Sed0015914 (gene) Chayote v1

Overview


Name	Sed0015914
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Zinc finger protein
Location	LG02: 45663195 .. 45663833 (+)
RNA-Seq Expression	Sed0015914
Synteny	Sed0015914

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTTCAGACAAATCCAATGCCTCTAATTCTCAACTCAACTTGCCATGCTCTCTTTCGGTTCTCGATTCGAAACCGAATCGAAAACCAGAAACGGGGACGAAAACGGAGAAAGTGGGCGAACCCCGGCTTTTTCACTGCAAATTTTGTAGTAGAGAGTTTACGAACCTGCAGGCGTTGGGGGGCCATCAAAACGCACATAAGCGAGAAAGAGCCATTGCTAAAAGAGAGAAGGCTGTCGCCGCCGCCGCCACCGCTGCCGCCGCGAGTGGTACGCATATGGGGTCTTTTTACCATCCCTATTACTCGGCATTGGCGGTTCACTCTCTGCGGAACAAAGCCCTCGGGTTCTCGATACGTAAACCGGTTCGGCCCAAAGTAGAACTCTACCGCGCCTCCGCGGGCCATGGCTTCCCTTGGTGGTCGTCGAGAGAACCATACGCAGCAGCGGCGACGGCGACAGCGGCGCAGCAGTTACGGTTTGGAGAATTAGTTCAAGGTGTCAATAATGGTGGAAGTGGATTGGAATCTTTAACGACGGCGAGGAGAAACGGCTCCTCTTCTTCTTCATCATCACAGAATTTTGCTGAGGATCAGTATAATATTCATGGCCTTGATTTGTCCCTCAAACTTTGA

mRNA sequence

ATGTCTTCTTCAGACAAATCCAATGCCTCTAATTCTCAACTCAACTTGCCATGCTCTCTTTCGGTTCTCGATTCGAAACCGAATCGAAAACCAGAAACGGGGACGAAAACGGAGAAAGTGGGCGAACCCCGGCTTTTTCACTGCAAATTTTGTAGTAGAGAGTTTACGAACCTGCAGGCGTTGGGGGGCCATCAAAACGCACATAAGCGAGAAAGAGCCATTGCTAAAAGAGAGAAGGCTGTCGCCGCCGCCGCCACCGCTGCCGCCGCGAGTGGTACGCATATGGGGTCTTTTTACCATCCCTATTACTCGGCATTGGCGGTTCACTCTCTGCGGAACAAAGCCCTCGGGTTCTCGATACGTAAACCGGTTCGGCCCAAAGTAGAACTCTACCGCGCCTCCGCGGGCCATGGCTTCCCTTGGTGGTCGTCGAGAGAACCATACGCAGCAGCGGCGACGGCGACAGCGGCGCAGCAGTTACGGTTTGGAGAATTAGTTCAAGGTGTCAATAATGGTGGAAGTGGATTGGAATCTTTAACGACGGCGAGGAGAAACGGCTCCTCTTCTTCTTCATCATCACAGAATTTTGCTGAGGATCAGTATAATATTCATGGCCTTGATTTGTCCCTCAAACTTTGA

Coding sequence (CDS)

ATGTCTTCTTCAGACAAATCCAATGCCTCTAATTCTCAACTCAACTTGCCATGCTCTCTTTCGGTTCTCGATTCGAAACCGAATCGAAAACCAGAAACGGGGACGAAAACGGAGAAAGTGGGCGAACCCCGGCTTTTTCACTGCAAATTTTGTAGTAGAGAGTTTACGAACCTGCAGGCGTTGGGGGGCCATCAAAACGCACATAAGCGAGAAAGAGCCATTGCTAAAAGAGAGAAGGCTGTCGCCGCCGCCGCCACCGCTGCCGCCGCGAGTGGTACGCATATGGGGTCTTTTTACCATCCCTATTACTCGGCATTGGCGGTTCACTCTCTGCGGAACAAAGCCCTCGGGTTCTCGATACGTAAACCGGTTCGGCCCAAAGTAGAACTCTACCGCGCCTCCGCGGGCCATGGCTTCCCTTGGTGGTCGTCGAGAGAACCATACGCAGCAGCGGCGACGGCGACAGCGGCGCAGCAGTTACGGTTTGGAGAATTAGTTCAAGGTGTCAATAATGGTGGAAGTGGATTGGAATCTTTAACGACGGCGAGGAGAAACGGCTCCTCTTCTTCTTCATCATCACAGAATTTTGCTGAGGATCAGTATAATATTCATGGCCTTGATTTGTCCCTCAAACTTTGA

