Sed0015960 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAAGCTGGCGGATCGAGTTCGCCTGCGCGCCGAGCTGCGTTCAAATCTCAACTCTGAAACCTAATAATGGCCGACGGCGCAGAATCAACCTGGCCGCCGGCCGCCATGGGCGTCACACTGGCGATCATCTCCGCCTCCGCTATCATATCTCGTAAAACCTCGAAACTTTTCAAGATCCTCGAACTCATCTCTCTCAATTTCTCTCATGTGAAGTTTTGCGTTTTTTCTCAGTGTATGTAGCGACGAGGAGATCGAGAGCGTTGGATTCCAAGGTACGAGAGCTCGAGGCATCTCTGACAGCTTCGTCAAAGAACACCGCCGCCGAGCGAAAAGGCCGAATTCGGGCTCAGCAGGTATTTCATTATCTCCTCCTCTCCATGGCTTCATGTTCCAATGCTATTAACACTGTTTTTAAAAAGCTCCCACTAGAGGCCTCTCACGCTCAAAAAGGTTCCGGGCTCAATGTTGGCGGATAAAAAATCCCATGAAAGGCTTGCCAGTCCGGTGCCTTGTGGGGTTTTACTAGGTTTTCTCTATTTATTTTGTAAATTTCAAATTCAGTCATCAATTGCTTTGAAGTTCTATTTAATAAAAACAATTAAAACTTAATTGTCAGTCTTAATTACCAATCCACATCTTTGTTCTCTCTACCTATTGTTAATGAAGGGTCCCCAAGGAGTAGCACAGTGGTTGAAGACTTGGACTTTGAGGGTATCCTCCCCTCAAGATCCTAGGTTCGAGACTCAGCTGTGACATTACTCCTTCGATGTCTCCCAGTGCCCGGCCTAGGGACAAGCATGGGTACCCTTGTTTCAAAAAAAAAAAAATGTTAATGAAGGAGTGGATGGGATGAATATGCATTTAGCTACCATAAATTGATCTTTAGGATTTTAAATTTTTATTTGGGATTAATGTTTGAATGTTTCTTGTTTTTTTTGAAACAAGGGTAATCACATCCGTCAAAGCACTGGATACATCGAAGGAATAATGTTTCATGTTTTTTTATGGAGGGACTATATAAACAAATTTATATTGAAAGAGATTAATATATATATTTGTATGTATACATGTATATATTCTGATAAAAAAAAGGTCATTGAGCTTTAGTGAGCTTGAGCCTTTTAAGACACTGGCTATTCATGATAGTTTGATTACTTATTTCTCCATATTTGTAGGCTTTAAGGCAAGCACTTGCGGAACCGAAGTCTGATAGCGTGGAGTGCACTTCATACCCTATGACACCAATTGGTGTCATACACTCATCCTTCTCTACTAGGTTAGTTTAAGCTTGCATTATCCGGCAGTCCAGTGTTTTAAAAGGCGTGCTTGGGCTCAAGTCCCACCTTTTGCGTCTCGCATGTCCCAGGCGAGGCGCGTGTAATAAGGCGCACTCCTTATGGCGCCTTACGTGAAGCCCTGGGCGCCAAAAGACGCGCGCCTCGTGGGCTTTTTTATTTTCCTTTGCATTTTTTGTATTTCAGTTCCCCGTACTAGGTCATTTGAAGCGCGTGAAGGTTGTTAGTTGAATATTATGTATGTTTTATATATTATTCTTGGTTAAAACTTCATTTATGTCCATGTAAAGTGTTTTTATTGTGTATACACACGTATATATAAATATTTTGTGTTGTTTTATATAGTGCGCCTTAAGTAAAAAAGTCCTCGCCTTTTGCCTTTTGGTGTGCCTCAGGCTCTCGAGGGTCATTTCACCTTAGTGTGCCTTGCGCTTTTTAAAACACTGCAGCAGTCTAACATCAATTTTTGAATTGTTGTTTAGTTTTCTCGTTGTTCTGTTTGAACACCAATTATAAAATAATATGGGATTCCATTTCAAAACAAATTGTTGATGATGAGAGTAGCCCACATATTTTATAAAAATGTTGAGAACTCTTCACCTTTTCAATGCGAGAATCTCCAACATACTCCTTAAGATGGTGGGAACACCATCTTTTATTAGCTTCGAATTTGTGGATCAATACCCGCTTAGAATTTAATCGTTTAGGTTGGATCTAAATTTTTGGATCAAATACCTACTTAGGTTGGATTTCGAATTTATGGACCAAATAATCACTTGGAACTCTGATTTCATATTAGATTACATGGGGTTTCATCTCAAAACCAATTGATGATGATAGGAGTAGTTCACATATCTTATAAAGATGCTGAGAACTCCTTATCTTTTCAAATGTGGGACAAGGTGAGGATCTCCAACATAAATAGATATGTTTCAGCCTTGTTCTTTGTTAGGTATAGAAGTGGAACAATCAACGACTTTTGTTGGGTTATTTTAGGAATGGGACTCCAAGGCAATCTTTAGTAGTACCCCTTGCGAGGGCACGACTGGTGTTATCATCTCGTATCCCTCCAGCTTCCATTGAAGGTCTTGGAGAATATTCCCATTGCTGGATTATATATGTCTTTCATTTAAATACAAATCTTGAGAAGTCGTGGAAGGATCCTAGATCAAAATTCAAGGCAAAAGTACGTTTCTTCATCTGTTGATGCTCCTTAAAAATGGAATTCATAGTTTTATTATTTTTATAGTTTCTTAAAATCCTATAAAAGAACAGCTCATTGATAGGTTAAAGTACCGAGGTTGAAAGGCGCAAAGCTAGGAGTCTTTGCTACTAGATCTCCACATAGACCATGCCCAATCGGACTCACCATTGCAAAGGTAAGATATAAATTTCAATTGTTTTCAATGTATTATTGCAAGTTGAGGCAGACGCCACATACATTCATATAAATGTCACCCCCAACAAATTTTACCCACTTGACCAGATTGACATGGTCCAATCACACCAATGATTTTTCTACGGTTTTGCCTTTTTCATTGTCATTTACTATTATAAATCTATAGCTACAAGCTTAGGGGGTGTTTAGGGCCCGGGGCATAGAGGACGAGAATGATTATGGGTGGAATCGTTTTATTTGCCTTGTTTGGGCGAATAAGAATCATTTCTTCAAAAATACTTTTTATTCTATTCAAACCACTTTTCATTCTTATGGTACTCGTACTCACTATTTTATTCTCTCTATAACTTTTTTCTTCACCCTTAATATAAGTAATGGTTTCTCCCATAATCATTTTCTTTCCCTCAGACACATAATTATTCTATCTCATATTCTCCTCCTAATTCTTATTCTTCCCATAATCATTCTCATTCTCTTGCCCTAAACACCCCCAGGCCCCATAAAGTTGTACTGTTAGATAACATTCAATGAAATATATAAATGGGGGATTCTTAAATCTAAGACTAAGAAATCTGCTATGTTACCACTTTAGGTGGAGGCTATACAGGGACATCAAATTGTACTCTCTGGTGCCGATCTTGTTGATGGAACTGTTAGTGTTTTTGTCTCTCTTTTTTTTTCCCAATCAGCAGTGTAAGAGATTTAACTTGAAATTAATCATTACTTTTTGTGATCATGATTGTTATGATTTTTTTCTCTGTTTGAATTTTGTTTCAGCCAGTACTTGATGTTAAACCTTATCTACCATACTGTGACAGTCTCCAAGATGCAAAAGTTCCAGAGTGGATAATGGTATTTGTTCAATATTTCTATTAGAATCTCTTTGATGTTTATTATTACCCTGTTCACCCTTTCAATTATTTTTCATGTAGTATTTTTTAACTACTCATTTTCCTGTCTCAACTTAGATTTATTTTGTTTTCAAATTTTAAAATGCGGAAAATCTCTAATATTCTTTGCATGCCATTTAACTAGTTGCGTGCAAATAACTTAAGAAATTTAGCTTTCTATATATGATGCTGTTTTTTTCTTTATAGTTGAACTTATCTATACTCTATGATCATGTAATATGTATTATACATTCTTCGTGGCAATCTGACATCTTATATTACGCAAACCCAGGGGGAAAATTTGTTGAGCGTTGCATCTATTTGCTACTCTGAAGAATTTACTTCCACTTTAATGGAATGTTGGCCACTAATGGTGAGTTTTGTTTTGTTTCTTTTTTCTCTCTTTATTTCTATTTAAAAGTGGTTCTGTTCTTTTTCATCTCTGATTTGAAGTTTAGCTTGTTCATGCAATATGCCAAAAATATTCACTATTTCTTTTGCACACGAAAGTAATAAACAGTTTTTTTTTAAACAAGGGTAAACATGTCCGTCCCTTGGCCAGGCACCGGGAGACATCGAAAGAATAATGTCACAACTGAGTCTCGAACCTGGGACCTTGAGGGGAGTATACCCTCAAAGCCTAAGTCTTCGACCACTGTGCCACCCCTTGAGGACAGGAAAGTAATAAACAGTAAACAACAATATTCTACCTAGCACTTCTAAGTTCCAAACTATTATATTTATGGCCTATGGAACGTCCTTACTGTTTAGTGCTTTGAGTTTGGGTGATAATTTGAGTTTGGTTGGAACCTCAAATTTAAAGTTTGATTAATAAAAGTGATAATTATTGTTGTCTCCCGGTGATGTTGTTTCACGCAAACTCTAAATGCATATGAACATTGATCTGGTTAATTTCTTATTCTTTTACTCCATTATAGTACTTTAAAGAGCTGCTTTGAAATTCGATTATCATTTTTCTAACTCCACATTACAAAGTTCTAGTGCTCTCAATTTTCATACTGTAAAAAGCTGGATATTCCGTGTCAAGTATGTAGGATCCCGTCCTTGCTACATAAATTTCACTTGTTATCATATTTTTGTTGTTTCAGGAAAAGGAATCACTTTATGAATCGGCAGATGAGTTGAAAAAGTTTGTGAAGCAGGTGCTTTCATGGGATATTCGATCATTGTCTCAACGTAGTCGACCTCACGACTCCCACATTACGACAACAACAGGGCATGAATTGTCCGATGGAAGTTCAGATTCAGATGGTCACCTAGATGACCAAGTTTCAAGTGGTACCCAAGTTTCTTCTAAGAACATTATCTATCACTTACTTGTAGATGGATTAGATGTGTCGTATACGATCGATTGCCATGGTGACGTGGTTGTGGGCAGAGTAGCACTCTCATCACCAAGCTCAAGAACAAGAAGTGATCGACACAAACCCAACTCTTCTGGATAGGCAAATCAAGGTAACTTAGTCTTTGTATTGTACTAACTTTGCACCACAGTTAAAAGAACCTCTATGTAGGGAATTTTCACCCAAAAATACTATTCTGCCTTACATGGAGCTCGATATGCTTACATTCCTGTTCTCTTGAAAAAAGCTGTATGGTTTGAGTCTGGGACTATAATTCTG TGAAGCTGGCGGATCGAGTTCGCCTGCGCGCCGAGCTGCGTTCAAATCTCAACTCTGAAACCTAATAATGGCCGACGGCGCAGAATCAACCTGGCCGCCGGCCGCCATGGGCGTCACACTGGCGATCATCTCCGCCTCCGCTATCATATCTCTGTATGTAGCGACGAGGAGATCGAGAGCGTTGGATTCCAAGGTACGAGAGCTCGAGGCATCTCTGACAGCTTCGTCAAAGAACACCGCCGCCGAGCGAAAAGGCCGAATTCGGGCTCAGCAGGCTTTAAGGCAAGCACTTGCGGAACCGAAGTCTGATAGCGTGGAGTGCACTTCATACCCTATGACACCAATTGGTGTCATACACTCATCCTTCTCTACTAGGAATGGGACTCCAAGGCAATCTTTAGTAGTACCCCTTGCGAGGGCACGACTGGTGTTATCATCTCGTATCCCTCCAGCTTCCATTGAAGGTCTTGGAGAATATTCCCATTGCTGGATTATATATGTCTTTCATTTAAATACAAATCTTGAGAAGTCGTGGAAGGATCCTAGATCAAAATTCAAGGCAAAAGTTAAAGTACCGAGGTTGAAAGGCGCAAAGCTAGGAGTCTTTGCTACTAGATCTCCACATAGACCATGCCCAATCGGACTCACCATTGCAAAGGTGGAGGCTATACAGGGACATCAAATTGTACTCTCTGGTGCCGATCTTGTTGATGGAACTCCAGTACTTGATGTTAAACCTTATCTACCATACTGTGACAGTCTCCAAGATGCAAAAGTTCCAGAGTGGATAATGGGGGAAAATTTGTTGAGCGTTGCATCTATTTGCTACTCTGAAGAATTTACTTCCACTTTAATGGAATGTTGGCCACTAATGGAAAAGGAATCACTTTATGAATCGGCAGATGAGTTGAAAAAGTTTGTGAAGCAGGTGCTTTCATGGGATATTCGATCATTGTCTCAACGTAGTCGACCTCACGACTCCCACATTACGACAACAACAGGGCATGAATTGTCCGATGGAAGTTCAGATTCAGATGGTCACCTAGATGACCAAGTTTCAAGTGGTACCCAAGTTTCTTCTAAGAACATTATCTATCACTTACTTGTAGATGGATTAGATGTGTCGTATACGATCGATTGCCATGGTGACGTGGTTGTGGGCAGAGTAGCACTCTCATCACCAAGCTCAAGAACAAGAAGTGATCGACACAAACCCAACTCTTCTGGATAGGCAAATCAAGGTAACTTAGTCTTTGTATTGTACTAACTTTGCACCACAGTTAAAAGAACCTCTATGTAGGGAATTTTCACCCAAAAATACTATTCTGCCTTACATGGAGCTCGATATGCTTACATTCCTGTTCTCTTGAAAAAAGCTGTATGGTTTGAGTCTGGGACTATAATTCTG ATGGCCGACGGCGCAGAATCAACCTGGCCGCCGGCCGCCATGGGCGTCACACTGGCGATCATCTCCGCCTCCGCTATCATATCTCTGTATGTAGCGACGAGGAGATCGAGAGCGTTGGATTCCAAGGTACGAGAGCTCGAGGCATCTCTGACAGCTTCGTCAAAGAACACCGCCGCCGAGCGAAAAGGCCGAATTCGGGCTCAGCAGGCTTTAAGGCAAGCACTTGCGGAACCGAAGTCTGATAGCGTGGAGTGCACTTCATACCCTATGACACCAATTGGTGTCATACACTCATCCTTCTCTACTAGGAATGGGACTCCAAGGCAATCTTTAGTAGTACCCCTTGCGAGGGCACGACTGGTGTTATCATCTCGTATCCCTCCAGCTTCCATTGAAGGTCTTGGAGAATATTCCCATTGCTGGATTATATATGTCTTTCATTTAAATACAAATCTTGAGAAGTCGTGGAAGGATCCTAGATCAAAATTCAAGGCAAAAGTTAAAGTACCGAGGTTGAAAGGCGCAAAGCTAGGAGTCTTTGCTACTAGATCTCCACATAGACCATGCCCAATCGGACTCACCATTGCAAAGGTGGAGGCTATACAGGGACATCAAATTGTACTCTCTGGTGCCGATCTTGTTGATGGAACTCCAGTACTTGATGTTAAACCTTATCTACCATACTGTGACAGTCTCCAAGATGCAAAAGTTCCAGAGTGGATAATGGGGGAAAATTTGTTGAGCGTTGCATCTATTTGCTACTCTGAAGAATTTACTTCCACTTTAATGGAATGTTGGCCACTAATGGAAAAGGAATCACTTTATGAATCGGCAGATGAGTTGAAAAAGTTTGTGAAGCAGGTGCTTTCATGGGATATTCGATCATTGTCTCAACGTAGTCGACCTCACGACTCCCACATTACGACAACAACAGGGCATGAATTGTCCGATGGAAGTTCAGATTCAGATGGTCACCTAGATGACCAAGTTTCAAGTGGTACCCAAGTTTCTTCTAAGAACATTATCTATCACTTACTTGTAGATGGATTAGATGTGTCGTATACGATCGATTGCCATGGTGACGTGGTTGTGGGCAGAGTAGCACTCTCATCACCAAGCTCAAGAACAAGAAGTGATCGACACAAACCCAACTCTTCTGGATAG MADGAESTWPPAAMGVTLAIISASAIISLYVATRRSRALDSKVRELEASLTASSKNTAAERKGRIRAQQALRQALAEPKSDSVECTSYPMTPIGVIHSSFSTRNGTPRQSLVVPLARARLVLSSRIPPASIEGLGEYSHCWIIYVFHLNTNLEKSWKDPRSKFKAKVKVPRLKGAKLGVFATRSPHRPCPIGLTIAKVEAIQGHQIVLSGADLVDGTPVLDVKPYLPYCDSLQDAKVPEWIMGENLLSVASICYSEEFTSTLMECWPLMEKESLYESADELKKFVKQVLSWDIRSLSQRSRPHDSHITTTTGHELSDGSSDSDGHLDDQVSSGTQVSSKNIIYHLLVDGLDVSYTIDCHGDVVVGRVALSSPSSRTRSDRHKPNSSG Homology
BLAST of Sed0015960 vs. NCBI nr
Match: XP_022134721.1 (uncharacterized protein LOC111006924 [Momordica charantia]) HSP 1 Score: 617.1 bits (1590), Expect = 1.0e-172 Identity = 312/380 (82.11%), Postives = 345/380 (90.79%), Query Frame = 0
