605217.1 (hypothetical protein SDJN03_02534, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 107.1 bits (266), Expect = 9.0e-20 Identity = 58/91 (63.74%), Postives = 66/91 (72.53%), Query Frame = 0
BLAST of Sed0015961 vs. NCBI nr
Match: KAA0045761.1 (VQ motif-containing protein 29 [Cucumis melo var. makuwa] >TYJ99521.1 VQ motif-containing protein 29 [Cucumis melo var. makuwa]) HSP 1 Score: 93.6 bits (231), Expect = 1.0e-15 Identity = 54/98 (55.10%), Postives = 63/98 (64.29%), Query Frame = 0
BLAST of Sed0015961 vs. NCBI nr
Match: XP_022149539.1 (VQ motif-containing protein 29 [Momordica charantia]) HSP 1 Score: 89.0 bits (219), Expect = 2.5e-14 Identity = 53/96 (55.21%), Postives = 61/96 (63.54%), Query Frame = 0
BLAST of Sed0015961 vs. NCBI nr
Match: KAE8651906.1 (hypothetical protein Csa_006780 [Cucumis sativus]) HSP 1 Score: 88.6 bits (218), Expect = 3.3e-14 Identity = 52/89 (58.43%), Postives = 62/89 (69.66%), Query Frame = 0
BLAST of Sed0015961 vs. NCBI nr
Match: XP_028052843.1 (formin-like protein 13 [Camellia sinensis] >THG22069.1 hypothetical protein TEA_026033 [Camellia sinensis var. sinensis]) HSP 1 Score: 64.7 bits (156), Expect = 5.1e-07 Identity = 36/74 (48.65%), Postives = 45/74 (60.81%), Query Frame = 0
BLAST of Sed0015961 vs. ExPASy TrEMBL
Match: A0A5A7TW54 (VQ motif-containing protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00880 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 5.0e-16 Identity = 54/98 (55.10%), Postives = 63/98 (64.29%), Query Frame = 0
BLAST of Sed0015961 vs. ExPASy TrEMBL
Match: A0A6J1D7B4 (VQ motif-containing protein 29 OS=Momordica charantia OX=3673 GN=LOC111017949 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.2e-14 Identity = 53/96 (55.21%), Postives = 61/96 (63.54%), Query Frame = 0
BLAST of Sed0015961 vs. ExPASy TrEMBL
Match: A0A0A0LPS3 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G271490 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 2.2e-11 Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 0
BLAST of Sed0015961 vs. ExPASy TrEMBL
Match: A0A4S4EYD7 (VQ domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_026033 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.5e-07 Identity = 36/74 (48.65%), Postives = 45/74 (60.81%), Query Frame = 0
BLAST of Sed0015961 vs. ExPASy TrEMBL
Match: A0A2N9FPV7 (VQ domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20638 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.2e-06 Identity = 32/62 (51.61%), Postives = 41/62 (66.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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