Protein sequence

MSSSDKSNASNSQLNLPCSLSVLDSKPNRKPETGTKTEKVGEPRLFHCKFCSREFTNLQALGGHQNAHKRERAIAKREKAVAAAATAAAASGTHMGSFYHPYYSALAVHSLRNKALGFSIRKPVRPKVELYRASAGHGFPWWSSREPYAAAATATAAQQLRFGELVQGVNNGGSGLESLTTARRNGSSSSSSSQNFAEDQYNIHGLDLSLKL

Homology

[Close]

BLAST of Sed0015914 vs. NCBI nr
Match: XP_023528967.1 (zinc finger protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204.9 bits (520), Expect = 6.8e-49
Identity = 135/234 (57.69%), Postives = 155/234 (66.24%), Query Frame = 0


Query: 1   MSSSDKSNASNSQLNLPCSLSVLDSKPNRK---PETGTKTEKVGEPRLFHCKFCSREFTN 60
           M+SS KS  S  +LNL  S  VL ++P  +      GT+T    E R+F+CKFCSR+F+N
Sbjct: 1   MASSGKSEGSEVELNLQHSFKVLKAEPGFEEVGTAMGTETRTKRETRVFYCKFCSRKFSN 60

Query: 61  LQALGGHQNAHKRERAIAKREKAVAAAA---------TAAAASGT----HMGSFYHPYYS 120
           LQALGGHQNAHKRER IAKREKAVAAAA         TAAAA+ T     +GSFYHPYYS
Sbjct: 61  LQALGGHQNAHKRERDIAKREKAVAAAAAAMSFRTTTTAAAATSTDAFDSIGSFYHPYYS 120

Query: 121 ALAVHSLRNKALGFSIRKPVRPKVELYRASAGHGFPWWSSREPYAAAATATAAQQLRFGE 180
           A+A+ SLRNKALGF IR P+R    L   +  HG  WW  RE Y AAA   AAQQL FG 
Sbjct: 121 AMAIQSLRNKALGFPIRPPIRKPTRL--QAVAHGCRWW-PREQYMAAA---AAQQLHFGG 180

Query: 181 LVQGVNNGG------SGLESLTTARRNGSSSSSSSQNFAEDQYNIHGLDLSLKL 213
           L Q  NNGG      + LES+  A RN +SSSSSSQ F  DQYNIHGLDL+LKL
Sbjct: 181 LWQAANNGGRENLAATELESIAMASRN-ASSSSSSQIFGADQYNIHGLDLTLKL 227

[Close]

BLAST of Sed0015914 vs. NCBI nr
Match: KAG7017633.1 (Zinc finger protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 195.7 bits (496), Expect = 4.1e-46
Identity = 129/235 (54.89%), Postives = 150/235 (63.83%), Query Frame = 0


Query: 1   MSSSDKSNASNSQLNLPCSLSVLDSKPNRK---PETGTKTEKVGEPRLFHCKFCSREFTN 60
           M+SS +   S  +LNL  S  VL ++P  +      GT+T    E R+F+CKFCSR+F+N
Sbjct: 1   MASSGECEGSEVELNLQHSFKVLKAEPGFEEVGTAMGTETRTKRETRVFYCKFCSRKFSN 60

Query: 61  LQALGGHQNAHKRERAIAKREKAVAAAA--------TAAAASGT------HMGSFYHPYY 120
           LQALGGHQNAHKRER IAKREKAVAAAA        TAAAA+ T       +GSFYHPYY
Sbjct: 61  LQALGGHQNAHKRERDIAKREKAVAAAAAAMSFRTTTAAAAAATSTDAFDSIGSFYHPYY 120

Query: 121 SALAVHSLRNKALGFSIRKPVRPKVELYRASAGHGFPWWSSREPYAAAATATAAQQLRFG 180
           SA+A+HSLRNKALGF IR P+R        +  HG  WW  RE Y AA    AAQQL FG
Sbjct: 121 SAMAIHSLRNKALGFPIRPPIRKPTR--PQAVAHGCRWW-PREQYMAA----AAQQLHFG 180

