Sed0015931 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCGTGGTTATAAATAAACCCCCACCGGTTCACATCTGGGTTCTCATCACAATCCTCTAAAAAGAAATCTGAAATTAATTTGGTAGTCCTCAGCTTAGGCTAAGGCGAAAAATTAATCAAGAACTGGCTAACGGTGAGGAAATTCTGGAGGAAAAAGAAGATAGCAGTAACCAAAGGGTGGTTTTGGCCCTATATGAAGCCTTGAGCTCTCGAAACGTGAACCGGGTTCACCAGATCCTCGCCCCCGATCTGGAGTGGTGGTTCCATGGTCCGCCCTCGCACCAGTTTCTGATGCGCCTTCTCACTGGAGCCTCATCCGACGGTCAATCTTTTAAGTTCCTTCCTCAATCCATCGCTTCCTTCGGCCCCACCGTCCTCGTCGAAGGCTGCGATCCTACCCGTTCGATCTCCTGGATCCACGCCTGGACCATCTCTCATGGGATAATTTCTCAGGTTCGTGAGTATTTCAATACCTCCCTGACCGTTACCCGTCTTCCGGATCCGACCCGACCCGAGATTTCCTCTGCCTCCTCCTCGTCGGTGCTTCATTTCCCTTCTGTTTGGGAAAGTAGCCTCTCCGGTCGGGTCGGTAAGTCCGTGCCGGGTCTCGTCTTGGCTATTTAGTTGTGCCCTTTTCTATTGTAACTGAATAAAGTGTAAGATGTAAGAAATTTGGTGTTTGTTTTGGGTGATTTAGGGGTTTCTGGTTGTGTTTGGTTTGGTGTGATTTAGTGTTTTGGGTTAATACCATCGAGATGAGATCTCATTGGTCAATTCCCGACGTCTTTGTAATCTTTTATAATAAAGGAT GTCGTGGTTATAAATAAACCCCCACCGGTTCACATCTGGGTTCTCATCACAATCCTCTAAAAAGAAATCTGAAATTAATTTGGTAGTCCTCAGCTTAGGCTAAGGCGAAAAATTAATCAAGAACTGGCTAACGGTGAGGAAATTCTGGAGGAAAAAGAAGATAGCAGTAACCAAAGGGTGGTTTTGGCCCTATATGAAGCCTTGAGCTCTCGAAACGTGAACCGGGTTCACCAGATCCTCGCCCCCGATCTGGAGTGGTGGTTCCATGGTCCGCCCTCGCACCAGTTTCTGATGCGCCTTCTCACTGGAGCCTCATCCGACGGTCAATCTTTTAAGTTCCTTCCTCAATCCATCGCTTCCTTCGGCCCCACCGTCCTCGTCGAAGGCTGCGATCCTACCCGTTCGATCTCCTGGATCCACGCCTGGACCATCTCTCATGGGATAATTTCTCAGGTTCGTGAGTATTTCAATACCTCCCTGACCGTTACCCGTCTTCCGGATCCGACCCGACCCGAGATTTCCTCTGCCTCCTCCTCGTCGGTGCTTCATTTCCCTTCTGTTTGGGAAAGTAGCCTCTCCGGTCGGGTCGGTAAGTCCGTGCCGGGTCTCGTCTTGGCTATTTAGTTGTGCCCTTTTCTATTGTAACTGAATAAAGTGTAAGATGTAAGAAATTTGGTGTTTGTTTTGGGTGATTTAGGGGTTTCTGGTTGTGTTTGGTTTGGTGTGATTTAGTGTTTTGGGTTAATACCATCGAGATGAGATCTCATTGGTCAATTCCCGACGTCTTTGTAATCTTTTATAATAAAGGAT ATGCGCCTTCTCACTGGAGCCTCATCCGACGGTCAATCTTTTAAGTTCCTTCCTCAATCCATCGCTTCCTTCGGCCCCACCGTCCTCGTCGAAGGCTGCGATCCTACCCGTTCGATCTCCTGGATCCACGCCTGGACCATCTCTCATGGGATAATTTCTCAGGTTCGTGAGTATTTCAATACCTCCCTGACCGTTACCCGTCTTCCGGATCCGACCCGACCCGAGATTTCCTCTGCCTCCTCCTCGTCGGTGCTTCATTTCCCTTCTGTTTGGGAAAGTAGCCTCTCCGGTCGGGTCGGTAAGTCCGTGCCGGGTCTCGTCTTGGCTATTTAG MRLLTGASSDGQSFKFLPQSIASFGPTVLVEGCDPTRSISWIHAWTISHGIISQVREYFNTSLTVTRLPDPTRPEISSASSSSVLHFPSVWESSLSGRVGKSVPGLVLAI Homology
BLAST of Sed0015931 vs. NCBI nr
Match: XP_022964733.1 (wound-induced protein 1-like [Cucurbita moschata]) HSP 1 Score: 177.9 bits (450), Expect = 4.6e-41 Identity = 91/115 (79.13%), Postives = 101/115 (87.83%), Query Frame = 0
BLAST of Sed0015931 vs. NCBI nr
Match: XP_023550946.1 (wound-induced protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 177.6 bits (449), Expect = 6.0e-41 Identity = 87/110 (79.09%), Postives = 101/110 (91.82%), Query Frame = 0
BLAST of Sed0015931 vs. NCBI nr
Match: XP_022939242.1 (wound-induced protein 1-like [Cucurbita moschata]) HSP 1 Score: 176.8 bits (447), Expect = 1.0e-40 Identity = 87/110 (79.09%), Postives = 100/110 (90.91%), Query Frame = 0
BLAST of Sed0015931 vs. NCBI nr
Match: KAG6578463.1 (Wound-induced protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 175.6 bits (444), Expect = 2.3e-40 Identity = 87/110 (79.09%), Postives = 99/110 (90.00%), Query Frame = 0
BLAST of Sed0015931 vs. NCBI nr
Match: KAG7016029.1 (Wound-induced protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 175.6 bits (444), Expect = 2.3e-40 Identity = 87/110 (79.09%), Postives = 99/110 (90.00%), Query Frame = 0
BLAST of Sed0015931 vs. ExPASy Swiss-Prot
Match: P20144 (Wound-induced protein 1 OS=Solanum tuberosum OX=4113 GN=WUN1 PE=2 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.2e-31 Identity = 71/111 (63.96%), Postives = 84/111 (75.68%), Query Frame = 0
BLAST of Sed0015931 vs. ExPASy Swiss-Prot
Match: Q94AK6 (Senescence associated gene 20 OS=Arabidopsis thaliana OX=3702 GN=SAG20 PE=2 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 4.7e-28 Identity = 66/111 (59.46%), Postives = 78/111 (70.27%), Query Frame = 0
BLAST of Sed0015931 vs. ExPASy TrEMBL
Match: A0A6J1HLS4 (wound-induced protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111464719 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 2.2e-41 Identity = 91/115 (79.13%), Postives = 101/115 (87.83%), Query Frame = 0
BLAST of Sed0015931 vs. ExPASy TrEMBL
Match: A0A6J1FG94 (wound-induced protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111445215 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 5.0e-41 Identity = 87/110 (79.09%), Postives = 100/110 (90.91%), Query Frame = 0
BLAST of Sed0015931 vs. ExPASy TrEMBL
Match: A0A6J1JZN6 (wound-induced protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111488891 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.9e-40 Identity = 86/110 (78.18%), Postives = 99/110 (90.00%), Query Frame = 0
BLAST of Sed0015931 vs. ExPASy TrEMBL
Match: A0A6J1JK36 (wound-induced protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111487633 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 5.5e-40 Identity = 89/115 (77.39%), Postives = 100/115 (86.96%), Query Frame = 0
BLAST of Sed0015931 vs. ExPASy TrEMBL
Match: A0A5D3BZG9 (Wound-induced protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001370 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 2.3e-38 Identity = 87/117 (74.36%), Postives = 100/117 (85.47%), Query Frame = 0
BLAST of Sed0015931 vs. TAIR 10
Match: AT3G10985.1 (senescence associated gene 20 ) HSP 1 Score: 125.2 bits (313), Expect = 3.3e-29 Identity = 66/111 (59.46%), Postives = 78/111 (70.27%), Query Frame = 0
BLAST of Sed0015931 vs. TAIR 10
Match: AT5G01740.1 (Nuclear transport factor 2 (NTF2) family protein ) HSP 1 Score: 63.9 bits (154), Expect = 9.1e-11 Identity = 41/113 (36.28%), Postives = 60/113 (53.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|