Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTTTCTTTGGAACTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTCTCTCTTCTCATGGATGATAGCGAAGACCCTCTTCCTCATCATCCACATGTTTCTCTTCAGGTACTCCTCTTTCAAAATTTCAATCAGTTCGCCACAGCTGCACGGTTAATACGTTTTTCTAAGAGGTCATAGGTTCGAATCCTCGATCAAAACGAGGGTAGGTTGTAATAGTTTCAGATTTTCAATCACTTTGAGTCTTGTCCAATCTGAACCTACTTTAGTTTCTCTGTTGTTTCTATGAATTCAAATAAGATTTGATCAATATGCAGGCTTTCTCTCATGTTAGCCACCACCAGCCCACACAGCCACTCGTGGTGCATGACCATGCCACCGCTGCCGCCGTGGCCGCCGCATACAACGGCGTATGCAAGGGGACCGGTGTGTTCATCCCTAGGTCTCTGAAGCCTGCAAAAAAACAGAGGCGTGGAAGGTACAATAACATGAAGGCAAGACAGTTTCCAATCGCTATTGATGTGGTGAACTCACAAGTATCCAACAACAATTCGTTGCGTCCGAAAAAGGGTTAA
mRNA sequence
ATGGAAGTTTCTTTGGAACTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTCTCTCTTCTCATGGATGATAGCGAAGACCCTCTTCCTCATCATCCACATGTTTCTCTTCAGGCTTTCTCTCATGTTAGCCACCACCAGCCCACACAGCCACTCGTGGTGCATGACCATGCCACCGCTGCCGCCGTGGCCGCCGCATACAACGGCGTATGCAAGGGGACCGGTGTGTTCATCCCTAGGTCTCTGAAGCCTGCAAAAAAACAGAGGCGTGGAAGGTACAATAACATGAAGGCAAGACAGTTTCCAATCGCTATTGATGTGGTGAACTCACAAGTATCCAACAACAATTCGTTGCGTCCGAAAAAGGGTTAA
Coding sequence (CDS)
ATGGAAGTTTCTTTGGAACTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTCTCTCTTCTCATGGATGATAGCGAAGACCCTCTTCCTCATCATCCACATGTTTCTCTTCAGGCTTTCTCTCATGTTAGCCACCACCAGCCCACACAGCCACTCGTGGTGCATGACCATGCCACCGCTGCCGCCGTGGCCGCCGCATACAACGGCGTATGCAAGGGGACCGGTGTGTTCATCCCTAGGTCTCTGAAGCCTGCAAAAAAACAGAGGCGTGGAAGGTACAATAACATGAAGGCAAGACAGTTTCCAATCGCTATTGATGTGGTGAACTCACAAGTATCCAACAACAATTCGTTGCGTCCGAAAAAGGGTTAA
Protein sequence
MEVSLELEDDLFFADLSRQLSLLMDDSEDPLPHHPHVSLQAFSHVSHHQPTQPLVVHDHATAAAVAAAYNGVCKGTGVFIPRSLKPAKKQRRGRYNNMKARQFPIAIDVVNSQVSNNNSLRPKKG
Homology
BLAST of Sed0015868 vs. NCBI nr
Match:
XP_022933798.1 (uncharacterized protein LOC111441102 [Cucurbita moschata] >XP_022933806.1 uncharacterized protein LOC111441102 [Cucurbita moschata])
HSP 1 Score: 188.3 bits (477), Expect = 3.9e-44
Identity = 104/127 (81.89%), Postives = 113/127 (88.98%), Query Frame = 0
Query: 1 MEVSLELEDDLFFADLSRQLS-LLMDDSEDPLPHHPHVSLQAFSHVSHHQPTQPLVVHDH 60
MEV+LELEDDLFFADLSRQLS LLMDD+EDPLPHHPHVSLQA +H HQP +PL VHD
Sbjct: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAH-GGHQPARPLAVHDQ 60
Query: 61 ATAAAVAAAYNGVCKGTGVFIPRSLKPAKKQRRGRYNNMKA-RQFPIAIDVVNSQVSNNN 120
A AAA+ AY+GV KGTGVFIPRSL+PA+KQRRGRYNN+KA RQFPIAID VNSQVSNNN
Sbjct: 61 A-AAAIVVAYSGVSKGTGVFIPRSLQPARKQRRGRYNNIKANRQFPIAID-VNSQVSNNN 120