Query: 181 ELVQGVNNGG------SGLESLTTARRNGSSSSSSSQNFAEDQYNIHGLDLSLKL 213
            L Q  NNGG      + LES+  A RN    +SSSQ F  DQYNIHGLDL+LKL
Sbjct: 181 GLWQAANNGGRENSAATDLESIAMASRN----ASSSQIFGADQYNIHGLDLTLKL 224

[Close]

BLAST of Sed0015914 vs. NCBI nr
Match: KAG6580877.1 (Zinc finger protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.4 bits (490), Expect = 2.1e-45
Identity = 128/236 (54.24%), Postives = 149/236 (63.14%), Query Frame = 0


Query: 1   MSSSDKSNASNSQLNLPCSLSVLDSKPNRK---PETGTKTEKVGEPRLFHCKFCSREFTN 60
           M+SS +   S  +LNL  S  VL ++P  +      GT+T    E R+F+CKFCSR+F+N
Sbjct: 1   MASSGECEGSEVELNLQHSFKVLKAEPGFEEVGTAMGTETRTKRETRVFYCKFCSRKFSN 60

Query: 61  LQALGGHQNAHKRERAIAKREKAVAA-----------AATAAAASGT----HMGSFYHPY 120
           LQALGGHQNAHKRER IAKREKAVAA           AA AAAA+ T     +GSFYHPY
Sbjct: 61  LQALGGHQNAHKRERDIAKREKAVAAAAAAMSFRTTTAAAAAAATSTDAFDSIGSFYHPY 120

Query: 121 YSALAVHSLRNKALGFSIRKPVRPKVELYRASAGHGFPWWSSREPYAAAATATAAQQLRF 180
           YSA+A+HSLRNKALGF IR P+R        +  HG  WW  RE Y AA    AAQQL F
Sbjct: 121 YSAMAIHSLRNKALGFPIRPPIRKPTR--PQAVAHGCRWW-PREQYMAA----AAQQLHF 180

Query: 181 GELVQGVNNGG------SGLESLTTARRNGSSSSSSSQNFAEDQYNIHGLDLSLKL 213
           G L Q  NNGG      + LES+  A RN    +SSSQ F  DQYNIHGLDL+LKL
Sbjct: 181 GGLWQAANNGGRENSAATDLESIAMASRN----ASSSQIFGADQYNIHGLDLTLKL 225

[Close]

BLAST of Sed0015914 vs. NCBI nr
Match: XP_022934598.1 (zinc finger protein 1-like [Cucurbita moschata])

HSP 1 Score: 192.2 bits (487), Expect = 4.6e-45
Identity = 127/235 (54.04%), Postives = 150/235 (63.83%), Query Frame = 0


Query: 1   MSSSDKSNASNSQLNLPCSLSVLDSKPNRK---PETGTKTEKVGEPRLFHCKFCSREFTN 60
           M+ S +   S  +LNL  S  VL ++P  +      GT+T    E R+F+CKFCSR+F+N
Sbjct: 1   MACSGECEGSEVELNLKHSFKVLKAEPGFEEAGTAMGTETRTKRETRVFYCKFCSRKFSN 60

Query: 61  LQALGGHQNAHKRERAIAKREKAVAAAA--------TAAAASGT------HMGSFYHPYY 120
           LQALGGHQNAHKRER IAKREKAVAAAA        TAAAA+ T       +GSFYHPYY
Sbjct: 61  LQALGGHQNAHKRERDIAKREKAVAAAAAAMSFRTTTAAAAAATTTGAFDSIGSFYHPYY 120

Query: 121 SALAVHSLRNKALGFSIRKPVRPKVELYRASAGHGFPWWSSREPYAAAATATAAQQLRFG 180
           SA+A+H+LRNKALGF IR P+R        +  HG  WW  RE Y A     AAQQL FG
Sbjct: 121 SAMAIHALRNKALGFPIRPPIRKPTR--PQAVAHGCRWW-PREQYMA-----AAQQLHFG 180

Query: 181 ELVQGVNNGG------SGLESLTTARRNGSSSSSSSQNFAEDQYNIHGLDLSLKL 213
            L Q  NNGG      + LES+  A RN  ++SSSSQ F  DQYNIHGLDL+LKL
Sbjct: 181 GLWQAANNGGRENLATTELESIAMASRN--ATSSSSQIFGADQYNIHGLDLTLKL 225

[Close]

BLAST of Sed0015914 vs. NCBI nr
Match: XP_004136633.1 (zinc finger protein 1 [Cucumis sativus] >KGN59425.1 hypothetical protein Csa_001317 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 1.0e-44
Identity = 124/225 (55.11%), Postives = 150/225 (66.67%), Query Frame = 0


Query: 1   MSSSDKS-NASNSQLNL-PCSLSVLDSKPNRKPETGTKTEKVGEPRLFHCKFCSREFTNL 60
           MSSSDK  N+ +   N    S  V +S+  ++PET TKT+   E R+F+CKFCSR+F+NL
Sbjct: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTK--DETRVFYCKFCSRKFSNL 60

Query: 61  QALGGHQNAHKRERAIAKREKAVAAAATAAAASG---THMGSFYHPYYSALAVHSLRNKA 120
           QALGGHQNAHKRER IAKREKA AAAA A   +      +GSFYHPYYSA+A+H LRNK+
Sbjct: 61  QALGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKS 120

Query: 121 LGFS------IRKPVRPKVEL--YRASAGHGFPWWSSREPYAAAATATAAQQLRFGELVQ 180
            G        IRKP R +VEL     +A +G+ WW  RE Y AAA     QQ++ G L+Q
Sbjct: 121 PGIPIRPQSVIRKPSRSRVELGGGATAAAYGYRWW-PREQYLAAAVVAQQQQIQSGGLLQ 180

Query: 181 GVNNGGSGLESLTTARRNGSSSSSSSQNFAEDQYNIHGLDLSLKL 213
           GVNN   G  S+  A RN SSSSSSSQ F  DQY ++GLDLSLKL
Sbjct: 181 GVNN---GFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL 219

[Close]

BLAST of Sed0015914 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.7e-11
Identity = 49/130 (37.69%), Postives = 68/130 (52.31%), Query Frame = 0


Query: 10  SNSQLNLPCSLSVLDSKPNRKPETGTKTEKVGEPRLFHCKFCSREFTNLQALGGHQNAHK 69
           S+ +LNL   +  +D   +   E+ T TE+    +LF C +C R F + QALGGHQNAHK
Sbjct: 32  SSHELNL---IDCIDDTTSIVNESTTSTEQ----KLFSCNYCQRTFYSSQALGGHQNAHK 91

Query: 70  RERAIAKREKAVAAAATAAAASGTHMGSFYHPY-YSALAVHSLRNKALGFSIR-KPVRPK 129
           RER +AKR + +AA+A+A          F HPY +S L  H   N      I+   +  K
Sbjct: 92  RERTLAKRGQRMAASASA----------FGHPYGFSPLPFHGQYNNHRSLGIQAHSISHK 144

Query: 130 VELYRASAGH 138
           +  Y    GH
Sbjct: 152 LSSYNGFGGH 144

[Close]

BLAST of Sed0015914 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.7e-08
Identity = 42/96 (43.75%), Postives = 51/96 (53.12%), Query Frame = 0


Query: 9   ASNSQLNLPCSLSV-LDSKPNRKPETGTKTEKV-GEPRLFHCKFCSREFTNLQALGGHQN 68
           +SN  L+ P S  V LD K N      TK+ K    PR+F C +C R+F + QALGGHQN
Sbjct: 20  SSNQDLSKPESNHVSLDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGHQN 79

Query: 69  AHKRERAIAKREKAVAAAATAAAASGTHMGSFYHPY 103
           AHKRER +AKR          A   G   G  + PY
Sbjct: 80  AHKRERTMAKR----------AMHMGRMFGHHHRPY 105

[Close]

BLAST of Sed0015914 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.0e-07
Identity = 30/69 (43.48%), Postives = 44/69 (63.77%), Query Frame = 0


Query: 14 LNLPCSLSVLDSKPNRKPETGTKTEKVGEPRLFHCKFCSREFTNLQALGGHQNAHKRERA 73
          +NL  + SV +     +P +G+ +E     R + C++C REF N QALGGHQNAHK+ER 
Sbjct: 13 INLLETTSVQNQSSEPRPGSGSGSES----RKYECQYCCREFANSQALGGHQNAHKKERQ 72

Query: 74 IAKREKAVA 83
          + KR + +A
Sbjct: 73 LLKRAQMLA 77

[Close]

BLAST of Sed0015914 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 3.0e-07
Identity = 40/105 (38.10%), Postives = 56/105 (53.33%), Query Frame = 0


