Homology
BLAST of Sed0015855 vs. NCBI nr
Match:
XP_038903817.1 (zinc finger CCCH domain-containing protein 41 [Benincasa hispida] >XP_038903818.1 zinc finger CCCH domain-containing protein 41 [Benincasa hispida])
HSP 1 Score: 1405.2 bits (3636), Expect = 0.0e+00
Identity = 733/888 (82.55%), Postives = 768/888 (86.49%), Query Frame = 0
Query: 1 MELKVSYPNPDISSSDYVSDPEEKDISDDEDDDRNHKHRRREMQSQSSERDTREHVLRPY 60
MELKVSY P ISSSDYVSDPEEKDISDDEDDDRNHKHRRRE +SQS ERDT EHVLRPY
Sbjct: 1 MELKVSYSKPGISSSDYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTHEHVLRPY 60
Query: 61 GKRSKPFENGRSFRDNDSHGNEAWKSFNPPTFEKDVPGRFDKRRLGAVPGPRVAGDFNQR 120
GKRSKPFENGRSFRDNDS NEAWKSFN PT EKD PG+FDKRRLGAVPGPRVAGDFNQR
Sbjct: 61 GKRSKPFENGRSFRDNDSQANEAWKSFNTPTLEKDTPGKFDKRRLGAVPGPRVAGDFNQR 120
Query: 121 IRANHAFSGDLSFGRGRGRESGTWKQF-------DIASQIVQHGSFPPSLFAGRGLPSVS 180
IRAN F GDLS GRGRGRESGTW QF DIASQIV HGSFPPSLFAGRGLPSVS
Sbjct: 121 IRANQTFLGDLSSGRGRGRESGTWNQFDSRFSPVDIASQIVHHGSFPPSLFAGRGLPSVS 180
Query: 181 TAQTAPWNAYGLIPGIPNSGLETMHSLGLQGTLRPPNNPPLNIGMPRQRCRDFEERGFCL 240
TAQT PWNA+GLIPGIPNSGLE++H +GLQGTLRPP NPPLNIGMPRQRCRDFEERGFCL
Sbjct: 181 TAQTTPWNAFGLIPGIPNSGLESIHPIGLQGTLRPPINPPLNIGMPRQRCRDFEERGFCL 240
Query: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTILMSGKGL 300
RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNA LMGKTTGSLP VSTSST +MSGKGL
Sbjct: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKTTGSLPAVSTSSTSVMSGKGL 300
Query: 301 LGKSSKPAVGDDSLAFHGVYSGSGSVAEADLYDPDQPLWNKNCPEKPNALSVMHSSKIGE 360
LGK+ KPAVGDDSL FHGVYSGS S AEADLYDPDQPLWN NCPEKPNALS MHSSKI E
Sbjct: 301 LGKNIKPAVGDDSLPFHGVYSGSASAAEADLYDPDQPLWNNNCPEKPNALSGMHSSKIDE 360
Query: 361 VESVIGDDPSDRNQVRKCDGANNGCTGRTTATSGSQVTSSSVWGRVGSRNRQDVIGKLDP 420
VES++GDDPSDRNQVRKCD +NGCT R ATSG+QVTSSSVWGRVGSRNRQDV GK DP
Sbjct: 361 VESLMGDDPSDRNQVRKCDAGDNGCTSRVAATSGAQVTSSSVWGRVGSRNRQDVKGKPDP 420
Query: 421 AVSSSGYHENEAKEHNEVLTRAQENSHKQKHMAQDDAHTKAGDLSLNTQSD--AMRTMRK 480
V++SG +NE KEH EVL N H+QKHMAQ+DAHTKAGDLS+ QSD AMRTMRK
Sbjct: 421 -VNASGCLDNETKEHTEVLASVPGNPHQQKHMAQNDAHTKAGDLSIKAQSDANAMRTMRK 480
Query: 481 PSQKAMRTLFVNGIPQQSNRAELILSHFKKYGEVIDIYIPANSQHAFVQFSKREEAEAAL 540
PSQKAMRTLFVNGIP QSN+ E +LSHF KYGEVIDIYIPANSQ AFVQFSKREEAEAAL
Sbjct: 481 PSQKAMRTLFVNGIPLQSNKTETLLSHFNKYGEVIDIYIPANSQRAFVQFSKREEAEAAL 540
Query: 541 KSPDAVMGNRFIKLWWANRDNIPDDGVSINNGIHVHPRHIAAASLPSLVVKGKNSVQVST 600
KSPDAVMGNRFIKLWWANRD+IPDDGVS NNGIHV PRHIAAASLPSL VKGKNSVQVST
Sbjct: 541 KSPDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVPPRHIAAASLPSLAVKGKNSVQVST 600
Query: 601 SKGSISHPLEFSPVTADRSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLAMKRNDFR 660
SKGSISHPLE S D SHAFSSPKVSSPLQKKLENLEQLKEELRKKQEML MKRNDFR
Sbjct: 601 SKGSISHPLESSSAAPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLDMKRNDFR 660
Query: 661 RQLDKLEKQ-TGNKAEAIAGFSAKRLKVGIEAGISKLVTPKASNSSIALASSHIEVNEEH 720
RQLDKLEKQ TGNKAEA+ G SAKRLKVGIEA SKLVTPKAS+S IALAS H EVN EH
Sbjct: 661 RQLDKLEKQATGNKAEAVTGSSAKRLKVGIEADASKLVTPKASDSGIALASPHTEVNREH 720
Query: 721 VECPCPEPTTSTVQQESSKFEPVHSLAPKAPFDIDRKKLDSSSTGFRILPPLPAEFTNED 780
VE PCPE TTS VQQESSKFEPVH LA +APFDID +KL S TGF+ILPPL +F NED
Sbjct: 721 VEYPCPEATTSIVQQESSKFEPVHPLATEAPFDIDGEKLGSCLTGFKILPPLSVDFANED 780
Query: 781 VIKEHFSSLGDVCGVGLVSEDGDRASNASDICSANVTFLTRHSAERAFVDGKCWQGQPLK 840
VIK+HFSSLGDVC V LVSEDG+R SNAS+ CSANVTFLTRHSAERAF DGK WQGQ LK
Sbjct: 781 VIKKHFSSLGDVCTVELVSEDGNRISNASNNCSANVTFLTRHSAERAFEDGKSWQGQDLK 840
Query: 841 LVWLFSGKDPNGASSEASRDVDMEPESKSESILSKEIPKDRIREFNTR 879
+WL +DP GASS ASRD DMEPES+ E I K P D + +TR
Sbjct: 841 FIWLSGDEDPGGASSNASRDADMEPESEPEIIPFKVTPCDTESQNSTR 887
BLAST of Sed0015855 vs. NCBI nr
Match:
XP_022152149.1 (zinc finger CCCH domain-containing protein 41 [Momordica charantia])
HSP 1 Score: 1397.1 bits (3615), Expect = 0.0e+00
Identity = 720/886 (81.26%), Postives = 771/886 (87.02%), Query Frame = 0
Query: 1 MELKVSYPNPDISSSDYVSDPEEKDISDDEDDDRNHKHRRREMQSQSSERDTREHVLRPY 60
MELKVSYP P ISSSDYVSDPEEKDISDDEDDDRNHKHRRRE +SQS ERDTREHVLRPY
Sbjct: 1 MELKVSYPKPGISSSDYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVLRPY 60
Query: 61 GKRSKPFENGRSFRDNDSHGNEAWKSFNPPTFEKDVPGRFDKRRLGAVPGPRVAGDFNQR 120
GKR+KPFENGRSFR+N+S +EAWKSFN P FEKD+PG+FDKRRLGAVPGPR+ GDFNQR
Sbjct: 61 GKRNKPFENGRSFRENESQASEAWKSFNTPNFEKDIPGKFDKRRLGAVPGPRLTGDFNQR 120
Query: 121 IRANHAFSGDLSFGRGRGRESGTWKQF-------DIASQIVQHGSFPPSLFAGRGLPSVS 180
IRAN FSGDLS GRGRGRE GTW QF DIASQIV HGSFPPSLFAGRGLP+VS
Sbjct: 121 IRANQTFSGDLSAGRGRGREPGTWNQFDSRFSPVDIASQIVHHGSFPPSLFAGRGLPNVS 180
Query: 181 TAQTAPWNAYGLIPGIPNSGLETMHSLGLQGTLRPPNNPPLNIGMPRQRCRDFEERGFCL 240
TAQTAPWNA+GL+PG+PN+GLET+HS+GLQGTLRPP NPPLNIG+PRQRCRDFEERGFCL
Sbjct: 181 TAQTAPWNAFGLLPGMPNNGLETIHSIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL 240
Query: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTILMSGKGL 300
RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNA LMGK TGSLP VSTSST +MSGKGL
Sbjct: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKATGSLPAVSTSSTSVMSGKGL 300
Query: 301 LGKSSKPAVGDDSLAFHGVYSGSGSVAEADLYDPDQPLWNKNCPEKPNALSVMHSSKIGE 360
LGK+SKP VGDDSL F G YSGSG AEADLYDPDQPLWN NCPEK NALS MHSSKI E
Sbjct: 301 LGKNSKPGVGDDSLGF-GAYSGSGCAAEADLYDPDQPLWNNNCPEKSNALSAMHSSKIDE 360
Query: 361 VESVIGDDPSDRNQVRKCDGANNGCTGRTTATSGSQVTSSSVWGRVGSRNRQDVIGKLDP 420
VES++GDDPSDRNQVRKCD A+NGCT RTTA SGSQVTSSS+WGRVGSRNRQD GK+DP
Sbjct: 361 VESLMGDDPSDRNQVRKCDAADNGCTSRTTAASGSQVTSSSIWGRVGSRNRQDAKGKVDP 420
Query: 421 AVSSSGYHENEAKEHNEVLTRAQENSHKQKHMAQDDAHTKAGDLSLNTQSDAMRTMRKPS 480
VSSSG ENE KEHNEVLT Q NSH+QKHM QDDAHTKA QSD MRTMRKPS
Sbjct: 421 VVSSSGCLENEVKEHNEVLTSVQGNSHQQKHMVQDDAHTKA-------QSDTMRTMRKPS 480
Query: 481 QKAMRTLFVNGIPQQSNRAELILSHFKKYGEVIDIYIPANSQHAFVQFSKREEAEAALKS 540
QKA RTLFVNGIPQQSN+ E +LSHFKKYGEVIDIYIPANSQ AFVQFSKREEAEAALKS
Sbjct: 481 QKATRTLFVNGIPQQSNKTETLLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKS 540
Query: 541 PDAVMGNRFIKLWWANRDNIPDDGVSINNGIHVHPRHIAAASLPSLVVKGKNSVQVSTSK 600
PDAVMGNRFIKLWWANRD+IPDDGV NNGIHV PRHIAAASLPSL +KGKN+ QV TSK
Sbjct: 541 PDAVMGNRFIKLWWANRDSIPDDGVGSNNGIHVPPRHIAAASLPSLAIKGKNTGQVPTSK 600
Query: 601 GSISHPLEFSPVTADRSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLAMKRNDFRRQ 660
SI H L+ S D SHAF+SPKVSSPLQKKLENLEQLKEELRKKQEMLAMKRNDFRRQ
Sbjct: 601 VSIPHSLDSSLAAVDHSHAFNSPKVSSPLQKKLENLEQLKEELRKKQEMLAMKRNDFRRQ 660
Query: 661 LDKLEKQ-TGNKAEAIAGFSAKRLKVGIEAGISKLVTPKASNSSIALASSHIEVNEEHVE 720
LDKLEKQ TGNKAEA+ GFSAKRLKVG+EA ++KLVTPKAS+S IA AS H EVN E+VE
Sbjct: 661 LDKLEKQTTGNKAEAVIGFSAKRLKVGVEADVTKLVTPKASDSGIASASPHTEVNGENVE 720
Query: 721 CPCPEPTTSTVQQESSKFEPVHSLAPKAPFDIDRKKLDSSSTGFRILPPLPAEFTNEDVI 780
CP PEPTTST QQESSKF VH LA K+ FDID KKLDS +TGFRI+PPLPAEFTN DV+
Sbjct: 721 CPYPEPTTSTAQQESSKFGLVHPLASKSAFDIDTKKLDSCATGFRIVPPLPAEFTNVDVV 780
Query: 781 KEHFSSLGDVCGVGLVSEDGDRASNASDICSANVTFLTRHSAERAFVDGKCWQGQPLKLV 840
KEHFSS GDVC V LVSED +R SNAS+ CSANVTFLTRHSAERAF DGKCWQGQ LK +
Sbjct: 781 KEHFSSFGDVCTVELVSEDDNRVSNASNNCSANVTFLTRHSAERAFEDGKCWQGQDLKFI 840
Query: 841 WL-FSGKDPNGASSEASRDVDMEPESKSESILSKEIPKDRIREFNT 878
WL SGK+P+GAS EASRD DMEPES++ESI+ KE P+D N+
Sbjct: 841 WLSSSGKNPDGASPEASRDADMEPESEAESIVFKETPRDEEESENS 878
BLAST of Sed0015855 vs. NCBI nr
Match:
XP_023528107.1 (zinc finger CCCH domain-containing protein 41-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1382.9 bits (3578), Expect = 0.0e+00
Identity = 720/879 (81.91%), Postives = 764/879 (86.92%), Query Frame = 0
Query: 1 MELKVSYPNPDISSSDYVSDPEEKDISDDEDDDRNHKHRRREMQSQSSERDTREHVLRPY 60
MELKVSYP ISSS+YVSDPEEKDISDDEDDDRNHKHRRRE +SQS ERDTREHVLRPY
Sbjct: 1 MELKVSYPKLGISSSEYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVLRPY 60
Query: 61 GKRSKPFENGRSFRDNDSHGNEAWKSFNPPTFEKDVPGRFDKRRLGAVPGPRVAGDFNQR 120
GKRSKP ENGRS RDNDS NEAWKSFN PT EKD+PG+FDKRRLGAVPG R+AGDFNQR
Sbjct: 61 GKRSKPSENGRSIRDNDSQANEAWKSFNTPTLEKDIPGKFDKRRLGAVPGARLAGDFNQR 120
Query: 121 IRANHAFSGDLSFGRGRGRESGTWKQF-------DIASQIVQHGSFPPSLFAGRGLPSVS 180
IRAN FSGDLS GRGRGRESGTW QF DIASQIV G FPPSLFAGRGLPSVS
Sbjct: 121 IRANQTFSGDLSSGRGRGRESGTWNQFDSRFSPVDIASQIVHRGPFPPSLFAGRGLPSVS 180
Query: 181 TAQTAPWNAYGLIPGIPNSGLETMHSLGLQGTLRPPNNPPLNIGMPRQRCRDFEERGFCL 240
TAQTAPWNA+GL+PGIPNSGLETMH +GLQGTLRPP NPPLNIG+PRQRCRDFEERGFCL
Sbjct: 181 TAQTAPWNAFGLLPGIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL 240
Query: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTILMSGKGL 300
RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNA LMGKTTGSLP VST+ST +MSGKGL
Sbjct: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKTTGSLPAVSTTSTTVMSGKGL 300
Query: 301 LGKSSKPAVGDDSLAFHGVYSGSGSVAEADLYDPDQPLWNKNCPEKPNALSVMHSSKIGE 360
LGK+SKP VGDDSL FHGVYSGSGS EADLYDPDQPLWN NCPEKPNALS MHSSKI +
Sbjct: 301 LGKNSKPGVGDDSLPFHGVYSGSGSATEADLYDPDQPLWNNNCPEKPNALSGMHSSKIDD 360
Query: 361 VESVIGDDPSDRNQVRKCDGANNGCTGRTTATSGSQVTSSSVWGRVGSRNRQDVIGKLDP 420
VES++GDDPSDRNQVRKCD A+NGC+ R TATSGSQ TSSSVWGRVGSRNRQDV GKLDP
Sbjct: 361 VESLMGDDPSDRNQVRKCDAADNGCSSRITATSGSQGTSSSVWGRVGSRNRQDVKGKLDP 420
Query: 421 AVSSSGYHENEAKEHNEVLTRAQENSHKQKHMAQDDAHTKAGDLSLNTQSD--AMRTMRK 480
V+SSG +NE KEHNEVLT Q NSH+QKHMAQ DAHT+AG+L +D AMRTMRK
Sbjct: 421 -VNSSGCLDNEVKEHNEVLTSVQGNSHQQKHMAQGDAHTEAGNLPHKALNDANAMRTMRK 480
Query: 481 PSQKAMRTLFVNGIPQQSNRAELILSHFKKYGEVIDIYIPANSQHAFVQFSKREEAEAAL 540
PSQKA+RTLFVNGIP QSN+ E +LSHFKKYGEVIDIYIPANSQ AFVQFSKREEAEAAL
Sbjct: 481 PSQKALRTLFVNGIPLQSNKTETLLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAAL 540
Query: 541 KSPDAVMGNRFIKLWWANRDNIPDDGVSINNGIHVHPRHIAAASLPSLVVKGKNSVQVST 600
KSPDAVMGNRFIKLWWANRD+IPD GV NNGIHV PRHIAA SL LVVKGKNSVQVST
Sbjct: 541 KSPDAVMGNRFIKLWWANRDSIPDAGVGSNNGIHVPPRHIAAVSLLPLVVKGKNSVQVST 600
Query: 601 SKGSISHPLEFSPVTADRSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLAMKRNDFR 660
SKGS+SHPLE S D SHAFSSPKVSSPLQKKLENLEQLKEELRKKQEML MKRNDFR
Sbjct: 601 SKGSVSHPLESSLAAPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLDMKRNDFR 660
Query: 661 RQLDKLEKQ-TGNKAEAIAGFSAKRLKVGIEAGISKLVTPKASNSSIALASSHIEVNEEH 720
RQLDKLEKQ TGNK E + GFSAKRLKVGIEA SKLVTPKAS+S IALAS H E + EH
Sbjct: 661 RQLDKLEKQATGNKGETVVGFSAKRLKVGIEADASKLVTPKASDSGIALASPHTEASGEH 720
Query: 721 VECPCPEPTTSTVQQESSKFEPVHSLAPKAPFDIDRKKLDSSSTGFRILPPLPAEFTNED 780
VECPCPEPTTS VQQESSKFEPVH L+ + PFD+D K S STGFR++PPLP +F NED
Sbjct: 721 VECPCPEPTTSIVQQESSKFEPVHPLSSETPFDVDGDKSGSCSTGFRVVPPLPVDFANED 780
Query: 781 VIKEHFSSLGDVCGVGLVSEDGDRASNASDICSANVTFLTRHSAERAFVDGKCWQGQPLK 840
VIK+HFSSLGDVC V LVSEDGDR SNAS+ CSANVTFLTRHSAERAF DGK WQGQ LK
Sbjct: 781 VIKKHFSSLGDVCTVELVSEDGDRISNASNNCSANVTFLTRHSAERAFKDGKSWQGQDLK 840
Query: 841 LVWL--FSGKDPNGA-SSEASRDVDMEPESKSESILSKE 867
L+WL G+D +GA S +ASRD DMEPES+ ESIL KE
Sbjct: 841 LIWLSGSEGEDHDGALSDDASRDADMEPESEPESILLKE 878
BLAST of Sed0015855 vs. NCBI nr
Match:
XP_022983332.1 (zinc finger CCCH domain-containing protein 41-like [Cucurbita maxima])
HSP 1 Score: 1380.2 bits (3571), Expect = 0.0e+00
Identity = 719/879 (81.80%), Postives = 763/879 (86.80%), Query Frame = 0
Query: 1 MELKVSYPNPDISSSDYVSDPEEKDISDDEDDDRNHKHRRREMQSQSSERDTREHVLRPY 60
MELKVSYP ISSS+YVSDPEEKDISDDEDDDRNHKHRRRE +SQS ERDTREHVLRPY
Sbjct: 1 MELKVSYPKLGISSSEYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVLRPY 60
Query: 61 GKRSKPFENGRSFRDNDSHGNEAWKSFNPPTFEKDVPGRFDKRRLGAVPGPRVAGDFNQR 120
GKRSKP ENGRS RDNDS NEAWKSFN PT EKD+PG+FDKRRLG+VPG R+AGDFNQR
Sbjct: 61 GKRSKPSENGRSIRDNDSQANEAWKSFNTPTLEKDIPGKFDKRRLGSVPGARLAGDFNQR 120
Query: 121 IRANHAFSGDLSFGRGRGRESGTWKQF-------DIASQIVQHGSFPPSLFAGRGLPSVS 180
IRAN FSGDLS GRGRGRESGTW QF DIASQIV G FPPSLFAGR LPSVS
Sbjct: 121 IRANQTFSGDLSSGRGRGRESGTWNQFDSRFSPVDIASQIVHRGPFPPSLFAGRSLPSVS 180
Query: 181 TAQTAPWNAYGLIPGIPNSGLETMHSLGLQGTLRPPNNPPLNIGMPRQRCRDFEERGFCL 240
TAQTAPWNA+GLIPGIPNSGLETMH +GLQGTLRPP NPPLNIG+PRQRCRDFEERGFCL
Sbjct: 181 TAQTAPWNAFGLIPGIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL 240
Query: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTILMSGKGL 300
RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNA LMGKTTGSLP VST+ TI+MSGKGL
Sbjct: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKTTGSLPAVSTTPTIVMSGKGL 300
Query: 301 LGKSSKPAVGDDSLAFHGVYSGSGSVAEADLYDPDQPLWNKNCPEKPNALSVMHSSKIGE 360
LGK+SKP VGDDSL FHGVYSGSGS EADLYDPDQPLWN NCPEKPNALS MHSSK +
Sbjct: 301 LGKNSKPGVGDDSLPFHGVYSGSGSATEADLYDPDQPLWNNNCPEKPNALSGMHSSKTDD 360
Query: 361 VESVIGDDPSDRNQVRKCDGANNGCTGRTTATSGSQVTSSSVWGRVGSRNRQDVIGKLDP 420
VES++GDDPSDRNQVRKCD A+NGC+ R TATSGSQVTSSSVWGRVGSRNRQDV GKLDP
Sbjct: 361 VESLMGDDPSDRNQVRKCDAADNGCSSRITATSGSQVTSSSVWGRVGSRNRQDVKGKLDP 420
Query: 421 AVSSSGYHENEAKEHNEVLTRAQENSHKQKHMAQDDAHTKAGDLSLNTQSD--AMRTMRK 480
V+SSG +NE KEHNEVLT Q NSH QKHMAQ DAHT+AG+LS +D AMRTMRK
Sbjct: 421 -VNSSGCLDNEVKEHNEVLTSVQGNSHHQKHMAQGDAHTEAGNLSHKALNDANAMRTMRK 480
Query: 481 PSQKAMRTLFVNGIPQQSNRAELILSHFKKYGEVIDIYIPANSQHAFVQFSKREEAEAAL 540
PSQKA+RTLFVNGIP QSN+ E +LSHFKKYGEVIDIYIPANSQ AFVQFSKREEAEAAL
Sbjct: 481 PSQKALRTLFVNGIPPQSNKTETLLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAAL 540
Query: 541 KSPDAVMGNRFIKLWWANRDNIPDDGVSINNGIHVHPRHIAAASLPSLVVKGKNSVQVST 600
KSPDAVMGNRFIKLWWANRDNIPD GV NNGIHV PRHIAA SL LVVKGKNSVQVST
Sbjct: 541 KSPDAVMGNRFIKLWWANRDNIPDAGVGSNNGIHVPPRHIAAVSLLPLVVKGKNSVQVST 600
Query: 601 SKGSISHPLEFSPVTADRSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLAMKRNDFR 660
SKGS+SHPLE S D SHAFSSPKVSSPLQKKLENLEQLKEELRKKQEML MKRNDFR
Sbjct: 601 SKGSVSHPLESSLAAPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLDMKRNDFR 660
Query: 661 RQLDKLEKQ-TGNKAEAIAGFSAKRLKVGIEAGISKLVTPKASNSSIALASSHIEVNEEH 720
RQLDKLEKQ TGNK E + GFSAKRLKVGIEA SKLVTPKAS+S IALAS H E + EH
Sbjct: 661 RQLDKLEKQTTGNKGETVVGFSAKRLKVGIEADASKLVTPKASDSGIALASPHTEASGEH 720
Query: 721 VECPCPEPTTSTVQQESSKFEPVHSLAPKAPFDIDRKKLDSSSTGFRILPPLPAEFTNED 780
VECPCPEPTTS VQQESSKFEP+H L+ +APFD+D +K S STGFR++PPLP +F NED
Sbjct: 721 VECPCPEPTTSIVQQESSKFEPIHPLSSEAPFDVDGEKSGSCSTGFRVVPPLPVDFANED 780
Query: 781 VIKEHFSSLGDVCGVGLVSEDGDRASNASDICSANVTFLTRHSAERAFVDGKCWQGQPLK 840
VIK+HFSSLGDVC V LVSEDGDR SNAS+ SANVTFLTRHSAERAF DGK WQGQ LK
Sbjct: 781 VIKKHFSSLGDVCTVELVSEDGDRISNASNNFSANVTFLTRHSAERAFKDGKSWQGQDLK 840
Query: 841 LVWL--FSGKDPNG-ASSEASRDVDMEPESKSESILSKE 867
L+WL G+D +G S +ASRD DMEPES+ ESIL KE
Sbjct: 841 LIWLSGSEGEDHDGPLSDDASRDADMEPESEPESILLKE 878
BLAST of Sed0015855 vs. NCBI nr
Match:
XP_022934880.1 (zinc finger CCCH domain-containing protein 41-like [Cucurbita moschata])
HSP 1 Score: 1375.9 bits (3560), Expect = 0.0e+00
Identity = 717/879 (81.57%), Postives = 761/879 (86.58%), Query Frame = 0
Query: 1 MELKVSYPNPDISSSDYVSDPEEKDISDDEDDDRNHKHRRREMQSQSSERDTREHVLRPY 60
MELKVSYP ISSS+YVSDPEEKDISDDEDDDRNHKHRRRE +SQS ERDTREHVLRPY
Sbjct: 1 MELKVSYPKLGISSSEYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVLRPY 60
Query: 61 GKRSKPFENGRSFRDNDSHGNEAWKSFNPPTFEKDVPGRFDKRRLGAVPGPRVAGDFNQR 120
GKRSKP ENGRS RDNDS NEAWKSFN PT EKD+PG+FDKRRLGAVPG R+AGDFNQR
Sbjct: 61 GKRSKPSENGRSIRDNDSQANEAWKSFNTPTLEKDIPGKFDKRRLGAVPGARLAGDFNQR 120
Query: 121 IRANHAFSGDLSFGRGRGRESGTWKQF-------DIASQIVQHGSFPPSLFAGRGLPSVS 180
IRAN FSGDLS GRGRGRESGTW QF DIASQIV G FPPSLFAGRGLPSVS
Sbjct: 121 IRANQTFSGDLSSGRGRGRESGTWNQFDSRFSPVDIASQIVHRGPFPPSLFAGRGLPSVS 180
Query: 181 TAQTAPWNAYGLIPGIPNSGLETMHSLGLQGTLRPPNNPPLNIGMPRQRCRDFEERGFCL 240
TAQTAPWNA+GL+PGIPN GLETMH +GLQGTLRPP NPPLNIG+PRQRCRDFEERGFCL
Sbjct: 181 TAQTAPWNAFGLLPGIPNGGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL 240
Query: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTILMSGKGL 300
RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNA LMGKTTGSLP VST+ST +MSGKGL
Sbjct: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKTTGSLPAVSTTSTTVMSGKGL 300
Query: 301 LGKSSKPAVGDDSLAFHGVYSGSGSVAEADLYDPDQPLWNKNCPEKPNALSVMHSSKIGE 360
LGK+SKP VGDDSL FHGVYSGSGS EADLYDPDQPLWN NCPEKPNALS MHSSKI +
Sbjct: 301 LGKNSKPGVGDDSLPFHGVYSGSGSATEADLYDPDQPLWNNNCPEKPNALSGMHSSKIDD 360
Query: 361 VESVIGDDPSDRNQVRKCDGANNGCTGRTTATSGSQVTSSSVWGRVGSRNRQDVIGKLDP 420
VES++GDDPSDRNQVRKCD A+NGC+ R ATSGSQVTSSSVWGRVGSRNRQDV GKLDP
Sbjct: 361 VESLMGDDPSDRNQVRKCDAADNGCSSRIAATSGSQVTSSSVWGRVGSRNRQDVKGKLDP 420
Query: 421 AVSSSGYHENEAKEHNEVLTRAQENSHKQKHMAQDDAHTKAGDLSLNTQSD--AMRTMRK 480
V+SSG +NE KEHNEVLT Q NSH QKHMAQ DAHT+AG+L +D AMRTMRK
Sbjct: 421 -VNSSGCLDNEVKEHNEVLTSVQGNSHPQKHMAQGDAHTEAGNLPHKALNDANAMRTMRK 480
Query: 481 PSQKAMRTLFVNGIPQQSNRAELILSHFKKYGEVIDIYIPANSQHAFVQFSKREEAEAAL 540
PSQKA+RTLFVNGIP QSN+ E +LSHFKKYGEVIDIYIPANSQ AFVQFSKREEAEAAL
Sbjct: 481 PSQKALRTLFVNGIPLQSNKRETLLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAAL 540
Query: 541 KSPDAVMGNRFIKLWWANRDNIPDDGVSINNGIHVHPRHIAAASLPSLVVKGKNSVQVST 600
KSPDAVMGNRFIKLWWANRD+IPD GV NNGIHV PRHIAA SL LVVKGKNSVQVST
Sbjct: 541 KSPDAVMGNRFIKLWWANRDSIPDAGVGSNNGIHVPPRHIAAVSLLPLVVKGKNSVQVST 600
Query: 601 SKGSISHPLEFSPVTADRSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLAMKRNDFR 660
SKGS+SHPLE S D SHAFSSPKVSSPLQKKLENLEQLKEELRKKQEML MKRNDFR
Sbjct: 601 SKGSVSHPLESSLAAPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLDMKRNDFR 660
Query: 661 RQLDKLEKQ-TGNKAEAIAGFSAKRLKVGIEAGISKLVTPKASNSSIALASSHIEVNEEH 720
RQLDKLEKQ TGNK E + G SAKRLKVGIEA SKLVTPKAS+S IALAS H E + EH
Sbjct: 661 RQLDKLEKQATGNKGETVVGLSAKRLKVGIEADASKLVTPKASDSGIALASPHTEASGEH 720
Query: 721 VECPCPEPTTSTVQQESSKFEPVHSLAPKAPFDIDRKKLDSSSTGFRILPPLPAEFTNED 780
VECPCPEPTTS VQQESSKFEPVH L+ + PFD+D +K S STGFR++PPLP +F NED
Sbjct: 721 VECPCPEPTTSIVQQESSKFEPVHPLSSETPFDVDGEKSGSCSTGFRVVPPLPVDFANED 780
Query: 781 VIKEHFSSLGDVCGVGLVSEDGDRASNASDICSANVTFLTRHSAERAFVDGKCWQGQPLK 840
IK+HFSSLGDVC V LVSEDGDR SNAS+ SANVTFLTRHSAERAF DGK WQGQ LK
Sbjct: 781 AIKKHFSSLGDVCAVELVSEDGDRISNASNNFSANVTFLTRHSAERAFKDGKSWQGQDLK 840
Query: 841 LVWLFS--GKDPNGA-SSEASRDVDMEPESKSESILSKE 867
L+WL S G+D +GA S +ASRD DMEPES+ ESIL KE
Sbjct: 841 LIWLSSSEGEDHDGALSDDASRDADMEPESEPESILLKE 878
BLAST of Sed0015855 vs. ExPASy Swiss-Prot
Match:
Q9LVX1 (Zinc finger CCCH domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=At3g27700 PE=1 SV=1)
HSP 1 Score: 556.2 bits (1432), Expect = 6.5e-157
Identity = 378/912 (41.45%), Postives = 526/912 (57.68%), Query Frame = 0
Query: 1 MELKVSYPNPDI-SSSDYVSDPEEK-DISDDEDDDRNHKHRRR-EMQSQSSERDTREHVL 60
MEL VS P + S D +SDPEE+ +IS++EDDDRNHKHRR+ E +SQS E+D+ +
Sbjct: 1 MELSVSSPKQSVLSPPDCMSDPEEEHEISEEEDDDRNHKHRRKEETRSQSLEQDSSDQAF 60
Query: 61 -RPYGKRSKPFENGRSFRDNDSHGNEAWKSFNPPTFEKDVPGRFDKRRLGAVPGPRVAGD 120
RPY K + +ENG SF ++ +KR G G RV D
Sbjct: 61 SRPYRKNYRHYENGNSFSEH------------------------EKRSFGTGSGQRVQFD 120
Query: 121 FNQRIRANHAFSGDLSFGRGRGRESGTWKQ-------FDIASQIVQHGSFPPSLFAGRGL 180
NQR+R+N FS D GRGRG G+W Q D++S +VQ GS +F GRGL
Sbjct: 121 -NQRMRSNPMFSRDSGPGRGRG-NYGSWAQRDSRFNPVDLSSHMVQVGSMGQGMFGGRGL 180
Query: 181 PSVSTAQTAPWNAYGLIPGIPNSGLETMHSLGLQGTLRPPNNPPLNIGMPRQRCRDFEER 240
VS AQ+APW +G+IPG+PN GL+ H LQG+LRPP N PLN+G+PRQRCRDFEER
Sbjct: 181 AGVSAAQSAPWPPFGMIPGVPNGGLDGFHH--LQGSLRPPLNAPLNMGIPRQRCRDFEER 240
Query: 241 GFCLRGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTILMS 300
GFCLRGDMCPMEHG+NRIVV+DVQSLSQFNLP+S+P A + ++ +P M+
Sbjct: 241 GFCLRGDMCPMEHGMNRIVVDDVQSLSQFNLPVSVPGAPHLAASSKQVP-AQFGGASFMN 300
Query: 301 GKGLLGKSSKPAVGDDSLAFHGVYSGSGSVAEADLYDPDQPLWNKNCPEKPNALSVMHSS 360
KG G++++ + D L + Y +G D YDPDQPLWN + E A+S ++S
Sbjct: 301 PKGAHGRTNEGGMAVDGLGYGDAYPSAGG---TDFYDPDQPLWNNSTGETSGAISTLNSH 360
Query: 361 KIGEVESVIGDDPSDRNQVRKCDGANNGCTGRTTATSGSQVTSSSVWGRV-GSRNRQDVI 420
+ E + + D NQ D A NGC R S+ TS SVWGR+ GS ++ +
Sbjct: 361 GVDENVAPL----DDSNQ----DAAENGCGIR-----DSRSTSQSVWGRMKGSNSQANSK 420
Query: 421 GKLDPAVSSSGYHENEAKEHNEVLTRAQENSHKQKHMAQDDAHTKAGDLSLNTQSDAMRT 480
K D ++SS E++ KE ++ KQ H+ + A K D S N +D M
Sbjct: 421 EKADAVLNSSAVPEDQLKE----VSVNSSRHGKQNHVGESVA--KVVD-SSNISNDMMNN 480
Query: 481 MRKPSQKAMRTLFVNGIPQQSNRAELILSHFKKYGEVIDIYIPANSQHAFVQFSKREEAE 540
RKP+QKAMRTLFVN +P +SNR +LIL+HF+K+G+VIDI+IP NS+ AFVQFSKREEAE
Sbjct: 481 TRKPTQKAMRTLFVNYVPHESNRRDLILAHFQKFGKVIDIHIPVNSERAFVQFSKREEAE 540
Query: 541 AALKSPDAVMGNRFIKLWWANRDNIPDDGVSINNGIHVHPRHIAAASLPS---LVVKGKN 600
+AL++PDAVMGNRFIKLWWANRD+IPD+G+S +G + R + A+ + + K+
Sbjct: 541 SALRAPDAVMGNRFIKLWWANRDSIPDNGLSTGSGASMKGRSMTASGAQNQFPIAAASKS 600
Query: 601 SVQVSTSK-------GSISHPLEFSPVTADRSHAFSSPKVSSPLQKKLENLEQLKEELRK 660
+ S +K G+ S + PV S PKV+ QKK + LE+LKE LRK
Sbjct: 601 NHVSSIAKVPTFQTGGAPSSSEQPKPVVV----TTSGPKVTPLQQKKADTLERLKETLRK 660
Query: 661 KQEMLAMKRNDFRRQLDKLEKQ-TGNKAEAIAGFSAKRLKVGIEAGI-SKLVTPKASNSS 720
KQEML KRN++R++L LEKQ T K E AKR+K+ + + + +PK +S+
Sbjct: 661 KQEMLEQKRNEYRKKLATLEKQGTVVKREEADEPDAKRVKLDTASDSGAAIASPKTESST 720
Query: 721 IALASSHIEVNEEHVECPCPEPTTSTVQQESSKFEPVHSLAPKAPFDIDRKKLDSSSTGF 780
++ + P P + +Q F + + AP ++R KLD+ +T
Sbjct: 721 DKKVPILKPLSTAKLSTETPSPDSKNFKQRPYSF----TTSLNAPM-VNRYKLDNRTTTI 780
Query: 781 RILPPLPAEFTNEDVIKEHFSSLGDVCGVGLVS----EDGDRASNASDICSANVTFLTRH 840
+++PPLP + V+KEHFSS G+V V L + G ++ +A VTF+ R
Sbjct: 781 KVVPPLPTGLADVAVVKEHFSSYGEVSKVELEDNASIDSGKDHETQNESRAACVTFVKRS 840
Query: 841 SAERAFVDGKCWQGQPLKLVWL-------FSGKDPNGASSEASRDVDMEPESKSESILSK 878
+AE+AF + KCWQ L+LVW+ + + N S SRD ++ ++K S+ +
Sbjct: 841 AAEKAFANAKCWQEHTLQLVWVTRQSNRESNNNNNNSNSLSVSRD-NLSSKNKCASVSND 850
BLAST of Sed0015855 vs. ExPASy Swiss-Prot
Match:
Q0JDM0 (Zinc finger CCCH domain-containing protein 27 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0394300 PE=2 SV=2)
HSP 1 Score: 491.5 bits (1264), Expect = 2.0e-137
Identity = 364/912 (39.91%), Postives = 493/912 (54.06%), Query Frame = 0
Query: 4 KVSYPNP----DISSSDYVSDPEEKDISDDEDDDRNHKHRRREMQSQSSERDTREHVLRP 63
K+ P+P + S+S+ +D E+ +ISDD+DDDRNHKHR+RE + QS + +T + P
Sbjct: 14 KIEVPSPKDENNSSNSEAATDNEDFEISDDDDDDRNHKHRKREARPQSFDENTEQSPGGP 73
Query: 64 YGKRSKPFENGRSFRDNDSHGNEAWKSFNPPTFEKDVPGRFDKRRLGA---VPGPRVAGD 123
KR K G DSHG EA K F P +F KRR GA PRV
Sbjct: 74 LKKRHK-ISGGA-----DSHG-EAQKDFFP---------KF-KRRPGAGAHSRAPRVNPS 133
Query: 124 FNQRIRANHAFSGDLSFGRGRGRESGTWKQ----------FDIASQIVQHG-SFPPSLFA 183
F ++ + + RGRGR W Q D ASQ+ G PSLF
Sbjct: 134 FRD---SSASVAARAPMTRGRGRNGAPWAQHEPRFNTLEMIDFASQMASQGPPTHPSLFM 193
Query: 184 GRGLPSVSTAQTAPWNAYGLIPGIPNSGLETMHSLGLQGTLRPPNNPPLNIGMPRQRCRD 243
G LPS +AQ W YG +PG+PN L+ +H LG+QG ++P +P +++GMPRQRCRD
Sbjct: 194 GPALPSGGSAQNGSWGPYGFMPGMPNGMLDPIHPLGMQGPIQPAISPLIDLGMPRQRCRD 253
Query: 244 FEERGFCLRGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAQLMG--KTTGSLPTVSTS 303
FEERGFCLRGDMCPMEHG+NRIVVED+QSLSQFNLP+++PN Q +G G+ P V+TS
Sbjct: 254 FEERGFCLRGDMCPMEHGLNRIVVEDMQSLSQFNLPVTVPNTQGLGIQNEPGTAP-VNTS 313
Query: 304 STILMSGKGLLGKSSKPAVGDDSLAFHGVYSGSGSVAEADLYDPDQPLWNKNCPEKPNAL 363
S L KG+ K K AV +D L +G + + +V++AD+YDPDQPLWN P+ +
Sbjct: 314 S--LGGSKGVPAKDIKSAVTNDVLKLNG--TTALAVSDADVYDPDQPLWNNEHPDA--SA 373
Query: 364 SVMHSSKIGEVESVIGDDPSDR-NQVRKCDGANNGCTGRTTATSGSQVTSSSVWGRVGSR 423
H+ + ES+ + ++ NQV D + N + SSVWGR+ S+
Sbjct: 374 GFAHTDGVWNAESLGYEAAREQGNQVLAADSSQN--------------SKSSVWGRIASK 433
Query: 424 NRQDVIGKLDPAVSSSGYHENEAKEHNEVLTRAQENSHKQKHMAQDDAHTKAGDLSLNTQ 483
GK A S+S + ++E+ A H A+D G +
Sbjct: 434 KLGH--GKTANATSTSATGNKRNESYDEM---APSTVHVNPASAKD----SNGQSNSRIF 493
Query: 484 SDAMRTMRKPSQKAMRTLFVNGIPQQSNRAELILSHFKKYGEVIDIYIPANSQHAFVQFS 543
D R + S KA RTL+VNGIP +SNR E +LSHF+K+G+VIDIYIP+NS+ AFVQFS
Sbjct: 494 GDVGRQSNRASHKASRTLYVNGIPLESNRWEALLSHFQKFGQVIDIYIPSNSEKAFVQFS 553
Query: 544 KREEAEAALKSPDAVMGNRFIKLWWANRDNIPDDGVSINNGIHVHPRHIAAA-----SLP 603
KREEAEAALK+PDAVMGNRFIKLWWANRD IPD+ + I H++AA P
Sbjct: 554 KREEAEAALKAPDAVMGNRFIKLWWANRDRIPDE---VEGRIPAKSSHMSAALANSVPQP 613
Query: 604 SLVVKGKNSVQVSTSKGSISHPLEFS-PVTADRSHAFSSPKVSSPLQKKLENLEQLKEEL 663
S +GK ++Q +T + S E S P T + +S K P K+ E+LE L EEL
Sbjct: 614 SSSNRGKENLQSATPRASSGSSAEASGPGTGHKMLPANSVKSLPPDTKRQESLE-LLEEL 673
Query: 664 RKKQEMLAMKRNDFRRQLDKLEKQTG---NKAEAIAG------------FSAKRLKVGIE 723
RKKQE+LA KR++FRRQL+KL KQ G + +A AG +K + G E
Sbjct: 674 RKKQEILAQKRDEFRRQLEKLAKQKGLANSAKQAEAGGKEVASNDVHRVTDSKSMNTGTE 733
Query: 724 AGISKLVTPKASNSSIALASSHIEVNEEHVECPCPEPTTSTVQQESSKFEPVHSLAPKAP 783
T + S +SSH + +P +T Q +P
Sbjct: 734 GPRDAAGTLQNRTSGELASSSH-----KSSATSAQKPAVATKQ-----------TSPLLV 793
Query: 784 FDIDRKKLDSSSTGFRILPPLPAEFTNEDVIKEHFSSLGDVCGVGLVSEDG---DRASNA 843
+R KLD+ +T FRILPPLP E +E V+K+HF S G++ V L + D
Sbjct: 794 PSQNRFKLDNRTTSFRILPPLPPEIADESVLKDHFMSFGELSSVVLEDTEAYNHDATLKP 853
Query: 844 SDICSANVTFLTRHSAERAFVDGKCWQGQPLKLVWLFSGKDPNGASSEASRDVDMEPESK 871
S CSA VT+ TR SAE+AF+ GK +G L+ +WL + P + + + +
Sbjct: 854 SLSCSACVTYTTRQSAEKAFIGGKSCKGHTLRFMWLTA--SPGSTNHSRFQKTSIPARAS 853
BLAST of Sed0015855 vs. ExPASy Swiss-Prot
Match:
Q9VIV2 (Zinc finger protein swm OS=Drosophila melanogaster OX=7227 GN=swm PE=1 SV=1)
HSP 1 Score: 63.9 bits (154), Expect = 1.0e-08
Identity = 127/556 (22.84%), Postives = 209/556 (37.59%), Query Frame = 0
Query: 27 SDDEDDDRNHKHRRREMQSQSSERDTREHVLRPYGKRSKPFENGRSF---RDNDSHGNE- 86
+D E+ R+ + RR ++S+S RS+ N R+F R D NE
Sbjct: 225 ADKENQPRDSRRRRASLRSRS---------------RSRSRSNERAFRRSRSRDRRVNER 284
Query: 87 -----AWKSFNPPTFEKD--VPGR--FDKRRLGAVPGPRVAGDFNQRIRANHAFSGDLSF 146
+++ +PP + D GR FD+RR+G G+ + R R F
Sbjct: 285 EKTQRQFRNKSPPGSQTDNRHHGRRNFDRRRIG--------GNADDRPR----------F 344
Query: 147 GRGRGRESGTWKQFDIASQIVQHGSFPPSLFAGRGLPSVSTAQTAPWNAYGLIPGIPNSG 206
G + R S S P A R S QTA N LIP
Sbjct: 345 GNNKSRRS-------------HSRSMSPERNARRNQNSPDRVQTAQAN---LIP------ 404
Query: 207 LETMHSLGLQGTLRPPNNPPLNIGMPRQRCRDFEERGFCLRGDMCPMEHGINRIVVEDVQ 266
+ PP PRQRCRDF+E+G+C+RG+ CP +HG+N +V E +
Sbjct: 405 ----------APVAPPAPVEHPASHPRQRCRDFDEKGYCVRGETCPWDHGVNPVVFEGIN 464
Query: 267 SLS-QFNLPLSLPNAQLMGKTTGSLPTVSTSSTILMSGKGLLGKSSKPAVGDDSL-AFHG 326
+ S ++ P+A + +G P +G+G + ++P G ++ F G
Sbjct: 465 NTSLMMSMREYNPDAPEIWARSGGPPP--------GAGQGPVPPPTQP--GQTTINPFSG 524
Query: 327 ------VYSGSGSVAEADLYDPDQPLWNKNCPEKPNALSVMHSSKIGEVESVIGDDPSDR 386
+ SGSG + + P+ + +N P A + V + P R
Sbjct: 525 NVRPTTLMSGSG---PSPMGVPNPADYARNPGAPPQAAMMPFPFNPTAVTT-----PLQR 584
Query: 387 N--QVRKCDGANNGCTGRTTATSGSQVTSSSVWGRVGSRNRQDVIGKLDPAVSSSGYHEN 446
+ DGA G ++ + V ++ + + +L P V
Sbjct: 585 QLIPIPVVDGAPTGGVAE-VGKRRFELEDTVAIADVPTKRKVPINSRLGPRV-------- 642
Query: 447 EAKEHNEVLTRAQENSHKQKHMAQDDAHTKAGDLSLNTQSDAMRTMRKPSQKAMRTLFVN 506
N + Q+H + +L +
Sbjct: 645 --------------NPNMQQHNS--------------------------------SLELR 642
Query: 507 GIPQQSNRAELILSHFKKYGEVIDIYI--PANSQHAFVQFSKREEAEAALKSPDAVMGNR 558
+P+ N + +HF K+G++++I + + + A V FS EA A +S +AV+ NR
Sbjct: 705 KVPRGLNTIAHLNNHFAKFGKIVNIQVSYEGDPEAAIVTFSTHAEANVAYRSTEAVLNNR 642
BLAST of Sed0015855 vs. ExPASy Swiss-Prot
Match:
Q2T9I5 (RNA-binding protein 26 OS=Xenopus laevis OX=8355 GN=rbm26 PE=2 SV=2)
HSP 1 Score: 58.9 bits (141), Expect = 3.3e-07
Identity = 141/615 (22.93%), Postives = 227/615 (36.91%), Query Frame = 0
Query: 8 PNPDISSSDYVS----DPEEKDISDDE---DDDRNHKHRRREMQ----SQSSERDTREHV 67
P PD +S+ V + +EK+I DE ++++ K RR Q S + +DTRE+
Sbjct: 79 PQPDSTSTAVVKLDSFEHQEKEIKKDEVNKEEEKEKKAPRRLNQSPQPSSTRHKDTRENR 138
Query: 68 LRPYGKR-----SKPFENGRSFRDNDSHGNEAWKSFNPPTFEKDVPGRFDKRRLGAVP-- 127
R R F +G + D + N K+ R D++R
Sbjct: 139 KRSNSDRESNSIQNSFRSGLPEQKQDVDAAPPRLNSNKVQNAKNTRSRDDRKRDDRFRKR 198
Query: 128 --GPRVAGDFNQRIRANHAFSGDLSFGRGRGRESGTWKQFD-----IASQIVQHGSFPPS 187
V + R R N S+ R R R +Q D ++ S P
Sbjct: 199 EYDRNVPRRDSYRDRYNRRRGRSRSYSRSRSRSWSKERQRDRDRSRSRTRSRDKDSGKPK 258
Query: 188 LFAGRGLP---SVSTAQTAPWNAYGLIPGIPNSGLETMHSLGLQGTLRPPNNPPLN---- 247
R P S ++ + P P S T+ + G N P +
Sbjct: 259 FDLDRPDPVDNSYASGSSVPHIGSAHFPVPTLSSTITVITPSHHGNSSAENWPEFHEDQV 318
Query: 248 -------IGMPRQRCRDFEERGFCLRGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAQ 307
+ M ++RCRD++E+GFC+RGDMCP +HG + +VVEDV LP P
Sbjct: 319 DHSSYGRLQMQKKRCRDYDEKGFCMRGDMCPFDHGSDPVVVEDVNLPG--ILPFPAPPPV 378
Query: 308 LMGKTTGSL---PTVSTSSTILMS-----GKGLLGKSSKPAVGD------------DSLA 367
L G L P++ T + + G L S P G D+
Sbjct: 379 LEGPPPPGLPPPPSLLTPPPVNLQPPPVPPPGPLPPSLPPVTGPPPPLPPLQPAGMDAPP 438
Query: 368 FHGVYSGSGSVAEADLYDPDQPLWNKNCPEKPNALSVMHSSKIGEVESVIGDDPSDRNQV 427
S V L+ P P P++L ++ G + +
Sbjct: 439 NSATSSVPTVVTTGILHPP---------PVPPSSLFPSAAAAAGPIPLF--------PET 498
Query: 428 RKCDGANNGCTGRTTATSGSQVTSSSVWGRVGSRNRQDVIGKLDPAVSSSGYHENEAKEH 487
+ DG N TT TS ++ R ++IG ++S +E
Sbjct: 499 YEADGYNPEAPSMTT-------TSRPLYRHRVHAQRPNLIG-----LTSGDMDLPTPREK 558
Query: 488 NEVLTRAQENSHKQKHMAQDDAHTKAGDLSLNT------QSDAMRTMRKPSQKAMRTLFV 547
N + S K+ + +GD L + +S+ M QK + LF
Sbjct: 559 NNMRIVVDSESRKR--------NLGSGDCVLPSKKPWFDKSNFNNRMNPGFQK--KPLFP 618
BLAST of Sed0015855 vs. ExPASy Swiss-Prot
Match:
Q6NZN0 (RNA-binding protein 26 OS=Mus musculus OX=10090 GN=Rbm26 PE=1 SV=2)
HSP 1 Score: 55.5 bits (132), Expect = 3.6e-06
Identity = 174/750 (23.20%), Postives = 278/750 (37.07%), Query Frame = 0
Query: 22 EEKDISDDE---DDDRNHKHRRR----EMQSQSSERDTREHVLRPYGKRSKPFENGRSFR 81
+EKDI +E +++R K RR QS S RD R R RS+ R
Sbjct: 101 QEKDIKKEELTKEEEREKKFSRRLNHSPPQSSSRYRDNRSRDERKKDDRSRK-------R 160
Query: 82 DNDSHGNEAWKSFNPPTFEKDVPGRFDKR--RLGAVPGPRVAGDFNQRIR-ANHAFSGDL 141
D D NPP R+++R R + R +R+R + S
Sbjct: 161 DYDR---------NPPR-RDSYRDRYNRRRGRSRSYSRSRSRSWSKERLRDRDRDRSRTR 220
Query: 142 SFGRGRGRESGTWK-QFDIASQIVQHGSFPPSLFAGRGLPSVSTAQTAPWNAYGLIPGI- 201
S R R RE K ++D+ ++ P + SVS + + L I
Sbjct: 221 SRSRTRSRERDLVKPKYDLDRTDPLENNYTP-------VSSVSNISSGHYPVPTLSSTIT 280
Query: 202 ----PNSGLETMHSLGLQGTLRPPNNPPLNIGMPRQRCRDFEERGFCLRGDMCPMEHGIN 261
+ G T S + +N + MP++RCRD++E+GFC+RGDMCP +HG +
Sbjct: 281 VIAPTHHGNNTTESWSEFHEDQVDHNSYVRPPMPKKRCRDYDEKGFCMRGDMCPFDHGSD 340
Query: 262 RIVVEDVQSLSQFNLP--------------------LSLPNAQLM------GKTTGSLPT 321
+VVEDV P L+ P L G SLP
Sbjct: 341 PVVVEDVNLPGMLPFPAQPPVVEGPPPPGLPPPPPILTPPPVNLRPPVPPPGPLPPSLPP 400
Query: 322 VSTSSTIL-------MSGKGLLGKSSKPAVGDDSLAFHGVYSGSGSVAEA-----DLYDP 381
V+ L M SS P V + H S+ A D YD
Sbjct: 401 VTGPPPPLPPLQPSGMDAPPNSATSSVPTVVTTGI-HHQPPPAPPSLFTAVFVLPDTYDT 460
Query: 382 DQPLWNKNCPEKPNALSVMHSSKI-GEVESVIGDDPSDRNQVRKCDGANNGCTGRTTATS 441
D +N P N M+ ++ + ++IG D + + N
Sbjct: 461 DG--YNPEAPSITNTSRPMYRHRVHAQRPNLIGLTSGDMDLPPREKPPN----------- 520
Query: 442 GSQVTSSSVWGRVGSRNRQDVIGKLDPAVSSSGYHENEAKEHNEVLTRAQENSHKQKHMA 501
SS+ V S +R+ IG +P VS+ ++ + + QK +
Sbjct: 521 -----KSSMRIVVDSESRKRTIGSGEPGVSTKKTWFDKPNFNR------TNSPGFQKKVQ 580
Query: 502 QDDAHTKAGDLSLNTQSDAMRTMRKPSQKAMRTLFVNGIPQQSNRAELILSHFKKYGEVI 561
+ +TK L + +P + N + HF ++G ++
Sbjct: 581 FGNENTK--------------------------LELRKVPPELNNISKLNEHFSRFGTLV 640
Query: 562 DIYIPANS--QHAFVQFSKREEAEAALKSPDAVMGNRFIKLWW----------------- 621
++ + N + A +QF+ EEA+ A+ S +AV+ NRFIK++W
Sbjct: 641 NLQVAYNGDPEGALIQFATYEEAKKAISSTEAVLNNRFIKVYWHREGTTQQLQTTSPKVI 700
Query: 622 ---ANRDNIPDDGVSINNGIHVHP--------RHIAAASLPSLVVK----------GKNS 667
+ +P S+ + P A + LP V K K S
Sbjct: 701 QPLVQQPILPVVKQSVKERLGPVPSATTEPAEAQSATSELPQNVTKLSVKDRLGFVSKPS 760
BLAST of Sed0015855 vs. ExPASy TrEMBL
Match:
A0A6J1DF65 (zinc finger CCCH domain-containing protein 41 OS=Momordica charantia OX=3673 GN=LOC111019938 PE=4 SV=1)
HSP 1 Score: 1397.1 bits (3615), Expect = 0.0e+00
Identity = 720/886 (81.26%), Postives = 771/886 (87.02%), Query Frame = 0
Query: 1 MELKVSYPNPDISSSDYVSDPEEKDISDDEDDDRNHKHRRREMQSQSSERDTREHVLRPY 60
MELKVSYP P ISSSDYVSDPEEKDISDDEDDDRNHKHRRRE +SQS ERDTREHVLRPY
Sbjct: 1 MELKVSYPKPGISSSDYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVLRPY 60
Query: 61 GKRSKPFENGRSFRDNDSHGNEAWKSFNPPTFEKDVPGRFDKRRLGAVPGPRVAGDFNQR 120
GKR+KPFENGRSFR+N+S +EAWKSFN P FEKD+PG+FDKRRLGAVPGPR+ GDFNQR
Sbjct: 61 GKRNKPFENGRSFRENESQASEAWKSFNTPNFEKDIPGKFDKRRLGAVPGPRLTGDFNQR 120
Query: 121 IRANHAFSGDLSFGRGRGRESGTWKQF-------DIASQIVQHGSFPPSLFAGRGLPSVS 180
IRAN FSGDLS GRGRGRE GTW QF DIASQIV HGSFPPSLFAGRGLP+VS
Sbjct: 121 IRANQTFSGDLSAGRGRGREPGTWNQFDSRFSPVDIASQIVHHGSFPPSLFAGRGLPNVS 180
Query: 181 TAQTAPWNAYGLIPGIPNSGLETMHSLGLQGTLRPPNNPPLNIGMPRQRCRDFEERGFCL 240
TAQTAPWNA+GL+PG+PN+GLET+HS+GLQGTLRPP NPPLNIG+PRQRCRDFEERGFCL
Sbjct: 181 TAQTAPWNAFGLLPGMPNNGLETIHSIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL 240
Query: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTILMSGKGL 300
RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNA LMGK TGSLP VSTSST +MSGKGL
Sbjct: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKATGSLPAVSTSSTSVMSGKGL 300
Query: 301 LGKSSKPAVGDDSLAFHGVYSGSGSVAEADLYDPDQPLWNKNCPEKPNALSVMHSSKIGE 360
LGK+SKP VGDDSL F G YSGSG AEADLYDPDQPLWN NCPEK NALS MHSSKI E
Sbjct: 301 LGKNSKPGVGDDSLGF-GAYSGSGCAAEADLYDPDQPLWNNNCPEKSNALSAMHSSKIDE 360
Query: 361 VESVIGDDPSDRNQVRKCDGANNGCTGRTTATSGSQVTSSSVWGRVGSRNRQDVIGKLDP 420
VES++GDDPSDRNQVRKCD A+NGCT RTTA SGSQVTSSS+WGRVGSRNRQD GK+DP
Sbjct: 361 VESLMGDDPSDRNQVRKCDAADNGCTSRTTAASGSQVTSSSIWGRVGSRNRQDAKGKVDP 420
Query: 421 AVSSSGYHENEAKEHNEVLTRAQENSHKQKHMAQDDAHTKAGDLSLNTQSDAMRTMRKPS 480
VSSSG ENE KEHNEVLT Q NSH+QKHM QDDAHTKA QSD MRTMRKPS
Sbjct: 421 VVSSSGCLENEVKEHNEVLTSVQGNSHQQKHMVQDDAHTKA-------QSDTMRTMRKPS 480
Query: 481 QKAMRTLFVNGIPQQSNRAELILSHFKKYGEVIDIYIPANSQHAFVQFSKREEAEAALKS 540
QKA RTLFVNGIPQQSN+ E +LSHFKKYGEVIDIYIPANSQ AFVQFSKREEAEAALKS
Sbjct: 481 QKATRTLFVNGIPQQSNKTETLLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKS 540
Query: 541 PDAVMGNRFIKLWWANRDNIPDDGVSINNGIHVHPRHIAAASLPSLVVKGKNSVQVSTSK 600
PDAVMGNRFIKLWWANRD+IPDDGV NNGIHV PRHIAAASLPSL +KGKN+ QV TSK
Sbjct: 541 PDAVMGNRFIKLWWANRDSIPDDGVGSNNGIHVPPRHIAAASLPSLAIKGKNTGQVPTSK 600
Query: 601 GSISHPLEFSPVTADRSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLAMKRNDFRRQ 660
SI H L+ S D SHAF+SPKVSSPLQKKLENLEQLKEELRKKQEMLAMKRNDFRRQ
Sbjct: 601 VSIPHSLDSSLAAVDHSHAFNSPKVSSPLQKKLENLEQLKEELRKKQEMLAMKRNDFRRQ 660
Query: 661 LDKLEKQ-TGNKAEAIAGFSAKRLKVGIEAGISKLVTPKASNSSIALASSHIEVNEEHVE 720
LDKLEKQ TGNKAEA+ GFSAKRLKVG+EA ++KLVTPKAS+S IA AS H EVN E+VE
Sbjct: 661 LDKLEKQTTGNKAEAVIGFSAKRLKVGVEADVTKLVTPKASDSGIASASPHTEVNGENVE 720
Query: 721 CPCPEPTTSTVQQESSKFEPVHSLAPKAPFDIDRKKLDSSSTGFRILPPLPAEFTNEDVI 780
CP PEPTTST QQESSKF VH LA K+ FDID KKLDS +TGFRI+PPLPAEFTN DV+
Sbjct: 721 CPYPEPTTSTAQQESSKFGLVHPLASKSAFDIDTKKLDSCATGFRIVPPLPAEFTNVDVV 780
Query: 781 KEHFSSLGDVCGVGLVSEDGDRASNASDICSANVTFLTRHSAERAFVDGKCWQGQPLKLV 840
KEHFSS GDVC V LVSED +R SNAS+ CSANVTFLTRHSAERAF DGKCWQGQ LK +
Sbjct: 781 KEHFSSFGDVCTVELVSEDDNRVSNASNNCSANVTFLTRHSAERAFEDGKCWQGQDLKFI 840
Query: 841 WL-FSGKDPNGASSEASRDVDMEPESKSESILSKEIPKDRIREFNT 878
WL SGK+P+GAS EASRD DMEPES++ESI+ KE P+D N+
Sbjct: 841 WLSSSGKNPDGASPEASRDADMEPESEAESIVFKETPRDEEESENS 878
BLAST of Sed0015855 vs. ExPASy TrEMBL
Match:
A0A6J1IZ04 (zinc finger CCCH domain-containing protein 41-like OS=Cucurbita maxima OX=3661 GN=LOC111481947 PE=4 SV=1)
HSP 1 Score: 1380.2 bits (3571), Expect = 0.0e+00
Identity = 719/879 (81.80%), Postives = 763/879 (86.80%), Query Frame = 0
Query: 1 MELKVSYPNPDISSSDYVSDPEEKDISDDEDDDRNHKHRRREMQSQSSERDTREHVLRPY 60
MELKVSYP ISSS+YVSDPEEKDISDDEDDDRNHKHRRRE +SQS ERDTREHVLRPY
Sbjct: 1 MELKVSYPKLGISSSEYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVLRPY 60
Query: 61 GKRSKPFENGRSFRDNDSHGNEAWKSFNPPTFEKDVPGRFDKRRLGAVPGPRVAGDFNQR 120
GKRSKP ENGRS RDNDS NEAWKSFN PT EKD+PG+FDKRRLG+VPG R+AGDFNQR
Sbjct: 61 GKRSKPSENGRSIRDNDSQANEAWKSFNTPTLEKDIPGKFDKRRLGSVPGARLAGDFNQR 120
Query: 121 IRANHAFSGDLSFGRGRGRESGTWKQF-------DIASQIVQHGSFPPSLFAGRGLPSVS 180
IRAN FSGDLS GRGRGRESGTW QF DIASQIV G FPPSLFAGR LPSVS
Sbjct: 121 IRANQTFSGDLSSGRGRGRESGTWNQFDSRFSPVDIASQIVHRGPFPPSLFAGRSLPSVS 180
Query: 181 TAQTAPWNAYGLIPGIPNSGLETMHSLGLQGTLRPPNNPPLNIGMPRQRCRDFEERGFCL 240
TAQTAPWNA+GLIPGIPNSGLETMH +GLQGTLRPP NPPLNIG+PRQRCRDFEERGFCL
Sbjct: 181 TAQTAPWNAFGLIPGIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL 240
Query: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTILMSGKGL 300
RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNA LMGKTTGSLP VST+ TI+MSGKGL
Sbjct: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKTTGSLPAVSTTPTIVMSGKGL 300
Query: 301 LGKSSKPAVGDDSLAFHGVYSGSGSVAEADLYDPDQPLWNKNCPEKPNALSVMHSSKIGE 360
LGK+SKP VGDDSL FHGVYSGSGS EADLYDPDQPLWN NCPEKPNALS MHSSK +
Sbjct: 301 LGKNSKPGVGDDSLPFHGVYSGSGSATEADLYDPDQPLWNNNCPEKPNALSGMHSSKTDD 360
Query: 361 VESVIGDDPSDRNQVRKCDGANNGCTGRTTATSGSQVTSSSVWGRVGSRNRQDVIGKLDP 420
VES++GDDPSDRNQVRKCD A+NGC+ R TATSGSQVTSSSVWGRVGSRNRQDV GKLDP
Sbjct: 361 VESLMGDDPSDRNQVRKCDAADNGCSSRITATSGSQVTSSSVWGRVGSRNRQDVKGKLDP 420
Query: 421 AVSSSGYHENEAKEHNEVLTRAQENSHKQKHMAQDDAHTKAGDLSLNTQSD--AMRTMRK 480
V+SSG +NE KEHNEVLT Q NSH QKHMAQ DAHT+AG+LS +D AMRTMRK
Sbjct: 421 -VNSSGCLDNEVKEHNEVLTSVQGNSHHQKHMAQGDAHTEAGNLSHKALNDANAMRTMRK 480
Query: 481 PSQKAMRTLFVNGIPQQSNRAELILSHFKKYGEVIDIYIPANSQHAFVQFSKREEAEAAL 540
PSQKA+RTLFVNGIP QSN+ E +LSHFKKYGEVIDIYIPANSQ AFVQFSKREEAEAAL
Sbjct: 481 PSQKALRTLFVNGIPPQSNKTETLLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAAL 540
Query: 541 KSPDAVMGNRFIKLWWANRDNIPDDGVSINNGIHVHPRHIAAASLPSLVVKGKNSVQVST 600
KSPDAVMGNRFIKLWWANRDNIPD GV NNGIHV PRHIAA SL LVVKGKNSVQVST
Sbjct: 541 KSPDAVMGNRFIKLWWANRDNIPDAGVGSNNGIHVPPRHIAAVSLLPLVVKGKNSVQVST 600
Query: 601 SKGSISHPLEFSPVTADRSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLAMKRNDFR 660
SKGS+SHPLE S D SHAFSSPKVSSPLQKKLENLEQLKEELRKKQEML MKRNDFR