Query: 121 SLRPKKG 126
SLRPKKG
Sbjct: 121 SLRPKKG 124
BLAST of Sed0015868 vs. NCBI nr
Match:
XP_022973676.1 (uncharacterized protein LOC111472261 [Cucurbita maxima])
HSP 1 Score: 188.0 bits (476), Expect = 5.1e-44
Identity = 103/127 (81.10%), Postives = 113/127 (88.98%), Query Frame = 0
Query: 1 MEVSLELEDDLFFADLSRQLS-LLMDDSEDPLPHHPHVSLQAFSHVSHHQPTQPLVVHDH 60
MEV+LELEDDLFFADLSRQLS LLMDD+EDPLPHHPHVSLQA +H HQP +PL VHD
Sbjct: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAH-GGHQPARPLAVHDQ 60
Query: 61 ATAAAVAAAYNGVCKGTGVFIPRSLKPAKKQRRGRYNNMKA-RQFPIAIDVVNSQVSNNN 120
A AAA+ AAY+GV KGTGVFIPRSL+PA+KQRRGRYNN+KA RQFPI +D VNSQVSNNN
Sbjct: 61 A-AAAIVAAYSGVSKGTGVFIPRSLQPARKQRRGRYNNIKANRQFPITVD-VNSQVSNNN 120
Query: 121 SLRPKKG 126
SLRPKKG
Sbjct: 121 SLRPKKG 124
BLAST of Sed0015868 vs. NCBI nr
Match:
XP_023539236.1 (uncharacterized protein LOC111799938 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 188.0 bits (476), Expect = 5.1e-44
Identity = 104/127 (81.89%), Postives = 113/127 (88.98%), Query Frame = 0
Query: 1 MEVSLELEDDLFFADLSRQLS-LLMDDSEDPLPHHPHVSLQAFSHVSHHQPTQPLVVHDH 60
MEV+LELEDDLFFADLSRQLS LLMDD+EDPLPHHPHVSLQA +H HQP +PL VHD
Sbjct: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAH-GGHQPARPLAVHDQ 60
Query: 61 ATAAAVAAAYNGVCKGTGVFIPRSLKPAKKQRRGRYNNMKA-RQFPIAIDVVNSQVSNNN 120
A AAA+ AAY+GV KGTGVFIPRSL+PA+KQRRGRYNN+KA RQFPIAID VNSQVSNNN
Sbjct: 61 A-AAAIVAAYSGVSKGTGVFIPRSLQPARKQRRGRYNNIKANRQFPIAID-VNSQVSNNN 120
Query: 121 SLRPKKG 126
SL PKKG
Sbjct: 121 SLHPKKG 124
BLAST of Sed0015868 vs. NCBI nr
Match:
KAG6597461.1 (hypothetical protein SDJN03_10641, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 186.8 bits (473), Expect = 1.1e-43
Identity = 104/127 (81.89%), Postives = 113/127 (88.98%), Query Frame = 0
Query: 1 MEVSLELEDDLFFADLSRQLS-LLMDDSEDPLPHHPHVSLQAFSHVSHHQPTQPLVVHDH 60
MEV+LELEDDLFFADLSRQLS LLMDD+EDPLPHHPHVSLQA +H HQP +PL VHD
Sbjct: 12 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAH-GGHQPARPLAVHDQ 71
Query: 61 ATAAAVAAAYNGVCKGTGVFIPRSLKPAKKQRRGRYNNMKA-RQFPIAIDVVNSQVSNNN 120
A AAA+ AAY+GV KGTGVFIPRSL+ A+KQRRGRYNN+KA RQFPIAID VNSQVSNNN
Sbjct: 72 A-AAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKANRQFPIAID-VNSQVSNNN 131
Query: 121 SLRPKKG 126
SLRPKKG
Sbjct: 132 SLRPKKG 135
BLAST of Sed0015868 vs. NCBI nr
Match:
KAG7028920.1 (hypothetical protein SDJN02_10103 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 186.8 bits (473), Expect = 1.1e-43
Identity = 104/127 (81.89%), Postives = 113/127 (88.98%), Query Frame = 0
Query: 1 MEVSLELEDDLFFADLSRQLS-LLMDDSEDPLPHHPHVSLQAFSHVSHHQPTQPLVVHDH 60
MEV+LELEDDLFFADLSRQLS LLMDD+EDPLPHHPHVSLQA +H HQP +PL VHD
Sbjct: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAH-GGHQPARPLAVHDQ 60
Query: 61 ATAAAVAAAYNGVCKGTGVFIPRSLKPAKKQRRGRYNNMKA-RQFPIAIDVVNSQVSNNN 120
A AAA+ AAY+GV KGTGVFIPRSL+ A+KQRRGRYNN+KA RQFPIAID VNSQVSNNN
Sbjct: 61 A-AAAIVAAYSGVSKGTGVFIPRSLQSARKQRRGRYNNIKANRQFPIAID-VNSQVSNNN 120
Query: 121 SLRPKKG 126
SLRPKKG
Sbjct: 121 SLRPKKG 124
BLAST of Sed0015868 vs. ExPASy TrEMBL
Match:
A0A6J1F5U9 (uncharacterized protein LOC111441102 OS=Cucurbita moschata OX=3662 GN=LOC111441102 PE=4 SV=1)
HSP 1 Score: 188.3 bits (477), Expect = 1.9e-44
Identity = 104/127 (81.89%), Postives = 113/127 (88.98%), Query Frame = 0
Query: 1 MEVSLELEDDLFFADLSRQLS-LLMDDSEDPLPHHPHVSLQAFSHVSHHQPTQPLVVHDH 60
MEV+LELEDDLFFADLSRQLS LLMDD+EDPLPHHPHVSLQA +H HQP +PL VHD
Sbjct: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAH-GGHQPARPLAVHDQ 60
Query: 61 ATAAAVAAAYNGVCKGTGVFIPRSLKPAKKQRRGRYNNMKA-RQFPIAIDVVNSQVSNNN 120
A AAA+ AY+GV KGTGVFIPRSL+PA+KQRRGRYNN+KA RQFPIAID VNSQVSNNN
Sbjct: 61 A-AAAIVVAYSGVSKGTGVFIPRSLQPARKQRRGRYNNIKANRQFPIAID-VNSQVSNNN 120
Query: 121 SLRPKKG 126
SLRPKKG
Sbjct: 121 SLRPKKG 124
BLAST of Sed0015868 vs. ExPASy TrEMBL
Match:
A0A6J1I9A5 (uncharacterized protein LOC111472261 OS=Cucurbita maxima OX=3661 GN=LOC111472261 PE=4 SV=1)
HSP 1 Score: 188.0 bits (476), Expect = 2.5e-44
Identity = 103/127 (81.10%), Postives = 113/127 (88.98%), Query Frame = 0
Query: 1 MEVSLELEDDLFFADLSRQLS-LLMDDSEDPLPHHPHVSLQAFSHVSHHQPTQPLVVHDH 60
MEV+LELEDDLFFADLSRQLS LLMDD+EDPLPHHPHVSLQA +H HQP +PL VHD
Sbjct: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAH-GGHQPARPLAVHDQ 60
Query: 61 ATAAAVAAAYNGVCKGTGVFIPRSLKPAKKQRRGRYNNMKA-RQFPIAIDVVNSQVSNNN 120
A AAA+ AAY+GV KGTGVFIPRSL+PA+KQRRGRYNN+KA RQFPI +D VNSQVSNNN
Sbjct: 61 A-AAAIVAAYSGVSKGTGVFIPRSLQPARKQRRGRYNNIKANRQFPITVD-VNSQVSNNN 120
Query: 121 SLRPKKG 126
SLRPKKG
Sbjct: 121 SLRPKKG 124
BLAST of Sed0015868 vs. ExPASy TrEMBL
Match:
A0A0A0LAE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149910 PE=4 SV=1)
HSP 1 Score: 176.0 bits (445), Expect = 9.7e-41
Identity = 101/128 (78.91%), Postives = 113/128 (88.28%), Query Frame = 0
Query: 1 MEVSLELEDDLFFADLSRQLS-LLMDDSEDPLPHHPHVSLQAFSHVSHHQPTQPLVVHDH 60
MEV+LELEDDLFFADLSRQLS LLMDD+EDPLP HPHVSLQA SH H+ PT+PL H+H
Sbjct: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLP-HPHVSLQALSHGVHY-PTRPLATHEH 60
Query: 61 ATAAAVAAAYNGVCKGTGVFIPRSLKPAKKQRRGRYNNMKA-RQFPIAIDVVNSQV-SNN 120
A AAAVAAAYNGV KGTGVFIPRSL+PA+KQRRGR+NN+K RQF I+ID VNSQV SNN
Sbjct: 61 AAAAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISID-VNSQVPSNN 120
Query: 121 NSLRPKKG 126
+S+RPKKG
Sbjct: 121 HSMRPKKG 125
BLAST of Sed0015868 vs. ExPASy TrEMBL
Match:
A0A5D3D068 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00190 PE=4 SV=1)
HSP 1 Score: 167.2 bits (422), Expect = 4.5e-38
Identity = 100/128 (78.12%), Postives = 111/128 (86.72%), Query Frame = 0
Query: 1 MEVSLELEDDLFFADLSRQLS-LLMDDSEDPLPHHPHVSLQAFSHVSHHQPTQPLVVHDH 60
MEV+LELEDDLFFADLSRQLS LLMDD+EDPLP PHVSLQA SH H+ PT+PL H+H
Sbjct: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLP-RPHVSLQALSHGVHY-PTRPLATHEH 60
Query: 61 ATAAAVAAAYNGVCKGTGVFIPRSLKPAKKQRRGRYNNMKA-RQFPIAIDVVNSQVSNNN 120
A AAAVAAAYNGV KGTGVFIPRSL+PA+KQRRGR+NN+K RQF I+ID VNSQVS+NN
Sbjct: 61 A-AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISID-VNSQVSSNN 120
Query: 121 SL-RPKKG 126
L RPKKG
Sbjct: 121 HLMRPKKG 124
BLAST of Sed0015868 vs. ExPASy TrEMBL
Match:
A0A1S3AX25 (uncharacterized protein LOC103483733 OS=Cucumis melo OX=3656 GN=LOC103483733 PE=4 SV=1)
HSP 1 Score: 167.2 bits (422), Expect = 4.5e-38
Identity = 100/128 (78.12%), Postives = 111/128 (86.72%), Query Frame = 0
Query: 1 MEVSLELEDDLFFADLSRQLS-LLMDDSEDPLPHHPHVSLQAFSHVSHHQPTQPLVVHDH 60
MEV+LELEDDLFFADLSRQLS LLMDD+EDPLP PHVSLQA SH H+ PT+PL H+H
Sbjct: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLP-RPHVSLQALSHGVHY-PTRPLATHEH 60
Query: 61 ATAAAVAAAYNGVCKGTGVFIPRSLKPAKKQRRGRYNNMKA-RQFPIAIDVVNSQVSNNN 120
A AAAVAAAYNGV KGTGVFIPRSL+PA+KQRRGR+NN+K RQF I+ID VNSQVS+NN
Sbjct: 61 A-AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISID-VNSQVSSNN 120
Query: 121 SL-RPKKG 126
L RPKKG
Sbjct: 121 HLMRPKKG 124
BLAST of Sed0015868 vs. TAIR 10
Match:
AT3G06070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19190.1); Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 57.0 bits (136), Expect = 1.3e-08
Identity = 44/132 (33.33%), Postives = 72/132 (54.55%), Query Frame = 0
Query: 1 MEVSLELEDDLFFADLSRQLSLLM--DDSEDPLPHHPHVSLQAFSHVSHHQPTQPLVVHD 60
M + LEL+DD+FFAD+S+QL+LL+ +D ++P+ VS Q ++ P ++++
Sbjct: 1 MAMELELDDDVFFADISKQLNLLITDEDEQNPISLSSSVSFQGLFRGNYQTSATPYMMYN 60
Query: 61 HATAAAVAAAYNGV--CKGTGVFIPRSLKPAKK-------QRRGRY--NNMKARQFPIAI 120
YN + KGTGVFIPRS +P +K +++GR+ + + +QFP
Sbjct: 61 E------QINYNVIRESKGTGVFIPRSSQPRRKHNHHPHQKKQGRFIGSFIPKQQFPHHG 120
BLAST of Sed0015868 vs. TAIR 10
Match:
AT5G19190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G06070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 56.2 bits (134), Expect = 2.1e-08
Identity = 39/106 (36.79%), Postives = 62/106 (58.49%), Query Frame = 0
Query: 1 MEVSLELEDDLFFADLSRQLSLLMDDSEDPLPHHPHVSLQAFSHVSHHQPTQPLVVHDHA 60
M + LEL+DD+FFAD+S+Q+SLL+ D ++ H++ + S S Q L +
Sbjct: 1 MAMELELDDDVFFADISKQISLLIMDEDE------HLNPVSLSSSSSSLSFQGLFRGGYQ 60
Query: 61 TAAAVAAAYNGVCKGTGVFIPRSLKPAKK----QRRGRYNNMKARQ 103
TA + KGTGVFIP+S +P ++ Q++GRY++ A+Q
Sbjct: 61 TAPYMYQQEQS--KGTGVFIPKSSQPRRRPHHHQKQGRYSSFNAKQ 98
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022933798.1 | 3.9e-44 | 81.89 | uncharacterized protein LOC111441102 [Cucurbita moschata] >XP_022933806.1 unchar... | [more] |
XP_022973676.1 | 5.1e-44 | 81.10 | uncharacterized protein LOC111472261 [Cucurbita maxima] | [more] |
XP_023539236.1 | 5.1e-44 | 81.89 | uncharacterized protein LOC111799938 [Cucurbita pepo subsp. pepo] | [more] |
KAG6597461.1 | 1.1e-43 | 81.89 | hypothetical protein SDJN03_10641, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7028920.1 | 1.1e-43 | 81.89 | hypothetical protein SDJN02_10103 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1F5U9 | 1.9e-44 | 81.89 | uncharacterized protein LOC111441102 OS=Cucurbita moschata OX=3662 GN=LOC1114411... | [more] |
A0A6J1I9A5 | 2.5e-44 | 81.10 | uncharacterized protein LOC111472261 OS=Cucurbita maxima OX=3661 GN=LOC111472261... | [more] |
A0A0A0LAE7 | 9.7e-41 | 78.91 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149910 PE=4 SV=1 | [more] |
A0A5D3D068 | 4.5e-38 | 78.13 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3AX25 | 4.5e-38 | 78.13 | uncharacterized protein LOC103483733 OS=Cucumis melo OX=3656 GN=LOC103483733 PE=... | [more] |
Match Name | E-value | Identity | Description | |
AT3G06070.1 | 1.3e-08 | 33.33 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT5G19190.1 | 2.1e-08 | 36.79 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |