Sed0015811 (gene) Chayote v1

Overview


Name	Sed0015811
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Nuclear transcription factor Y subunit
Location	LG12: 25803734 .. 25808637 (-)
RNA-Seq Expression	Sed0015811
Synteny	Sed0015811

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAAACTTCAAACAAAGTCTTCTCACTCTGAATTTTTTCTTTTGGAATTCACAGTTTTTTCAATCCTCCCTCAAATGGATTCAATTTCAATCTTTTGAAACAATTATCTGTGATTTCTCTTCGCCCCCATCAGATTTCCCCCCTTTTTTTTCCATTGGAACGGTGCTCCAATTTCTTCCGGTAAGCTGTTTTTTGTCTTGGATTTTGTCCTTCCGCTTTCTATGGCTGTTTGATTTCTAGGGTATTCCCGCAATTCAGTTTTTAACTCTTTTTTTGGGGTTTTGGGTTTGTGGGGCGATTGATTTTCTTGGGATTTGGTTTGTTTCTGCGGTTGTTTGGGGGAATTGCAGGTGATGTTATGGAAATTCGAAGCCCATTGATTTTTATGTACCCATCATTAGTTTAGTGATTAATTTCATGCTGTAGGGTCCTCGATATCAGTCGAGGTACACACGCTGGACAGACCCTAAGGGGGAATACAACCTTTATAGGATATATAAAGGGACTGAACTGTGTTGTGTCTCTGGCTTGGGGTCTTCAAGGCATGGTTCCTTGGAGGTCTCAACTTCGAGCCCAACGAGTGAGTTTAATTGTAAAAACTCTTGTTATTCCTGCGTGCGGGACCGGGTGTCCCTGGTTTTTGGACAGCAAAGCTCCGATTTTCTGGTTTTAAACCAAAAAAAAGAAAAATCAATAGTTTCTAGTTTATCCTTGTTTTCTCTGCTTATGTTTGTGGCAATTGGGGCTAATCCTAGTTAAATTTTGATATATGACATGGTTGATAATATTCTGTGGAGCTTCATTTTTTTATGCTCTTTGGTCACCACAACTTGGTGATCTAATTTTCAAGGGGTGTGAAGAGAGATGGGAGAGTGTAGCCATCCTGGAAAACTAAATGGAGTCATACATATTGCATAAAACCGGAGAGTTGTTGAAAACAATTTAGTCAAAAGGTATTGAAGAGATTTAATAGTACAAGATTGAATCATGAAAAACATTTTCTTTTATGTTTTTGTCGAAAGGTACTGAAAAAAGATGGAATAGTAGAGGGTTGAATCATGAATAACATTTTTCTTTTAATTTTCTATGCCTCCCACTTCTTACTCCTTTTCCTTGCAAACGTTGAGGCAGAGGAGAACTTTTCCTTAAAAAAAGAGACTGAAGAATCTCTGGGTAATTAGGTCAGGCAGGGTTCTACCTATTTGGACCATGACAAGGATCTGTGTTATAGCTTTCAACTTACTGATATCATAATTTAAAACACTTGAAATAACAGATGATATCGATATCTATTATGATTATTGATTACAATTGATAAGAAATAATACTTAAATTGTAACTGGAAAAATAAAGGATTTTTATCATTGGTTATAAAAAAGAATTCACTTTGGTAATTGAAAACTCAAGAGCCTTGTTTTTCAATGGGTTTGAAGGTATGCAGTCAAAGTCTGAAACCAATAATCAGCACGGATCTGATCCAAATGGTGCTCCATCCACAAGTGTCTATTTTGAACCCTGGTGGCGTGGTATTGGATACAATCCTATTCCGTTACCTGCGGTAGGTGCAAATGCTTCCAGATCAACATCTCTTGAATTACCTAATGGTGGTTCAGAGTCAAATGATGGTCAGTCTGTGTCTAATAATGATGTAAACGATGAAGAGGATGATGTTTACAAAGAAGTGCAAGCTACTGGATCTCCACATTCTGGTACATCTTCATTCCATAACCATTTAAGCAAGCATTTCAGGTTTTCGGTTTTGTGCCTGACAATACTGAATCACATCTTCTTTGAAGGTGTTATTGTGAAATTGGAGGCTTGCTTTTACATTTTAACCCAAAAAAGTAACGAGTTTATAACGACTTTAGGAGTCAAAAGTTTATCCTGGCAGGATTGTTTCTGAAAACTATTTTAAGAACAAATATAGCAAGAAAGTGACCGTTTGTTGTTTTCAAATATTTGTGTTTTGATTGTTTTATCATAATGATAAAATACTATATCGTGATTTACTTCCATGACATTGTAAATTAATAAAAAGATGGCAACATAGAAATGTGCAAAATAAGTAAGCTGTCATATGGCTGTTTAACTCACAAATAACGAAATATTTGTATATGTATATGCATTGTTTTAAAAGGCGCGCCTAGGCTCAAGTCCCACCTTTTGCGCCTCGCCTGTCCCAGGCGAGGCGCGTGTAATAAGGCACACGCGCCTTATGTCGTCTTACGTGAAGCCCCAGGCGCCCAAAGGCGCACGTCTCGTGGGATTTTTAATTTTCCTTTGCGTTTTTTGTGTTTTAGATCCCCGTACTAGGTCATTCGAAGCGCGTGAAGGTTGATAGTTGAATGTTATGTATGTTTTATGTATTATTCTTGGTTGAAACTTCATTTATGACCATGAAAAGTGTTTTTATTGTGTATACACATATATATAATTTTTTTTGTTTTTTTATATAGTGCGCCTTGAGTAAAAAAAACCTCGCTTTTTGGTGCGCCTTGCGCCTCAGGCGCTAGAGGGCCATTGCGCCTTGTGCTTTTTAAAACACTGTGTATATGTATATATACACACACAAAAAAACCCACTGAATATGACCTAAGAGGTTAATAACAATTGCATATCCTAATTTCAGCTGGAAGTTACAGACTGGATGCTCAAAAGATGCAGCATGGGTCATCTACTTTGCCAGCTATGCACGGTGAATGTCTGGCGCAGGCTTCACAACTCGAACTTGTTGGTCACTCTATTGTAAGTTCCATTTCTGTCCAGTTTTAGAAAATGTTTTGTCTTGTTAGGACAATTTTAGTGCTTTTAGTCCCAGAATTAGAGATTTCATTAAATAATGGTCAAGTTATGATTGTATAATTATCTGACTGAAGAACTTGCCATTCTTTCTGTACTTTGGCAGGCATGTGCGTCAAATCCATACCAGGATCCATATTATGGAGGAATGATGGCTTTCTATGGCCATCAGCCCTTGGTATGTTACTAACTCAACTTCATAAAAACTAGAGAGTGGTTTCACTGTCATCTTCTTATTTCATTATTTGGCTGTTGTGCTAAACCACATAATGGAGTGATCTAGCAGCCCAGTAGGCCTTGGAGAACGAAGAGGTGGCGAATTCAATCCATGATGGTCACGAACCAAGGAATTAATTTACTATGAGTTTTCTTGACTTTTAAATGTTGTAGGGTCAGATGGGACCATGACATTAGTCGAGTTACGCGCAAGCTGACCCAAACAGTCATGAATATTAAAAAAAAAAAAAATTGCTGTGCTTCTGTAACATAGCAGCTGTGAAATCAAAATCCAAATGACACAAATTGGCTTTTGATCCTCTTAAGAAATGGAACTTCAAATCCCAGAGCAAAAGGGTCTTGCTCTCCACCATTAAAAATGGTTTTTGTGCCGCCAAACCTGTCAAATTCAATTTGTTTGTTATCATACATCATTAAAATTTTACTTTTGCTTCTGGGGGTATTTCCTTGAACATGAAATTTCACGTGATATTATACCAGATTGTTGGGGGTCAATGCTGACGATTTGAATTAGGACCTACATTTTACATTGTAATACTCTTCATACCAATGCCTCTGAATTTACAATTTTCATTCAAATTTAGTTACACCTGTAATTGGTCTGCAGGGGTTTATATTGTTTCTTCTTCAATCTTCATTTTTTTGTGTGTATTAAGCCAGAAGGAAAAGTTATTATGTGATAATTTCTTTTATCTAATATATAGCTTCAGAATACACCGAGAGCTGATGTTTTCATTGCACAAGTCTTTAATGACAAAATTCTCATGCTTTGAAGTAAACTGTAAATGCTTGTCATGGACAGGGCTATCCTATGGTCGGAGCGCCACATGCTCGAATGCCATTGCCCTTCGAGATAGCACAAGACCCAGTTTTCGTGAATGCGAAGCAGTACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAGGAAGTTGATAAAAGCCAGAAAGGTGGATTTGGATATTATTTATTATTATTCTTTTTATTTGGGGGGGGGGGGCTTTAATTGTCCTGCTGTGGTTCTATCTGCTATTGCTTATGGTTAAGCATGTTACAACCACTGAATTCATTGTATATACCCTTACGCACACTCACTTGGTCATGGTATACACAAAAGAATTCCAGATTTTTTTGGTTATGTTGCTCACATTTCTTATTGCAACAGCCATACCTTCATGAGTCTAGACACCAGCATGCCTTGAGAAGGATGAGGAGTACCGGAGGGCGTTTCGCCAAGAAAAACGAAGCTGATGGAAAGGAGATGCATTCTGATAAAGTAAACGAGACGAACAGGACCTCTGGGTAGCGACCCGTACCAGGCAGTGGAGGGGAAGGCCAAGACGACGGCCAAAGTGTTGGTATGGGGGATCGATCGCTTGGTTGTAGAAGTACGTACTGCATTCTTAGCAAGTGCTAGGCGGCAAATCATTCTTGGCTTGTTCTGTTGCTTTGAAAAAATAGAATGTGGAATGATATGTGACTTGCAGGATCTCATGGCTTCAAAGGATTTCTCTAAAGTCCGGATTTCTTCATTCCATTCTTTTTATTTTCTTTCATTTTTGTACAGAGTTCATGGTAACTTAAGGGAGTGGAAAGTTTGTCATCTTGTATTATATGGCAGAGTGAAACTAAATGAATCGTAAGGCTAGACAGTGATTCATAAAGATCACCCTTTACAGATTTTAGATTTTTATATCTAAGGTGGACAGATTATTGGTGCAAATTATAACAGGTGAACTAATGGGTGGGGTTTGTAAGTTTTCTTCTGTCAATTTAGAATTATTTTGGTTGTGGAGTACAAGAATTATTAACAGTCCAAGTAAAGAAGAAAAATAGGTGTGTAGTGTTTGGAG