BLAST of Sed0015960 vs. NCBI nr
Match: XP_038879626.1 (tRNA (adenine(37)-N6)-methyltransferase isoform X1 [Benincasa hispida]) HSP 1 Score: 611.3 bits (1575), Expect = 5.8e-171 Identity = 305/380 (80.26%), Postives = 346/380 (91.05%), Query Frame = 0
BLAST of Sed0015960 vs. NCBI nr
Match: KAG7023410.1 (tRNA (adenine(37)-N6)-methyltransferase [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 590.5 bits (1521), Expect = 1.1e-164 Identity = 301/375 (80.27%), Postives = 335/375 (89.33%), Query Frame = 0
BLAST of Sed0015960 vs. NCBI nr
Match: XP_022965024.1 (uncharacterized protein LOC111464972 [Cucurbita moschata]) HSP 1 Score: 590.1 bits (1520), Expect = 1.4e-164 Identity = 301/375 (80.27%), Postives = 335/375 (89.33%), Query Frame = 0
BLAST of Sed0015960 vs. NCBI nr
Match: TYK09463.1 (tRNA (adenine(37)-N6)-methyltransferase isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 587.0 bits (1512), Expect = 1.2e-163 Identity = 296/380 (77.89%), Postives = 339/380 (89.21%), Query Frame = 0
BLAST of Sed0015960 vs. ExPASy Swiss-Prot
Match: Q9BU70 (tRNA (adenine(37)-N6)-methyltransferase OS=Homo sapiens OX=9606 GN=TRMO PE=1 SV=2) HSP 1 Score: 145.6 bits (366), Expect = 1.2e-33 Identity = 75/150 (50.00%), Postives = 98/150 (65.33%), Query Frame = 0
BLAST of Sed0015960 vs. ExPASy Swiss-Prot
Match: Q562D6 (tRNA (adenine(37)-N6)-methyltransferase OS=Mus musculus OX=10090 GN=Trmo PE=2 SV=2) HSP 1 Score: 143.3 bits (360), Expect = 5.8e-33 Identity = 74/149 (49.66%), Postives = 97/149 (65.10%), Query Frame = 0
BLAST of Sed0015960 vs. ExPASy Swiss-Prot
Match: Q4V7E0 (tRNA (adenine(37)-N6)-methyltransferase OS=Rattus norvegicus OX=10116 GN=Trmo PE=2 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 8.4e-32 Identity = 72/146 (49.32%), Postives = 96/146 (65.75%), Query Frame = 0
BLAST of Sed0015960 vs. ExPASy Swiss-Prot
Match: Q9RPT0 (Putative S-adenosylmethionine-dependent methyltransferase RcsF OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=rcsF PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 2.4e-26 Identity = 65/155 (41.94%), Postives = 97/155 (62.58%), Query Frame = 0
BLAST of Sed0015960 vs. ExPASy Swiss-Prot
Match: O68638 (Putative S-adenosylmethionine-dependent methyltransferase RcsF OS=Pseudomonas aeruginosa OX=287 GN=rcsF PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 4.9e-24 Identity = 62/154 (40.26%), Postives = 93/154 (60.39%), Query Frame = 0
BLAST of Sed0015960 vs. ExPASy TrEMBL
Match: A0A6J1BYL5 (uncharacterized protein LOC111006924 OS=Momordica charantia OX=3673 GN=LOC111006924 PE=4 SV=1) HSP 1 Score: 617.1 bits (1590), Expect = 5.1e-173 Identity = 312/380 (82.11%), Postives = 345/380 (90.79%), Query Frame = 0
BLAST of Sed0015960 vs. ExPASy TrEMBL
Match: A0A6J1HPV8 (uncharacterized protein LOC111464972 OS=Cucurbita moschata OX=3662 GN=LOC111464972 PE=4 SV=1) HSP 1 Score: 590.1 bits (1520), Expect = 6.7e-165 Identity = 301/375 (80.27%), Postives = 335/375 (89.33%), Query Frame = 0
BLAST of Sed0015960 vs. ExPASy TrEMBL
Match: A0A5D3CC84 (tRNA (Adenine(37)-N6)-methyltransferase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00580 PE=4 SV=1) HSP 1 Score: 587.0 bits (1512), Expect = 5.6e-164 Identity = 296/380 (77.89%), Postives = 339/380 (89.21%), Query Frame = 0
BLAST of Sed0015960 vs. ExPASy TrEMBL
Match: A0A6J1JCZ9 (uncharacterized protein LOC111485678 OS=Cucurbita maxima OX=3661 GN=LOC111485678 PE=4 SV=1) HSP 1 Score: 586.6 bits (1511), Expect = 7.4e-164 Identity = 297/375 (79.20%), Postives = 334/375 (89.07%), Query Frame = 0
BLAST of Sed0015960 vs. ExPASy TrEMBL
Match: A0A1S3BW92 (tRNA (Adenine(37)-N6)-methyltransferase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494312 PE=4 SV=1) HSP 1 Score: 582.8 bits (1501), Expect = 1.1e-162 Identity = 294/380 (77.37%), Postives = 338/380 (88.95%), Query Frame = 0
BLAST of Sed0015960 vs. TAIR 10
Match: AT4G28020.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0066 (InterPro:IPR001378); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 379.4 bits (973), Expect = 3.4e-105 Identity = 195/360 (54.17%), Postives = 259/360 (71.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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