Sbjct: 601 SKGSVSHPLESSLAAPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLDMKRNDFR 660
Query: 661 RQLDKLEKQ-TGNKAEAIAGFSAKRLKVGIEAGISKLVTPKASNSSIALASSHIEVNEEH 720
RQLDKLEKQ TGNK E + GFSAKRLKVGIEA SKLVTPKAS+S IALAS H E + EH
Sbjct: 661 RQLDKLEKQTTGNKGETVVGFSAKRLKVGIEADASKLVTPKASDSGIALASPHTEASGEH 720
Query: 721 VECPCPEPTTSTVQQESSKFEPVHSLAPKAPFDIDRKKLDSSSTGFRILPPLPAEFTNED 780
VECPCPEPTTS VQQESSKFEP+H L+ +APFD+D +K S STGFR++PPLP +F NED
Sbjct: 721 VECPCPEPTTSIVQQESSKFEPIHPLSSEAPFDVDGEKSGSCSTGFRVVPPLPVDFANED 780
Query: 781 VIKEHFSSLGDVCGVGLVSEDGDRASNASDICSANVTFLTRHSAERAFVDGKCWQGQPLK 840
VIK+HFSSLGDVC V LVSEDGDR SNAS+ SANVTFLTRHSAERAF DGK WQGQ LK
Sbjct: 781 VIKKHFSSLGDVCTVELVSEDGDRISNASNNFSANVTFLTRHSAERAFKDGKSWQGQDLK 840
Query: 841 LVWL--FSGKDPNG-ASSEASRDVDMEPESKSESILSKE 867
L+WL G+D +G S +ASRD DMEPES+ ESIL KE
Sbjct: 841 LIWLSGSEGEDHDGPLSDDASRDADMEPESEPESILLKE 878
BLAST of Sed0015855 vs. ExPASy TrEMBL
Match:
A0A6J1F911 (zinc finger CCCH domain-containing protein 41-like OS=Cucurbita moschata OX=3662 GN=LOC111441921 PE=4 SV=1)
HSP 1 Score: 1375.9 bits (3560), Expect = 0.0e+00
Identity = 717/879 (81.57%), Postives = 761/879 (86.58%), Query Frame = 0
Query: 1 MELKVSYPNPDISSSDYVSDPEEKDISDDEDDDRNHKHRRREMQSQSSERDTREHVLRPY 60
MELKVSYP ISSS+YVSDPEEKDISDDEDDDRNHKHRRRE +SQS ERDTREHVLRPY
Sbjct: 1 MELKVSYPKLGISSSEYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVLRPY 60
Query: 61 GKRSKPFENGRSFRDNDSHGNEAWKSFNPPTFEKDVPGRFDKRRLGAVPGPRVAGDFNQR 120
GKRSKP ENGRS RDNDS NEAWKSFN PT EKD+PG+FDKRRLGAVPG R+AGDFNQR
Sbjct: 61 GKRSKPSENGRSIRDNDSQANEAWKSFNTPTLEKDIPGKFDKRRLGAVPGARLAGDFNQR 120
Query: 121 IRANHAFSGDLSFGRGRGRESGTWKQF-------DIASQIVQHGSFPPSLFAGRGLPSVS 180
IRAN FSGDLS GRGRGRESGTW QF DIASQIV G FPPSLFAGRGLPSVS
Sbjct: 121 IRANQTFSGDLSSGRGRGRESGTWNQFDSRFSPVDIASQIVHRGPFPPSLFAGRGLPSVS 180
Query: 181 TAQTAPWNAYGLIPGIPNSGLETMHSLGLQGTLRPPNNPPLNIGMPRQRCRDFEERGFCL 240
TAQTAPWNA+GL+PGIPN GLETMH +GLQGTLRPP NPPLNIG+PRQRCRDFEERGFCL
Sbjct: 181 TAQTAPWNAFGLLPGIPNGGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL 240
Query: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTILMSGKGL 300
RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNA LMGKTTGSLP VST+ST +MSGKGL
Sbjct: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKTTGSLPAVSTTSTTVMSGKGL 300
Query: 301 LGKSSKPAVGDDSLAFHGVYSGSGSVAEADLYDPDQPLWNKNCPEKPNALSVMHSSKIGE 360
LGK+SKP VGDDSL FHGVYSGSGS EADLYDPDQPLWN NCPEKPNALS MHSSKI +
Sbjct: 301 LGKNSKPGVGDDSLPFHGVYSGSGSATEADLYDPDQPLWNNNCPEKPNALSGMHSSKIDD 360
Query: 361 VESVIGDDPSDRNQVRKCDGANNGCTGRTTATSGSQVTSSSVWGRVGSRNRQDVIGKLDP 420
VES++GDDPSDRNQVRKCD A+NGC+ R ATSGSQVTSSSVWGRVGSRNRQDV GKLDP
Sbjct: 361 VESLMGDDPSDRNQVRKCDAADNGCSSRIAATSGSQVTSSSVWGRVGSRNRQDVKGKLDP 420
Query: 421 AVSSSGYHENEAKEHNEVLTRAQENSHKQKHMAQDDAHTKAGDLSLNTQSD--AMRTMRK 480
V+SSG +NE KEHNEVLT Q NSH QKHMAQ DAHT+AG+L +D AMRTMRK
Sbjct: 421 -VNSSGCLDNEVKEHNEVLTSVQGNSHPQKHMAQGDAHTEAGNLPHKALNDANAMRTMRK 480
Query: 481 PSQKAMRTLFVNGIPQQSNRAELILSHFKKYGEVIDIYIPANSQHAFVQFSKREEAEAAL 540
PSQKA+RTLFVNGIP QSN+ E +LSHFKKYGEVIDIYIPANSQ AFVQFSKREEAEAAL
Sbjct: 481 PSQKALRTLFVNGIPLQSNKRETLLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAAL 540
Query: 541 KSPDAVMGNRFIKLWWANRDNIPDDGVSINNGIHVHPRHIAAASLPSLVVKGKNSVQVST 600
KSPDAVMGNRFIKLWWANRD+IPD GV NNGIHV PRHIAA SL LVVKGKNSVQVST
Sbjct: 541 KSPDAVMGNRFIKLWWANRDSIPDAGVGSNNGIHVPPRHIAAVSLLPLVVKGKNSVQVST 600
Query: 601 SKGSISHPLEFSPVTADRSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLAMKRNDFR 660
SKGS+SHPLE S D SHAFSSPKVSSPLQKKLENLEQLKEELRKKQEML MKRNDFR
Sbjct: 601 SKGSVSHPLESSLAAPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLDMKRNDFR 660
Query: 661 RQLDKLEKQ-TGNKAEAIAGFSAKRLKVGIEAGISKLVTPKASNSSIALASSHIEVNEEH 720
RQLDKLEKQ TGNK E + G SAKRLKVGIEA SKLVTPKAS+S IALAS H E + EH
Sbjct: 661 RQLDKLEKQATGNKGETVVGLSAKRLKVGIEADASKLVTPKASDSGIALASPHTEASGEH 720
Query: 721 VECPCPEPTTSTVQQESSKFEPVHSLAPKAPFDIDRKKLDSSSTGFRILPPLPAEFTNED 780
VECPCPEPTTS VQQESSKFEPVH L+ + PFD+D +K S STGFR++PPLP +F NED
Sbjct: 721 VECPCPEPTTSIVQQESSKFEPVHPLSSETPFDVDGEKSGSCSTGFRVVPPLPVDFANED 780
Query: 781 VIKEHFSSLGDVCGVGLVSEDGDRASNASDICSANVTFLTRHSAERAFVDGKCWQGQPLK 840
IK+HFSSLGDVC V LVSEDGDR SNAS+ SANVTFLTRHSAERAF DGK WQGQ LK
Sbjct: 781 AIKKHFSSLGDVCAVELVSEDGDRISNASNNFSANVTFLTRHSAERAFKDGKSWQGQDLK 840
Query: 841 LVWLFS--GKDPNGA-SSEASRDVDMEPESKSESILSKE 867
L+WL S G+D +GA S +ASRD DMEPES+ ESIL KE
Sbjct: 841 LIWLSSSEGEDHDGALSDDASRDADMEPESEPESILLKE 878
BLAST of Sed0015855 vs. ExPASy TrEMBL
Match:
A0A1S3B8B1 (zinc finger CCCH domain-containing protein 41 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487115 PE=4 SV=1)
HSP 1 Score: 1365.5 bits (3533), Expect = 0.0e+00
Identity = 713/878 (81.21%), Postives = 757/878 (86.22%), Query Frame = 0
Query: 1 MELKVSYPNPDISSSDYVSDPEEKDISDDEDDDRNHKHRRREMQSQSSERDTREHVLRPY 60
MELKVSYP P ISSSDYVSDPEEKDISDDEDDDRNHKHRRRE +SQS ERDTREHVLRPY
Sbjct: 1 MELKVSYPKPGISSSDYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVLRPY 60
Query: 61 GKRSKPFENGRSFRDNDSHGNEAWKSFNPPTFEKDVPGRFDKRRLGAVPGPRVAGDFNQR 120
GKR+KPFENGRSFRDNDS NEAWKSFN PT EKD PG+FDKRRLG VPGPRV GDFNQR
Sbjct: 61 GKRNKPFENGRSFRDNDSQANEAWKSFNAPTLEKDTPGKFDKRRLGGVPGPRVVGDFNQR 120
Query: 121 IRANHAFSGDLSFGRGRGRESGTWKQF-------DIASQIVQHGSFPPSLFAGRGLPSVS 180
IR N FSGDLS GRGRGR+SG W QF DIASQIV HGSFPPSLFAGRGLPSVS
Sbjct: 121 IRGNQGFSGDLSSGRGRGRDSGAWNQFDSRFSPVDIASQIVHHGSFPPSLFAGRGLPSVS 180
Query: 181 TAQTAPWNAYGLIPGIPNSGLETMHSLGLQGTLRPPNNPPLNIGMPRQRCRDFEERGFCL 240
TAQTAPWNA+GLIPGIP SGLETMH +GLQGTLRPP NPPLNIG+PRQRCRDFEERGFCL
Sbjct: 181 TAQTAPWNAFGLIPGIPTSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL 240
Query: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTILMSGKGL 300
RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNA L+GKTTGSLP VSTSST +MSGKGL
Sbjct: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLIGKTTGSLPAVSTSSTTVMSGKGL 300
Query: 301 LGKSSKPAVGDDSLAFHGVYSGSGSVAEADLYDPDQPLWNKNCPEKPNALSVMHSSKIGE 360
LGK+ KP+VGDDSL FHGVYSGSGS AEADLYDPDQPLWN +CPEKPNALS MHSSKI E
Sbjct: 301 LGKNIKPSVGDDSLPFHGVYSGSGSAAEADLYDPDQPLWNNSCPEKPNALSGMHSSKIDE 360
Query: 361 VESVIGDDPSDRNQVRKCDGANNGCTGRTTATSGSQVTSSSVWGRVGSRNRQDVIGKLDP 420
VES +GDDPSDRNQVRKCD +NGCT R TA SGSQVTSSSVWGRVGSRNRQDV GKLDP
Sbjct: 361 VESFMGDDPSDRNQVRKCDAGDNGCTSRITAPSGSQVTSSSVWGRVGSRNRQDVKGKLDP 420
Query: 421 AVSSSGYHENEAKEHNEVLTRAQENSHKQKHMAQDDAHTKAGDLSLNTQSDA--MRTMRK 480
V++SG +NE KE N VL Q NSH+QKHMAQDD H KAGDLSL QSDA MRTMRK
Sbjct: 421 -VNASGCLDNEVKEQNVVLASVQGNSHQQKHMAQDDPHNKAGDLSLKAQSDANTMRTMRK 480
Query: 481 PSQKAMRTLFVNGIPQQSNRAELILSHFKKYGEVIDIYIPANSQHAFVQFSKREEAEAAL 540
PSQKA TLFVNGIP QSN+ E +LSHF KYGEVIDIYIPAN+Q AFVQFSKREEAEAAL
Sbjct: 481 PSQKATCTLFVNGIPLQSNKTETLLSHFNKYGEVIDIYIPANTQRAFVQFSKREEAEAAL 540
Query: 541 KSPDAVMGNRFIKLWWANRDNIPDDGVSINNGIHVHPRHIAAASLPSLVVKGKNSVQVST 600
KSPDAVMGNRFIKLWWANRD+IPDDGVS NNGIHV PRHIAAASLPS+ VKGKNSV VST
Sbjct: 541 KSPDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVPPRHIAAASLPSIAVKGKNSVPVST 600
Query: 601 SKGSISHPLEFSPVTADRSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLAMKRNDFR 660
SKGSISHPL+ S D SHAFSSPKVSSPLQKKLENLEQLKEELRKKQ+ML MKRNDFR
Sbjct: 601 SKGSISHPLDSSLAAPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQQMLDMKRNDFR 660
Query: 661 RQLDKLEKQ-TGNKAEAIAGFSAKRLKVGIEAGISKLVTPKASNSSIALASSHIEVNEEH 720
RQLDKLEKQ TGNKAEA+ G SAKRLKVGIEA SKL PKAS+SS+ALAS H EVN EH
Sbjct: 661 RQLDKLEKQATGNKAEAVTGSSAKRLKVGIEADTSKL-GPKASDSSVALASPHTEVNGEH 720
Query: 721 VECPCPEPTTSTVQQESSKFEPVHSLAPKAPFDIDRKKLDSSSTGFRILPPLPAEFTNED 780
PEPTTS VQQESSKFEPV SL +APFD + +KL S STGF+I+PPLPA+F NED
Sbjct: 721 -----PEPTTSIVQQESSKFEPVDSLTTEAPFDNEGEKLGSCSTGFKIVPPLPADFANED 780
Query: 781 VIKEHFSSLGDVCGVGLVSEDGDRASNASDICSANVTFLTRHSAERAFVDGKCWQGQPLK 840
VIK+HFS+LGDVC V LVSEDG R SNAS+ CSANVTFLTRHSAERAFVDG+ WQGQ LK
Sbjct: 781 VIKQHFSALGDVCTVELVSEDGVRISNASNNCSANVTFLTRHSAERAFVDGRSWQGQDLK 840
Query: 841 LVWLFSGKDPNGASSEASRDVDMEPESKSESILSKEIP 869
+WL S KDP+ SS+ SRD DMEPE+++E I E P
Sbjct: 841 FIWLSSDKDPHRTSSDTSRDADMEPENEAEIISLNETP 871
BLAST of Sed0015855 vs. ExPASy TrEMBL
Match:
A0A5A7UCY7 (Zinc finger CCCH domain-containing protein 41 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G00130 PE=4 SV=1)
HSP 1 Score: 1364.7 bits (3531), Expect = 0.0e+00
Identity = 713/878 (81.21%), Postives = 756/878 (86.10%), Query Frame = 0
Query: 1 MELKVSYPNPDISSSDYVSDPEEKDISDDEDDDRNHKHRRREMQSQSSERDTREHVLRPY 60
MELKVSYP P ISSSDYVSDPEEKDISDDEDDDRNHKHRRRE +SQS ERDTREHVLRPY
Sbjct: 1 MELKVSYPKPGISSSDYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVLRPY 60
Query: 61 GKRSKPFENGRSFRDNDSHGNEAWKSFNPPTFEKDVPGRFDKRRLGAVPGPRVAGDFNQR 120
GKR+KPFENGRSFRDNDS NEAWKSFN PT EKD PG+FDKRRLG VPGPRV GDFNQR
Sbjct: 61 GKRNKPFENGRSFRDNDSQANEAWKSFNAPTLEKDTPGKFDKRRLGGVPGPRVVGDFNQR 120
Query: 121 IRANHAFSGDLSFGRGRGRESGTWKQF-------DIASQIVQHGSFPPSLFAGRGLPSVS 180
IR N FSGDLS GRGRGR+SG W QF DIASQIV HGSFPPSLFAGRGLPSVS
Sbjct: 121 IRGNQGFSGDLSSGRGRGRDSGAWNQFDSRFSPVDIASQIVHHGSFPPSLFAGRGLPSVS 180
Query: 181 TAQTAPWNAYGLIPGIPNSGLETMHSLGLQGTLRPPNNPPLNIGMPRQRCRDFEERGFCL 240
TAQTAPWNA+GLIPGIP SGLETMH +GLQGTLRPP NPPLNIG+PRQRCRDFEERGFCL
Sbjct: 181 TAQTAPWNAFGLIPGIPTSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL 240
Query: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTILMSGKGL 300
RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNA L+GKTTGSLP VSTSST +MSGKGL
Sbjct: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLIGKTTGSLPAVSTSSTTVMSGKGL 300
Query: 301 LGKSSKPAVGDDSLAFHGVYSGSGSVAEADLYDPDQPLWNKNCPEKPNALSVMHSSKIGE 360
LGK+ KP+VGDDSL FHGVYSGSGS AEADLYDPDQPLWN +CPEKPNALS MHSSKI E
Sbjct: 301 LGKNIKPSVGDDSLPFHGVYSGSGSAAEADLYDPDQPLWNNSCPEKPNALSGMHSSKIDE 360
Query: 361 VESVIGDDPSDRNQVRKCDGANNGCTGRTTATSGSQVTSSSVWGRVGSRNRQDVIGKLDP 420
VES +GDDPSDRNQVRKCD +NGCT R TA SGSQVTSSSVWGRVGSRNRQDV GKLDP
Sbjct: 361 VESFMGDDPSDRNQVRKCDAGDNGCTSRITAPSGSQVTSSSVWGRVGSRNRQDVKGKLDP 420
Query: 421 AVSSSGYHENEAKEHNEVLTRAQENSHKQKHMAQDDAHTKAGDLSLNTQSDA--MRTMRK 480
V++SG +NE KE N VL Q NSH+QKHMAQDD H KAGDLSL QSDA MRTMRK
Sbjct: 421 -VNASGCLDNEVKEQNVVLASVQGNSHQQKHMAQDDPHNKAGDLSLKAQSDANTMRTMRK 480
Query: 481 PSQKAMRTLFVNGIPQQSNRAELILSHFKKYGEVIDIYIPANSQHAFVQFSKREEAEAAL 540
PSQKA TLFVNGIP QSN+ E +LSHF KYGEVIDIYIPANSQ AFVQFSKREEAEAAL
Sbjct: 481 PSQKATCTLFVNGIPLQSNKTETLLSHFNKYGEVIDIYIPANSQRAFVQFSKREEAEAAL 540
Query: 541 KSPDAVMGNRFIKLWWANRDNIPDDGVSINNGIHVHPRHIAAASLPSLVVKGKNSVQVST 600
KSPDAVMGNRFIKLWWANRD+IPDDGVS NNGIHV PRHIAAASLPS+ VKGKNSV VST
Sbjct: 541 KSPDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVPPRHIAAASLPSIAVKGKNSVPVST 600
Query: 601 SKGSISHPLEFSPVTADRSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLAMKRNDFR 660
SKGSISHPL+ S D SHAFSSPKVSSPLQKKLENLEQLKEELRKKQ+ML MKRNDFR
Sbjct: 601 SKGSISHPLDSSLAAPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQQMLDMKRNDFR 660
Query: 661 RQLDKLEKQ-TGNKAEAIAGFSAKRLKVGIEAGISKLVTPKASNSSIALASSHIEVNEEH 720
RQLDKLEKQ TGNKAEA+ G SAKRLKVGIEA SKL PKAS+S +ALAS H EVN EH
Sbjct: 661 RQLDKLEKQATGNKAEAVTGSSAKRLKVGIEADTSKL-GPKASDSCVALASPHTEVNGEH 720
Query: 721 VECPCPEPTTSTVQQESSKFEPVHSLAPKAPFDIDRKKLDSSSTGFRILPPLPAEFTNED 780
PEPTTS VQQESSKFEPV SL +APFD + +KL S STGF+I+PPLPA+F NED
Sbjct: 721 -----PEPTTSIVQQESSKFEPVDSLTTEAPFDNEGEKLGSCSTGFKIVPPLPADFANED 780
Query: 781 VIKEHFSSLGDVCGVGLVSEDGDRASNASDICSANVTFLTRHSAERAFVDGKCWQGQPLK 840
VIK+HFS+LGDVC V LVSEDG R SNAS+ CSANVTFLTRHSAERAFVDG+ WQGQ LK
Sbjct: 781 VIKQHFSALGDVCTVELVSEDGVRISNASNNCSANVTFLTRHSAERAFVDGRSWQGQDLK 840
Query: 841 LVWLFSGKDPNGASSEASRDVDMEPESKSESILSKEIP 869
+WL S KDP+ SS+ SRD DMEPE+++E I E P
Sbjct: 841 FIWLSSDKDPHRTSSDTSRDADMEPENEAEIISLNETP 871
BLAST of Sed0015855 vs. TAIR 10
Match:
AT3G27700.1 (zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein )
HSP 1 Score: 556.2 bits (1432), Expect = 4.6e-158
Identity = 378/912 (41.45%), Postives = 526/912 (57.68%), Query Frame = 0
Query: 1 MELKVSYPNPDI-SSSDYVSDPEEK-DISDDEDDDRNHKHRRR-EMQSQSSERDTREHVL 60
MEL VS P + S D +SDPEE+ +IS++EDDDRNHKHRR+ E +SQS E+D+ +
Sbjct: 1 MELSVSSPKQSVLSPPDCMSDPEEEHEISEEEDDDRNHKHRRKEETRSQSLEQDSSDQAF 60
Query: 61 -RPYGKRSKPFENGRSFRDNDSHGNEAWKSFNPPTFEKDVPGRFDKRRLGAVPGPRVAGD 120
RPY K + +ENG SF ++ +KR G G RV D
Sbjct: 61 SRPYRKNYRHYENGNSFSEH------------------------EKRSFGTGSGQRVQFD 120
Query: 121 FNQRIRANHAFSGDLSFGRGRGRESGTWKQ-------FDIASQIVQHGSFPPSLFAGRGL 180
NQR+R+N FS D GRGRG G+W Q D++S +VQ GS +F GRGL
Sbjct: 121 -NQRMRSNPMFSRDSGPGRGRG-NYGSWAQRDSRFNPVDLSSHMVQVGSMGQGMFGGRGL 180
Query: 181 PSVSTAQTAPWNAYGLIPGIPNSGLETMHSLGLQGTLRPPNNPPLNIGMPRQRCRDFEER 240
VS AQ+APW +G+IPG+PN GL+ H LQG+LRPP N PLN+G+PRQRCRDFEER
Sbjct: 181 AGVSAAQSAPWPPFGMIPGVPNGGLDGFHH--LQGSLRPPLNAPLNMGIPRQRCRDFEER 240
Query: 241 GFCLRGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTILMS 300
GFCLRGDMCPMEHG+NRIVV+DVQSLSQFNLP+S+P A + ++ +P M+
Sbjct: 241 GFCLRGDMCPMEHGMNRIVVDDVQSLSQFNLPVSVPGAPHLAASSKQVP-AQFGGASFMN 300
Query: 301 GKGLLGKSSKPAVGDDSLAFHGVYSGSGSVAEADLYDPDQPLWNKNCPEKPNALSVMHSS 360
KG G++++ + D L + Y +G D YDPDQPLWN + E A+S ++S
Sbjct: 301 PKGAHGRTNEGGMAVDGLGYGDAYPSAGG---TDFYDPDQPLWNNSTGETSGAISTLNSH 360
Query: 361 KIGEVESVIGDDPSDRNQVRKCDGANNGCTGRTTATSGSQVTSSSVWGRV-GSRNRQDVI 420
+ E + + D NQ D A NGC R S+ TS SVWGR+ GS ++ +
Sbjct: 361 GVDENVAPL----DDSNQ----DAAENGCGIR-----DSRSTSQSVWGRMKGSNSQANSK 420
Query: 421 GKLDPAVSSSGYHENEAKEHNEVLTRAQENSHKQKHMAQDDAHTKAGDLSLNTQSDAMRT 480
K D ++SS E++ KE ++ KQ H+ + A K D S N +D M
Sbjct: 421 EKADAVLNSSAVPEDQLKE----VSVNSSRHGKQNHVGESVA--KVVD-SSNISNDMMNN 480
Query: 481 MRKPSQKAMRTLFVNGIPQQSNRAELILSHFKKYGEVIDIYIPANSQHAFVQFSKREEAE 540
RKP+QKAMRTLFVN +P +SNR +LIL+HF+K+G+VIDI+IP NS+ AFVQFSKREEAE
Sbjct: 481 TRKPTQKAMRTLFVNYVPHESNRRDLILAHFQKFGKVIDIHIPVNSERAFVQFSKREEAE 540
Query: 541 AALKSPDAVMGNRFIKLWWANRDNIPDDGVSINNGIHVHPRHIAAASLPS---LVVKGKN 600
+AL++PDAVMGNRFIKLWWANRD+IPD+G+S +G + R + A+ + + K+
Sbjct: 541 SALRAPDAVMGNRFIKLWWANRDSIPDNGLSTGSGASMKGRSMTASGAQNQFPIAAASKS 600
Query: 601 SVQVSTSK-------GSISHPLEFSPVTADRSHAFSSPKVSSPLQKKLENLEQLKEELRK 660
+ S +K G+ S + PV S PKV+ QKK + LE+LKE LRK
Sbjct: 601 NHVSSIAKVPTFQTGGAPSSSEQPKPVVV----TTSGPKVTPLQQKKADTLERLKETLRK 660
Query: 661 KQEMLAMKRNDFRRQLDKLEKQ-TGNKAEAIAGFSAKRLKVGIEAGI-SKLVTPKASNSS 720
KQEML KRN++R++L LEKQ T K E AKR+K+ + + + +PK +S+
Sbjct: 661 KQEMLEQKRNEYRKKLATLEKQGTVVKREEADEPDAKRVKLDTASDSGAAIASPKTESST 720
Query: 721 IALASSHIEVNEEHVECPCPEPTTSTVQQESSKFEPVHSLAPKAPFDIDRKKLDSSSTGF 780
++ + P P + +Q F + + AP ++R KLD+ +T
Sbjct: 721 DKKVPILKPLSTAKLSTETPSPDSKNFKQRPYSF----TTSLNAPM-VNRYKLDNRTTTI 780
Query: 781 RILPPLPAEFTNEDVIKEHFSSLGDVCGVGLVS----EDGDRASNASDICSANVTFLTRH 840
+++PPLP + V+KEHFSS G+V V L + G ++ +A VTF+ R
Sbjct: 781 KVVPPLPTGLADVAVVKEHFSSYGEVSKVELEDNASIDSGKDHETQNESRAACVTFVKRS 840
Query: 841 SAERAFVDGKCWQGQPLKLVWL-------FSGKDPNGASSEASRDVDMEPESKSESILSK 878
+AE+AF + KCWQ L+LVW+ + + N S SRD ++ ++K S+ +
Sbjct: 841 AAEKAFANAKCWQEHTLQLVWVTRQSNRESNNNNNNSNSLSVSRD-NLSSKNKCASVSND 850
BLAST of Sed0015855 vs. TAIR 10
Match:
AT3G27700.2 (zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein )
HSP 1 Score: 556.2 bits (1432), Expect = 4.6e-158
Identity = 378/912 (41.45%), Postives = 526/912 (57.68%), Query Frame = 0
Query: 1 MELKVSYPNPDI-SSSDYVSDPEEK-DISDDEDDDRNHKHRRR-EMQSQSSERDTREHVL 60
MEL VS P + S D +SDPEE+ +IS++EDDDRNHKHRR+ E +SQS E+D+ +
Sbjct: 1 MELSVSSPKQSVLSPPDCMSDPEEEHEISEEEDDDRNHKHRRKEETRSQSLEQDSSDQAF 60
Query: 61 -RPYGKRSKPFENGRSFRDNDSHGNEAWKSFNPPTFEKDVPGRFDKRRLGAVPGPRVAGD 120
RPY K + +ENG SF ++ +KR G G RV D
Sbjct: 61 SRPYRKNYRHYENGNSFSEH------------------------EKRSFGTGSGQRVQFD 120
Query: 121 FNQRIRANHAFSGDLSFGRGRGRESGTWKQ-------FDIASQIVQHGSFPPSLFAGRGL 180
NQR+R+N FS D GRGRG G+W Q D++S +VQ GS +F GRGL
Sbjct: 121 -NQRMRSNPMFSRDSGPGRGRG-NYGSWAQRDSRFNPVDLSSHMVQVGSMGQGMFGGRGL 180
Query: 181 PSVSTAQTAPWNAYGLIPGIPNSGLETMHSLGLQGTLRPPNNPPLNIGMPRQRCRDFEER 240
VS AQ+APW +G+IPG+PN GL+ H LQG+LRPP N PLN+G+PRQRCRDFEER
Sbjct: 181 AGVSAAQSAPWPPFGMIPGVPNGGLDGFHH--LQGSLRPPLNAPLNMGIPRQRCRDFEER 240
Query: 241 GFCLRGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTILMS 300
GFCLRGDMCPMEHG+NRIVV+DVQSLSQFNLP+S+P A + ++ +P M+
Sbjct: 241 GFCLRGDMCPMEHGMNRIVVDDVQSLSQFNLPVSVPGAPHLAASSKQVP-AQFGGASFMN 300
Query: 301 GKGLLGKSSKPAVGDDSLAFHGVYSGSGSVAEADLYDPDQPLWNKNCPEKPNALSVMHSS 360
KG G++++ + D L + Y +G D YDPDQPLWN + E A+S ++S
Sbjct: 301 PKGAHGRTNEGGMAVDGLGYGDAYPSAGG---TDFYDPDQPLWNNSTGETSGAISTLNSH 360
Query: 361 KIGEVESVIGDDPSDRNQVRKCDGANNGCTGRTTATSGSQVTSSSVWGRV-GSRNRQDVI 420
+ E + + D NQ D A NGC R S+ TS SVWGR+ GS ++ +
Sbjct: 361 GVDENVAPL----DDSNQ----DAAENGCGIR-----DSRSTSQSVWGRMKGSNSQANSK 420
Query: 421 GKLDPAVSSSGYHENEAKEHNEVLTRAQENSHKQKHMAQDDAHTKAGDLSLNTQSDAMRT 480
K D ++SS E++ KE ++ KQ H+ + A K D S N +D M
Sbjct: 421 EKADAVLNSSAVPEDQLKE----VSVNSSRHGKQNHVGESVA--KVVD-SSNISNDMMNN 480
Query: 481 MRKPSQKAMRTLFVNGIPQQSNRAELILSHFKKYGEVIDIYIPANSQHAFVQFSKREEAE 540
RKP+QKAMRTLFVN +P +SNR +LIL+HF+K+G+VIDI+IP NS+ AFVQFSKREEAE
Sbjct: 481 TRKPTQKAMRTLFVNYVPHESNRRDLILAHFQKFGKVIDIHIPVNSERAFVQFSKREEAE 540
Query: 541 AALKSPDAVMGNRFIKLWWANRDNIPDDGVSINNGIHVHPRHIAAASLPS---LVVKGKN 600
+AL++PDAVMGNRFIKLWWANRD+IPD+G+S +G + R + A+ + + K+
Sbjct: 541 SALRAPDAVMGNRFIKLWWANRDSIPDNGLSTGSGASMKGRSMTASGAQNQFPIAAASKS 600
Query: 601 SVQVSTSK-------GSISHPLEFSPVTADRSHAFSSPKVSSPLQKKLENLEQLKEELRK 660
+ S +K G+ S + PV S PKV+ QKK + LE+LKE LRK
Sbjct: 601 NHVSSIAKVPTFQTGGAPSSSEQPKPVVV----TTSGPKVTPLQQKKADTLERLKETLRK 660
Query: 661 KQEMLAMKRNDFRRQLDKLEKQ-TGNKAEAIAGFSAKRLKVGIEAGI-SKLVTPKASNSS 720
KQEML KRN++R++L LEKQ T K E AKR+K+ + + + +PK +S+
Sbjct: 661 KQEMLEQKRNEYRKKLATLEKQGTVVKREEADEPDAKRVKLDTASDSGAAIASPKTESST 720
Query: 721 IALASSHIEVNEEHVECPCPEPTTSTVQQESSKFEPVHSLAPKAPFDIDRKKLDSSSTGF 780
++ + P P + +Q F + + AP ++R KLD+ +T
Sbjct: 721 DKKVPILKPLSTAKLSTETPSPDSKNFKQRPYSF----TTSLNAPM-VNRYKLDNRTTTI 780
Query: 781 RILPPLPAEFTNEDVIKEHFSSLGDVCGVGLVS----EDGDRASNASDICSANVTFLTRH 840
+++PPLP + V+KEHFSS G+V V L + G ++ +A VTF+ R
Sbjct: 781 KVVPPLPTGLADVAVVKEHFSSYGEVSKVELEDNASIDSGKDHETQNESRAACVTFVKRS 840
Query: 841 SAERAFVDGKCWQGQPLKLVWL-------FSGKDPNGASSEASRDVDMEPESKSESILSK 878
+AE+AF + KCWQ L+LVW+ + + N S SRD ++ ++K S+ +
Sbjct: 841 AAEKAFANAKCWQEHTLQLVWVTRQSNRESNNNNNNSNSLSVSRD-NLSSKNKCASVSND 850
BLAST of Sed0015855 vs. TAIR 10
Match:
AT1G49600.1 (RNA-binding protein 47A )
HSP 1 Score: 47.4 bits (111), Expect = 7.0e-05
Identity = 24/75 (32.00%), Postives = 39/75 (52.00%), Query Frame = 0
Query: 479 TLFVNGIPQQSNRAELILSHFKKYGEVIDIYIPANSQHAFVQFSKREEAEAALKSPD-AV 538
T+FV G+ +L + F +GEV+ + IP FVQF+ R+ AE A+ + + V
Sbjct: 328 TIFVGGLDADVTEEDL-MQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTV 387
Query: 539 MGNRFIKLWWANRDN 553
+G ++L W N
Sbjct: 388 IGKNTVRLSWGRSPN 401
BLAST of Sed0015855 vs. TAIR 10
Match:
AT1G11650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 47.0 bits (110), Expect = 9.2e-05
Identity = 26/80 (32.50%), Postives = 44/80 (55.00%), Query Frame = 0
Query: 479 TLFVNGIPQQSNRAELILSHFKKYGEVIDIYIPANSQHAFVQFSKREEAEAALKSPDAV- 538
T+FV G+ S + + + F +YGE++ + IPA + FVQFS++ AE AL+ + V
Sbjct: 262 TVFVGGL-DASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQ 321
Query: 539 MGNRFIKLWWANRDNIPDDG 558
+G ++L W + G
Sbjct: 322 LGGTTVRLSWGRSPSNKQSG 340
BLAST of Sed0015855 vs. TAIR 10
Match:
AT4G27000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 44.7 bits (104), Expect = 4.5e-04
Identity = 27/82 (32.93%), Postives = 44/82 (53.66%), Query Frame = 0
Query: 479 TLFVNGIPQQSNRAELILSHFKKYGEVIDIYIPANSQHAFVQFSKREEAEAALKSPDAV- 538
T+FV + Q +L S F ++GE++ + IPA + FVQ++ R AE AL +
Sbjct: 279 TIFVGAVDQSVTEDDL-KSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQ 338
Query: 539 MGNRFIKLWW----ANRDNIPD 556
+G + I+L W +N+ PD
Sbjct: 339 LGGQSIRLSWGRSPSNKQTQPD 359
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038903817.1 | 0.0e+00 | 82.55 | zinc finger CCCH domain-containing protein 41 [Benincasa hispida] >XP_038903818.... | [more] |
XP_022152149.1 | 0.0e+00 | 81.26 | zinc finger CCCH domain-containing protein 41 [Momordica charantia] | [more] |
XP_023528107.1 | 0.0e+00 | 81.91 | zinc finger CCCH domain-containing protein 41-like [Cucurbita pepo subsp. pepo] | [more] |
XP_022983332.1 | 0.0e+00 | 81.80 | zinc finger CCCH domain-containing protein 41-like [Cucurbita maxima] | [more] |
XP_022934880.1 | 0.0e+00 | 81.57 | zinc finger CCCH domain-containing protein 41-like [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Q9LVX1 | 6.5e-157 | 41.45 | Zinc finger CCCH domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN... | [more] |
Q0JDM0 | 2.0e-137 | 39.91 | Zinc finger CCCH domain-containing protein 27 OS=Oryza sativa subsp. japonica OX... | [more] |
Q9VIV2 | 1.0e-08 | 22.84 | Zinc finger protein swm OS=Drosophila melanogaster OX=7227 GN=swm PE=1 SV=1 | [more] |
Q2T9I5 | 3.3e-07 | 22.93 | RNA-binding protein 26 OS=Xenopus laevis OX=8355 GN=rbm26 PE=2 SV=2 | [more] |
Q6NZN0 | 3.6e-06 | 23.20 | RNA-binding protein 26 OS=Mus musculus OX=10090 GN=Rbm26 PE=1 SV=2 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DF65 | 0.0e+00 | 81.26 | zinc finger CCCH domain-containing protein 41 OS=Momordica charantia OX=3673 GN=... | [more] |
A0A6J1IZ04 | 0.0e+00 | 81.80 | zinc finger CCCH domain-containing protein 41-like OS=Cucurbita maxima OX=3661 G... | [more] |
A0A6J1F911 | 0.0e+00 | 81.57 | zinc finger CCCH domain-containing protein 41-like OS=Cucurbita moschata OX=3662... | [more] |
A0A1S3B8B1 | 0.0e+00 | 81.21 | zinc finger CCCH domain-containing protein 41 isoform X1 OS=Cucumis melo OX=3656... | [more] |
A0A5A7UCY7 | 0.0e+00 | 81.21 | Zinc finger CCCH domain-containing protein 41 isoform X1 OS=Cucumis melo var. ma... | [more] |
Match Name | E-value | Identity | Description | |
AT3G27700.1 | 4.6e-158 | 41.45 | zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing ... | [more] |
AT3G27700.2 | 4.6e-158 | 41.45 | zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing ... | [more] |
AT1G49600.1 | 7.0e-05 | 32.00 | RNA-binding protein 47A | [more] |
AT1G11650.2 | 9.2e-05 | 32.50 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT4G27000.1 | 4.5e-04 | 32.93 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |