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Sed0015800 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTCTAAAAAAGAAGGTTTTTTAGGGGTAGTTTTCGTAAATGGAGACAATGAAAAAGGGCAAAAAAGGAACAGAAAAAAAAGAAGCGCAAGAGAGCTTATCTTCATCTTCAATGGCATGCTGAGCTTTCTTCATCCAACAAAAAGCGCTGTGACTGAACAAAACCACACACAGACTCCGCAAAGATGATAAACCTTTCAATTTCATCGCCTTCGAGCATTTCTCTCCCTCCAAAAATTCTCAGCTCCACCTCCAAATCCTCCTTCAATGGCGCTCAAATCCGTTTCCCGTTATCGTTTCGCGTTCCCCCAAAAACGGCATGCACCGGCGGCCGCAATTCGTCGGCGGTAATGATGGCGAAGAAGGATGAGGAATTGAAGAAAATCAGAGCGAAGAGCACTGAGGAAATCAACGAAGAGGTCGTCGATCTTAAGGGCGAGCTTCTTATGCTTCGGCTTCAGAAATCGGCTCGCAATGAGTTCAAGTCCAGCGAATTCCGCCGTATGCGTAAACGGGTAATCCTTTTCTCTTATCGATTCAGATTCTTAGTTGATTTAGCGTTCGATTCCGTTTCCTATCATCCACATTTTTGCTTATTTTGTGCTGAATTTGCTGGTAGGGTTGAATGTTGGGGCTCAGTCGCTTTTAATGGGGTTTTGTAGCTGTTGGAATCTAAGGTTCTTGGGTTTTGTTTACCCTAAGCAAATTGGCAATAAATTTGAAAAGTAAACAAAACTTCTCAAACCATACATTAGGAATCCATTTGGGATTTAAATTTTAGTTCACAATCCACAAAAATTAACAAAACTACATTTAACCATGTTGAGACGATGAGGACGGCAACCCTGACTTCACATTGTTCACTTTGGGCATAACCCTTATGCCTTTTGTCTTTTTGGCATTAGTGAGATGTTTTTCATCACTTATATACCCATAATCTTGTCCCTATCTAACCAATGTGCAACAATTTTTTTTGTATCCTAACAATCTTCCCCTCGAACAAAGATCGAACATCCCCTCAAATAGTTAATCCGTCTAGGTGATATTAAGATCAACTCTGCTTTTCCTGAGAGTTTGCTGCCAATTCGATAGAATGAATTTTTGCCATTATTATGTCTCTAGGCTCCTAACTTATTTGTAATACATTGGAAAATTCTACCAACATGATTAAATTGAGGGTATGGCTCTGACAACACTCGTTAAGGACGATAACCCTGAGCTAATTTCCACTTTAGTATTATATTTTTCCCTTTGGGCATAACCCTCGTGGTTTAGTTTTTTGTTTCATCCTAAAGGTCTTACGCTTATGGAGATGGTTGTGGTCACTTAAATATCCAAGATGTTCCTCTTGTCTAACCAATATCTCAACAAAAGCTTCATTCGAAGGAAGATAGAGAAACCCAATGCAAGCAAGGAGCCCTTAAACTTCAAAAACCCAAGTAGAATCAGGAATTGAATTAGGATTTCTATGCAATAAAAGCTTCAAATTAAACCAAGTTTAACACCAAATGAAGAAATAGCTCTCTTATGGATTATAGGTTAAAGATGTGTTTAGCACTATCTTCTATGAACTCTTCAACTATACATGGTAGCCACCTATTTAGGAATAAACTTTTTACGGGTTTACTTGACATCCAAATGTTGTAGGGTCAAACGATATGTCCCGTGAAAATAGACAAGATGTGTGATAGCTAGCCCAGACACTCACTTAACATCCAGATGTTGTAGGGTCAAGCAGTGTGTCCTGTGAAATTAGTTGAGATGCGCTAGCTGGCTCAGACATTTATGAATCACGAAAAATTAAAAAAAAAAGAAAAAGAAAAAAACTCCAATGCCTTCACACTAACCATTTTGTTTTAGATTCCGAAAATGCATGAAGCATGAGTGAGCTTTCTCCGCTATTCCATGATTTTAGCTATGGTACCCTTTTGAATAGTTGAAAATCCCTAATGCAATCTCATATGGGACCCTATATTGCAATTTCATATATTAATGAAATTATTTCTTATCCAAAAAAAGAAAAGAAAATAGATTGAGCTTCAATTTGGGTTTATAGGAACTTATCTGTTTATATGAAGTTAGTTATTTGGGAAGCTAAACCTAGTTTGATCATGAATGAAGCATGTTTAATGTACAAGGGTGGTGCTTTTGAATTTGATCCACCTTTAGGTTTCTCATGACTTTTCTACCAAAACTTACTTCATATTTAGTGCATAATGTGCATAATGTTACAAGTCCTGAATGGCTGAATCATAAAAAGAAATTGAACAGAAAATGTTTATTTAAACATGATGAATTTAGTAAAACTAGCATTTTTTTTTTTGGAATTCACTTATGATCATGATGGAGGGACATTAAGCACTGCAATATGTGCTTGTTCTCGTGGTAAGACTTGGGCATTCTCATAGTCGTATCACCCATGGCAGATTGCTCGGATGCTAACTGTAAAACGCGAACGAGAGATCGAAGAGGGAGTGGGGAAAAGGCTGTCAAGAAAGCTAGACAGGAAGTGGAAGAAGAGTATTGTGGTCAGACCACCTCCATCTTTGAAGAAGTTGCGAGAGGAAGAAGCAGCAGCTGAAGCAGCTGAGAAATCTGCTTGATCCAACCAGATATGTTTTCAAACATAATTGTAGCTTTATGAGTTGTTCTTTTCTTAAAAAAAAAACTAAAAAAAAGAGTATGAAGTTGTTGAGAATGCTATTTAAACAACGTTCTAGATTTTTTGTTTTTATTTTTCCTGAAAAAATCTGATAAATTGGAAATAGATTTTGAGGGGATCATGTTGAATTCTTATTCTTTCATGTCTACGCCTTTTATCTGAGATAAACCAAAGCAAACTCGAATCCCCTCAAGCCCAAATTGAAGAACTCTTTGTTTACCATATCAGGGGAATTGAATGGAATGAGAATGTTAGGTTAAAC GTTCTAAAAAAGAAGGTTTTTTAGGGGTAGTTTTCGTAAATGGAGACAATGAAAAAGGGCAAAAAAGGAACAGAAAAAAAAGAAGCGCAAGAGAGCTTATCTTCATCTTCAATGGCATGCTGAGCTTTCTTCATCCAACAAAAAGCGCTGTGACTGAACAAAACCACACACAGACTCCGCAAAGATGATAAACCTTTCAATTTCATCGCCTTCGAGCATTTCTCTCCCTCCAAAAATTCTCAGCTCCACCTCCAAATCCTCCTTCAATGGCGCTCAAATCCGTTTCCCGTTATCGTTTCGCGTTCCCCCAAAAACGGCATGCACCGGCGGCCGCAATTCGTCGGCGGTAATGATGGCGAAGAAGGATGAGGAATTGAAGAAAATCAGAGCGAAGAGCACTGAGGAAATCAACGAAGAGGTCGTCGATCTTAAGGGCGAGCTTCTTATGCTTCGGCTTCAGAAATCGGCTCGCAATGAGTTCAAGTCCAGCGAATTCCGCCGTATGCGTAAACGGATTGCTCGGATGCTAACTGTAAAACGCGAACGAGAGATCGAAGAGGGAGTGGGGAAAAGGCTGTCAAGAAAGCTAGACAGGAAGTGGAAGAAGAGTATTGTGGTCAGACCACCTCCATCTTTGAAGAAGTTGCGAGAGGAAGAAGCAGCAGCTGAAGCAGCTGAGAAATCTGCTTGATCCAACCAGATATGTTTTCAAACATAATTGTAGCTTTATGAGTTGTTCTTTTCTTAAAAAAAAAACTAAAAAAAAGAGTATGAAGTTGTTGAGAATGCTATTTAAACAACGTTCTAGATTTTTTGTTTTTATTTTTCCTGAAAAAATCTGATAAATTGGAAATAGATTTTGAGGGGATCATGTTGAATTCTTATTCTTTCATGTCTACGCCTTTTATCTGAGATAAACCAAAGCAAACTCGAATCCCCTCAAGCCCAAATTGAAGAACTCTTTGTTTACCATATCAGGGGAATTGAATGGAATGAGAATGTTAGGTTAAAC ATGATAAACCTTTCAATTTCATCGCCTTCGAGCATTTCTCTCCCTCCAAAAATTCTCAGCTCCACCTCCAAATCCTCCTTCAATGGCGCTCAAATCCGTTTCCCGTTATCGTTTCGCGTTCCCCCAAAAACGGCATGCACCGGCGGCCGCAATTCGTCGGCGGTAATGATGGCGAAGAAGGATGAGGAATTGAAGAAAATCAGAGCGAAGAGCACTGAGGAAATCAACGAAGAGGTCGTCGATCTTAAGGGCGAGCTTCTTATGCTTCGGCTTCAGAAATCGGCTCGCAATGAGTTCAAGTCCAGCGAATTCCGCCGTATGCGTAAACGGATTGCTCGGATGCTAACTGTAAAACGCGAACGAGAGATCGAAGAGGGAGTGGGGAAAAGGCTGTCAAGAAAGCTAGACAGGAAGTGGAAGAAGAGTATTGTGGTCAGACCACCTCCATCTTTGAAGAAGTTGCGAGAGGAAGAAGCAGCAGCTGAAGCAGCTGAGAAATCTGCTTGA MINLSISSPSSISLPPKILSSTSKSSFNGAQIRFPLSFRVPPKTACTGGRNSSAVMMAKKDEELKKIRAKSTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEAAEKSA Homology
BLAST of Sed0015800 vs. NCBI nr
Match: XP_038903244.1 (50S ribosomal protein L29, chloroplastic [Benincasa hispida]) HSP 1 Score: 277.7 bits (709), Expect = 6.6e-71 Identity = 153/168 (91.07%), Postives = 162/168 (96.43%), Query Frame = 0
BLAST of Sed0015800 vs. NCBI nr
Match: XP_022941582.1 (50S ribosomal protein L29, chloroplastic-like [Cucurbita moschata] >KAG6600658.1 50S ribosomal protein L29, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031295.1 50S ribosomal protein L29, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 273.1 bits (697), Expect = 1.6e-69 Identity = 151/168 (89.88%), Postives = 159/168 (94.64%), Query Frame = 0
BLAST of Sed0015800 vs. NCBI nr
Match: KAG6577307.1 (50S ribosomal protein L29, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015397.1 50S ribosomal protein L29, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 272.7 bits (696), Expect = 2.1e-69 Identity = 150/168 (89.29%), Postives = 159/168 (94.64%), Query Frame = 0
BLAST of Sed0015800 vs. NCBI nr
Match: XP_022985118.1 (50S ribosomal protein L29, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 272.7 bits (696), Expect = 2.1e-69 Identity = 151/168 (89.88%), Postives = 158/168 (94.05%), Query Frame = 0
BLAST of Sed0015800 vs. NCBI nr
Match: XP_022977189.1 (50S ribosomal protein L29, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 271.9 bits (694), Expect = 3.6e-69 Identity = 150/168 (89.29%), Postives = 159/168 (94.64%), Query Frame = 0
BLAST of Sed0015800 vs. ExPASy Swiss-Prot
Match: Q9FJP3 (50S ribosomal protein L29, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL29 PE=1 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 1.9e-44 Identity = 106/168 (63.10%), Postives = 138/168 (82.14%), Query Frame = 0
BLAST of Sed0015800 vs. ExPASy Swiss-Prot
Match: P82248 (50S ribosomal protein L29, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL29 PE=1 SV=2) HSP 1 Score: 154.8 bits (390), Expect = 8.4e-37 Identity = 94/161 (58.39%), Postives = 120/161 (74.53%), Query Frame = 0
BLAST of Sed0015800 vs. ExPASy Swiss-Prot
Match: Q9SWI6 (50S ribosomal protein L29, chloroplastic OS=Zea mays OX=4577 GN=RPL29 PE=2 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 5.1e-34 Identity = 78/108 (72.22%), Postives = 97/108 (89.81%), Query Frame = 0
BLAST of Sed0015800 vs. ExPASy Swiss-Prot
Match: B8HMR2 (50S ribosomal protein L29 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=rpmC PE=3 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 9.4e-04 Identity = 21/63 (33.33%), Postives = 44/63 (69.84%), Query Frame = 0
BLAST of Sed0015800 vs. ExPASy TrEMBL
Match: A0A6J1FMW5 (50S ribosomal protein L29, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111446894 PE=3 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 7.8e-70 Identity = 151/168 (89.88%), Postives = 159/168 (94.64%), Query Frame = 0
BLAST of Sed0015800 vs. ExPASy TrEMBL
Match: A0A6J1JCM6 (50S ribosomal protein L29, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111483200 PE=3 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 1.0e-69 Identity = 151/168 (89.88%), Postives = 158/168 (94.05%), Query Frame = 0
BLAST of Sed0015800 vs. ExPASy TrEMBL
Match: A0A6J1IQR3 (50S ribosomal protein L29, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111477475 PE=3 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 1.7e-69 Identity = 150/168 (89.29%), Postives = 159/168 (94.64%), Query Frame = 0
BLAST of Sed0015800 vs. ExPASy TrEMBL
Match: A0A6J1EMX4 (50S ribosomal protein L29, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111435958 PE=3 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 8.1e-67 Identity = 148/168 (88.10%), Postives = 156/168 (92.86%), Query Frame = 0
BLAST of Sed0015800 vs. ExPASy TrEMBL
Match: A0A6J1C3N4 (50S ribosomal protein L29, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008086 PE=3 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 2.6e-65 Identity = 146/168 (86.90%), Postives = 154/168 (91.67%), Query Frame = 0
BLAST of Sed0015800 vs. TAIR 10
Match: AT5G65220.1 (Ribosomal L29 family protein ) HSP 1 Score: 180.3 bits (456), Expect = 1.3e-45 Identity = 106/168 (63.10%), Postives = 138/168 (82.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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