Query: 2   SSSDKSNASNSQLNLPCSLSVLDSKPNRKPETGTKTEKVGEPRLFHCKFCSREFTNLQAL 61
           ++++  +  +S L LP S +   S P ++ +      K    R+F C +C R+F + QAL
Sbjct: 45  NNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQPSVSK----RVFSCNYCQRKFYSSQAL 104

Query: 62  GGHQNAHKRERAIAKREKAV---------------AAAATAAAAS 92
           GGHQNAHKRER +AKR   +               AAAATAAA S
Sbjct: 105 GGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAAALS 145

[Close]

BLAST of Sed0015914 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.1e-07
Identity = 63/214 (29.44%), Postives = 98/214 (45.79%), Query Frame = 0


Query: 6   KSNASNSQLNLPCSLSVLDSKPNRKPETGTKTEKVGEPRLFHCKFCSREFTNLQALGGHQ 65
           +  A++S+LNL  S     S  +       + E++ +PR+F C +C R+F + QALGGHQ
Sbjct: 31  RGTATSSELNLIDSFKTSSSSTSHHQH---QQEQLADPRVFSCNYCQRKFYSSQALGGHQ 90

Query: 66  NAHKRERAIAKR---EKAVAAAATAAAASGTHMGSFYHPYYSALAVH-SLRNKA-LGFSI 125
           NAHKRER +AKR    K   ++  ++A +  H         ++L +H S+ N++ LG   
Sbjct: 91  NAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRSTLGIQA 150

Query: 126 RKPVRPKVELYR--ASAGHGFPWWSSREPYAAAATATAAQQLRFGELVQGVNNGGSGLES 185
              +     L R   S  H F     ++P     T       +F   V G NN      +
Sbjct: 151 HSTIHKPSFLGRQTTSLSHVFKQSIHQKP-----TIGKMLPEKFHLEVAGNNN-----SN 210

Query: 186 LTTARRNGSSSSSSSQNFAEDQYNIHGLDLSLKL 213
           +  A+        S+Q   ED      +DL+LKL
Sbjct: 211 MVAAKLERIGHFKSNQ---EDHNQFKKIDLTLKL 228

[Close]

BLAST of Sed0015914 vs. ExPASy TrEMBL
Match: A0A6J1F842 (zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111441732 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.2e-45
Identity = 127/235 (54.04%), Postives = 150/235 (63.83%), Query Frame = 0


Query: 1   MSSSDKSNASNSQLNLPCSLSVLDSKPNRK---PETGTKTEKVGEPRLFHCKFCSREFTN 60
           M+ S +   S  +LNL  S  VL ++P  +      GT+T    E R+F+CKFCSR+F+N
Sbjct: 1   MACSGECEGSEVELNLKHSFKVLKAEPGFEEAGTAMGTETRTKRETRVFYCKFCSRKFSN 60

Query: 61  LQALGGHQNAHKRERAIAKREKAVAAAA--------TAAAASGT------HMGSFYHPYY 120
           LQALGGHQNAHKRER IAKREKAVAAAA        TAAAA+ T       +GSFYHPYY
Sbjct: 61  LQALGGHQNAHKRERDIAKREKAVAAAAAAMSFRTTTAAAAAATTTGAFDSIGSFYHPYY 120

Query: 121 SALAVHSLRNKALGFSIRKPVRPKVELYRASAGHGFPWWSSREPYAAAATATAAQQLRFG 180
           SA+A+H+LRNKALGF IR P+R        +  HG  WW  RE Y A     AAQQL FG
Sbjct: 121 SAMAIHALRNKALGFPIRPPIRKPTR--PQAVAHGCRWW-PREQYMA-----AAQQLHFG 180

Query: 181 ELVQGVNNGG------SGLESLTTARRNGSSSSSSSQNFAEDQYNIHGLDLSLKL 213
            L Q  NNGG      + LES+  A RN  ++SSSSQ F  DQYNIHGLDL+LKL
Sbjct: 181 GLWQAANNGGRENLATTELESIAMASRN--ATSSSSQIFGADQYNIHGLDLTLKL 225

[Close]

BLAST of Sed0015914 vs. ExPASy TrEMBL
Match: A0A0A0LBM7 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G819820 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 4.9e-45
Identity = 124/225 (55.11%), Postives = 150/225 (66.67%), Query Frame = 0


Query: 1   MSSSDKS-NASNSQLNL-PCSLSVLDSKPNRKPETGTKTEKVGEPRLFHCKFCSREFTNL 60
           MSSSDK  N+ +   N    S  V +S+  ++PET TKT+   E R+F+CKFCSR+F+NL
Sbjct: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTK--DETRVFYCKFCSRKFSNL 60

Query: 61  QALGGHQNAHKRERAIAKREKAVAAAATAAAASG---THMGSFYHPYYSALAVHSLRNKA 120
           QALGGHQNAHKRER IAKREKA AAAA A   +      +GSFYHPYYSA+A+H LRNK+
Sbjct: 61  QALGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKS 120

Query: 121 LGFS------IRKPVRPKVEL--YRASAGHGFPWWSSREPYAAAATATAAQQLRFGELVQ 180
            G        IRKP R +VEL     +A +G+ WW  RE Y AAA     QQ++ G L+Q
Sbjct: 121 PGIPIRPQSVIRKPSRSRVELGGGATAAAYGYRWW-PREQYLAAAVVAQQQQIQSGGLLQ 180

Query: 181 GVNNGGSGLESLTTARRNGSSSSSSSQNFAEDQYNIHGLDLSLKL 213
           GVNN   G  S+  A RN SSSSSSSQ F  DQY ++GLDLSLKL
Sbjct: 181 GVNN---GFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL 219

[Close]

BLAST of Sed0015914 vs. ExPASy TrEMBL
Match: A0A5D3DPN0 (Zinc finger protein GIS-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006570 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.5e-41
Identity = 120/230 (52.17%), Postives = 146/230 (63.48%), Query Frame = 0


Query: 1   MSSSDKSNASNSQLNLPCSLSVLDSKPNRKPETGTKTEKVGEPRLFHCKFCSREFTNLQA 60
           MSSSDKSNAS+ + N     +    K + +PET  K ++  E R+F+CKFCSR F+NLQA
Sbjct: 1   MSSSDKSNASDHERN----YNQDSFKESEQPETEAKAKE--ETRVFYCKFCSRNFSNLQA 60

Query: 61  LGGHQNAHKRERAIAKREKAVAAAATAAAASG---THMGSFYHPYYSALAVHSLRNKALG 120
           LGGHQNAHKRER IAKREKA AAAA A   +      +GSFYHPYYS +A+HSLRNK+ G
Sbjct: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDVFDSIGSFYHPYYSVMAIHSLRNKSPG 120

Query: 121 FS------IRKPVRPKVEL---------YRASAGHGFPWWSSREPYAAAATATAAQQLRF 180
           F       IRKP R +VEL           A+A +G+ WW  RE Y AA  A   QQ++ 
Sbjct: 121 FPIRPQSVIRKPSRSRVELSGGGATAAAAAAAAAYGYRWW-PREQYMAALAAAQQQQIQS 180

Query: 181 GELVQGVNNGGSGLESLTTARRNGSSSSSSSQNFAEDQYNIHGLDLSLKL 213
           G L+QG NN   G ES+     N +SSSSS Q F  DQ  ++GLDLSLKL
Sbjct: 181 GGLLQGFNN---GFESIAMENIN-ASSSSSPQIFGADQCIVNGLDLSLKL 219

[Close]

BLAST of Sed0015914 vs. ExPASy TrEMBL
Match: E5GBP2 (Zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.5e-41
Identity = 120/230 (52.17%), Postives = 146/230 (63.48%), Query Frame = 0


Query: 1   MSSSDKSNASNSQLNLPCSLSVLDSKPNRKPETGTKTEKVGEPRLFHCKFCSREFTNLQA 60
           MSSSDKSNAS+ + N     +    K + +PET  K ++  E R+F+CKFCSR F+NLQA
Sbjct: 1   MSSSDKSNASDHERN----YNQDSFKESEQPETEAKAKE--ETRVFYCKFCSRNFSNLQA 60

Query: 61  LGGHQNAHKRERAIAKREKAVAAAATAAAASG---THMGSFYHPYYSALAVHSLRNKALG 120
           LGGHQNAHKRER IAKREKA AAAA A   +      +GSFYHPYYS +A+HSLRNK+ G
Sbjct: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDVFDSIGSFYHPYYSVMAIHSLRNKSPG 120

Query: 121 FS------IRKPVRPKVEL---------YRASAGHGFPWWSSREPYAAAATATAAQQLRF 180
           F       IRKP R +VEL           A+A +G+ WW  RE Y AA  A   QQ++ 
Sbjct: 121 FPIRPQSVIRKPSRSRVELSGGGATAAAAAAAAAYGYRWW-PREQYMAALAAAQQQQIQS 180

Query: 181 GELVQGVNNGGSGLESLTTARRNGSSSSSSSQNFAEDQYNIHGLDLSLKL 213
           G L+QG NN   G ES+     N +SSSSS Q F  DQ  ++GLDLSLKL
Sbjct: 181 GGLLQGFNN---GFESIAMENIN-ASSSSSPQIFGADQCIVNGLDLSLKL 219

[Close]

BLAST of Sed0015914 vs. ExPASy TrEMBL
Match: A0A1S3B7Y9 (uncharacterized protein LOC103487164 OS=Cucumis melo OX=3656 GN=LOC103487164 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.5e-41
Identity = 120/230 (52.17%), Postives = 146/230 (63.48%), Query Frame = 0


Query: 1   MSSSDKSNASNSQLNLPCSLSVLDSKPNRKPETGTKTEKVGEPRLFHCKFCSREFTNLQA 60
           MSSSDKSNAS+ + N     +    K + +PET  K ++  E R+F+CKFCSR F+NLQA
Sbjct: 1   MSSSDKSNASDHERN----YNQDSFKESEQPETEAKAKE--ETRVFYCKFCSRNFSNLQA 60

Query: 61  LGGHQNAHKRERAIAKREKAVAAAATAAAASG---THMGSFYHPYYSALAVHSLRNKALG 120
           LGGHQNAHKRER IAKREKA AAAA A   +      +GSFYHPYYS +A+HSLRNK+ G
Sbjct: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDVFDSIGSFYHPYYSVMAIHSLRNKSPG 120

Query: 121 FS------IRKPVRPKVEL---------YRASAGHGFPWWSSREPYAAAATATAAQQLRF 180
           F       IRKP R +VEL           A+A +G+ WW  RE Y AA  A   QQ++ 
Sbjct: 121 FPIRPQSVIRKPSRSRVELSGGGATAAAAAAAAAYGYRWW-PREQYMAALAAAQQQQIQS 180

Query: 181 GELVQGVNNGGSGLESLTTARRNGSSSSSSSQNFAEDQYNIHGLDLSLKL 213
           G L+QG NN   G ES+     N +SSSSS Q F  DQ  ++GLDLSLKL
Sbjct: 181 GGLLQGFNN---GFESIAMENIN-ASSSSSPQIFGADQCIVNGLDLSLKL 219

[Close]

BLAST of Sed0015914 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 68.9 bits (167), Expect = 5.4e-12
Identity = 49/130 (37.69%), Postives = 68/130 (52.31%), Query Frame = 0


Query: 10  SNSQLNLPCSLSVLDSKPNRKPETGTKTEKVGEPRLFHCKFCSREFTNLQALGGHQNAHK 69
           S+ +LNL   +  +D   +   E+ T TE+    +LF C +C R F + QALGGHQNAHK
Sbjct: 32  SSHELNL---IDCIDDTTSIVNESTTSTEQ----KLFSCNYCQRTFYSSQALGGHQNAHK 91

Query: 70  RERAIAKREKAVAAAATAAAASGTHMGSFYHPY-YSALAVHSLRNKALGFSIR-KPVRPK 129
           RER +AKR + +AA+A+A          F HPY +S L  H   N      I+   +  K
Sbjct: 92  RERTLAKRGQRMAASASA----------FGHPYGFSPLPFHGQYNNHRSLGIQAHSISHK 144

Query: 130 VELYRASAGH 138
           +  Y    GH
Sbjct: 152 LSSYNGFGGH 144

[Close]

BLAST of Sed0015914 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-09
Identity = 42/96 (43.75%), Postives = 51/96 (53.12%), Query Frame = 0


Query: 9   ASNSQLNLPCSLSV-LDSKPNRKPETGTKTEKV-GEPRLFHCKFCSREFTNLQALGGHQN 68
           +SN  L+ P S  V LD K N      TK+ K    PR+F C +C R+F + QALGGHQN
Sbjct: 20  SSNQDLSKPESNHVSLDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGHQN 79

Query: 69  AHKRERAIAKREKAVAAAATAAAASGTHMGSFYHPY 103
           AHKRER +AKR          A   G   G  + PY
Sbjct: 80  AHKRERTMAKR----------AMHMGRMFGHHHRPY 105

[Close]

BLAST of Sed0015914 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 2.5e-09
Identity = 41/113 (36.28%), Postives = 58/113 (51.33%), Query Frame = 0


Query: 11  NSQLNLPCSLSVLDSKPNRKPETGTKTEKVGEPRLFHCKFCSREFTNLQALGGHQNAHKR 70
           N +LNL   L      P+    T T      E +LF C +C R F + QALGGHQNAHKR
Sbjct: 75  NQELNLLDCLETGVVTPSFNGSTST------EQKLFSCNYCQRTFYSSQALGGHQNAHKR 134

Query: 71  ERAIAKREKAVAAAATAAAASGTHMGSFYHPYYS---ALAVHSLRNKALGFSI 121
           ER +AKR + +A+AA      G     F+  Y +    +  HS+ +K   +++
Sbjct: 135 ERTLAKRGQRMASAAAFGHPYGFAPVPFHGQYSNRTLGIQAHSMSHKPSSYNV 181

[Close]

BLAST of Sed0015914 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 )

HSP 1 Score: 58.5 bits (140), Expect = 7.3e-09
Identity = 30/69 (43.48%), Postives = 44/69 (63.77%), Query Frame = 0


Query: 14 LNLPCSLSVLDSKPNRKPETGTKTEKVGEPRLFHCKFCSREFTNLQALGGHQNAHKRERA 73
          +NL  + SV +     +P +G+ +E     R + C++C REF N QALGGHQNAHK+ER 
Sbjct: 13 INLLETTSVQNQSSEPRPGSGSGSES----RKYECQYCCREFANSQALGGHQNAHKKERQ 72

Query: 74 IAKREKAVA 83
          + KR + +A
Sbjct: 73 LLKRAQMLA 77

[Close]

BLAST of Sed0015914 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 57.0 bits (136), Expect = 2.1e-08
Identity = 40/105 (38.10%), Postives = 56/105 (53.33%), Query Frame = 0


Query: 2   SSSDKSNASNSQLNLPCSLSVLDSKPNRKPETGTKTEKVGEPRLFHCKFCSREFTNLQAL 61
           ++++  +  +S L LP S +   S P ++ +      K    R+F C +C R+F + QAL
Sbjct: 45  NNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQPSVSK----RVFSCNYCQRKFYSSQAL 104

Query: 62  GGHQNAHKRERAIAKREKAV---------------AAAATAAAAS 92
           GGHQNAHKRER +AKR   +               AAAATAAA S
Sbjct: 105 GGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAAALS 145

The following BLAST results are available for this feature:

BLAST of Sed0015914 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528967.1	6.8e-49	57.69	zinc finger protein 1-like [Cucurbita pepo subsp. pepo]	[more]
KAG7017633.1	4.1e-46	54.89	Zinc finger protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6580877.1	2.1e-45	54.24	Zinc finger protein 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022934598.1	4.6e-45	54.04	zinc finger protein 1-like [Cucurbita moschata]	[more]
XP_004136633.1	1.0e-44	55.11	zinc finger protein 1 [Cucumis sativus] >KGN59425.1 hypothetical protein Csa_001...	[more]

BLAST of Sed0015914 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39262	7.7e-11	37.69	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q39266	2.7e-08	43.75	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q39265	1.0e-07	43.48	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1	[more]
Q39263	3.0e-07	38.10	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q42485	5.1e-07	29.44	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]

BLAST of Sed0015914 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F842	2.2e-45	54.04	zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111441732 PE=4 SV...	[more]
A0A0A0LBM7	4.9e-45	55.11	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G819820 P...	[more]
A0A5D3DPN0	2.5e-41	52.17	Zinc finger protein GIS-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
E5GBP2	2.5e-41	52.17	Zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3B7Y9	2.5e-41	52.17	uncharacterized protein LOC103487164 OS=Cucumis melo OX=3656 GN=LOC103487164 PE=...	[more]

BLAST of Sed0015914 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25160.1	5.4e-12	37.69	zinc finger protein 3	[more]
AT1G24625.1	1.9e-09	43.75	zinc finger protein 7	[more]
AT5G10970.1	2.5e-09	36.28	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G67030.1	7.3e-09	43.48	zinc finger protein 6	[more]
AT1G66140.1	2.1e-08	38.10	zinc finger protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 26..95 e-value: 3.2E-6 score: 28.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
IPR044246	Zinc finger protein 3-like	PANTHER	PTHR47287	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 4..212
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 48..68
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 46..73 score: 11.219034
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 44..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015914.1	Sed0015914.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway