Sed0015910 (gene) Chayote v1

Overview


Name	Sed0015910
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pectin lyase-like superfamily protein
Location	LG05: 46137307 .. 46141488 (+)
RNA-Seq Expression	Sed0015910
Synteny	Sed0015910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAAGAGCAATATGTGCATTGTCCAGCAGGTGTGGTTCCCCTTCCGTTTCTCCTCCGACATTGATGTCCATAAGCCCCAAATTGTGAGGACGCACTGTTCCATTCTGAATCTATGGAGGGTGATCAGAAATGGAGTTTGGGTGCTGTTGTGATGAAGCGGCCCTCAACCTCATGGTCCTCTCTTCTCCTTTTGTTGGTGTTCATCGCTTTTGTGACCCTCCAAATCGCCACCAGAACCCCTTTCCCCGTGTGGGCCGCCCAACCCCCGCCCCCTTCCCACGAGCCCTCCTGCGCCGCCTTCTTCCGGCGGGATGAGGCCGCCGCGCCCCTGGTGGTGATGTCCATTGCGGATTTCGGAGGCGTGGGCGACGGCAGGACCTCCAACACGGAGGCGTTCCGGAAGGCCATTCATTACATGCGCCGCTTCGCCCACCATGGCGGCTCCACACTGAGCCTCCCCCCCGGCACCTGGCTCACCGGCTCTTTTAATCTCACCTCTAATTTCACCCTTTTCCTTCAACCTGGCGCCATTCTTCTGGCCTCCCAGGTACTCCCTCCCTCTTTGCCTTCCATTTTTTTATATACTTTTCCTTCGTTACATTCAATGATCAGGGTTTAATCTATGCTAATCCAATTCCAACTTACTTTTTCAACCGTTCCTTCTCAAAACTGTAGTATATGAAATCAATTTTAATCTCATTCAACTTGTTTTCTTATTTCTTACAAAGAACAAAACTTTGTGATTCTGGACAAGAAAAATGCCAAATGGGCATTCAAAACTTAACTTCCTACAAAACCAAAAGTCAGAAGCCTCACTCTGGCGGTGTCACCTAGGTTGTTTTTTCATTTATTTTTAACCAAAAAATATGCCCAAATGGCCCCCCCCCCCCCCCCCACATTTCTCTTACTAATAATAATAATAATAATAAACAGTCCAATAATAATAGCTATTAAAAAAAAAAAAAGCAGCGAAATTAGGAAGGAAAAAATTTGCGCGCTTTATTGCATTTTATGAATCATCATTCAATGCATTTGAAATTGTGTTTCAAACGCTGCCCATGTTCATCGCCATTTCTGTTACATGATTTCAACTTTTTGGTTACATTTTTTTAACTTAAAATATTGTTCTACTTGTTCTACTACCTTTATGGTTAACTTTTTCAAGAATATGGTTCTTTTATTTTATTTTATTAAATTGGATAAGGTGTCAAAAATAAACTAGTATGGATTAGTTTAAGAGAAAATGATCAACTTTGTTCGGATTTTAGTTTAAGTGCGTGTAAATGGCTCGGACTCAAAAACAAAGTTCAAATTAAAGTGAAGATAAAAGACTAATTTTAAGATTTCTTGTAAATAAAATAAATTTGGGCTATCAAAAAAATATAACAGAGGGTCAAAAATCTTGTTTTAATCAAAATTTATTAAATTCTATTTTATGTTATAGAGATTCTCTTGGGCAAATGAAAAAAACAAATTAATTGTAAATTCCTTTCTCCAAGTGGTGTGTACATGGAAACAGAGCTTTTATGATAAGTAGTTGACTTTTTTTATGGGGTAGTTTTTTGAAATTGAATGAGCTGTGGTTGAATGAACAAAACAAGAGATCAAATTCAAATTGATTAAGGTTTCTTTATCAATTAGGGTGCCATGTTAGTGTCAAAAGCTCTGTTTTAAAAATATTTAATTTGTATTTAAAAAAATGAATATAGGATCCAGATGAGTGGCCCATTATAGAGCCACTACCTTCATATGGAAGAGGAAGAGAGAGATTGGGAGGGAGACACATTAGCCTTATTCATGGCAATGGTCTTTCCAATGTTGTCATTACAGGTACCCTCCCACTTTGCCTTCCATTTTTTTAATCTTCTTTTTCATTTCTTATATATGTTATTTGGCTCCATCTTCATTGTTAGGATTTTATATTCATGAAGATTCTTGGATTTTGTAAAGTAATGGAATGGTACTTTTATCTTGTCAATGGTGCCATTCATATAGTTTGATCATGACAAAACCATTAAGAGACAGGATAAGAAGAAATATTTGATTATAGGGCCCATTTGATACCATTCCTTGTTTTTAAAGATTGTGTTTTGCTATTGGTTTTTATGGTTTTCTAATGTAATATATATATATGTTTTAGATCCTTCCTAAAATTTGAGTAGTTTAGTAAGGGTTGATCTACTCATTATAAGCTTGCCTGAACAACTCACAAATATGAATAAACAAAAATGAAAAAAAAAAAATCCTTGCCAAAATTTGCTTAGTTTAAAAAAAGATATGCTTTGTTGGAGTTTGGGAGTGATTTTATCATTTCAAATAGTGAAGTTTTTAATAAAGAAGATTTGGTGAAGATTTCTTTATAATGTGAGAAACAAAGTAGTCAAACTAATCATCATAAACTATGCGCTATTACATTTGGTTGTTAAGAAGGTATAGTAAGTGTTTATATCAAGTGATCATTCTAAGGTGGGAAAAGTTAGGACTTGAAGTTGAATCTAAAGCATAAGATGCATGTTCTAAGACCACTCGACTTGACCCTAGTCCCTATGTATTCCCATTCCGTGACTTGTTTTTCATCCGCTGAAATACCACTAGGCCAATCCATAAAGGTTATGCATAAGAAGTTCTTACGAACTTAAAATTTTATAAGTAGGAAAAAAGAAACAAAATACTTATGAAATGGAGTCCTAACTTTTGATCTACATCGAGCAAGGAAATAGCGTGAGCTCTTTTGTTAGAACTCATATCGAAGTCTTCTCGTTTAGCTTCGGGTTCGACAATGTTCTATATTATGGAAATTTGATGAGTTGTGTGAATTTTTCCAGGAGAGAATGGAACTATTGATGGTCAGGGCAAGATGTGGTGGGAGCTATGGTGGAACAGAACATTGAATCACACAAGAGGCCATCTTGTGGAATTCATGAACTCTCACAACATTCTCATCTCCAATCTCACCTTCAAAAATTCTCCCTTCTGGACTGTCCATCCTGTCTATTGCAGGTTTCAATATCGATTTTTCGATTAAAGTTATGAACATTTAGAAGGACTTGTAATAGGCTCCTAAACTTCTCTTTGCTGTTTTGTTTCAGCAATGTTGTCATAAAAAACATGACGATCCTCGCTCCCCTCAATGCCCCGAACACTGACGGTATCGACCCAGGTATAGCTTCTTTTGTAGATTATGCATCCAATTGAGATGTATAAGAAATAAAAACATTGGTGAAGTTCTGAACTTTAAATGCTCATGTTATGCTTTAGATTCGAGTACCAATATATGTATCGAGGACTGTTACATTGAGAGCGGAGATGATCTAGTTGCAGTGAAAAGTGGATGGGATCATTATGGAATCAAACTTGCACGTCCGAGCTCGAACATCATAATAAGGCGAGTGTCTGGCACCACTCCAACCTGTTCTGGTGTCGGAATAGGAAGCGAGATGTCGGGTGGAATATCAAACATTACGATTGAGGATTTAAACATTTGGGATTCGGCAGCTGGCATTCGCATCAAATCCGACCAAGGAAGAGGAGGGTACATTGCAAATGTTAGTATAAGCAACATTGTAATGAACAGAGTGAAAATGGCTATCAGGTTCAGCAGGGGTTCAAATGACCATCCTGATGAGAAATGGGATCCAAAGGCAGTTCCCAAAGTGAAGGGTATTTTCATTAGCAACATCACGAGCTTAAATTCGACAAAGGCTCCTGTTCTCGATGGCATTAAGGGCACGTTGTATGATGGGGTATGCATGAAAAATGTCACCATTCTCGGCCTTGCTCCCTCCGCAAAATGGCATTGTGCTTTCGTGTTGGGTTTTAGCAGTGCAGTCTTTCCTACGCCATGTCCTCAGTTGCAGAACATCACATTCTCATCGCTGTGCGCATAATTTTAAACCACCACAGACACAGTTTTGCAAACTTTGGGTGCCACATGAGACCAAGCCGTGGTCGGAGTATTTCGAGTTATATTAAGACGATGGGTCGAGAAAGCACTGCTAGCAAGACATGAGCTACTAAGGTGATGTGCGTAAATTTTTATGGTAAAAGTGGTCTAATTTAACAAAAACAACACATAAGACTATGTTGCCTTGTTCATTTCTTGGCTATGGAACATATAATCCCAATACCATTAATATTTTACTTACTGACCCTACAATAGGAGGATTGTACAAAGTGAGGGA

mRNA sequence

GGAAAGAGCAATATGTGCATTGTCCAGCAGGTGTGGTTCCCCTTCCGTTTCTCCTCCGACATTGATGTCCATAAGCCCCAAATTGTGAGGACGCACTGTTCCATTCTGAATCTATGGAGGGTGATCAGAAATGGAGTTTGGGTGCTGTTGTGATGAAGCGGCCCTCAACCTCATGGTCCTCTCTTCTCCTTTTGTTGGTGTTCATCGCTTTTGTGACCCTCCAAATCGCCACCAGAACCCCTTTCCCCGTGTGGGCCGCCCAACCCCCGCCCCCTTCCCACGAGCCCTCCTGCGCCGCCTTCTTCCGGCGGGATGAGGCCGCCGCGCCCCTGGTGGTGATGTCCATTGCGGATTTCGGAGGCGTGGGCGACGGCAGGACCTCCAACACGGAGGCGTTCCGGAAGGCCATTCATTACATGCGCCGCTTCGCCCACCATGGCGGCTCCACACTGAGCCTCCCCCCCGGCACCTGGCTCACCGGCTCTTTTAATCTCACCTCTAATTTCACCCTTTTCCTTCAACCTGGCGCCATTCTTCTGGCCTCCCAGGATCCAGATGAGTGGCCCATTATAGAGCCACTACCTTCATATGGAAGAGGAAGAGAGAGATTGGGAGGGAGACACATTAGCCTTATTCATGGCAATGGTCTTTCCAATGTTGTCATTACAGGAGAGAATGGAACTATTGATGGTCAGGGCAAGATGTGGTGGGAGCTATGGTGGAACAGAACATTGAATCACACAAGAGGCCATCTTGTGGAATTCATGAACTCTCACAACATTCTCATCTCCAATCTCACCTTCAAAAATTCTCCCTTCTGGACTGTCCATCCTGTCTATTGCAGCAATGTTGTCATAAAAAACATGACGATCCTCGCTCCCCTCAATGCCCCGAACACTGACGGTATCGACCCAGATTCGAGTACCAATATATGTATCGAGGACTGTTACATTGAGAGCGGAGATGATCTAGTTGCAGTGAAAAGTGGATGGGATCATTATGGAATCAAACTTGCACGTCCGAGCTCGAACATCATAATAAGGCGAGTGTCTGGCACCACTCCAACCTGTTCTGGTGTCGGAATAGGAAGCGAGATGTCGGGTGGAATATCAAACATTACGATTGAGGATTTAAACATTTGGGATTCGGCAGCTGGCATTCGCATCAAATCCGACCAAGGAAGAGGAGGGTACATTGCAAATGTTAGTATAAGCAACATTGTAATGAACAGAGTGAAAATGGCTATCAGGTTCAGCAGGGGTTCAAATGACCATCCTGATGAGAAATGGGATCCAAAGGCAGTTCCCAAAGTGAAGGGTATTTTCATTAGCAACATCACGAGCTTAAATTCGACAAAGGCTCCTGTTCTCGATGGCATTAAGGGCACGTTGTATGATGGGGTATGCATGAAAAATGTCACCATTCTCGGCCTTGCTCCCTCCGCAAAATGGCATTGTGCTTTCGTGTTGGGTTTTAGCAGTGCAGTCTTTCCTACGCCATGTCCTCAGTTGCAGAACATCACATTCTCATCGCTGTGCGCATAATTTTAAACCACCACAGACACAGTTTTGCAAACTTTGGGTGCCACATGAGACCAAGCCGTGGTCGGAGTATTTCGAGTTATATTAAGACGATGGGTCGAGAAAGCACTGCTAGCAAGACATGAGCTACTAAGGTGATGTGCGTAAATTTTTATGGTAAAAGTGGTCTAATTTAACAAAAACAACACATAAGACTATGTTGCCTTGTTCATTTCTTGGCTATGGAACATATAATCCCAATACCATTAATATTTTACTTACTGACCCTACAATAGGAGGATTGTACAAAGTGAGGGA

Coding sequence (CDS)

ATGGAGGGTGATCAGAAATGGAGTTTGGGTGCTGTTGTGATGAAGCGGCCCTCAACCTCATGGTCCTCTCTTCTCCTTTTGTTGGTGTTCATCGCTTTTGTGACCCTCCAAATCGCCACCAGAACCCCTTTCCCCGTGTGGGCCGCCCAACCCCCGCCCCCTTCCCACGAGCCCTCCTGCGCCGCCTTCTTCCGGCGGGATGAGGCCGCCGCGCCCCTGGTGGTGATGTCCATTGCGGATTTCGGAGGCGTGGGCGACGGCAGGACCTCCAACACGGAGGCGTTCCGGAAGGCCATTCATTACATGCGCCGCTTCGCCCACCATGGCGGCTCCACACTGAGCCTCCCCCCCGGCACCTGGCTCACCGGCTCTTTTAATCTCACCTCTAATTTCACCCTTTTCCTTCAACCTGGCGCCATTCTTCTGGCCTCCCAGGATCCAGATGAGTGGCCCATTATAGAGCCACTACCTTCATATGGAAGAGGAAGAGAGAGATTGGGAGGGAGACACATTAGCCTTATTCATGGCAATGGTCTTTCCAATGTTGTCATTACAGGAGAGAATGGAACTATTGATGGTCAGGGCAAGATGTGGTGGGAGCTATGGTGGAACAGAACATTGAATCACACAAGAGGCCATCTTGTGGAATTCATGAACTCTCACAACATTCTCATCTCCAATCTCACCTTCAAAAATTCTCCCTTCTGGACTGTCCATCCTGTCTATTGCAGCAATGTTGTCATAAAAAACATGACGATCCTCGCTCCCCTCAATGCCCCGAACACTGACGGTATCGACCCAGATTCGAGTACCAATATATGTATCGAGGACTGTTACATTGAGAGCGGAGATGATCTAGTTGCAGTGAAAAGTGGATGGGATCATTATGGAATCAAACTTGCACGTCCGAGCTCGAACATCATAATAAGGCGAGTGTCTGGCACCACTCCAACCTGTTCTGGTGTCGGAATAGGAAGCGAGATGTCGGGTGGAATATCAAACATTACGATTGAGGATTTAAACATTTGGGATTCGGCAGCTGGCATTCGCATCAAATCCGACCAAGGAAGAGGAGGGTACATTGCAAATGTTAGTATAAGCAACATTGTAATGAACAGAGTGAAAATGGCTATCAGGTTCAGCAGGGGTTCAAATGACCATCCTGATGAGAAATGGGATCCAAAGGCAGTTCCCAAAGTGAAGGGTATTTTCATTAGCAACATCACGAGCTTAAATTCGACAAAGGCTCCTGTTCTCGATGGCATTAAGGGCACGTTGTATGATGGGGTATGCATGAAAAATGTCACCATTCTCGGCCTTGCTCCCTCCGCAAAATGGCATTGTGCTTTCGTGTTGGGTTTTAGCAGTGCAGTCTTTCCTACGCCATGTCCTCAGTTGCAGAACATCACATTCTCATCGCTGTGCGCATAA

Protein sequence

MEGDQKWSLGAVVMKRPSTSWSSLLLLLVFIAFVTLQIATRTPFPVWAAQPPPPSHEPSCAAFFRRDEAAAPLVVMSIADFGGVGDGRTSNTEAFRKAIHYMRRFAHHGGSTLSLPPGTWLTGSFNLTSNFTLFLQPGAILLASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNGLSNVVITGENGTIDGQGKMWWELWWNRTLNHTRGHLVEFMNSHNILISNLTFKNSPFWTVHPVYCSNVVIKNMTILAPLNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDHYGIKLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNIWDSAAGIRIKSDQGRGGYIANVSISNIVMNRVKMAIRFSRGSNDHPDEKWDPKAVPKVKGIFISNITSLNSTKAPVLDGIKGTLYDGVCMKNVTILGLAPSAKWHCAFVLGFSSAVFPTPCPQLQNITFSSLCA

Homology

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BLAST of Sed0015910 vs. NCBI nr
Match: XP_022946971.1 (probable polygalacturonase [Cucurbita moschata])

HSP 1 Score: 820.5 bits (2118), Expect = 7.7e-234
Identity = 402/479 (83.92%), Postives = 432/479 (90.19%), Query Frame = 0


Query: 1   MEGDQKWSLGAVVMKRPSTSWSSLLLLLVFIAFVTLQIATRTPFPVW---AAQPPPPSHE 60
           M+G +K S G+++    + S SSLLLL +FIA +TLQIATRTPFP+W   +        E
Sbjct: 1   MDG-EKSSFGSLI----NPSCSSLLLLFIFIAILTLQIATRTPFPIWMPSSTLTTDTDSE 60

Query: 61  PSCAAFFRRDEAAAPLVVMSIADFGGVGDGRTSNTEAFRKAIHYMRRFAHHGGSTLSLPP 120
           P+C+AFF RD AA   VVMSI DFGGVGDGRTSNTEAFRKAI YMRRF   GGS L +P 
Sbjct: 61  PTCSAFFHRD-AAPETVVMSITDFGGVGDGRTSNTEAFRKAIEYMRRFGDKGGSKLVVPK 120

Query: 121 GTWLTGSFNLTSNFTLFLQPGAILLASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGN 180
           G W+TGSFNLT+NFTLFLQ GA++L SQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGN
Sbjct: 121 GRWVTGSFNLTTNFTLFLQRGAVILGSQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGN 180

Query: 181 GLSNVVITGENGTIDGQGKMWWELWWNRTLNHTRGHLVEFMNSHNILISNLTFKNSPFWT 240
            LSNV+ITGENGTIDGQGKMWW+LWWNRTLNHTRGHL+E +NSHNILISNLT KNSPFWT
Sbjct: 181 ALSNVLITGENGTIDGQGKMWWDLWWNRTLNHTRGHLIELINSHNILISNLTLKNSPFWT 240

Query: 241 VHPVYCSNVVIKNMTILAPLNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDHYG 300
           VHPVYCSNVVIKNMTILAPLNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWD YG
Sbjct: 241 VHPVYCSNVVIKNMTILAPLNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDQYG 300

Query: 301 IKLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNIWDSAAGIRIKSDQGR 360
           I LARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNIWDSAAG+RIKSDQGR
Sbjct: 301 INLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNIWDSAAGVRIKSDQGR 360

Query: 361 GGYIANVSISNIVMNRVKMAIRFSRGSNDHPDEKWDPKAVPKVKGIFISNITSLNSTKAP 420
           GGYIAN+SISN VMNRVKMAIRFS+GSNDHPDE+WDPKAVP VKGIFISNITSLNSTKAP
Sbjct: 361 GGYIANISISNFVMNRVKMAIRFSKGSNDHPDEEWDPKAVPMVKGIFISNITSLNSTKAP 420

Query: 421 VLDGIKGTLYDGVCMKNVTILGLAPSAKWHCAFVLGFSSAVFPTPCPQLQNITFSSLCA 477
           VL+GI+GTL+DGVCMKNVTILGLAPSAKWHCAFV GFSSAVFPTPCPQLQNIT SS+C+
Sbjct: 421 VLNGIEGTLFDGVCMKNVTILGLAPSAKWHCAFVSGFSSAVFPTPCPQLQNITVSSMCS 473

[Close]

BLAST of Sed0015910 vs. NCBI nr
Match: XP_023533571.1 (probable polygalacturonase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 816.2 bits (2107), Expect = 1.5e-232
Identity = 396/460 (86.09%), Postives = 420/460 (91.30%), Query Frame = 0


Query: 20  SWSSLLLLLVFIAFVTLQIATRTPFPVW---AAQPPPPSHEPSCAAFFRRDEAAAPLVVM 79
           S SSLLLL +FIA +TLQIATRTPFP+W   +        EP+C+AFF RD  A   VVM
Sbjct: 15  SCSSLLLLFIFIAVLTLQIATRTPFPIWMPSSTLTTDTDSEPTCSAFFHRD-VAPETVVM 74

Query: 80  SIADFGGVGDGRTSNTEAFRKAIHYMRRFAHHGGSTLSLPPGTWLTGSFNLTSNFTLFLQ 139
           SI DFGGVGDGRTSNTEAFRKAI YMRRF   GGS L +P G W+TGSFNLT+NFTLFLQ
Sbjct: 75  SITDFGGVGDGRTSNTEAFRKAIEYMRRFGEKGGSKLVVPKGRWVTGSFNLTTNFTLFLQ 134

Query: 140 PGAILLASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNGLSNVVITGENGTIDGQGK 199
            GA++L SQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGN LSNV+ITGENGTIDGQGK
Sbjct: 135 RGAVILGSQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNALSNVLITGENGTIDGQGK 194

Query: 200 MWWELWWNRTLNHTRGHLVEFMNSHNILISNLTFKNSPFWTVHPVYCSNVVIKNMTILAP 259
           MWW+LWWNRTLNHTRGHL+E +NSHNILISNLT KNSPFWTVHPVYCSNVVIKNMTILAP
Sbjct: 195 MWWDLWWNRTLNHTRGHLIELINSHNILISNLTLKNSPFWTVHPVYCSNVVIKNMTILAP 254

Query: 260 LNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDHYGIKLARPSSNIIIRRVSGTT 319
           LNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWD YGI LARPSSNIIIRRVSGTT
Sbjct: 255 LNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIIIRRVSGTT 314

Query: 320 PTCSGVGIGSEMSGGISNITIEDLNIWDSAAGIRIKSDQGRGGYIANVSISNIVMNRVKM 379
           PTCSGVGIGSEMSGGISNITIEDLNIWDSAAG+RIKSDQGRGGYIAN+SISN VMNRVKM
Sbjct: 315 PTCSGVGIGSEMSGGISNITIEDLNIWDSAAGVRIKSDQGRGGYIANISISNFVMNRVKM 374

Query: 380 AIRFSRGSNDHPDEKWDPKAVPKVKGIFISNITSLNSTKAPVLDGIKGTLYDGVCMKNVT 439
           AIRFS+GSNDHPDE+WDPKAVP VKGIFISNITSLNSTKAPVL+GI+GTL+DGVCMKNVT
Sbjct: 375 AIRFSKGSNDHPDEEWDPKAVPIVKGIFISNITSLNSTKAPVLNGIEGTLFDGVCMKNVT 434

Query: 440 ILGLAPSAKWHCAFVLGFSSAVFPTPCPQLQNITFSSLCA 477
           ILGLAPSAKWHCAFV GFSSAVFPTPCPQLQNIT SS+C+
Sbjct: 435 ILGLAPSAKWHCAFVSGFSSAVFPTPCPQLQNITVSSMCS 473

[Close]

BLAST of Sed0015910 vs. NCBI nr
Match: XP_023007164.1 (probable polygalacturonase [Cucurbita maxima])

HSP 1 Score: 814.7 bits (2103), Expect = 4.2e-232
Identity = 395/461 (85.68%), Postives = 420/461 (91.11%), Query Frame = 0


Query: 20  SWSSLLLLLVFIAFVTLQIATRTPFPVW----AAQPPPPSHEPSCAAFFRRDEAAAPLVV 79
           S SSLLLL +FIA +TLQIATRTPFP+W             EP+C+AFF RD AA   VV
Sbjct: 15  SCSSLLLLFIFIAILTLQIATRTPFPIWMPSSTLATTDTDSEPTCSAFFHRD-AAPDTVV 74

Query: 80  MSIADFGGVGDGRTSNTEAFRKAIHYMRRFAHHGGSTLSLPPGTWLTGSFNLTSNFTLFL 139
           M I DFGGVGDGRTSNTEAFRKAI YMRRF   GGS L +P G+W+TGSFNLT+NFTLFL
Sbjct: 75  MLITDFGGVGDGRTSNTEAFRKAIEYMRRFGETGGSKLIVPKGSWITGSFNLTTNFTLFL 134

Query: 140 QPGAILLASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNGLSNVVITGENGTIDGQG 199
           Q GA++L SQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGN LSNV+ITGENGTIDGQG
Sbjct: 135 QRGAVILGSQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNALSNVLITGENGTIDGQG 194

Query: 200 KMWWELWWNRTLNHTRGHLVEFMNSHNILISNLTFKNSPFWTVHPVYCSNVVIKNMTILA 259
           KMWW+LWWNRTLNHTRGHL+E +NSHNILISNLT KNSPFWTVHPVYCSNVVIKNMTILA
Sbjct: 195 KMWWDLWWNRTLNHTRGHLIELINSHNILISNLTLKNSPFWTVHPVYCSNVVIKNMTILA 254

Query: 260 PLNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDHYGIKLARPSSNIIIRRVSGT 319
           PLNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWD YGI LARPSSNIIIRRVSGT
Sbjct: 255 PLNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIIIRRVSGT 314

Query: 320 TPTCSGVGIGSEMSGGISNITIEDLNIWDSAAGIRIKSDQGRGGYIANVSISNIVMNRVK 379
           TPTCSGVGIGSEMSGGISNITI+DLNIWDSAAG+RIKSDQGRGGYIAN+SISN VMNRVK
Sbjct: 315 TPTCSGVGIGSEMSGGISNITIDDLNIWDSAAGVRIKSDQGRGGYIANISISNFVMNRVK 374

Query: 380 MAIRFSRGSNDHPDEKWDPKAVPKVKGIFISNITSLNSTKAPVLDGIKGTLYDGVCMKNV 439
           MAIRFS+GSNDHPDE+WDPKAVP VKGIFISNITSLNSTKAPVL+GI+GTL+DGVCMKNV
Sbjct: 375 MAIRFSKGSNDHPDEEWDPKAVPIVKGIFISNITSLNSTKAPVLNGIEGTLFDGVCMKNV 434

Query: 440 TILGLAPSAKWHCAFVLGFSSAVFPTPCPQLQNITFSSLCA 477
           TILGLAPSAKWHCAFV GFSSAVFPTPCPQLQNIT SS+C+
Sbjct: 435 TILGLAPSAKWHCAFVSGFSSAVFPTPCPQLQNITVSSMCS 474

[Close]

BLAST of Sed0015910 vs. NCBI nr
Match: XP_038900759.1 (probable polygalacturonase [Benincasa hispida])

HSP 1 Score: 807.7 bits (2085), Expect = 5.2e-230
Identity = 395/479 (82.46%), Postives = 431/479 (89.98%), Query Frame = 0


Query: 1   MEGDQ-KWSLGAVVMKRPSTSWSSLLLLLVFIAFVTLQIATRTPFP-VWAAQPPPPSHEP 60
           M+G++ K+S G  +    + S SSLLLL +F+A +T QIATRTPFP +W    P    +P
Sbjct: 1   MDGEKSKFSFGPPI----NPSCSSLLLLFIFLAILTFQIATRTPFPTIWL---PSDFQQP 60

Query: 61  SCAAFFRRDEAA-APLVVMSIADFGGVGDGRTSNTEAFRKAIHYMRRFAHHGGSTLSLPP 120
           +C+AFFRRD AA    VVMSI DFGGVGDG+TSNTEAFRKAI YMRRF   GGS L++P 
Sbjct: 61  TCSAFFRRDAAADTAAVVMSITDFGGVGDGKTSNTEAFRKAIEYMRRFGEKGGSKLTVPK 120

Query: 121 GTWLTGSFNLTSNFTLFLQPGAILLASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGN 180
           G+W+TGSFNLTSNFTLFLQ GA++LASQDP+EWPIIEPLPSYGRGRERLGGRHISLIHGN
Sbjct: 121 GSWVTGSFNLTSNFTLFLQRGALILASQDPEEWPIIEPLPSYGRGRERLGGRHISLIHGN 180

Query: 181 GLSNVVITGENGTIDGQGKMWWELWWNRTLNHTRGHLVEFMNSHNILISNLTFKNSPFWT 240
            LSNVVITGENGTIDGQGKMWWELWWNRTLNHTRGHLVE ++SHNILISNLT KNSPFWT
Sbjct: 181 ALSNVVITGENGTIDGQGKMWWELWWNRTLNHTRGHLVELIDSHNILISNLTLKNSPFWT 240

Query: 241 VHPVYCSNVVIKNMTILAPLNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDHYG 300
           +HPVYCSNVVIK+MTILAPLNAPNTDGIDPDSS N+CIEDCYIESGDDLVAVKSGWD YG
Sbjct: 241 IHPVYCSNVVIKDMTILAPLNAPNTDGIDPDSSINVCIEDCYIESGDDLVAVKSGWDQYG 300

Query: 301 IKLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNIWDSAAGIRIKSDQGR 360
           + LARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNIWDSAAGIRIKSDQGR
Sbjct: 301 MNLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNIWDSAAGIRIKSDQGR 360

Query: 361 GGYIANVSISNIVMNRVKMAIRFSRGSNDHPDEKWDPKAVPKVKGIFISNITSLNSTKAP 420
           GGYIANVSI+N VMNRVKMAIRFS+GSNDHPDE+WDPKAVPKVKGIFI+N+ SLNSTKAP
Sbjct: 361 GGYIANVSITNFVMNRVKMAIRFSKGSNDHPDEQWDPKAVPKVKGIFITNLISLNSTKAP 420

Query: 421 VLDGIKGTLYDGVCMKNVTILGLAPSAKWHCAFVLGFSSAVFPTPCPQLQNITFSSLCA 477
           VLDGIKGT YDGVCMKNVTILGLAPSAKWHCAF+ GFS++VFP PC QLQN TFSSLC+
Sbjct: 421 VLDGIKGTSYDGVCMKNVTILGLAPSAKWHCAFISGFSTSVFPMPCLQLQNTTFSSLCS 472

[Close]

BLAST of Sed0015910 vs. NCBI nr
Match: KAA0040757.1 (putative polygalacturonase [Cucumis melo var. makuwa])

HSP 1 Score: 807.4 bits (2084), Expect = 6.7e-230
Identity = 393/458 (85.81%), Postives = 419/458 (91.48%), Query Frame = 0


Query: 20  SWSSLLLLLVFIAFVTLQIATRT-PFPVWAAQPPPPSHEPSCAAFFRRDEAAAPLVVMSI 79
           S SSLLLL +F+A +T QIATRT PFP W   PP     P+C+AFFR D  AA  VVMSI
Sbjct: 17  SCSSLLLLFIFLAILTFQIATRTPPFPFWL--PPSDFQLPTCSAFFRPDVTAA--VVMSI 76

Query: 80  ADFGGVGDGRTSNTEAFRKAIHYMRRFAHHGGSTLSLPPGTWLTGSFNLTSNFTLFLQPG 139
            DFGGVGDG+TSNTEAFRKAI YMRRF   GGS L++P G+W+TGSFNLTSNFTLFLQ G
Sbjct: 77  TDFGGVGDGKTSNTEAFRKAIQYMRRFGDKGGSKLTVPKGSWVTGSFNLTSNFTLFLQRG 136

Query: 140 AILLASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNGLSNVVITGENGTIDGQGKMW 199
           A++LASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGN LSNVVITGENGTIDGQGKMW
Sbjct: 137 ALILASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNALSNVVITGENGTIDGQGKMW 196

Query: 200 WELWWNRTLNHTRGHLVEFMNSHNILISNLTFKNSPFWTVHPVYCSNVVIKNMTILAPLN 259
           WELWWNRTLNHTRGHLVE +NSHNILISNLTFKNSPFWT+HPVYCSNVVIK+MTILAPLN
Sbjct: 197 WELWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTIHPVYCSNVVIKDMTILAPLN 256

Query: 260 APNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDHYGIKLARPSSNIIIRRVSGTTPT 319
           APNTDGIDPDSSTN+CIEDCYIESGDDLVAVKSGWD YGI LARPSSNI+IRRVSGTTPT
Sbjct: 257 APNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIVIRRVSGTTPT 316

Query: 320 CSGVGIGSEMSGGISNITIEDLNIWDSAAGIRIKSDQGRGGYIANVSISNIVMNRVKMAI 379
           CSGVGIGSEMSGGISNITIEDLN+WDSAAGIRIKSDQGRGGYIANVSI+N VMNRVKMAI
Sbjct: 317 CSGVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYIANVSITNFVMNRVKMAI 376

Query: 380 RFSRGSNDHPDEKWDPKAVPKVKGIFISNITSLNSTKAPVLDGIKGTLYDGVCMKNVTIL 439
           RFSRGSNDHPDE++DPKAVPKVKGIFI+N+ SLNSTKAPVLDGI GT YDGVCMKNVTIL
Sbjct: 377 RFSRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLDGIAGTSYDGVCMKNVTIL 436

Query: 440 GLAPSAKWHCAFVLGFSSAVFPTPCPQLQNITFSSLCA 477
           GLAPSAKWHCAFV GFS++VFP PCPQLQN TFS LC+
Sbjct: 437 GLAPSAKWHCAFVSGFSTSVFPMPCPQLQNTTFSPLCS 470

[Close]

BLAST of Sed0015910 vs. ExPASy Swiss-Prot
Match: A7PZL3 (Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 4.1e-113
Identity = 204/404 (50.50%), Postives = 274/404 (67.82%), Query Frame = 0


Query: 77  SIADFGGVGDGRTSNTEAFRKAIHYMRRFAHHGGSTLSLPPGTWLTGSFNLTSNFTLFLQ 136
           S+ DFGGVGDG+T NT+AF+ A+  + ++   GG+ L +P G WLTGSF+LTS+FTLFL 
Sbjct: 64  SLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHFTLFLH 123

Query: 137 PGAILLASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNGLSNVVITGENGTIDGQGK 196
             A+LLASQD  +WP+I+PLPSYGRGR+   GR+ SLI G  L++V+ITG+NGTIDGQG 
Sbjct: 124 RDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTIDGQGG 183

Query: 197 MWWELWWNRTLNHTRGHLVEFMNSHNILISNLTFKNSPFWTVHPVYCSNVVIKNMTILAP 256
           +WW+ +    L +TR +L+E M S +I ISNLT  NSP W VHPVY  N++I+ +TILAP
Sbjct: 184 LWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGITILAP 243

Query: 257 LNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDHYGIKLARPSSNIIIRRVSGTT 316
           + +PNTDGI+PDS TN  IEDCYI SGDD VAVKSGWD YGI    P+  ++IRR++  +
Sbjct: 244 VRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 303

Query: 317 PTCSGVGIGSEMSGGISNITIEDLNIWDSAAGIRIKSDQGRGGYIANVSISNIVMNRVKM 376
           P  + + +GSEMSGGI ++  ED+   +S +GIRIK+  GRGGY+ ++ +  + M  +K 
Sbjct: 304 PYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMKW 363

Query: 377 AIRFSRGSNDHPDEKWDPKAVPKVKGIFISNITSLNSTKAPVLDGIKGTLYDGVCMKNVT 436
           A   +     H D  +DPKA P ++GI   ++ + N + A  L+GI    + G+C+ NVT
Sbjct: 364 AFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGICISNVT 423

Query: 437 ILGLAPSAK---WHCAFVLGFSSAVFPTPCPQL--QNITFSSLC 476
           I  LA  AK   W C  V G SS V PTPC  L  Q    +SLC
Sbjct: 424 I-HLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQGPEKTSLC 466

[Close]

BLAST of Sed0015910 vs. ExPASy Swiss-Prot
Match: Q8RY29 (Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 6.9e-28
Identity = 109/388 (28.09%), Postives = 180/388 (46.39%), Query Frame = 0


Query: 64  FRRDEAAAPLVVMSIADFGGVGDGRTSNTEAFRKAIHYMRRFAHHGGSTLSLPPG-TWLT 123
           F R     P  V S++DFG  GDG+T +T+AF  A  + +  + +G   L +P G T+L 
Sbjct: 57  FVRASLRTPTTV-SVSDFGAKGDGKTDDTQAFVNA--WKKACSSNGAVNLLVPKGNTYLL 116

Query: 124 GSFNLTS--NFTLFLQPGAILLASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNGLS 183
            S  LT   N  L +Q    L ASQ   ++  I                    I  +G++
Sbjct: 117 KSIQLTGPCNSILTVQIFGTLSASQKRSDYKDIS-----------------KWIMFDGVN 176

Query: 184 NVVIT-GENGTIDGQGKMWWE--LWWNRTLNHTRG-HLVEFMNSHNILISNLTFKNSPFW 243
           N+ +  G+ G +DG G+ WW+     N+    T+    + F NS ++++ NL  +N+   
Sbjct: 177 NLSVDGGDTGVVDGNGETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQI 236

Query: 244 TVHPVYCSNVVIKNMTILAPLNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDHY 303
            +    CSNV + N+ + AP ++PNTDGI   ++ NI + +  I +GDD ++++SG    
Sbjct: 237 QISIEKCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESG---- 296

Query: 304 GIKLARPSSNIIIRRVSGTTPTCSGVGIGS----EMSGGISNITIEDLNIWDSAAGIRIK 363
                  S N+ I  +  T     G+ IGS         +S +T++   +  +  G+RIK
Sbjct: 297 -------SQNVQINDI--TCGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIK 356

Query: 364 SDQGRGGYIANVSISNIVMNRVKMAIRFSRGSNDHPDEKWDPKAVPKVKGIFISNITSLN 423
           + QG  G  +N+   NI M+ VK  I   +   D      +  AV +VK +   +I+  +
Sbjct: 357 TYQGGSGTASNIIFQNIQMDNVKNPIIIDQDYCDKSKCTTEKSAV-QVKNVVYRDISGTS 410

Query: 424 -STKAPVLDGIKGTLYDGVCMKNVTILG 440
            S  A   +  K     G+ +  V I G
Sbjct: 417 ASENAITFNCSKNYPCQGIVLDRVNIKG 410

[Close]

BLAST of Sed0015910 vs. ExPASy Swiss-Prot
Match: Q9LW07 (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 5.0e-26
Identity = 114/421 (27.08%), Postives = 182/421 (43.23%), Query Frame = 0


Query: 76  MSIADFGGVGDGRTSNTEAFRKAIHYM------RRFAHHGGSTLSLPPGTWLTGSFNLTS 135
           + +  FG VGDG T +++AF KA   +       +F    G T  L P     GS   T 
Sbjct: 24  LDVTQFGAVGDGVTDDSQAFLKAWEAVCSGTGDGQFVVPAGMTFMLQP-LKFQGSCKSTP 83

Query: 136 NFTLFLQPGAILLASQ-----DPDEWPIIEPLPSYGRGRERLGGRHISLIHGNGLSNVVI 195
            F   L  G ++  S+     D D+W +                          +  +VI
Sbjct: 84  VFVQML--GKLVAPSKGNWKGDKDQWILF-----------------------TDIEGLVI 143

Query: 196 TGENGTIDGQGKMWWELWWNRTLNHTRGHLVEFMNSHNILISNLTFKNSPFWTVHPVYCS 255
            G+ G I+GQG  WWE         +R   ++F + +N+ +S LT  +SP   +H   C+
Sbjct: 144 EGD-GEINGQGSSWWE------HKGSRPTALKFRSCNNLRLSGLTHLDSPMAHIHISECN 203

Query: 256 NVVIKNMTILAPLNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDHYGIKLARPS 315
            V I ++ I AP ++PNTDGID  +S+N+ I+DC I +GDD +A+ SG           +
Sbjct: 204 YVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSG-----------T 263

Query: 316 SNIIIRRVSGTTPTCSGVGIGSEMSGG----ISNITIEDLNIWDSAAGIRIKSDQGRGGY 375
           SNI I  +        G+ IGS    G    + N+ +++ N   +  G RIK+ QG  GY
Sbjct: 264 SNIHISGID--CGPGHGISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGY 323

Query: 376 IANVSISNIVMNRVKMAI---RFSRGSNDHPDEKWDPKAVPKVKGIFISNITSLNSTKAP 435
              ++ + I ++ V+  I   +F  G +    +     AV   K +F + I +  S    
Sbjct: 324 ARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKSEYGV 383

Query: 436 VLDGIKGTLYDGVCMKNVTI----LGLAPSAKWHCAFVLGFSSAVFP-TPCPQLQNITFS 474
                +      + ++++ I     G    A+  C  V G S+   P   C +L    FS
Sbjct: 384 DFRCSERVPCTEIFLRDMKIETASSGSGQVAQGQCLNVRGASTIAVPGLECLELSTDMFS 398

[Close]

BLAST of Sed0015910 vs. ExPASy Swiss-Prot
Match: O23147 (Polygalacturonase ADPG1 OS=Arabidopsis thaliana OX=3702 GN=ADPG1 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 4.7e-24
Identity = 104/396 (26.26%), Postives = 173/396 (43.69%), Query Frame = 0


Query: 67  DEAAAPLVVMSIADFGGVGDGRTSNTEAFRKAIHYMRRFAHHGGSTLSLPPG-------T 126
           DE       +S+++FG  GDG+T +T+AF+KA  + +  + +G +T  +P G       T
Sbjct: 59  DETTLEASTVSVSNFGAKGDGKTDDTQAFKKA--WKKACSTNGVTTFLVPKGKTYLLKST 118

Query: 127 WLTGSFNLTSNFTLFLQPGAILLAS--QDPDEWPIIEPLPSYGRGRERLGGRHISLIHGN 186
              G      NF +     A    S  +D + W I+E +                    N
Sbjct: 119 RFRGPCKSLRNFQILGTLSASTKRSDYKDKNHWLILEDV--------------------N 178

Query: 187 GLSNVVITGENGTIDGQGKMWWE--LWWNRTLNHTRG-HLVEFMNSHNILISNLTFKNSP 246
            LS  +  G  G I+G GK WW+     +++   T+    +   N  N+ + NL  KN+ 
Sbjct: 179 NLS--IDGGSTGIINGNGKTWWQNSCKIDKSKPCTKAPTALTLYNLKNLNVKNLRVKNAQ 238

Query: 247 FWTVHPVYCSNVVIKNMTILAPLNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWD 306
              +    C+ V + N+ I AP ++PNTDGI   ++ NI + +  I +GDD ++++ G  
Sbjct: 239 QIQISIEKCNKVEVSNVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQ 298

Query: 307 HYGIKLARPSSNIIIRRVSGTTPTCSGVGIGS----EMSGGISNITIEDLNIWDSAAGIR 366
           +  I                T     G+ IGS         +S I ++     +S  G+R
Sbjct: 299 NLQI-------------FDLTCGPGHGISIGSLGDDNSKAYVSGINVDGAKFSESDNGVR 358

Query: 367 IKSDQGRGGYIANVSISNIVMNRVKMAIRFSRGSNDHPDEKWDPKAVPKVKGIFISNITS 426
           IK+ QG  G   N+   NI M  VK  I   +   D  D+  D ++  +VK +   NI+ 
Sbjct: 359 IKTYQGGSGTAKNIKFQNIRMENVKNPIIIDQDYCD-KDKCEDQESAVQVKNVVYKNISG 416

Query: 427 LNSTKAPV-LDGIKGTLYDGVCMKNVTILGLAPSAK 446
            ++T   + L+  +     G+ ++NV I G   S K
Sbjct: 419 TSATDVAITLNCSEKYPCQGIVLENVKIKGGTASCK 416

[Close]

BLAST of Sed0015910 vs. ExPASy Swiss-Prot
Match: Q02096 (Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 6.1e-24
Identity = 101/383 (26.37%), Postives = 174/383 (45.43%), Query Frame = 0


Query: 71  APLVVMSIADFGGVGDGRTSNTEAFRKAIHYMRRFAHHGGSTLSLPPG-TWLTG--SFNL 130
           +P   +S+ DFG  GDG T +T+AF KA     + A   GS L +P    +L    +F+ 
Sbjct: 80  SPDTDISVDDFGARGDG-TDDTKAFEKA----WKDACSSGSVLIVPENKNYLLKQITFSG 139

Query: 131 TSNFTLFLQPGAILLASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNGLSNVVITGE 190
                L ++    + AS D  +W         G  R+R        I    +SN+ + G 
Sbjct: 140 PCKSDLRVKIRGTIEASSDQSDW--------VGHNRKR-------WIEFEDISNLTLEG- 199

Query: 191 NGTIDGQGKMWWELWWNRTLN---HTRGHLVEFMNSHNILISNLTFKNSPFWTVHPVYCS 250
            GT +G G+ WW+    R  +    +    + F +  N+++S+L+ K+S    +    C 
Sbjct: 200 GGTSNGNGETWWDSSCKRKKSLPCKSAPTALTFRSCKNLIVSDLSIKDSQKMHLSFDKCQ 259

Query: 251 NVVIKNMTILAPLNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDHYGIKLARPS 310
           +V+  N+ + AP ++PNTDGI    +  I + +  I +GDD ++++SG            
Sbjct: 260 DVIASNLMVTAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCISIESG------------ 319

Query: 311 SNIIIRRVSGTTPTCS---GVGIGS----EMSGGISNITIEDLNIWDSAAGIRIKSDQGR 370
                + V  T  TC    G+ IGS         +S + ++  N++D+  G+RIK+ QG 
Sbjct: 320 ----SKMVIATNITCGPGHGISIGSLGDRNSEAHVSGVLVDGGNLFDTTNGLRIKTWQGG 379

Query: 371 GGYIANVSISNIVMNRVKMAIRFSRGSNDHPDEKWDPKAVPKVKGIFISNITSLNSTKAP 430
            G   N+   NIVM+ V   I   +   D  D   + ++  KV  +   NI   ++++  
Sbjct: 380 SGSAKNIKFQNIVMHNVTNPIIIDQYYCDSKDPCPEQESAVKVSNVAYMNIRGTSASEVA 425

Query: 431 V-LDGIKGTLYDGVCMKNVTILG 440
           V  D  K +   G  + N+ ++G
Sbjct: 440 VKFDCSKSSPCQGYIVGNINLVG 425

[Close]

BLAST of Sed0015910 vs. ExPASy TrEMBL
Match: A0A6J1G526 (probable polygalacturonase OS=Cucurbita moschata OX=3662 GN=LOC111450990 PE=3 SV=1)

HSP 1 Score: 820.5 bits (2118), Expect = 3.7e-234
Identity = 402/479 (83.92%), Postives = 432/479 (90.19%), Query Frame = 0


Query: 1   MEGDQKWSLGAVVMKRPSTSWSSLLLLLVFIAFVTLQIATRTPFPVW---AAQPPPPSHE 60
           M+G +K S G+++    + S SSLLLL +FIA +TLQIATRTPFP+W   +        E
Sbjct: 1   MDG-EKSSFGSLI----NPSCSSLLLLFIFIAILTLQIATRTPFPIWMPSSTLTTDTDSE 60

Query: 61  PSCAAFFRRDEAAAPLVVMSIADFGGVGDGRTSNTEAFRKAIHYMRRFAHHGGSTLSLPP 120
           P+C+AFF RD AA   VVMSI DFGGVGDGRTSNTEAFRKAI YMRRF   GGS L +P 
Sbjct: 61  PTCSAFFHRD-AAPETVVMSITDFGGVGDGRTSNTEAFRKAIEYMRRFGDKGGSKLVVPK 120

Query: 121 GTWLTGSFNLTSNFTLFLQPGAILLASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGN 180
           G W+TGSFNLT+NFTLFLQ GA++L SQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGN
Sbjct: 121 GRWVTGSFNLTTNFTLFLQRGAVILGSQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGN 180

Query: 181 GLSNVVITGENGTIDGQGKMWWELWWNRTLNHTRGHLVEFMNSHNILISNLTFKNSPFWT 240
            LSNV+ITGENGTIDGQGKMWW+LWWNRTLNHTRGHL+E +NSHNILISNLT KNSPFWT
Sbjct: 181 ALSNVLITGENGTIDGQGKMWWDLWWNRTLNHTRGHLIELINSHNILISNLTLKNSPFWT 240

Query: 241 VHPVYCSNVVIKNMTILAPLNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDHYG 300
           VHPVYCSNVVIKNMTILAPLNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWD YG
Sbjct: 241 VHPVYCSNVVIKNMTILAPLNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDQYG 300

Query: 301 IKLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNIWDSAAGIRIKSDQGR 360
           I LARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNIWDSAAG+RIKSDQGR
Sbjct: 301 INLARPSSNIIIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNIWDSAAGVRIKSDQGR 360

Query: 361 GGYIANVSISNIVMNRVKMAIRFSRGSNDHPDEKWDPKAVPKVKGIFISNITSLNSTKAP 420
           GGYIAN+SISN VMNRVKMAIRFS+GSNDHPDE+WDPKAVP VKGIFISNITSLNSTKAP
Sbjct: 361 GGYIANISISNFVMNRVKMAIRFSKGSNDHPDEEWDPKAVPMVKGIFISNITSLNSTKAP 420

Query: 421 VLDGIKGTLYDGVCMKNVTILGLAPSAKWHCAFVLGFSSAVFPTPCPQLQNITFSSLCA 477
           VL+GI+GTL+DGVCMKNVTILGLAPSAKWHCAFV GFSSAVFPTPCPQLQNIT SS+C+
Sbjct: 421 VLNGIEGTLFDGVCMKNVTILGLAPSAKWHCAFVSGFSSAVFPTPCPQLQNITVSSMCS 473

[Close]

BLAST of Sed0015910 vs. ExPASy TrEMBL
Match: A0A6J1L474 (probable polygalacturonase OS=Cucurbita maxima OX=3661 GN=LOC111499740 PE=3 SV=1)

HSP 1 Score: 814.7 bits (2103), Expect = 2.0e-232
Identity = 395/461 (85.68%), Postives = 420/461 (91.11%), Query Frame = 0


Query: 20  SWSSLLLLLVFIAFVTLQIATRTPFPVW----AAQPPPPSHEPSCAAFFRRDEAAAPLVV 79
           S SSLLLL +FIA +TLQIATRTPFP+W             EP+C+AFF RD AA   VV
Sbjct: 15  SCSSLLLLFIFIAILTLQIATRTPFPIWMPSSTLATTDTDSEPTCSAFFHRD-AAPDTVV 74

Query: 80  MSIADFGGVGDGRTSNTEAFRKAIHYMRRFAHHGGSTLSLPPGTWLTGSFNLTSNFTLFL 139
           M I DFGGVGDGRTSNTEAFRKAI YMRRF   GGS L +P G+W+TGSFNLT+NFTLFL
Sbjct: 75  MLITDFGGVGDGRTSNTEAFRKAIEYMRRFGETGGSKLIVPKGSWITGSFNLTTNFTLFL 134

Query: 140 QPGAILLASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNGLSNVVITGENGTIDGQG 199
           Q GA++L SQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGN LSNV+ITGENGTIDGQG
Sbjct: 135 QRGAVILGSQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNALSNVLITGENGTIDGQG 194

Query: 200 KMWWELWWNRTLNHTRGHLVEFMNSHNILISNLTFKNSPFWTVHPVYCSNVVIKNMTILA 259
           KMWW+LWWNRTLNHTRGHL+E +NSHNILISNLT KNSPFWTVHPVYCSNVVIKNMTILA
Sbjct: 195 KMWWDLWWNRTLNHTRGHLIELINSHNILISNLTLKNSPFWTVHPVYCSNVVIKNMTILA 254

Query: 260 PLNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDHYGIKLARPSSNIIIRRVSGT 319
           PLNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWD YGI LARPSSNIIIRRVSGT
Sbjct: 255 PLNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIIIRRVSGT 314

Query: 320 TPTCSGVGIGSEMSGGISNITIEDLNIWDSAAGIRIKSDQGRGGYIANVSISNIVMNRVK 379
           TPTCSGVGIGSEMSGGISNITI+DLNIWDSAAG+RIKSDQGRGGYIAN+SISN VMNRVK
Sbjct: 315 TPTCSGVGIGSEMSGGISNITIDDLNIWDSAAGVRIKSDQGRGGYIANISISNFVMNRVK 374

Query: 380 MAIRFSRGSNDHPDEKWDPKAVPKVKGIFISNITSLNSTKAPVLDGIKGTLYDGVCMKNV 439
           MAIRFS+GSNDHPDE+WDPKAVP VKGIFISNITSLNSTKAPVL+GI+GTL+DGVCMKNV
Sbjct: 375 MAIRFSKGSNDHPDEEWDPKAVPIVKGIFISNITSLNSTKAPVLNGIEGTLFDGVCMKNV 434

Query: 440 TILGLAPSAKWHCAFVLGFSSAVFPTPCPQLQNITFSSLCA 477
           TILGLAPSAKWHCAFV GFSSAVFPTPCPQLQNIT SS+C+
Sbjct: 435 TILGLAPSAKWHCAFVSGFSSAVFPTPCPQLQNITVSSMCS 474

[Close]

BLAST of Sed0015910 vs. ExPASy TrEMBL
Match: A0A5A7TGP3 (Putative polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold703G00210 PE=3 SV=1)

HSP 1 Score: 807.4 bits (2084), Expect = 3.3e-230
Identity = 393/458 (85.81%), Postives = 419/458 (91.48%), Query Frame = 0


Query: 20  SWSSLLLLLVFIAFVTLQIATRT-PFPVWAAQPPPPSHEPSCAAFFRRDEAAAPLVVMSI 79
           S SSLLLL +F+A +T QIATRT PFP W   PP     P+C+AFFR D  AA  VVMSI
Sbjct: 17  SCSSLLLLFIFLAILTFQIATRTPPFPFWL--PPSDFQLPTCSAFFRPDVTAA--VVMSI 76

Query: 80  ADFGGVGDGRTSNTEAFRKAIHYMRRFAHHGGSTLSLPPGTWLTGSFNLTSNFTLFLQPG 139
            DFGGVGDG+TSNTEAFRKAI YMRRF   GGS L++P G+W+TGSFNLTSNFTLFLQ G
Sbjct: 77  TDFGGVGDGKTSNTEAFRKAIQYMRRFGDKGGSKLTVPKGSWVTGSFNLTSNFTLFLQRG 136

Query: 140 AILLASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNGLSNVVITGENGTIDGQGKMW 199
           A++LASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGN LSNVVITGENGTIDGQGKMW
Sbjct: 137 ALILASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNALSNVVITGENGTIDGQGKMW 196

Query: 200 WELWWNRTLNHTRGHLVEFMNSHNILISNLTFKNSPFWTVHPVYCSNVVIKNMTILAPLN 259
           WELWWNRTLNHTRGHLVE +NSHNILISNLTFKNSPFWT+HPVYCSNVVIK+MTILAPLN
Sbjct: 197 WELWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTIHPVYCSNVVIKDMTILAPLN 256

Query: 260 APNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDHYGIKLARPSSNIIIRRVSGTTPT 319
           APNTDGIDPDSSTN+CIEDCYIESGDDLVAVKSGWD YGI LARPSSNI+IRRVSGTTPT
Sbjct: 257 APNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIVIRRVSGTTPT 316

Query: 320 CSGVGIGSEMSGGISNITIEDLNIWDSAAGIRIKSDQGRGGYIANVSISNIVMNRVKMAI 379
           CSGVGIGSEMSGGISNITIEDLN+WDSAAGIRIKSDQGRGGYIANVSI+N VMNRVKMAI
Sbjct: 317 CSGVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYIANVSITNFVMNRVKMAI 376

Query: 380 RFSRGSNDHPDEKWDPKAVPKVKGIFISNITSLNSTKAPVLDGIKGTLYDGVCMKNVTIL 439
           RFSRGSNDHPDE++DPKAVPKVKGIFI+N+ SLNSTKAPVLDGI GT YDGVCMKNVTIL
Sbjct: 377 RFSRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLDGIAGTSYDGVCMKNVTIL 436

Query: 440 GLAPSAKWHCAFVLGFSSAVFPTPCPQLQNITFSSLCA 477
           GLAPSAKWHCAFV GFS++VFP PCPQLQN TFS LC+
Sbjct: 437 GLAPSAKWHCAFVSGFSTSVFPMPCPQLQNTTFSPLCS 470

[Close]

BLAST of Sed0015910 vs. ExPASy TrEMBL
Match: A0A1S3CDX7 (probable polygalacturonase OS=Cucumis melo OX=3656 GN=LOC103499630 PE=3 SV=1)

HSP 1 Score: 807.4 bits (2084), Expect = 3.3e-230
Identity = 393/458 (85.81%), Postives = 419/458 (91.48%), Query Frame = 0


Query: 20  SWSSLLLLLVFIAFVTLQIATRT-PFPVWAAQPPPPSHEPSCAAFFRRDEAAAPLVVMSI 79
           S SSLLLL +F+A +T QIATRT PFP W   PP     P+C+AFFR D  AA  VVMSI
Sbjct: 58  SCSSLLLLFIFLAILTFQIATRTPPFPFWL--PPSDFQLPTCSAFFRPDVTAA--VVMSI 117

Query: 80  ADFGGVGDGRTSNTEAFRKAIHYMRRFAHHGGSTLSLPPGTWLTGSFNLTSNFTLFLQPG 139
            DFGGVGDG+TSNTEAFRKAI YMRRF   GGS L++P G+W+TGSFNLTSNFTLFLQ G
Sbjct: 118 TDFGGVGDGKTSNTEAFRKAIQYMRRFGDKGGSKLTVPKGSWVTGSFNLTSNFTLFLQRG 177

Query: 140 AILLASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNGLSNVVITGENGTIDGQGKMW 199
           A++LASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGN LSNVVITGENGTIDGQGKMW
Sbjct: 178 ALILASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNALSNVVITGENGTIDGQGKMW 237

Query: 200 WELWWNRTLNHTRGHLVEFMNSHNILISNLTFKNSPFWTVHPVYCSNVVIKNMTILAPLN 259
           WELWWNRTLNHTRGHLVE +NSHNILISNLTFKNSPFWT+HPVYCSNVVIK+MTILAPLN
Sbjct: 238 WELWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTIHPVYCSNVVIKDMTILAPLN 297

Query: 260 APNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDHYGIKLARPSSNIIIRRVSGTTPT 319
           APNTDGIDPDSSTN+CIEDCYIESGDDLVAVKSGWD YGI LARPSSNI+IRRVSGTTPT
Sbjct: 298 APNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIVIRRVSGTTPT 357

Query: 320 CSGVGIGSEMSGGISNITIEDLNIWDSAAGIRIKSDQGRGGYIANVSISNIVMNRVKMAI 379
           CSGVGIGSEMSGGISNITIEDLN+WDSAAGIRIKSDQGRGGYIANVSI+N VMNRVKMAI
Sbjct: 358 CSGVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYIANVSITNFVMNRVKMAI 417

Query: 380 RFSRGSNDHPDEKWDPKAVPKVKGIFISNITSLNSTKAPVLDGIKGTLYDGVCMKNVTIL 439
           RFSRGSNDHPDE++DPKAVPKVKGIFI+N+ SLNSTKAPVLDGI GT YDGVCMKNVTIL
Sbjct: 418 RFSRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLDGIAGTSYDGVCMKNVTIL 477

Query: 440 GLAPSAKWHCAFVLGFSSAVFPTPCPQLQNITFSSLCA 477
           GLAPSAKWHCAFV GFS++VFP PCPQLQN TFS LC+
Sbjct: 478 GLAPSAKWHCAFVSGFSTSVFPMPCPQLQNTTFSPLCS 511

[Close]

BLAST of Sed0015910 vs. ExPASy TrEMBL
Match: A0A0A0LJW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G334510 PE=3 SV=1)

HSP 1 Score: 805.4 bits (2079), Expect = 1.2e-229
Identity = 392/458 (85.59%), Postives = 418/458 (91.27%), Query Frame = 0


Query: 20  SWSSLLLLLVFIAFVTLQIATRT-PFPVWAAQPPPPSHEPSCAAFFRRDEAAAPLVVMSI 79
           S SSLLLL +F+A +T QIATRT PFP W   PP     P+C+AFFR D  A   VVMSI
Sbjct: 17  SCSSLLLLFIFLAILTFQIATRTPPFPFWL--PPSDFQLPTCSAFFRPDATAG--VVMSI 76

Query: 80  ADFGGVGDGRTSNTEAFRKAIHYMRRFAHHGGSTLSLPPGTWLTGSFNLTSNFTLFLQPG 139
            DFGGVGDG+TSNTEAFRKAI YMRRF   GGS L++P G+W+TGSFNLTSNFTLFLQ G
Sbjct: 77  TDFGGVGDGKTSNTEAFRKAIQYMRRFGDKGGSKLTVPKGSWVTGSFNLTSNFTLFLQRG 136

Query: 140 AILLASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNGLSNVVITGENGTIDGQGKMW 199
           A++LASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGN LSNVVITGENGTIDGQGKMW
Sbjct: 137 ALILASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNALSNVVITGENGTIDGQGKMW 196

Query: 200 WELWWNRTLNHTRGHLVEFMNSHNILISNLTFKNSPFWTVHPVYCSNVVIKNMTILAPLN 259
           WELWWNRTLNHTRGHLVE +NSHNILISNLTFKNSPFWT+HPVYCSNVVIK+MTILAPLN
Sbjct: 197 WELWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTIHPVYCSNVVIKDMTILAPLN 256

Query: 260 APNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDHYGIKLARPSSNIIIRRVSGTTPT 319
           APNTDGIDPDSSTN+CIEDCYIESGDDLVAVKSGWD YGI LARPSSNI+IRRVSGTTPT
Sbjct: 257 APNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIVIRRVSGTTPT 316

Query: 320 CSGVGIGSEMSGGISNITIEDLNIWDSAAGIRIKSDQGRGGYIANVSISNIVMNRVKMAI 379
           CSGVGIGSEMSGGISNITIEDLN+WDSAAGIRIKSDQGRGGYIANVSI+N VMNRVKMAI
Sbjct: 317 CSGVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYIANVSITNFVMNRVKMAI 376

Query: 380 RFSRGSNDHPDEKWDPKAVPKVKGIFISNITSLNSTKAPVLDGIKGTLYDGVCMKNVTIL 439
           RFSRGSNDHPDE++DPKAVPKVKGIFI+N+ SLNSTKAPVL GI GT YDGVCMKNVTIL
Sbjct: 377 RFSRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYGIAGTSYDGVCMKNVTIL 436

Query: 440 GLAPSAKWHCAFVLGFSSAVFPTPCPQLQNITFSSLCA 477
           GL PSAKWHCAFV GFS++VFPTPCPQLQN TFSSLC+
Sbjct: 437 GLTPSAKWHCAFVSGFSTSVFPTPCPQLQNTTFSSLCS 470

[Close]

BLAST of Sed0015910 vs. TAIR 10
Match: AT4G33440.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 664.8 bits (1714), Expect = 5.0e-191
Identity = 310/448 (69.20%), Postives = 378/448 (84.38%), Query Frame = 0


Query: 20  SWSSLLLLLVFIAFVTLQIATRTPFPVWAAQPPPPSHEP-SCAAFFRRDEAAAPLVVMSI 79
           SW+ LLL+   +A ++LQI++ +  P+W   P     +P +C+ FF  D      +VMSI
Sbjct: 18  SWAFLLLVFTVLAILSLQISSNSFLPLWI--PTSQYDDPVTCSGFFNHD-PFPNRIVMSI 77

Query: 80  ADFGGVGDGRTSNTEAFRKAIHYMRRFAHHGGSTLSLPPGTWLTGSFNLTSNFTLFLQPG 139
            DFGGVGDG+TSNT AFR+A+ ++  FA  GG+ L++P GTWL+GSFNLTSNFTLFL+ G
Sbjct: 78  TDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSNFTLFLERG 137

Query: 140 AILLASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNGLSNVVITGENGTIDGQGKMW 199
           A++L S+D DEWPIIEPLPSYGRGRER GGRHISLIHG+ L+NVVITGENGTIDGQGKMW
Sbjct: 138 ALILGSKDLDEWPIIEPLPSYGRGRERPGGRHISLIHGDNLTNVVITGENGTIDGQGKMW 197

Query: 200 WELWWNRTLNHTRGHLVEFMNSHNILISNLTFKNSPFWTVHPVYCSNVVIKNMTILAPLN 259
           WELWWNRTL HTRGHL+E  NSHNILISNLT  NSPFWT+HPVYCSNVVI+NMTILAP+N
Sbjct: 198 WELWWNRTLVHTRGHLIELKNSHNILISNLTLLNSPFWTIHPVYCSNVVIRNMTILAPMN 257

Query: 260 APNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDHYGIKLARPSSNIIIRRVSGTTPT 319
           APNTDGIDPDSSTN+CIEDCYIESGDDLVAVKSGWD YG+ +ARPSSNI+IRR+SGTT T
Sbjct: 258 APNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGTTRT 317

Query: 320 CSGVGIGSEMSGGISNITIEDLNIWDSAAGIRIKSDQGRGGYIANVSISNIVMNRVKMAI 379
           CSGVGIGSEMSGGI NIT+ED+++WDSAAG+RIK+D+GRGGYI+N++ +N+++ +VK+ I
Sbjct: 318 CSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVPI 377

Query: 380 RFSRGSNDHPDEKWDPKAVPKVKGIFISNITSLNSTKAPVLDGIKGTLYDGVCMKNVTIL 439
           RFS GSNDH D+KWDPKA+P+VKGI+ISN+ SLNS KAP+L G++GT +  VC++NVT+L
Sbjct: 378 RFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVTLL 437

Query: 440 GLAPSAKWHCAFVLGFSSAVFPTPCPQL 467
           GL  + KW C  V G++S VFP  CPQL
Sbjct: 438 GLPKTEKWKCKDVSGYASDVFPLSCPQL 462

[Close]

BLAST of Sed0015910 vs. TAIR 10
Match: AT4G23820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 466.8 bits (1200), Expect = 2.0e-131
Identity = 219/402 (54.48%), Postives = 295/402 (73.38%), Query Frame = 0


Query: 76  MSIADFGGVGDGRTSNTEAFRKAIHYMRRFAHHGGSTLSLPPGTWLTGSFNLTSNFTLFL 135
           +SI DFGGVGDGRT NT+AFR AI+ ++     GG+ L +PPG +LT SFNLTS+ TL+L
Sbjct: 41  ISITDFGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTLYL 100

Query: 136 QPGAILLASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNGLSNVVITGENGTIDGQG 195
             GA++ A QD   WP+I+PLPSYGRGRE  GGR++S IHG+GL +VVITG+NGTIDGQG
Sbjct: 101 AKGAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQNGTIDGQG 160

Query: 196 KMWWELWWNRTLNHTRGHLVEFMNSHNILISNLTFKNSPFWTVHPVYCSNVVIKNMTILA 255
           ++WW +W +RTL +TR +L+EF +S  I+ISN+ F+NSPFW +HPVYCSNVVI ++TILA
Sbjct: 161 EVWWNMWRSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHVTILA 220

Query: 256 PLNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDHYGIKLARPSSNIIIRRVSGT 315
           P ++PNTDGIDPDSS N+CIED YI +GDDLVA+KSGWD YGI   RPSSNI IRR++G+
Sbjct: 221 PQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDQYGIAYGRPSSNITIRRITGS 280

Query: 316 TPTCSGVGIGSEMSGGISNITIEDLNIWDSAAGIRIKSDQGRGGYIANVSISNIVMNRVK 375
           +P  +G+ IGSE SGGI NI  E + + +   G+ IK++ GRGGYI N+ IS++ ++  K
Sbjct: 281 SP-FAGIAIGSETSGGIKNIIAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYVDTAK 340

Query: 376 MAIRFSRGSNDHPDEKWDPKAVPKVKGIFISNITSLNSTKAPVLDGIKGTLYDGVCMKNV 435
             I+ +  + DHPDE ++P A+P VKGI I N+  +N   A  + G+KG+ + G+C+  +
Sbjct: 341 YGIKIAGDTGDHPDENYNPNALPVVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEI 400

Query: 436 TILGLAPSAK-WHCAFVLGFSSAVFPTPCPQLQNITFSSLCA 477
            + G   S K W C+ V G S  V P PC +L+    S+LC+
Sbjct: 401 NLHGSLNSYKTWKCSDVSGTSLKVSPWPCSELRTTGGSNLCS 441

[Close]

BLAST of Sed0015910 vs. TAIR 10
Match: AT3G62110.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 461.8 bits (1187), Expect = 6.5e-130
Identity = 221/399 (55.39%), Postives = 289/399 (72.43%), Query Frame = 0


Query: 76  MSIADFGGVGDGRTSNTEAFRKAIHYMRRFAHHGGSTLSLPPGTWLTGSFNLTSNFTLFL 135
           +SI +FG VGDG T NT+AF+ A+ Y+  F+  GG+ L +P G WLTGSF+L S+ TL+L
Sbjct: 43  VSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHLTLWL 102

Query: 136 QPGAILLASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNGLSNVVITGENGTIDGQG 195
             GA +L S   + WP+++PLPSYGRGRE  G RH SLI+G  L++VVITGENGTIDGQG
Sbjct: 103 DKGATILGSTSSENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTIDGQG 162

Query: 196 KMWWELWWNRTLNHTRGHLVEFMNSHNILISNLTFKNSPFWTVHPVYCSNVVIKNMTILA 255
            +WW+ + N  LN+TR HLVE MNS  ++ISNLTF NSPFW +HPVYC +VV+KN+TILA
Sbjct: 163 TVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNLTILA 222

Query: 256 PLNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDHYGIKLARPSSNIIIRRVSGT 315
           PL +PNTDG+DPDSSTN+CIEDCYI +GDDLV++KSGWD YGI  ARPSS I I R++G 
Sbjct: 223 PLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQ 282

Query: 316 TPTCSGVGIGSEMSGGISNITIEDLNIWDSAAGIRIKSDQGRGGYIANVSISNIVMNRVK 375
           T + SG+ IGSEMSGG+S I I+DL++++S  GIRIK+  GRGGY+ NV I N+ ++ VK
Sbjct: 283 TTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKLDNVK 342

Query: 376 MAIRFSRGSNDHPDEKWDPKAVPKVKGIFISNITSLNSTKAPVLDGIKGTLYDGVCMKNV 435
            AIRF+    +HPDEK+DPKA+P ++ I   N+       A +L+GI+G ++  +C  NV
Sbjct: 343 KAIRFTGKYGEHPDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNICFLNV 402

Query: 436 TILGLAPSAK--WHCAFVLGFSSAVFP-TPCPQLQNITF 472
           T+     S K  W C+ V G+S  V P   C  L+   F
Sbjct: 403 TLRVKKNSKKSPWECSNVRGYSQWVSPEITCDSLKESIF 441

[Close]

BLAST of Sed0015910 vs. TAIR 10
Match: AT5G41870.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 442.6 bits (1137), Expect = 4.1e-124
Identity = 208/397 (52.39%), Postives = 291/397 (73.30%), Query Frame = 0


Query: 75  VMSIADFGGVGDGRTSNTEAFRKAIHYMRRFAH-HGGSTLSLPPGTWLTGSFNLTSNFTL 134
           ++SI+DFG VGDG+T NT+AF  AI  +R   + + G+ L +P G +LT SFNLTS+ TL
Sbjct: 44  MLSISDFGAVGDGKTLNTKAFNSAIDRIRNSNNSNEGTLLYVPRGVYLTQSFNLTSHMTL 103

Query: 135 FLQPGAILLASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNGLSNVVITGENGTIDG 194
           +L  GA++ A QD ++WP+ +PLPSYGRGRE  G R+IS IHG+GL++VVITG NGTIDG
Sbjct: 104 YLADGAVIKAVQDTEKWPLTDPLPSYGRGREHPGRRYISFIHGDGLNDVVITGRNGTIDG 163

Query: 195 QGKMWWELWWNRTLNHTRGHLVEFMNSHNILISNLTFKNSPFWTVHPVYCSNVVIKNMTI 254
           QG+ WW +W + TL  TR  L+EF NS NIL+S++  +NSPFWT+HPVYCSNVV+ ++TI
Sbjct: 164 QGEPWWNMWRHGTLKFTRPGLIEFNNSTNILVSHVVLQNSPFWTLHPVYCSNVVVHHVTI 223

Query: 255 LAPLNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDHYGIKLARPSSNIIIRRVS 314
           LAP ++ NTDGIDPDSS+N+CIED YI +GDDLVAVKSGWD YGI   RPS +I IRR++
Sbjct: 224 LAPTDSYNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNRPSRDITIRRIT 283

Query: 315 GTTPTCSGVGIGSEMSGGISNITIEDLNIWDSAAGIRIKSDQGRGGYIANVSISNIVMNR 374
           G++P  +G+ IGSE SGGI N+T+E++ +++S  GI IK++ GRGG I  ++IS + + +
Sbjct: 284 GSSP-FAGIAIGSETSGGIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVYLEK 343

Query: 375 VKMAIRFSRGSNDHPDEKWDPKAVPKVKGIFISNITSLNSTKAPVLDGIKGTLYDGVCMK 434
           V+  I+ S  + DHPD+K++  A+P V+GI I N+  +   +A ++ G+K + +  +C  
Sbjct: 344 VRTGIKISGDTGDHPDDKFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNLCFS 403

Query: 435 NVTILGLAPSAKWHCAFVLGFSSAVFPTPCPQLQNIT 471
           NVT+ G   S  W C+ V+G +  V PTPCP+L   T
Sbjct: 404 NVTLTGTKRSPIWKCSDVVGAADKVNPTPCPELSATT 439

[Close]

BLAST of Sed0015910 vs. TAIR 10
Match: AT3G48950.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 416.0 bits (1068), Expect = 4.1e-116
Identity = 203/393 (51.65%), Postives = 271/393 (68.96%), Query Frame = 0


Query: 78  IADFGGVGDGRTSNTEAFRKAIHYMRRFAHHGGSTLSLPPGTWLTGSFNLTSNFTLFLQP 137
           + DFG VGDG+TSNT+AFR AI  + + A  GG+ L +PPG WLTGSFNLTS+FTLF+Q 
Sbjct: 47  LTDFGAVGDGKTSNTKAFRNAISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQR 106

Query: 138 GAILLASQDPDEWPIIEPLPSYGRGRERLG-GRHISLIHGNGLSNVVITGENGTIDGQGK 197
           GA +LASQD  EWP+I PLPSYG+GR+  G GR  SLI G  L++VVITG NGTI+GQG+
Sbjct: 107 GATILASQDESEWPVIAPLPSYGKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQ 166

Query: 198 MWWELWWNRTLNHTRGHLVEFMNSHNILISNLTFKNSPFWTVHPVYCSNVVIKNMTILAP 257
            WW+ +  +    TR +L+E + S NI ISN+T  +SP W +HPVYC++V++K++T+LAP
Sbjct: 167 YWWDKFKKKQFKITRPYLIEILFSKNIQISNITLIDSPSWNIHPVYCNSVIVKSVTVLAP 226

Query: 258 LNAPNTDGIDPDSSTNICIEDCYIESGDDLVAVKSGWDHYGIKLARPSSNIIIRRVSGTT 317
           +  PNTDGI+PDS TN  IEDCYI SGDD +AVKSGWD YGIK   P+  + IRR++  +
Sbjct: 227 VTVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCIS 286

Query: 318 PTCSGVGIGSEMSGGISNITIEDLNIWDSAAGIRIKSDQGRGGYIANVSISNIVMNRVKM 377
           P  +GV +GSEMSGGI ++ IED+ + ++ + IRIK+  GRG Y+ ++    I M  +K 
Sbjct: 287 PKSAGVALGSEMSGGIKDVRIEDVTLTNTESAIRIKTAVGRGAYVKDIYARRITMKTMKY 346

Query: 378 AIRFSRGSNDHPDEKWDPKAVPKVKGIFISNITSLNSTKAPVLDGIKGTLYDGVCMKNVT 437
               S     HPDE +DPKA+P++  I   ++T+ N T +  LDGI    + G+C+ NVT
Sbjct: 347 VFWMSGNYGSHPDEGFDPKALPEITNINYRDMTAENVTMSASLDGIDKDPFTGICISNVT 406

Query: 438 ILGLAPSAK---WHCAFVLGFSSAVFPTPCPQL 467
           I  LA  AK   W+C  V G +S V P PC  L
Sbjct: 407 I-ALAAKAKKMQWNCTDVAGVTSRVTPEPCSLL 438

The following BLAST results are available for this feature:

BLAST of Sed0015910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946971.1	7.7e-234	83.92	probable polygalacturonase [Cucurbita moschata]	[more]
XP_023533571.1	1.5e-232	86.09	probable polygalacturonase [Cucurbita pepo subsp. pepo]	[more]
XP_023007164.1	4.2e-232	85.68	probable polygalacturonase [Cucurbita maxima]	[more]
XP_038900759.1	5.2e-230	82.46	probable polygalacturonase [Benincasa hispida]	[more]
KAA0040757.1	6.7e-230	85.81	putative polygalacturonase [Cucumis melo var. makuwa]	[more]

BLAST of Sed0015910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7PZL3	4.1e-113	50.50	Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 ...	[more]
Q8RY29	6.9e-28	28.09	Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2	[more]
Q9LW07	5.0e-26	27.08	Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g1572...	[more]
O23147	4.7e-24	26.26	Polygalacturonase ADPG1 OS=Arabidopsis thaliana OX=3702 GN=ADPG1 PE=2 SV=1	[more]
Q02096	6.1e-24	26.37	Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1	[more]

BLAST of Sed0015910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G526	3.7e-234	83.92	probable polygalacturonase OS=Cucurbita moschata OX=3662 GN=LOC111450990 PE=3 SV...	[more]
A0A6J1L474	2.0e-232	85.68	probable polygalacturonase OS=Cucurbita maxima OX=3661 GN=LOC111499740 PE=3 SV=1	[more]
A0A5A7TGP3	3.3e-230	85.81	Putative polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3CDX7	3.3e-230	85.81	probable polygalacturonase OS=Cucumis melo OX=3656 GN=LOC103499630 PE=3 SV=1	[more]
A0A0A0LJW9	1.2e-229	85.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G334510 PE=3 SV=1	[more]

BLAST of Sed0015910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33440.1	5.0e-191	69.20	Pectin lyase-like superfamily protein	[more]
AT4G23820.1	2.0e-131	54.48	Pectin lyase-like superfamily protein	[more]
AT3G62110.1	6.5e-130	55.39	Pectin lyase-like superfamily protein	[more]
AT5G41870.1	4.1e-124	52.39	Pectin lyase-like superfamily protein	[more]
AT3G48950.1	4.1e-116	51.65	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 332..353 e-value: 12.0 score: 14.9 coord: 400..434 e-value: 3400.0 score: 3.4 coord: 270..302 e-value: 580.0 score: 8.9 coord: 243..269 e-value: 680.0 score: 8.4 coord: 304..326 e-value: 4800.0 score: 2.3
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 173..450 e-value: 6.5E-44 score: 150.3
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 62..451 e-value: 7.5E-115 score: 386.2
None	No IPR available	PANTHER	PTHR31339:SF4	PECTIN LYASE-LIKE SUPERFAMILY PROTEIN	coord: 16..475
None	No IPR available	PANTHER	PTHR31339	PECTIN LYASE-RELATED	coord: 16..475
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 71..467

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015910.1	Sed0015910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004650	polygalacturonase activity