mRNA sequence

CTCAAACTTCAAACAAAGTCTTCTCACTCTGAATTTTTTCTTTTGGAATTCACAGTTTTTTCAATCCTCCCTCAAATGGATTCAATTTCAATCTTTTGAAACAATTATCTGTGATTTCTCTTCGCCCCCATCAGATTTCCCCCCTTTTTTTTCCATTGGAACGGTGCTCCAATTTCTTCCGGTATGCAGTCAAAGTCTGAAACCAATAATCAGCACGGATCTGATCCAAATGGTGCTCCATCCACAAGTGTCTATTTTGAACCCTGGTGGCGTGGTATTGGATACAATCCTATTCCGTTACCTGCGGTAGGTGCAAATGCTTCCAGATCAACATCTCTTGAATTACCTAATGGTGGTTCAGAGTCAAATGATGGTCAGTCTGTGTCTAATAATGATGTAAACGATGAAGAGGATGATGTTTACAAAGAAGTGCAAGCTACTGGATCTCCACATTCTGCTGGAAGTTACAGACTGGATGCTCAAAAGATGCAGCATGGGTCATCTACTTTGCCAGCTATGCACGGTGAATGTCTGGCGCAGGCTTCACAACTCGAACTTGTTGGTCACTCTATTGCATGTGCGTCAAATCCATACCAGGATCCATATTATGGAGGAATGATGGCTTTCTATGGCCATCAGCCCTTGGGCTATCCTATGGTCGGAGCGCCACATGCTCGAATGCCATTGCCCTTCGAGATAGCACAAGACCCAGTTTTCGTGAATGCGAAGCAGTACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAGGAAGTTGATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACACCAGCATGCCTTGAGAAGGATGAGGAGTACCGGAGGGCGTTTCGCCAAGAAAAACGAAGCTGATGGAAAGGAGATGCATTCTGATAAAGTAAACGAGACGAACAGGACCTCTGGGTAGCGACCCGTACCAGGCAGTGGAGGGGAAGGCCAAGACGACGGCCAAAGTGTTGGTATGGGGGATCGATCGCTTGGTTGTAGAAGTACGTACTGCATTCTTAGCAAGTGCTAGGCGGCAAATCATTCTTGGCTTGTTCTGTTGCTTTGAAAAAATAGAATGTGGAATGATATGTGACTTGCAGGATCTCATGGCTTCAAAGGATTTCTCTAAAGTCCGGATTTCTTCATTCCATTCTTTTTATTTTCTTTCATTTTTGTACAGAGTTCATGGTAACTTAAGGGAGTGGAAAGTTTGTCATCTTGTATTATATGGCAGAGTGAAACTAAATGAATCGTAAGGCTAGACAGTGATTCATAAAGATCACCCTTTACAGATTTTAGATTTTTATATCTAAGGTGGACAGATTATTGGTGCAAATTATAACAGGTGAACTAATGGGTGGGGTTTGTAAGTTTTCTTCTGTCAATTTAGAATTATTTTGGTTGTGGAGTACAAGAATTATTAACAGTCCAAGTAAAGAAGAAAAATAGGTGTGTAGTGTTTGGAG

Coding sequence (CDS)

ATGCAGTCAAAGTCTGAAACCAATAATCAGCACGGATCTGATCCAAATGGTGCTCCATCCACAAGTGTCTATTTTGAACCCTGGTGGCGTGGTATTGGATACAATCCTATTCCGTTACCTGCGGTAGGTGCAAATGCTTCCAGATCAACATCTCTTGAATTACCTAATGGTGGTTCAGAGTCAAATGATGGTCAGTCTGTGTCTAATAATGATGTAAACGATGAAGAGGATGATGTTTACAAAGAAGTGCAAGCTACTGGATCTCCACATTCTGCTGGAAGTTACAGACTGGATGCTCAAAAGATGCAGCATGGGTCATCTACTTTGCCAGCTATGCACGGTGAATGTCTGGCGCAGGCTTCACAACTCGAACTTGTTGGTCACTCTATTGCATGTGCGTCAAATCCATACCAGGATCCATATTATGGAGGAATGATGGCTTTCTATGGCCATCAGCCCTTGGGCTATCCTATGGTCGGAGCGCCACATGCTCGAATGCCATTGCCCTTCGAGATAGCACAAGACCCAGTTTTCGTGAATGCGAAGCAGTACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAGGAAGTTGATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACACCAGCATGCCTTGAGAAGGATGAGGAGTACCGGAGGGCGTTTCGCCAAGAAAAACGAAGCTGATGGAAAGGAGATGCATTCTGATAAAGTAAACGAGACGAACAGGACCTCTGGGTAG

Protein sequence

MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQKMQHGSSTLPAMHGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNETNRTSG

Homology

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BLAST of Sed0015811 vs. NCBI nr
Match: XP_022154358.1 (nuclear transcription factor Y subunit A-1-like [Momordica charantia])

HSP 1 Score: 443.0 bits (1138), Expect = 1.8e-120
Identity = 221/249 (88.76%), Postives = 232/249 (93.17%), Query Frame = 0


Query: 1   MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSE 60
           MQSKSETNNQ  SDPNGAPSTS+Y+EPWWRGIGYNPIPLP VG N S STSLE PNGGSE
Sbjct: 1   MQSKSETNNQLESDPNGAPSTSLYYEPWWRGIGYNPIPLPVVGGNVSSSTSLEFPNGGSE 60

Query: 61  SNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQKMQHGSSTLPAMHGECLAQA 120
           SNDGQSVSNND+NDEEDDV KEVQATGSPHSAGSYRLDAQKMQH SSTLPAMHGEC  Q+
Sbjct: 61  SNDGQSVSNNDLNDEEDDVTKEVQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECPTQS 120

Query: 121 SQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVN 180
           +QLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLP EIAQDPVFVN
Sbjct: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVN 180

Query: 181 AKQYQGILRRRQARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKE 240
           AKQYQGILRRRQARAKAEAE+KLIKARKPYLHESRHQHA+RR R +GGRFAKK+EA+  E
Sbjct: 181 AKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKDEANENE 240

Query: 241 MHSDKVNET 250
           MHSDK NE+
Sbjct: 241 MHSDKANES 249

[Close]

BLAST of Sed0015811 vs. NCBI nr
Match: XP_004139033.1 (nuclear transcription factor Y subunit A-1 [Cucumis sativus] >XP_031735950.1 nuclear transcription factor Y subunit A-1 [Cucumis sativus] >KGN66486.1 hypothetical protein Csa_007630 [Cucumis sativus])

HSP 1 Score: 434.9 bits (1117), Expect = 4.8e-118
Identity = 219/250 (87.60%), Postives = 231/250 (92.40%), Query Frame = 0


Query: 1   MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSE 60
           MQSKSETNNQ   D NGAPSTS+Y+EPWWRG+GYN  PLP VG NAS STSLE PNGGSE
Sbjct: 1   MQSKSETNNQ--LDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSE 60

Query: 61  SNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQKMQHGSSTLPAMHGECLAQA 120
           SNDGQSVSNNDVNDEEDDV KEVQATGSPHSAGSYR D QKMQH SSTLPAMHGECLAQ+
Sbjct: 61  SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQS 120

Query: 121 SQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVN 180
           +QLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLP EIAQDPVFVN
Sbjct: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVN 180

Query: 181 AKQYQGILRRRQARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKE 240
           AKQYQGILRRRQARAKAEAE+K IKARKPYLHESRHQHA+RR RS+GGRFAKK+EA+GKE
Sbjct: 181 AKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKE 240

Query: 241 MHSDKVNETN 251
            HSDKVNE++
Sbjct: 241 KHSDKVNESD 248

[Close]

BLAST of Sed0015811 vs. NCBI nr
Match: XP_008450423.1 (PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo] >XP_008450424.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo] >KAA0056302.1 nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo var. makuwa] >TYK18850.1 nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 434.9 bits (1117), Expect = 4.8e-118
Identity = 218/249 (87.55%), Postives = 230/249 (92.37%), Query Frame = 0


Query: 1   MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSE 60
           MQSKSETNNQ   DPNGAPSTS+Y+EPWWRG+GYN  PLP VG NAS STSLE PNGGSE
Sbjct: 1   MQSKSETNNQ--LDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSE 60

Query: 61  SNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQKMQHGSSTLPAMHGECLAQA 120
           SNDGQSVSNNDVNDEEDDV KEVQATGSPHSAGSYR D +KMQH SSTLPAMHGECL Q+
Sbjct: 61  SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQS 120

Query: 121 SQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVN 180
           +QLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLP EIAQDPVFVN
Sbjct: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVN 180

Query: 181 AKQYQGILRRRQARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKE 240
           AKQYQGILRRRQARAKAEAE+K IKARKPYLHESRHQHA+RR RS+GGRFAKK+EADGKE
Sbjct: 181 AKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKE 240

Query: 241 MHSDKVNET 250
            HSDKV+E+
Sbjct: 241 KHSDKVSES 247

[Close]

BLAST of Sed0015811 vs. NCBI nr
Match: XP_008450422.1 (PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo])

HSP 1 Score: 434.9 bits (1117), Expect = 4.8e-118
Identity = 218/249 (87.55%), Postives = 230/249 (92.37%), Query Frame = 0


Query: 1   MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSE 60
           MQSKSETNNQ   DPNGAPSTS+Y+EPWWRG+GYN  PLP VG NAS STSLE PNGGSE
Sbjct: 22  MQSKSETNNQ--LDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSE 81

Query: 61  SNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQKMQHGSSTLPAMHGECLAQA 120
           SNDGQSVSNNDVNDEEDDV KEVQATGSPHSAGSYR D +KMQH SSTLPAMHGECL Q+
Sbjct: 82  SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQS 141

Query: 121 SQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVN 180
           +QLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLP EIAQDPVFVN
Sbjct: 142 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVN 201

Query: 181 AKQYQGILRRRQARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKE 240
           AKQYQGILRRRQARAKAEAE+K IKARKPYLHESRHQHA+RR RS+GGRFAKK+EADGKE
Sbjct: 202 AKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKE 261

Query: 241 MHSDKVNET 250
            HSDKV+E+
Sbjct: 262 KHSDKVSES 268

[Close]

BLAST of Sed0015811 vs. NCBI nr
Match: XP_038879324.1 (nuclear transcription factor Y subunit A-1-like [Benincasa hispida])

HSP 1 Score: 428.3 bits (1100), Expect = 4.5e-116
Identity = 218/249 (87.55%), Postives = 227/249 (91.16%), Query Frame = 0


Query: 1   MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSE 60
           MQSKSETNNQ   DPNGAPSTS+Y+EPWWRG+GYN  PLP VG NAS STSLE PNGGSE
Sbjct: 1   MQSKSETNNQ--LDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSE 60

Query: 61  SNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQKMQHGSSTLPAMHGECLAQA 120
           SNDGQSVSNNDVNDEEDDV KEVQATGSPHSAGSYR DAQKMQH SSTLPAMHGECL Q+
Sbjct: 61  SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLTQS 120

Query: 121 SQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVN 180
           +QLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLP EIAQDPVFVN
Sbjct: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVN 180

Query: 181 AKQYQGILRRRQARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKE 240
           AKQYQGILRRRQARAKAEAE+K IKARKPYLHESRHQHA+RR RS+GGRFAKKNE DGK 
Sbjct: 181 AKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEVDGK- 240

Query: 241 MHSDKVNET 250
              DKVNE+
Sbjct: 241 ---DKVNES 243

[Close]

BLAST of Sed0015811 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.1e-51
Identity = 117/241 (48.55%), Postives = 155/241 (64.32%), Query Frame = 0


Query: 2   QSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSES 61
           +++ E NN H           +Y EPWW+   +  +P        S S+SL+ PN GSES
Sbjct: 8   ENEEEVNNHH-----AVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GSES 67

Query: 62  NDGQSVSNND-VNDEEDDVYKEVQATGSPHSAGSYRLDAQKMQHGSSTLPAMHGECLAQA 121
           ND  S S +  +N E D  +K+ QA  S  S  ++ ++       + ++  MH + L Q 
Sbjct: 68  NDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEG---NDPALSIRNMHDQPLVQP 127

Query: 122 SQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPFEIAQDPVFV 181
              ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP ++AQ+PV+V
Sbjct: 128 P--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYV 187

Query: 182 NAKQYQGILRRRQARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGK 241
           NAKQY+GILRRR+ARAKAE ERK+I+ RKPYLHESRH+HA+RR R++GGRFAKK+E +  
Sbjct: 188 NAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAG 237

[Close]

BLAST of Sed0015811 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.9e-48
Identity = 126/250 (50.40%), Postives = 155/250 (62.00%), Query Frame = 0


Query: 1   MQSKSET-NNQHGSDPNGAPSTSV-YFEPWWR-GIGYNPIPLPAVGANASRSTSLELPNG 60
           M SKS++  N+  S+ +G  S+S+    PW R     N       G  +S+S +L L   
Sbjct: 6   MHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIALAL--- 65

Query: 61  GSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQKMQHGSSTLPAMHGECL 120
             ESN  +S SN D     + V KE Q T SP SAG Y    Q+  H   T P  H    
Sbjct: 66  --ESNGSKSPSNRD-----NTVNKESQVTTSPQSAGDYSDKNQESLHHGITQPPPHP--- 125

Query: 121 AQASQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPFEIAQD 180
                 +LVGH++  A SNPYQDPYY G+M  YGH PLG+ P  G PH+RMPLP E+AQ+
Sbjct: 126 ------QLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQE 185

Query: 181 PVFVNAKQYQGILRRRQARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNE 240
           PVFVNAKQYQ ILRRRQARAKAE E+KLIK+RKPYLHESRHQHA+RR R TGGRFAKK  
Sbjct: 186 PVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTN 236

Query: 241 ADGKEMHSDK 246
            +  +  +++
Sbjct: 246 TEASKRKAEE 236

[Close]

BLAST of Sed0015811 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.3e-22
Identity = 67/150 (44.67%), Postives = 85/150 (56.67%), Query Frame = 0


Query: 99  AQKMQHGSSTLPAM-HGECLAQASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYP 158
           A+K +  S T P +  G          +    +A    PY DPYY  + A   + P  YP
Sbjct: 16  AKKERPDSQTRPQVPSGRSSESIDTNSVYSEPMAHGLYPYPDPYYRSVFAQQAYLPHPYP 75

Query: 159 -----MVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAERKLIKARKPYLH 218
                ++G     +PL  +  ++PVFVNAKQY GILRRRQ+RAK EA  + IKA+KPY+H
Sbjct: 76  GVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMH 135

Query: 219 ESRHQHALRRMRSTGGRF--AKKNEADGKE 241
           ESRH HA+RR R  GGRF  AKK   D KE
Sbjct: 136 ESRHLHAIRRPRGCGGRFLNAKKENGDHKE 165

[Close]

BLAST of Sed0015811 vs. ExPASy Swiss-Prot
Match: Q93ZH2 (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NFYA3 PE=2 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-21
Identity = 63/123 (51.22%), Postives = 80/123 (65.04%), Query Frame = 0


Query: 137 YQDPYYGGMMA--FYGHQPLGYP-MVGAPHARMPLPFEIAQ-DPVFVNAKQYQGILRRRQ 196
           Y DP+YGG++A  +    P   P MV     R+PLP E+ + DPVFVNAKQY  I+RRRQ
Sbjct: 137 YADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVFVNAKQYHAIMRRRQ 196

Query: 197 ARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRF-------AKKNEADGKEMHSDK 249
            RAK EA+ KLI+ARKPYLHESRH HAL+R R +GGRF        +  +A  +E   DK
Sbjct: 197 QRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKLLQESEQAAAREQEQDK 256

[Close]

BLAST of Sed0015811 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.5e-21
Identity = 67/167 (40.12%), Postives = 94/167 (56.29%), Query Frame = 0


Query: 93  GSYRLDAQKMQHGSSTLP-AMHGECLAQASQLELVG--HSIACASNPYQDPYYGGMMAFY 152
           GS+    Q+  H    +P A + E +  +      G  +S+A    PY DPYY  + A  
Sbjct: 13  GSHEKQEQRDSHFQPPIPSARNYESIVTSLVYSDPGTTNSMAPGQYPYPDPYYRSIFAPP 72

Query: 153 GHQPLG--YPMVGAPHARMPLPFEIAQDPVFVNAKQYQGILRRRQARAKAEAERKLIKAR 212
                G    ++G     +PLP +  ++PVFVNAKQY GILRRRQ+RA+ E++ K+IK+R
Sbjct: 73  PQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKVIKSR 132

Query: 213 KPYLHESRHQHALRRMRSTGGRFAKKNEADGKEMHSDKVNETNRTSG 255
           KPYLHESRH HA+RR R  GGRF    + D     S    ++N ++G
Sbjct: 133 KPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHEDSSHEEKSNLSAG 179

[Close]

BLAST of Sed0015811 vs. ExPASy TrEMBL
Match: A0A6J1DK42 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111021642 PE=3 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 8.6e-121
Identity = 221/249 (88.76%), Postives = 232/249 (93.17%), Query Frame = 0


Query: 1   MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSE 60
           MQSKSETNNQ  SDPNGAPSTS+Y+EPWWRGIGYNPIPLP VG N S STSLE PNGGSE
Sbjct: 1   MQSKSETNNQLESDPNGAPSTSLYYEPWWRGIGYNPIPLPVVGGNVSSSTSLEFPNGGSE 60

Query: 61  SNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQKMQHGSSTLPAMHGECLAQA 120
           SNDGQSVSNND+NDEEDDV KEVQATGSPHSAGSYRLDAQKMQH SSTLPAMHGEC  Q+
Sbjct: 61  SNDGQSVSNNDLNDEEDDVTKEVQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECPTQS 120

Query: 121 SQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVN 180
           +QLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLP EIAQDPVFVN
Sbjct: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVN 180

Query: 181 AKQYQGILRRRQARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKE 240
           AKQYQGILRRRQARAKAEAE+KLIKARKPYLHESRHQHA+RR R +GGRFAKK+EA+  E
Sbjct: 181 AKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKDEANENE 240

Query: 241 MHSDKVNET 250
           MHSDK NE+
Sbjct: 241 MHSDKANES 249

[Close]

BLAST of Sed0015811 vs. ExPASy TrEMBL
Match: A0A1S3BPV3 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103492032 PE=3 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.3e-118
Identity = 218/249 (87.55%), Postives = 230/249 (92.37%), Query Frame = 0


Query: 1   MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSE 60
           MQSKSETNNQ   DPNGAPSTS+Y+EPWWRG+GYN  PLP VG NAS STSLE PNGGSE
Sbjct: 1   MQSKSETNNQ--LDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSE 60

Query: 61  SNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQKMQHGSSTLPAMHGECLAQA 120
           SNDGQSVSNNDVNDEEDDV KEVQATGSPHSAGSYR D +KMQH SSTLPAMHGECL Q+
Sbjct: 61  SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQS 120

Query: 121 SQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVN 180
           +QLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLP EIAQDPVFVN
Sbjct: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVN 180

Query: 181 AKQYQGILRRRQARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKE 240
           AKQYQGILRRRQARAKAEAE+K IKARKPYLHESRHQHA+RR RS+GGRFAKK+EADGKE
Sbjct: 181 AKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKE 240

Query: 241 MHSDKVNET 250
            HSDKV+E+
Sbjct: 241 KHSDKVSES 247

[Close]

BLAST of Sed0015811 vs. ExPASy TrEMBL
Match: A0A5D3D5Q2 (Nuclear transcription factor Y subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00430 PE=3 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.3e-118
Identity = 218/249 (87.55%), Postives = 230/249 (92.37%), Query Frame = 0


Query: 1   MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSE 60
           MQSKSETNNQ   DPNGAPSTS+Y+EPWWRG+GYN  PLP VG NAS STSLE PNGGSE
Sbjct: 1   MQSKSETNNQ--LDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSE 60

Query: 61  SNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQKMQHGSSTLPAMHGECLAQA 120
           SNDGQSVSNNDVNDEEDDV KEVQATGSPHSAGSYR D +KMQH SSTLPAMHGECL Q+
Sbjct: 61  SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQS 120

Query: 121 SQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVN 180
           +QLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLP EIAQDPVFVN
Sbjct: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVN 180

Query: 181 AKQYQGILRRRQARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKE 240
           AKQYQGILRRRQARAKAEAE+K IKARKPYLHESRHQHA+RR RS+GGRFAKK+EADGKE
Sbjct: 181 AKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKE 240

Query: 241 MHSDKVNET 250
            HSDKV+E+
Sbjct: 241 KHSDKVSES 247

[Close]

BLAST of Sed0015811 vs. ExPASy TrEMBL
Match: A0A0A0M2S3 (Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_1G613580 PE=3 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.3e-118
Identity = 219/250 (87.60%), Postives = 231/250 (92.40%), Query Frame = 0


Query: 1   MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSE 60
           MQSKSETNNQ   D NGAPSTS+Y+EPWWRG+GYN  PLP VG NAS STSLE PNGGSE
Sbjct: 1   MQSKSETNNQ--LDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSE 60

Query: 61  SNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQKMQHGSSTLPAMHGECLAQA 120
           SNDGQSVSNNDVNDEEDDV KEVQATGSPHSAGSYR D QKMQH SSTLPAMHGECLAQ+
Sbjct: 61  SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQS 120

Query: 121 SQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVN 180
           +QLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLP EIAQDPVFVN
Sbjct: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVN 180

Query: 181 AKQYQGILRRRQARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKE 240
           AKQYQGILRRRQARAKAEAE+K IKARKPYLHESRHQHA+RR RS+GGRFAKK+EA+GKE
Sbjct: 181 AKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKE 240

Query: 241 MHSDKVNETN 251
            HSDKVNE++
Sbjct: 241 KHSDKVNESD 248

[Close]

BLAST of Sed0015811 vs. ExPASy TrEMBL
Match: A0A1S3BP85 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103492032 PE=3 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.3e-118
Identity = 218/249 (87.55%), Postives = 230/249 (92.37%), Query Frame = 0


Query: 1   MQSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSE 60
           MQSKSETNNQ   DPNGAPSTS+Y+EPWWRG+GYN  PLP VG NAS STSLE PNGGSE
Sbjct: 22  MQSKSETNNQ--LDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSE 81

Query: 61  SNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQKMQHGSSTLPAMHGECLAQA 120
           SNDGQSVSNNDVNDEEDDV KEVQATGSPHSAGSYR D +KMQH SSTLPAMHGECL Q+
Sbjct: 82  SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQS 141

Query: 121 SQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPFEIAQDPVFVN 180
           +QLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLP EIAQDPVFVN
Sbjct: 142 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVN 201

Query: 181 AKQYQGILRRRQARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGKE 240
           AKQYQGILRRRQARAKAEAE+K IKARKPYLHESRHQHA+RR RS+GGRFAKK+EADGKE
Sbjct: 202 AKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKE 261

Query: 241 MHSDKVNET 250
            HSDKV+E+
Sbjct: 262 KHSDKVSES 268

[Close]

BLAST of Sed0015811 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 203.4 bits (516), Expect = 2.2e-52
Identity = 117/241 (48.55%), Postives = 155/241 (64.32%), Query Frame = 0


Query: 2   QSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSES 61
           +++ E NN H           +Y EPWW+   +  +P        S S+SL+ PN GSES
Sbjct: 8   ENEEEVNNHH-----AVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GSES 67

Query: 62  NDGQSVSNND-VNDEEDDVYKEVQATGSPHSAGSYRLDAQKMQHGSSTLPAMHGECLAQA 121
           ND  S S +  +N E D  +K+ QA  S  S  ++ ++       + ++  MH + L Q 
Sbjct: 68  NDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEG---NDPALSIRNMHDQPLVQP 127

Query: 122 SQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPFEIAQDPVFV 181
              ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP ++AQ+PV+V
Sbjct: 128 P--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYV 187

Query: 182 NAKQYQGILRRRQARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGK 241
           NAKQY+GILRRR+ARAKAE ERK+I+ RKPYLHESRH+HA+RR R++GGRFAKK+E +  
Sbjct: 188 NAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAG 237

[Close]

BLAST of Sed0015811 vs. TAIR 10
Match: AT5G12840.3 (nuclear factor Y, subunit A1 )

HSP 1 Score: 203.4 bits (516), Expect = 2.2e-52
Identity = 117/241 (48.55%), Postives = 155/241 (64.32%), Query Frame = 0


Query: 2   QSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSES 61
           +++ E NN H           +Y EPWW+   +  +P        S S+SL+ PN GSES
Sbjct: 8   ENEEEVNNHH-----AVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GSES 67

Query: 62  NDGQSVSNND-VNDEEDDVYKEVQATGSPHSAGSYRLDAQKMQHGSSTLPAMHGECLAQA 121
           ND  S S +  +N E D  +K+ QA  S  S  ++ ++       + ++  MH + L Q 
Sbjct: 68  NDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEG---NDPALSIRNMHDQPLVQP 127

Query: 122 SQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPFEIAQDPVFV 181
              ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP ++AQ+PV+V
Sbjct: 128 P--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYV 187

Query: 182 NAKQYQGILRRRQARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEADGK 241
           NAKQY+GILRRR+ARAKAE ERK+I+ RKPYLHESRH+HA+RR R++GGRFAKK+E +  
Sbjct: 188 NAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAG 237

[Close]

BLAST of Sed0015811 vs. TAIR 10
Match: AT5G12840.2 (nuclear factor Y, subunit A1 )

HSP 1 Score: 201.8 bits (512), Expect = 6.4e-52
Identity = 121/243 (49.79%), Postives = 153/243 (62.96%), Query Frame = 0


Query: 2   QSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSES 61
           +++ E NN H           +Y EPWW+   +  +P        S S+SL+ PN GSES
Sbjct: 8   ENEEEVNNHH-----AVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GSES 67

Query: 62  NDGQSVSNND-VNDEEDDVYKEVQATGSPHSAGSYRLDAQKMQHGSSTLPA--MHGECLA 121
           ND  S S +  +N E D  +K+ QA      A S R D   M+     L    MH + L 
Sbjct: 68  NDVHSASEDGALNGENDGTWKDSQA------ATSSRSDNHGMEGNDPALSIRNMHDQPLV 127

Query: 122 QASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPFEIAQDPV 181
           Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP ++AQ+PV
Sbjct: 128 QPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPV 187

Query: 182 FVNAKQYQGILRRRQARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEAD 241
           +VNAKQY+GILRRR+ARAKAE ERK+I+ RKPYLHESRH+HA+RR R++GGRFAKK+E +
Sbjct: 188 YVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVE 236

[Close]

BLAST of Sed0015811 vs. TAIR 10
Match: AT5G12840.4 (nuclear factor Y, subunit A1 )

HSP 1 Score: 201.8 bits (512), Expect = 6.4e-52
Identity = 121/243 (49.79%), Postives = 153/243 (62.96%), Query Frame = 0


Query: 2   QSKSETNNQHGSDPNGAPSTSVYFEPWWRGIGYNPIPLPAVGANASRSTSLELPNGGSES 61
           +++ E NN H           +Y EPWW+   +  +P        S S+SL+ PN GSES
Sbjct: 8   ENEEEVNNHH-----AVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GSES 67

Query: 62  NDGQSVSNND-VNDEEDDVYKEVQATGSPHSAGSYRLDAQKMQHGSSTLPA--MHGECLA 121
           ND  S S +  +N E D  +K+ QA      A S R D   M+     L    MH + L 
Sbjct: 68  NDVHSASEDGALNGENDGTWKDSQA------ATSSRSDNHGMEGNDPALSIRNMHDQPLV 127

Query: 122 QASQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPFEIAQDPV 181
           Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP ++AQ+PV
Sbjct: 128 QPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPV 187

Query: 182 FVNAKQYQGILRRRQARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNEAD 241
           +VNAKQY+GILRRR+ARAKAE ERK+I+ RKPYLHESRH+HA+RR R++GGRFAKK+E +
Sbjct: 188 YVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVE 236

[Close]

BLAST of Sed0015811 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 194.1 bits (492), Expect = 1.3e-49
Identity = 126/250 (50.40%), Postives = 155/250 (62.00%), Query Frame = 0


Query: 1   MQSKSET-NNQHGSDPNGAPSTSV-YFEPWWR-GIGYNPIPLPAVGANASRSTSLELPNG 60
           M SKS++  N+  S+ +G  S+S+    PW R     N       G  +S+S +L L   
Sbjct: 6   MHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIALAL--- 65

Query: 61  GSESNDGQSVSNNDVNDEEDDVYKEVQATGSPHSAGSYRLDAQKMQHGSSTLPAMHGECL 120
             ESN  +S SN D     + V KE Q T SP SAG Y    Q+  H   T P  H    
Sbjct: 66  --ESNGSKSPSNRD-----NTVNKESQVTTSPQSAGDYSDKNQESLHHGITQPPPHP--- 125

Query: 121 AQASQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPFEIAQD 180
                 +LVGH++  A SNPYQDPYY G+M  YGH PLG+ P  G PH+RMPLP E+AQ+
Sbjct: 126 ------QLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQE 185

Query: 181 PVFVNAKQYQGILRRRQARAKAEAERKLIKARKPYLHESRHQHALRRMRSTGGRFAKKNE 240
           PVFVNAKQYQ ILRRRQARAKAE E+KLIK+RKPYLHESRHQHA+RR R TGGRFAKK  
Sbjct: 186 PVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTN 236

Query: 241 ADGKEMHSDK 246
            +  +  +++
Sbjct: 246 TEASKRKAEE 236

The following BLAST results are available for this feature:

BLAST of Sed0015811 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154358.1	1.8e-120	88.76	nuclear transcription factor Y subunit A-1-like [Momordica charantia]	[more]
XP_004139033.1	4.8e-118	87.60	nuclear transcription factor Y subunit A-1 [Cucumis sativus] >XP_031735950.1 nuc...	[more]
XP_008450423.1	4.8e-118	87.55	PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis m...	[more]
XP_008450422.1	4.8e-118	87.55	PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis m...	[more]
XP_038879324.1	4.5e-116	87.55	nuclear transcription factor Y subunit A-1-like [Benincasa hispida]	[more]

BLAST of Sed0015811 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXV5	3.1e-51	48.55	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q945M9	1.9e-48	50.40	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	2.3e-22	44.67	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q93ZH2	1.2e-21	51.22	Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84JP1	1.5e-21	40.12	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Sed0015811 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DK42	8.6e-121	88.76	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A1S3BPV3	2.3e-118	87.55	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103492032 P...	[more]
A0A5D3D5Q2	2.3e-118	87.55	Nuclear transcription factor Y subunit OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0M2S3	2.3e-118	87.60	Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_1G61358...	[more]
A0A1S3BP85	2.3e-118	87.55	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103492032 P...	[more]

BLAST of Sed0015811 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12840.1	2.2e-52	48.55	nuclear factor Y, subunit A1	[more]
AT5G12840.3	2.2e-52	48.55	nuclear factor Y, subunit A1	[more]
AT5G12840.2	6.4e-52	49.79	nuclear factor Y, subunit A1	[more]
AT5G12840.4	6.4e-52	49.79	nuclear factor Y, subunit A1	[more]
AT3G20910.1	1.3e-49	50.40	nuclear factor Y, subunit A9	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 176..198 score: 74.15 coord: 207..230 score: 74.77
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 172..233 e-value: 5.6E-34 score: 128.9
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 176..230 e-value: 3.0E-25 score: 88.6
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 33..243
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 173..233 score: 35.104836
None	No IPR available	GENE3D	6.10.250.2430		coord: 173..235 e-value: 2.2E-28 score: 100.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR12632:SF59	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9	coord: 33..243
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 178..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015811.1	Sed0015811.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity