Sed0015928 (gene) Chayote v1

Overview
NameSed0015928
Typegene
OrganismSechium edule (Chayote v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit N
LocationLG05: 42630312 .. 42634091 (-)
RNA-Seq ExpressionSed0015928
SyntenySed0015928
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTCAAATACCATCGGTAATGGTTATCTCCCTGTTCTCATCCATTTGGTCTTGCCATATCACTATCAGCTGATGCACTCTCAGTTATACATTTAAAAAGAGCACCAAAAGCAGATAGATGATTTTATCTCCATTTTCATCCACACAAAACCCTAACCATGGCAACTCCATAAACTTCAACCTCTCTTAATTCCTCATCCATGGCCTCCTTTCTTTCCCCCATCTTCATCCTTCCTTCATCATTCAATTTCTCCTTCACAAAATCCACTCCATGGCCGCCGTAGCCTCCATGTTCAATGTCGCAGCAGCCCTAGCGCCGCCGCTCCACCTTCATCCTCGGCGGCGCCGGCTCCTCAATCCACCGAACTCCGCCACGACGCTGCCGGCGAGCAGGCGGAGGTCGCGATTCGGCGTGAGATGCGAGGGGATCGGAATCGGCGATTTCATCGGCGGAGATTTGCTCAAACTCGACCTAGGTCAATGGTTGGCCGATGTGGAGGAACACAAAGCCCTAGCGATCTACTCGCCGCACGAAGGCGGCTACGAAGGCCGATACCTAAATCGCCTACGCTACCAGGGCTATTACTTCCTCGATCTCTCCGCCCGCGGTCTCGGCGATCCTGAAACCACTCTCACCAAGATCCATCCAGTTTGCCCTGTCCGTTGAAGCCAATCCTTACGGCTGGTTCAATTTCATCGAGATTTTGATCTTTTCTAGGGATTGTTCCATTGTTCTTACTGTTTGGCTTCGAATTTGCAGGCGCATTTAGGGAAACAGCCGATTGCTCGGTGGTATTTCCCGCCGGAGGTTGATTATAGGCTGGAGGCTCTGCCTCCGAACGCCAAGGGATTGGTGGTGTGGATAATCGAGGCGAAGGTGAGATTCTTTGATCTGCCATTACTGACTTAGAATCTACCTAGAATGGATTATAGAATTGTGAACACTGTTCATCAGGTTCTGTCGAAGGCGGAGCTGCAGTTCCTTGCCCTGCTGCCGACTCTCCGGCCTAAAGTCCGAGTCATCGCTGAATGCGGGAACTGGTAATTTCCTTCTCTGCTTTGTTTAGAAAGGTTGAGGAAATAGTTTCTGTTGGACAAAAAATATGGTGTGTGAATCATTTGACATCCCCTCAAGAGAAAGTGTAACTACTTTAACTGCCGTGTTCAAGAAATAGTTTTAGATCCCTTCATTCAAAGTGGAAATATTTGGAATGGCCTTAATTGGAAGGGAAAAGCTTTGGAATGAAGGATATTTATTTGTAAGAGGTGAGGTGGAATTTCTTAGAATAAAGAATTACAAATTCAAAATTTATCTATACTTATTTTTCATGTTTGGGTCAGCTTTTGCGCATCTCAACTAATGTCATGAGAAATACCTTTTGACCTTAAACATTTGGATGCCAAGAAAACTCCTAAAAAATTAATTCCCAAATAGATGACCACAATTTTCTTTTTAACCAATTGAGTAACTCCATGATCATTAATATCATGTATATTTTTATACCGACTAGAGTAATAGCTGATAAATGTGTTCGTAACTTTTTCATAAATTCAAATCTACCCCCTCATTATTGATAAAAAAAGAATGATAAAACGTCGAAATATATTAAACTTTGACAAAATTTTGGGTCCTCCATTGATGAAAGGGTTTCTCGGTGACCTGATGGATATGATTTTTTTTTTTAATTTACCAATATTTTTTTTTATAGATAAGAAACAATTTCATTGATAATATGAAATTACAAAATACATGATCTCCAACTATTAATAAGAATATTGTAACTATAATCATGAAATAATGGAGACATTTTACACCAAGATACCACCATATAAGTAATATTGTCTATGAACCGGTCGAAGTGATTAGATCTTCCTTTGAAGATCCTGCGATTCCGCTCGATCCAAATATTCCAACAATATGCTTTGATAAAGTTTTCCCATAATGATTTTTTCTTTTCTTCTTTGAATGGGTGGTTCGAAAGGGATAATATAAGGAGCTCGTGAGGATCATTAGGCATGACCAAATACCAAGAGAATGCCCCCCGAATATAATCCCAGAATGCATTTGCATGAGTACAAGATATCATTAGATGTGGTTGAGTTTCGGTGGATTTATAACAGATGGTACACCATTGTGGAGAGAGAGTCATATGTGGAAGTCTACGTTGGAGCCGATCATTGGTGTTGATGGCCCCGTGACTCAATTCCCAAAGGAAGAATTTCACCTTCTTCGGGCATTTCCCTTTCCAAATAGAACTATAAATCTGTACCTCAGGTATTGTAGCAGATGCAATGGCTTTAAGATCTTTGAGTAGGGAATGGACAGTGAACTTTCCACTAGGTTCCAGGTTCCAAATGCAGCAGTCCCTACCCTCGGCCAGAGTCACTCCATCAAGCTGATTCTGGAGAGAATAAAACTTATCTAGTTCATCATCTTTCAGGTTCCTTCTAAGCCTCAAGTTCCAGTTTTTCCTTTCAACCTCCCATGTCTTACTAACAGTCATATCTTTTTCTTTGGAGATGTGGAAAAGAAGAGGGAAAGCATGGTTGAGAGGGGAATCATTAAGCCATTTATCCTTCCAAAAAAGAGTGGTCTCACCATTCTTCACTGTATAAAGATTCGATCCTGAATCATGGGGGCAAGAGGAAGAGGATGTACTTCCATGGACCTTTAGTCGAAGCCAATGTTGCCCTTCTTGATCTATTGCTAAATTGACTTGTGCCATACTTGTCATCAAATCACTTTCCTCCATAGAGCTTGTTCTTCAACATAATATCTCCAAATCCACTTTGTAAGAAGGGCCTCGTTCTTGGGTTTGATTTTGTCAATATCAAGGCCCCCTTGTAAATGTGAGAGTGTAATAGTATCTCATTTAATGAGATGCATCCCTTTGTCATCAATACACCCCTTCCAGAGGAAGTTTCTAATCATTCTTTCCAAGGTAACTACAACTCTACTAGGCATTTTAAACACCGACATAAAGTATGTGGAGAGATTAGCAAGAGTGACTTTGATGAGAGTCAACCTTCCTCCCTTCGATCTATGCTGATTCTTCCAAGATAAGATCTTCTTTTCCACTTTCTGTAGCATTGGTTCTCAAAAAACATTGGAATTAGGATTACCAATATTTAGGCCGATAAATTTGTAAGAGCGATCTTTTGGTTATCAAATCATACATCATGGTAACCAAGTTTATTAATCCTAAACATATATCATGGACTAAAGTCCAATCCTACTAACTGTTATGCTAAAATAATTATTGAGAATCCATAATTAGGATTTGAAATCACTCATGCAAACAAATTAGATGAAGGTGGAAGATTGACTTTCTGTTCATACAGGAGGAAGTTCATGTGGAAACCGCTCAAGGAGATTGCAGGAGGAGTTTAAAGACGCTTAAGGGAGGTTAATTCTCCATAAACAAGAATAATACAACATTTTTTTTTCAAGTAATTATCTCAAATTCTTGGTTAAATGGTTCAGCACTTCCTCCTCTCCCAAATTTGGAAAATATCAAGATAATGATGTTTATTATTTAGGGATATTTAGAGTAAATTACTAATAGTATTCTTGTAATTTCATGCAAATATTATTAAGTTATATATTACATGTTATCATCTTCAATGTCAGCCCTTCAAGTCGAGCATACATGTCAAGGGGGTGATTGGATTTTGGTGTTGAAAAGGGGAGAGGAGAGAAAGTTGAGGAGAAAGAGGAAGTAGGGATGATTGGATTTTGGTGTTGAAAAGGAGAGGGAAAGTTGAAGAAAAAGAGGAAGT

mRNA sequence

ATTTCAAATACCATCGGTAATGGTTATCTCCCTGTTCTCATCCATTTGGTCTTGCCATATCACTATCAGCTGATGCACTCTCAGTTATACATTTAAAAAGAGCACCAAAAGCAGATAGATGATTTTATCTCCATTTTCATCCACACAAAACCCTAACCATGGCAACTCCATAAACTTCAACCTCTCTTAATTCCTCATCCATGGCCTCCTTTCTTTCCCCCATCTTCATCCTTCCTTCATCATTCAATTTCTCCTTCACAAAATCCACTCCATGGCCGCCGTAGCCTCCATGTTCAATGTCGCAGCAGCCCTAGCGCCGCCGCTCCACCTTCATCCTCGGCGGCGCCGGCTCCTCAATCCACCGAACTCCGCCACGACGCTGCCGGCGAGCAGGCGGAGGTCGCGATTCGGCGTGAGATGCGAGGGGATCGGAATCGGCGATTTCATCGGCGGAGATTTGCTCAAACTCGACCTAGGTCAATGGTTGGCCGATGTGGAGGAACACAAAGCCCTAGCGATCTACTCGCCGCACGAAGGCGGCTACGAAGGCCGATACCTAAATCGCCTACGCTACCAGGGCTATTACTTCCTCGATCTCTCCGCCCGCGGTCTCGGCGATCCTGAAACCACTCTCACCAAGATCCATCCAGTTTGCCCTGCGCATTTAGGGAAACAGCCGATTGCTCGGTGGTATTTCCCGCCGGAGGTTGATTATAGGCTGGAGGCTCTGCCTCCGAACGCCAAGGGATTGGTGGTGTGGATAATCGAGGCGAAGGTTCTGTCGAAGGCGGAGCTGCAGTTCCTTGCCCTGCTGCCGACTCTCCGGCCTAAAGTCCGAGTCATCGCTGAATGCGGGAACTGGAGGAAGTTCATGTGGAAACCGCTCAAGGAGATTGCAGGAGGAGTTTAAAGACGCTTAAGGGAGGTTAATTCTCCATAAACAAGAATAATACAACATTTTTTTTTCAAGTAATTATCTCAAATTCTTGGTTAAATGGTTCAGCACTTCCTCCTCTCCCAAATTTGGAAAATATCAAGATAATGATGTTTATTATTTAGGGATATTTAGAGTAAATTACTAATAGTATTCTTGTAATTTCATGCAAATATTATTAAGTTATATATTACATGTTATCATCTTCAATGTCAGCCCTTCAAGTCGAGCATACATGTCAAGGGGGTGATTGGATTTTGGTGTTGAAAAGGGGAGAGGAGAGAAAGTTGAGGAGAAAGAGGAAGTAGGGATGATTGGATTTTGGTGTTGAAAAGGAGAGGGAAAGTTGAAGAAAAAGAGGAAGT

Coding sequence (CDS)

ATGGCCGCCGTAGCCTCCATGTTCAATGTCGCAGCAGCCCTAGCGCCGCCGCTCCACCTTCATCCTCGGCGGCGCCGGCTCCTCAATCCACCGAACTCCGCCACGACGCTGCCGGCGAGCAGGCGGAGGTCGCGATTCGGCGTGAGATGCGAGGGGATCGGAATCGGCGATTTCATCGGCGGAGATTTGCTCAAACTCGACCTAGGTCAATGGTTGGCCGATGTGGAGGAACACAAAGCCCTAGCGATCTACTCGCCGCACGAAGGCGGCTACGAAGGCCGATACCTAAATCGCCTACGCTACCAGGGCTATTACTTCCTCGATCTCTCCGCCCGCGGTCTCGGCGATCCTGAAACCACTCTCACCAAGATCCATCCAGTTTGCCCTGCGCATTTAGGGAAACAGCCGATTGCTCGGTGGTATTTCCCGCCGGAGGTTGATTATAGGCTGGAGGCTCTGCCTCCGAACGCCAAGGGATTGGTGGTGTGGATAATCGAGGCGAAGGTTCTGTCGAAGGCGGAGCTGCAGTTCCTTGCCCTGCTGCCGACTCTCCGGCCTAAAGTCCGAGTCATCGCTGAATGCGGGAACTGGAGGAAGTTCATGTGGAAACCGCTCAAGGAGATTGCAGGAGGAGTTTAA

Protein sequence

MAAVASMFNVAAALAPPLHLHPRRRRLLNPPNSATTLPASRRRSRFGVRCEGIGIGDFIGGDLLKLDLGQWLADVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSKAELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGGV
Homology
BLAST of Sed0015928 vs. NCBI nr
Match: XP_023533875.1 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 383.6 bits (984), Expect = 1.1e-102
Identity = 191/219 (87.21%), Postives = 194/219 (88.58%), Query Frame = 0

Query: 1   MAAVASMFNVAAALAPPLHLHPRRRRLLNPPNSATTLPASRRRSRFG--------VRCEG 60
           M  +ASM N  AALAP LHLHPRR   L PP SA TL    RR+RFG        VRCEG
Sbjct: 1   MPPLASMLN-GAALAPSLHLHPRR---LRPPTSAATLQVIGRRTRFGTGKGRAATVRCEG 60

Query: 61  IGIGDFIGGDLLKLDLGQWLADVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR 120
           IGIGDFIGGDLLK DLGQWL+DVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR
Sbjct: 61  IGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR 120

Query: 121 GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSK 180
           GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSK
Sbjct: 121 GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSK 180

Query: 181 AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGG 212
           AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGG
Sbjct: 181 AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGG 215

BLAST of Sed0015928 vs. NCBI nr
Match: XP_022947360.1 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita moschata])

HSP 1 Score: 382.5 bits (981), Expect = 2.4e-102
Identity = 190/219 (86.76%), Postives = 194/219 (88.58%), Query Frame = 0

Query: 1   MAAVASMFNVAAALAPPLHLHPRRRRLLNPPNSATTLPASRRRSRFG--------VRCEG 60
           M  +ASM N  AALAP LHLHPRR   L PP SA TL    RR+RFG        VRCEG
Sbjct: 1   MPPLASMLN-GAALAPSLHLHPRR---LRPPTSAATLQVIGRRTRFGTGKGRAATVRCEG 60

Query: 61  IGIGDFIGGDLLKLDLGQWLADVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR 120
           IGIGDFIGGDLLK DLGQWL+DVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR
Sbjct: 61  IGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR 120

Query: 121 GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSK 180
           GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRL+ALPPNAKGLVVWIIEAKVLSK
Sbjct: 121 GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLDALPPNAKGLVVWIIEAKVLSK 180

Query: 181 AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGG 212
           AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGG
Sbjct: 181 AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGG 215

BLAST of Sed0015928 vs. NCBI nr
Match: KAG6605370.1 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035327.1 NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 380.2 bits (975), Expect = 1.2e-101
Identity = 189/218 (86.70%), Postives = 193/218 (88.53%), Query Frame = 0

Query: 1   MAAVASMFNVAAALAPPLHLHPRRRRLLNPPNSATTLPASRRRSRFG--------VRCEG 60
           M  +ASM N  AALAP LHLHPRR   L PP SA TL    RR+RFG        VRCEG
Sbjct: 1   MPPLASMLN-GAALAPSLHLHPRR---LRPPTSAATLQVIGRRTRFGTGKGRAVTVRCEG 60

Query: 61  IGIGDFIGGDLLKLDLGQWLADVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR 120
           IGIGDFIGGDLLK DLGQWL+DVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR
Sbjct: 61  IGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR 120

Query: 121 GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSK 180
           GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRL+ALPPNAKGLVVWIIEAKVLSK
Sbjct: 121 GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLDALPPNAKGLVVWIIEAKVLSK 180

Query: 181 AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 211
           AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG
Sbjct: 181 AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 214

BLAST of Sed0015928 vs. NCBI nr
Match: XP_023007243.1 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita maxima])

HSP 1 Score: 377.9 bits (969), Expect = 5.9e-101
Identity = 189/219 (86.30%), Postives = 192/219 (87.67%), Query Frame = 0

Query: 1   MAAVASMFNVAAALAPPLHLHPRRRRLLNPPNSATTLPASRRRSRFG--------VRCEG 60
           M  +ASM N  AALAP LHLHPRR   L P  S  TL    RR+RFG        VRCEG
Sbjct: 1   MPPLASMLN-GAALAPSLHLHPRR---LRPLTSPATLQVIGRRTRFGTGKGRAATVRCEG 60

Query: 61  IGIGDFIGGDLLKLDLGQWLADVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR 120
           IGIGDFIGGDLLK DLGQWL+DVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR
Sbjct: 61  IGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR 120

Query: 121 GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSK 180
           GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSK
Sbjct: 121 GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSK 180

Query: 181 AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGG 212
           AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGG
Sbjct: 181 AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGG 215

BLAST of Sed0015928 vs. NCBI nr
Match: XP_008456262.1 (PREDICTED: NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucumis melo])

HSP 1 Score: 369.8 bits (948), Expect = 1.6e-98
Identity = 185/218 (84.86%), Postives = 189/218 (86.70%), Query Frame = 0

Query: 1   MAAVASMFNVAAALAPPLHLHPRRRRLLNPPNSATTLPASRRRSRF--------GVRCEG 60
           MA VASMFN  A LAPPLHLH  R    +P  S   +P + RRS F         VRCEG
Sbjct: 1   MAPVASMFN-GAPLAPPLHLHSSRH---HPLTSPAMVPINNRRSSFRPGNGRAATVRCEG 60

Query: 61  IGIGDFIGGDLLKLDLGQWLADVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR 120
           IGIGDFIGGDLLK DLGQWL+DVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR
Sbjct: 61  IGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR 120

Query: 121 GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSK 180
           GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRL ALPPNAKGLVVWIIEAKVLSK
Sbjct: 121 GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSK 180

Query: 181 AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 211
           AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG
Sbjct: 181 AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 214

BLAST of Sed0015928 vs. ExPASy Swiss-Prot
Match: Q9LVM2 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhN PE=2 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.7e-80
Identity = 137/170 (80.59%), Postives = 154/170 (90.59%), Query Frame = 0

Query: 40  SRRRSRFGVRCEGIGIGDFIGGDLLKLDLGQWLADVEEHKALAIYSPHEGGYEGRYLNRL 99
           S+RR   GV+C    I D+IGGDL+K D+GQWL DVEEHKA+AIY+PHEGGYEGRYLNRL
Sbjct: 36  SKRRRSTGVKCS--SIADYIGGDLVKPDIGQWLQDVEEHKAIAIYAPHEGGYEGRYLNRL 95

Query: 100 RYQGYYFLDLSARGLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKG 159
           + QGYYFLD+SARGLGDPETTL K +PVCPAHLGKQPIARWY+PPEVDYRL ALPP+AKG
Sbjct: 96  KMQGYYFLDISARGLGDPETTLLKNYPVCPAHLGKQPIARWYYPPEVDYRLAALPPSAKG 155

Query: 160 LVVWIIEAKVLSKAELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIA 210
           LVVW++EAKVLSK+ELQFLALLP+LRP VRVIAECGNWRKF+WKPL EIA
Sbjct: 156 LVVWVLEAKVLSKSELQFLALLPSLRPNVRVIAECGNWRKFVWKPLAEIA 203

BLAST of Sed0015928 vs. ExPASy Swiss-Prot
Match: B8HUU1 (NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=ndhN PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.6e-35
Identity = 72/147 (48.98%), Postives = 99/147 (67.35%), Query Frame = 0

Query: 70  QWLADVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCP 129
           Q++ D+E+  AL IY P EGG+EGRY  RLR  GY  L +SA GLGD  + LT++H V P
Sbjct: 9   QFIQDLEKSGALGIYVPSEGGFEGRYQRRLRAAGYSTLHISAPGLGDLPSYLTQVHGVRP 68

Query: 130 AHLGKQP-------IARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSKAELQFLALLP 189
            HLGK         +  ++ PP V+Y LE LPP A+GLV+W+I+ K LS+ EL +L++LP
Sbjct: 69  PHLGKSTQGNTDWGVKTFFLPPLVNYHLENLPPKARGLVLWMIDGKRLSRQELAYLSILP 128

Query: 190 TLRPKVRVIAECGNWRKFMWKPLKEIA 210
              PKV+++ E G  R+F W+PLKE+A
Sbjct: 129 AQEPKVKIVIELGGDRQFRWQPLKEMA 155

BLAST of Sed0015928 vs. ExPASy Swiss-Prot
Match: B7JYJ3 (NAD(P)H-quinone oxidoreductase subunit N OS=Rippkaea orientalis (strain PCC 8801) OX=41431 GN=ndhN PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.9e-34
Identity = 69/141 (48.94%), Postives = 95/141 (67.38%), Query Frame = 0

Query: 75  VEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCPAHLGK 134
           +E+  +LA+Y+P EGG+EGRY  RLR  GY+   L+ARGLGD    L  +H V P HLGK
Sbjct: 14  LEKSGSLAVYAPLEGGFEGRYQRRLRTNGYHTFSLTARGLGDVSAYLMGVHGVRPPHLGK 73

Query: 135 QPIAR-------WYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSKAELQFLALLPTLRPK 194
           + I +       ++ PP   Y+LE LPP +KGLV+WI+E  +LS+ EL++LA LPTL P+
Sbjct: 74  KNIGQEAAVGPVYFVPPIAAYQLETLPPKSKGLVLWILEGFILSQTELEYLANLPTLEPR 133

Query: 195 VRVIAECGNWRKFMWKPLKEI 209
           ++V+ E G  R F WKPL E+
Sbjct: 134 LKVVIELGGERYFSWKPLPEV 154

BLAST of Sed0015928 vs. ExPASy Swiss-Prot
Match: Q31L05 (NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=ndhN PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.1e-33
Identity = 73/147 (49.66%), Postives = 91/147 (61.90%), Query Frame = 0

Query: 70  QWLADVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCP 129
           ++L  +E+  ALA+Y+P EGGYEGRYL RLR +GY  L  SARGLGDP   L  IH V P
Sbjct: 9   KFLRALEQEGALAVYAPLEGGYEGRYLRRLRSKGYSALTYSARGLGDPAQFLMDIHGVRP 68

Query: 130 AHLGKQPIAR-------WYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSKAELQFLALLP 189
            HLGKQ I          Y  P V Y L+ LP NAKGLV+W++E  VLS  EL +   LP
Sbjct: 69  PHLGKQTIGNEAAVGRVEYVLPLVGYPLQNLPANAKGLVLWLLEGHVLSPQELSYFVTLP 128

Query: 190 TLRPKVRVIAECGNWRKFMWKPLKEIA 210
              P+++V+ E G  R F W+PL  +A
Sbjct: 129 QAEPRLKVVIEMGGDRGFSWQPLAAVA 155

BLAST of Sed0015928 vs. ExPASy Swiss-Prot
Match: Q5N0W6 (NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=ndhN PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.1e-33
Identity = 73/147 (49.66%), Postives = 91/147 (61.90%), Query Frame = 0

Query: 70  QWLADVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCP 129
           ++L  +E+  ALA+Y+P EGGYEGRYL RLR +GY  L  SARGLGDP   L  IH V P
Sbjct: 9   KFLRALEQEGALAVYAPLEGGYEGRYLRRLRSKGYSALTYSARGLGDPAQFLMDIHGVRP 68

Query: 130 AHLGKQPIAR-------WYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSKAELQFLALLP 189
            HLGKQ I          Y  P V Y L+ LP NAKGLV+W++E  VLS  EL +   LP
Sbjct: 69  PHLGKQTIGNEAAVGRVEYVLPLVGYPLQNLPANAKGLVLWLLEGHVLSPQELSYFVTLP 128

Query: 190 TLRPKVRVIAECGNWRKFMWKPLKEIA 210
              P+++V+ E G  R F W+PL  +A
Sbjct: 129 QAEPRLKVVIEMGGDRGFSWQPLAAVA 155

BLAST of Sed0015928 vs. ExPASy TrEMBL
Match: A0A6J1G6N3 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111451247 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.2e-102
Identity = 190/219 (86.76%), Postives = 194/219 (88.58%), Query Frame = 0

Query: 1   MAAVASMFNVAAALAPPLHLHPRRRRLLNPPNSATTLPASRRRSRFG--------VRCEG 60
           M  +ASM N  AALAP LHLHPRR   L PP SA TL    RR+RFG        VRCEG
Sbjct: 1   MPPLASMLN-GAALAPSLHLHPRR---LRPPTSAATLQVIGRRTRFGTGKGRAATVRCEG 60

Query: 61  IGIGDFIGGDLLKLDLGQWLADVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR 120
           IGIGDFIGGDLLK DLGQWL+DVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR
Sbjct: 61  IGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR 120

Query: 121 GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSK 180
           GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRL+ALPPNAKGLVVWIIEAKVLSK
Sbjct: 121 GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLDALPPNAKGLVVWIIEAKVLSK 180

Query: 181 AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGG 212
           AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGG
Sbjct: 181 AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGG 215

BLAST of Sed0015928 vs. ExPASy TrEMBL
Match: A0A6J1L763 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111499786 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.8e-101
Identity = 189/219 (86.30%), Postives = 192/219 (87.67%), Query Frame = 0

Query: 1   MAAVASMFNVAAALAPPLHLHPRRRRLLNPPNSATTLPASRRRSRFG--------VRCEG 60
           M  +ASM N  AALAP LHLHPRR   L P  S  TL    RR+RFG        VRCEG
Sbjct: 1   MPPLASMLN-GAALAPSLHLHPRR---LRPLTSPATLQVIGRRTRFGTGKGRAATVRCEG 60

Query: 61  IGIGDFIGGDLLKLDLGQWLADVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR 120
           IGIGDFIGGDLLK DLGQWL+DVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR
Sbjct: 61  IGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR 120

Query: 121 GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSK 180
           GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSK
Sbjct: 121 GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSK 180

Query: 181 AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGG 212
           AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGG
Sbjct: 181 AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGG 215

BLAST of Sed0015928 vs. ExPASy TrEMBL
Match: A0A1S3C430 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496258 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 7.7e-99
Identity = 185/218 (84.86%), Postives = 189/218 (86.70%), Query Frame = 0

Query: 1   MAAVASMFNVAAALAPPLHLHPRRRRLLNPPNSATTLPASRRRSRF--------GVRCEG 60
           MA VASMFN  A LAPPLHLH  R    +P  S   +P + RRS F         VRCEG
Sbjct: 1   MAPVASMFN-GAPLAPPLHLHSSRH---HPLTSPAMVPINNRRSSFRPGNGRAATVRCEG 60

Query: 61  IGIGDFIGGDLLKLDLGQWLADVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR 120
           IGIGDFIGGDLLK DLGQWL+DVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR
Sbjct: 61  IGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR 120

Query: 121 GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSK 180
           GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRL ALPPNAKGLVVWIIEAKVLSK
Sbjct: 121 GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSK 180

Query: 181 AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 211
           AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG
Sbjct: 181 AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 214

BLAST of Sed0015928 vs. ExPASy TrEMBL
Match: A0A0A0KEC3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G133810 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.1e-97
Identity = 183/218 (83.94%), Postives = 187/218 (85.78%), Query Frame = 0

Query: 1   MAAVASMFNVAAALAPPLHLHPRRRRLLNPPNSATTLPASRRRSRF--------GVRCEG 60
           MA +ASMFN  A LAPPLH H  R    +P  S   LP + RRS           VRCEG
Sbjct: 1   MAPLASMFN-GAPLAPPLHFHSSRH---HPLTSPAMLPINNRRSSLRPGNGRAATVRCEG 60

Query: 61  IGIGDFIGGDLLKLDLGQWLADVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR 120
           IGIGDFIGGDLLK DLGQWL+DVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR
Sbjct: 61  IGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR 120

Query: 121 GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSK 180
           GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRL ALPPNAKGLVVWIIEAKVLSK
Sbjct: 121 GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSK 180

Query: 181 AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 211
           AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG
Sbjct: 181 AELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 214

BLAST of Sed0015928 vs. ExPASy TrEMBL
Match: A0A5A7SWJ9 (NAD(P)H-quinone oxidoreductase subunit N OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G00760 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.9e-90
Identity = 172/205 (83.90%), Postives = 176/205 (85.85%), Query Frame = 0

Query: 1   MAAVASMFNVAAALAPPLHLHPRRRRLLNPPNSATTLPASRRRSRF--------GVRCEG 60
           MA VASMFN  A LAPPLHLH  R    +P  S   +P + RRS F         VRCEG
Sbjct: 1   MAPVASMFN-GAPLAPPLHLHSSRH---HPLTSPAMVPINNRRSSFRPGNGRAATVRCEG 60

Query: 61  IGIGDFIGGDLLKLDLGQWLADVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR 120
           IGIGDFIGGDLLK DLGQWL+DVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR
Sbjct: 61  IGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSAR 120

Query: 121 GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSK 180
           GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRL ALPPNAKGLVVWIIEAKVLSK
Sbjct: 121 GLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSK 180

Query: 181 AELQFLALLPTLRPKVRVIAECGNW 198
           AELQFLALLPTLRPKVRVIAECGNW
Sbjct: 181 AELQFLALLPTLRPKVRVIAECGNW 201

BLAST of Sed0015928 vs. TAIR 10
Match: AT5G58260.1 (oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor )

HSP 1 Score: 299.7 bits (766), Expect = 1.9e-81
Identity = 137/170 (80.59%), Postives = 154/170 (90.59%), Query Frame = 0

Query: 40  SRRRSRFGVRCEGIGIGDFIGGDLLKLDLGQWLADVEEHKALAIYSPHEGGYEGRYLNRL 99
           S+RR   GV+C    I D+IGGDL+K D+GQWL DVEEHKA+AIY+PHEGGYEGRYLNRL
Sbjct: 36  SKRRRSTGVKCS--SIADYIGGDLVKPDIGQWLQDVEEHKAIAIYAPHEGGYEGRYLNRL 95

Query: 100 RYQGYYFLDLSARGLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKG 159
           + QGYYFLD+SARGLGDPETTL K +PVCPAHLGKQPIARWY+PPEVDYRL ALPP+AKG
Sbjct: 96  KMQGYYFLDISARGLGDPETTLLKNYPVCPAHLGKQPIARWYYPPEVDYRLAALPPSAKG 155

Query: 160 LVVWIIEAKVLSKAELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIA 210
           LVVW++EAKVLSK+ELQFLALLP+LRP VRVIAECGNWRKF+WKPL EIA
Sbjct: 156 LVVWVLEAKVLSKSELQFLALLPSLRPNVRVIAECGNWRKFVWKPLAEIA 203

BLAST of Sed0015928 vs. TAIR 10
Match: AT5G58260.2 (oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor )

HSP 1 Score: 226.1 bits (575), Expect = 2.7e-59
Identity = 102/130 (78.46%), Postives = 116/130 (89.23%), Query Frame = 0

Query: 40  SRRRSRFGVRCEGIGIGDFIGGDLLKLDLGQWLADVEEHKALAIYSPHEGGYEGRYLNRL 99
           S+RR   GV+C    I D+IGGDL+K D+GQWL DVEEHKA+AIY+PHEGGYEGRYLNRL
Sbjct: 36  SKRRRSTGVKCS--SIADYIGGDLVKPDIGQWLQDVEEHKAIAIYAPHEGGYEGRYLNRL 95

Query: 100 RYQGYYFLDLSARGLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKG 159
           + QGYYFLD+SARGLGDPETTL K +PVCPAHLGKQPIARWY+PPEVDYRL ALPP+AKG
Sbjct: 96  KMQGYYFLDISARGLGDPETTLLKNYPVCPAHLGKQPIARWYYPPEVDYRLAALPPSAKG 155

Query: 160 LVVWIIEAKV 170
           LVVW++EAKV
Sbjct: 156 LVVWVLEAKV 163

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023533875.11.1e-10287.21NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita pepo subsp. p... [more]
XP_022947360.12.4e-10286.76NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita moschata][more]
KAG6605370.11.2e-10186.70NAD(P)H-quinone oxidoreductase subunit N, chloroplastic, partial [Cucurbita argy... [more]
XP_023007243.15.9e-10186.30NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita maxima][more]
XP_008456262.11.6e-9884.86PREDICTED: NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucumis melo... [more]
Match NameE-valueIdentityDescription
Q9LVM22.7e-8080.59NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Arabidopsis thaliana ... [more]
B8HUU12.6e-3548.98NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain PCC 7425 / AT... [more]
B7JYJ34.9e-3448.94NAD(P)H-quinone oxidoreductase subunit N OS=Rippkaea orientalis (strain PCC 8801... [more]
Q31L057.1e-3349.66NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus elongatus (strain PCC ... [more]
Q5N0W67.1e-3349.66NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp. (strain ATCC 27144... [more]
Match NameE-valueIdentityDescription
A0A6J1G6N31.2e-10286.76NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucurbita moschata OX... [more]
A0A6J1L7632.8e-10186.30NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucurbita maxima OX=3... [more]
A0A1S3C4307.7e-9984.86NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucumis melo OX=3656 ... [more]
A0A0A0KEC31.1e-9783.94Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G133810 PE=4 SV=1[more]
A0A5A7SWJ92.9e-9083.90NAD(P)H-quinone oxidoreductase subunit N OS=Cucumis melo var. makuwa OX=1194695 ... [more]
Match NameE-valueIdentityDescription
AT5G58260.11.9e-8180.59oxidoreductases, acting on NADH or NADPH, quinone or similar compound as accepto... [more]
AT5G58260.22.7e-5978.46oxidoreductases, acting on NADH or NADPH, quinone or similar compound as accepto... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020874NAD(P)H-quinone oxidoreductase, subunit NPFAMPF11909NdhNcoord: 70..196
e-value: 5.5E-51
score: 172.3
IPR020874NAD(P)H-quinone oxidoreductase, subunit NPANTHERPTHR35515NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT N, CHLOROPLASTICcoord: 29..197

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0015928.1Sed0015928.1mRNA
Sed0015928.2Sed0015928.2mRNA
Sed0015928.3Sed0015928.3mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050832 defense response to fungus
biological_process GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly
cellular_component GO:0016020 membrane
molecular_function GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function GO:0048038 quinone binding