Sed0015785 (gene) Chayote v1

Overview


Name	Sed0015785
Type	gene
Organism	Sechium edule (Chayote v1)
Description	calmodulin-like
Location	LG11: 24106567 .. 24111193 (-)
RNA-Seq Expression	Sed0015785
Synteny	Sed0015785

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCTATTCAAATCACATATGAAGTTGTCGAGGGAGGAGATGAAGGATCTCTTTAGAGAGCACGACATCGACGGAGATGGCGTCCTCAGCATGAGTGAGATCACTCAAGTCTTTAGCTTATTAGGAAATCGTCTCCCATACTACAAAGCTCACTATGGTCTCTCATATGCTGATGAAGATGGTGATGGCTTAATCACCGAAGACGAGCTTGATAAGCTCGTTGATTATGCCATGAGGTTCCAGGGCCCGAATGGTCGTCTCAATGGTAAACCACACGCTGGTAAATCACACCCTGGTAACTCCATCGATGGTAAATCCATCGAGTAATCGATCTAGGTTTATCTATATGGTCAATAATATGTCTGTGGTTGACCTTTTATTTCACTACGCACTATGTTCCTTAATAAAGTACTATCCCTTCCTCTTGAAGGTTTTAATTTTATGAAAACTACTGACGTCTTTGAATGTCATGTGTAGACAAATTATTGAAATAAACAAGTTTAGATAAAAAAAAGTTATCCGAACAGACATCCATACATTCAAATGATATATATATCATTTTACATGATATTTACATGATATATAGTAATCAACATAGATATTTACATGATTCATAAACGATTACATTTACAACATCAATGGATAGGAATGTTAGGGTCTCACGATTGTCCAACGTTGGAAAAGTATGGAGTCTTACAAGTCTATAAGAGATATAAGTACTTCACTCGTTGCCAATTGATTTTGAAGTGGAATTTCATATGTTATAATATGGTATTAGAGCACAAATAGTCCAAACAAGAATTGGACCAATAAAAATGATATTGAGATCCAATTCAAGATTAGTGAGCCCAAAATAGGCACTATCTTGAGATGACATATTAGGATTTCACAATTGTCCCTCATTTATAAGAGATATGAATTATTCTCTCCATTGTCAATTGATTTTAAAGTAGAATCTAGATATTCTCTAATAAAGAATAGTCATTTTTATAAAGGAGTTAGCATAGGGAAAACAGAATACACAATATTATATCCGAGTTCGAAAGAGTTAATAAATAACACTCTTTTGTAAATGGAATTGCTACTTCAACAATTTTAATTATAATGTATTTTAAAAATATTTTATCTACAAATTTTTTTGTATTTTCTTATATTCTAGAATTATTATTTCAATGAACTGAACTTAGATTTTTGTTTAATTGATTGAATGGATTGTTTTCAATTAGTTGAGCTTACTTGCTTTTATTCAGCTATATTAATTGTTATTACTGAGCTGAATTGATTGAAATTAATTAGTTCATTTGATTTTTTCCGTGGACGTTTTTTGCTATAAATTTTCTTCTAAATTTTTTTTTCTTGTCTATGCAATCTTTATTTATTATCTTTTTATACAAGAAAATTCTCCTTCGTAAATCTTAAACAGAAAATGCTTCGTACTTAAATAATTCTTTATATATATAACTTATGTTTTGGTGGCATTGACCAAAACCGACAAATAACACTACTAGAAAAACTAAATATATGAACTATAATTTATAGTCATAAATACCTTATATAACTAAAAATAAAAGTTGTTTATACCTAGTGTTATGAAAGGTTTAACTATGACACTTCATTAAAAGTGTCACGGTAGAACCAATTATAACATTATAGTATAGTCATTGTTGAAACATTAATAACACATGTTTATAGTCATTGAAGAATTAATAACGACAATATAGAAGTGTCATAATCAGAATCATTTATGGCATTATATTATAGTCATGGTTAAACCATTAATGACATATATGTATAGTCATTGAAGAAGTATTAAAAAAACATTGTACATGTTGTTCCGTGTAGTTAATGAATCAGGCTTTGAGAAGATTGCTAGAGCAAAAACTTCAAAAGAAGTGTGGGATACATTAGAAAAAGTGTTCAAAGGAGCTCACCGAATCAAGCAAGTGCATCTCCAAACTCTTCGCGGCGAGTTGGAGAGCATAAGGATGAAGGAGCCAGAAAGCGTATCTGACTATATCATGCATGTGCAGACGGTGGTGAACTAACTCAATCGCAAGGGTGAAAAGCTAACGGATGTGCAAGTTGTGGAAAAGATTTTGAGATCATTGACGGATAATTTTGAGAATATTGTATGCGCAAGAGAAAAGTCAAAGGATCTTGGGACGCTCACTCTTGATGAGCTTGTTGTTCTCTTCAGGCATACGAACAGCGAAAGAACAAGAAGAAATAGGAATTGTTGGAGCAAGCACTTCAAACCAAGGTGTCAATCGAAGATGAAAATGTACTATATTCTAAACAGTTTCAGGGTAGAGGTTGCGACCGTGGGAGGTAGTGGATATGGTCGCAATAGTCAAAATGCCAGTTATGATGCGAAGAAGGGACATACGAGCAAGCGAATTGGTGCGAAAGAGGACGTTGCCCAGGAAGAGGAAATCGAACGAATCAATCTAATATTGAATGCTACAAATGTCACAAGTATGGTCACTATGTGAGTGACTAGTATTCCAAAAAATGCTACAATTATGGACAAGAAAGGAATTTTGCGAGAGAATCCTGAGCGTAGAAAAAGGTTGAAGAAACAACCAACCTAGCATTAGAAGGCAATGCGAAAGAAGGTGTTCTTTTGATGGCGCATAAAGAAGGCAGCAACAACAATGAAACTATATGGTATCTCAAGAGCAAGCAAACATGTTTGTAGTTACGAGCATCTGTTTAAAGAGATGCGAATAATTGAAGATGGACATGTATCTTTTGGCAATGCATAAAAAGTAAAAGTGTTTGCGAATTGATGTAGAAGATAAGACATCATTGTGGCATCTTCATTTTGGTCACTCACATAATGGTGGACTAAAAGAGTCAGTGAAGAAAGATATGGTGCACAGGTTACCTGACATGGACTATGAAGGAATGTTTTATGAAGAATGCGTGCTCAGCAAGCTTGCGAGAACGTCGTTTCAAAAGAATGCGCAATATCGGGTGAAACAACTGTTCAAGGCGATTTATACGGATATATTCGGACCAATTACCCCAAAATCTTTCAGCGGAAAAAGTTACTTCATTTCTTTTATTAATGGTTTCTCCAGGAAAAATATGGGTGTATTTTTTGAAAGAAAAGTTAGAGGCATTCGAGGCATTCAAAAGATTCATAGGGTGGTAGATATACTTTGACAACTTTTATGAAGTATTGCTAGGAGCAAGACATAAGGTGATCTCTAACCGCACCATACACTCCTCAATAAATTGGTGTTGTTGAGAGGAAAAATAGAACCATTGTTGACATGGTTCGAGCAATGCTGAAGAGTAAAAGTATGCCAAAGGAATTTTGGATGGAAGTAGTGCAGTGCACAATCTATGTACAAAATCGATGTTCACGTGCGAAACAAGATGATAAAACACCGCAAGAGGCATGGAGGAGACGAAAGTCGATAGTTTTACATCTCAGATGGTAGTATGGCTTATGCACACGTACTCGATCAGCGAAGAACAAAGCTCGAAGACAAGAGCAAGATATATATGTTTATTAGCTATGATGAAAAAACAAAAGGATACAAGCTACATGCAAGAAGATGTTGGTGAGTCGCGATGTGTGAGTAAATGAAGAAAGTGAATGAGACTGAAACAATTCGATGGAAGACAGCATCGAGGTTGGAGAATTACCAATTTTTGCATCAACGAGTATGCCAAGAGATCATAAAGCAACCGATGATGAAGATGAAGCGCAACAACCTAGAATACAGAGTTTGCAAGATACGTACAATGAGATAAATGAGGAACATCTTGTATATATTTTGACAGATGCAGAAGTATTAGCTTTAAAGAAGAGCTGAAAGATGAGAAGTGGCGAATAGAAATGTATGATGAGATTAATGAGATTAAGTGAAATGATACATGGAAGTTGATAGAATTGTCGAATGCAAGTCAGCTGATTGGTGTGAAGTGGGTATTCAAGAAAACGATGAATGTGAAAGGGAAGATAGAGCGATACAAGGCGAGACTTGTTGCGAAGGGATACAAGTAGAAAGTGGGAATTGACTATTACGAAGTTTTTGCTCCCATTGCGACAATGGAGACAATCCGATTGGTCATTTCTCAAGCGGCACAAATTTAAATGGCCGATTTATCAAATGGATGTAAAAATAACATTTTTTAACAATGTGCTTGAAAAAGAAGTGTACATTGAGAAACCACCCGGATATGTGAAAATTGGAGAAAAGAAGAAGGTGCTAATTAAAGTTGAAAAAAGTATTTTACGGGTTTAAGCAAGCACCGCGAGCATGAAATACTCGCATTAATACATATTTTAAGGAAAATGGATACAATGAGTGTCCTTACGAGCATGCTTTAAACATTAAAAACATTAAAAACATTAATGGATATATATTTCTAGTCTCTTCTAGAGACTGGTCTTAATGTGTCGTGGTGGAACACTTTAAACATTAATGCACATTAAAACTTGCAGATGGAAAATATTTAGCCATAAGCTAATTGTATTGGGGAATATTATGAGAGGTTGCATGTCTAATTTTTTTTATATATTAGCAACACTATGGACAATCACATGACCTTATAGTTATTTGAAGCTCTATTCTCATAAATGATTGTGTTTAATCATTTTATGAATGAA

mRNA sequence

ATGGCGCTATTCAAATCACATATGAAGTTGTCGAGGGAGGAGATGAAGGATCTCTTTAGAGAGCACGACATCGACGGAGATGGCGTCCTCAGCATGAGTGAGATCACTCAAGTCTTTAGCTTATTAGGAAATCGTCTCCCATACTACAAAGCTCACTATGGTCTCTCATATGCTGATGAAGATGGTGATGGCTTAATCACCGAAGACGAGCTTGATAAGCTCGTTGATTATGCCATGAGGTTCCAGGGCCCGAATGGTCGTCTCAATGGTAAACCACACGCTGTTAATGAATCAGGCTTTGAGAAGATTGCTAGAGCAAAAACTTCAAAAGAAGTGTGGGATACATTAGAAAAAGTGTTCAAAGGAGCTCACCGAATCAAGCAAGTGCATCTCCAAACTCTTCGCGGCGAGTTGGAGAGCATAAGGATGAAGGAGCCAGAAAGCGTATCTGACTATATCATGCATGTGCAGACGGTGGTGAACTAACTCAATCGCAAGGGTGAAAAGCTAACGGATGTGCAAGTTGTGGAAAAGATTTTGAGATCATTGACGGATAATTTTGAGAATATTGTATGCGCAAGAGAAAAGTCAAAGGATCTTGGGACGCTCACTCTTGATGAGCTTGTTGTTCTCTTCAGGCATACGAACAGCGAAAGAACAAGAAGAAATAGGAATTGTTGGAGCAAGCACTTCAAACCAAGGTGTCAATCGAAGATGAAAATGTACTATATTCTAAACAGTTTCAGGGTAGAGGTTGCGACCGTGGGAGGTAGTGGATATGGTCGCAATAGTCAAAATGCCAGTTATGATGCGAAGAAGGGACATACGAGCAAGCGAATTGGTGCGAAAGAGGACGTTGCCCAGGAAGAGGAAATCGAACGAATCAATCTAATATTGAATGCTACAAATGTCACAAGTATGGTCACTATGTGAGTGACTAGTATTCCAAAAAATGCTACAATTATGGACAAGAAAGGAATTTTGCGAGAGAATCCTGAGCGTAGAAAAAGGTTGAAGAAACAACCAACCTAGCATTAGAAGGCAATGCGAAAGAAGGTGTTCTTTTGATGGCGCATAAAGAAGGCAGCAACAACAATGAAACTATATGGTATCTCAAGAGCAAGCAAACATGTTTGTAGTTACGAGCATCTGTTTAAAGAGATGCGAATAATTGAAGATGGACATGTATCTTTTGGCAATGCATAAAAAGTAAAAGTGTTTGCGAATTGATGTAGAAGATAAGACATCATTGTGGCATCTTCATTTTGGTCACTCACATAATGGTGGACTAAAAGAGTCAGTGAAGAAAGATATGGTGCACAGGTTACCTGACATGGACTATGAAGGAATGTTTTATGAAGAATGCGTGCTCAGCAAGCTTGCGAGAACGTCGTTTCAAAAGAATGCGCAATATCGGGTGAAACAACTGTTCAAGGCGATTTATACGGATATATTCGGACCAATTACCCCAAAATCTTTCAGCGGAAAAAGTTACTTCATTTCTTTTATTAATGGTTTCTCCAGGAAAAATATGGGTGTATTTTTTGAAAGAAAAGTTAGAGGCATTCGAGGCATTCAAAAGATTCATAGGGTGGTAGATATACTTTGACAACTTTTATGAAGTATTGCTAGGAGCAAGACATAAGGTGATCTCTAACCGCACCATACACTCCTCAATAAATTGGTGTTGTTGAGAGGAAAAATAGAACCATTGTTGACATGGTTCGAGCAATGCTGAAGAGTAAAAGTATGCCAAAGGAATTTTGGATGGAAGTAGTGCAGTGCACAATCTATGTACAAAATCGATGTTCACGTGCGAAACAAGATGATAAAACACCGCAAGAGGCATGGAGGAGACGAAAGTCGATAGTTTTACATCTCAGATGGTAGTATGGCTTATGCACACGTACTCGATCAGCGAAGAACAAAGCTCGAAGACAAGAGCAAGATATATATGTTTATTAGCTATGATGAAAAAACAAAAGGATACAAGCTACATGCAAGAAGATGTTGGTGAGTCGCGATGTGTGAGTAAATGAAGAAAGTGAATGAGACTGAAACAATTCGATGGAAGACAGCATCGAGGTTGGAGAATTACCAATTTTTGCATCAACGAGTATGCCAAGAGATCATAAAGCAACCGATGATGAAGATGAAGCGCAACAACCTAGAATACAGAGTTTGCAAGATACGTACAATGAGATAAATGAGGAACATCTTGTATATATTTTGACAGATGCAGAAGTATTAGCTTTAAAGAAGAGCTGAAAGATGAGAAGTGGCGAATAGAAATGTATGATGAGATTAATGAGATTAAGTGAAATGATACATGGAAGTTGATAGAATTGTCGAATGCAAGTCAGCTGATTGGTGTGAAGTGGGTATTCAAGAAAACGATGAATGTGAAAGGGAAGATAGAGCGATACAAGGCGAGACTTGTTGCGAAGGGATACAAGTAGAAAGTGGGAATTGACTATTACGAAGTTTTTGCTCCCATTGCGACAATGGAGACAATCCGATTGGTCATTTCTCAAGCGGCACAAATTTAAATGGCCGATTTATCAAATGGATGTAAAAATAACATTTTTTAACAATGTGCTTGAAAAAGAAGTGTACATTGAGAAACCACCCGGATATGTGAAAATTGGAGAAAAGAAGAAGGTGCTAATTAAAGTTGAAAAAAGTATTTTACGGGTTTAAGCAAGCACCGCGAGCATGAAATACTCGCATTAATACATATTTTAAGGAAAATGGATACAATGAGTGTCCTTACGAGCATGCTTTAAACATTAAAAACATTAAAAACATTAATGGATATATATTTCTAGTCTCTTCTAGAGACTGGTCTTAATGTGTCGTGGTGGAACACTTTAAACATTAATGCACATTAAAACTTGCAGATGGAAAATATTTAGCCATAAGCTAATTGTATTGGGGAATATTATGAGAGGTTGCATGTCTAATTTTTTTTATATATTAGCAACACTATGGACAATCACATGACCTTATAGTTATTTGAAGCTCTATTCTCATAAATGATTGTGTTTAATCATTTTATGAATGAA

Coding sequence (CDS)

ATGGCGCTATTCAAATCACATATGAAGTTGTCGAGGGAGGAGATGAAGGATCTCTTTAGAGAGCACGACATCGACGGAGATGGCGTCCTCAGCATGAGTGAGATCACTCAAGTCTTTAGCTTATTAGGAAATCGTCTCCCATACTACAAAGCTCACTATGGTCTCTCATATGCTGATGAAGATGGTGATGGCTTAATCACCGAAGACGAGCTTGATAAGCTCGTTGATTATGCCATGAGGTTCCAGGGCCCGAATGGTCGTCTCAATGGTAAACCACACGCTGTTAATGAATCAGGCTTTGAGAAGATTGCTAGAGCAAAAACTTCAAAAGAAGTGTGGGATACATTAGAAAAAGTGTTCAAAGGAGCTCACCGAATCAAGCAAGTGCATCTCCAAACTCTTCGCGGCGAGTTGGAGAGCATAAGGATGAAGGAGCCAGAAAGCGTATCTGACTATATCATGCATGTGCAGACGGTGGTGAACTAA

Protein sequence

MALFKSHMKLSREEMKDLFREHDIDGDGVLSMSEITQVFSLLGNRLPYYKAHYGLSYADEDGDGLITEDELDKLVDYAMRFQGPNGRLNGKPHAVNESGFEKIARAKTSKEVWDTLEKVFKGAHRIKQVHLQTLRGELESIRMKEPESVSDYIMHVQTVVN

Homology

[Close]

BLAST of Sed0015785 vs. NCBI nr
Match: KGN62525.1 (hypothetical protein Csa_022453 [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 6.4e-23
Identity = 51/77 (66.23%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 6  SHMKLSREEMKDLFREHDIDGDGVLSMSEITQVFSLLGNRLPYYKAHYGLSYADEDGDGL 65
          S    SREEMK++FREHDIDGDG LS+SE+ +    LG+ +P+YKAHYG++Y DE+GDGL
Sbjct: 7  SKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGL 66

Query: 66 ITEDELDKLVDYAMRFQ 83
          I+EDELDKL+DYA RFQ
Sbjct: 67 ISEDELDKLIDYAERFQ 83

[Close]

BLAST of Sed0015785 vs. NCBI nr
Match: XP_022951880.1 (calmodulin-like [Cucurbita moschata])

HSP 1 Score: 114.8 bits (286), Expect = 7.0e-22
Identity = 51/80 (63.75%), Postives = 65/80 (81.25%), Query Frame = 0


Query: 7   HMKLSREEMKDLFREHDIDGDGVLSMSEITQVFSLLGNRLPYYKAHYGLSYADEDGDGLI 66
           HM+LSR E++D+F EHDIDGDG L++SE+T+ FS +G+ LP YKAHYGL+YAD DGDG I
Sbjct: 76  HMRLSRSEIRDIFLEHDIDGDGYLNVSELTKAFSFIGSMLPLYKAHYGLNYADADGDGRI 135

Query: 67  TEDELDKLVDYAMRFQGPNG 87
           +E+EL+KLVDYA R     G
Sbjct: 136 SEEELEKLVDYAERVSRRKG 155

[Close]

BLAST of Sed0015785 vs. NCBI nr
Match: KAA0060886.1 (putative calcium-binding protein CML10 [Cucumis melo var. makuwa])

HSP 1 Score: 114.8 bits (286), Expect = 7.0e-22
Identity = 49/78 (62.82%), Postives = 64/78 (82.05%), Query Frame = 0


Query: 6  SHMKLSREEMKDLFREHDIDGDGVLSMSEITQVFSLLGNRLPYYKAHYGLSYADEDGDGL 65
          S    SREEMK++FREHDIDGDG LS+ E+ +    LG+ +P+YKAHYG++Y+DE+GDGL
Sbjct: 7  SKFNFSREEMKEIFREHDIDGDGYLSIGELIKAMGFLGHSIPFYKAHYGMAYSDENGDGL 66

Query: 66 ITEDELDKLVDYAMRFQG 84
          I+EDELDKL+DYA R +G
Sbjct: 67 ISEDELDKLIDYAERKEG 84

[Close]

BLAST of Sed0015785 vs. NCBI nr
Match: XP_004152805.1 (probable calcium-binding protein CML10 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 9.2e-22
Identity = 49/81 (60.49%), Postives = 68/81 (83.95%), Query Frame = 0


Query: 2   ALFKSHMKLSREEMKDLFREHDIDGDGVLSMSEITQVFSLLGNRLPYYKAHYGLSYADED 61
           A+  + ++LSRE++K++FREHDIDGDG LSM+E+ + F   G+ LP+YKAHYG+++ADE+
Sbjct: 83  AIKSTRLQLSREDIKEIFREHDIDGDGRLSMNEMVKAFGCFGSILPFYKAHYGMAHADEN 142

Query: 62  GDGLITEDELDKLVDYAMRFQ 83
           GDG I E+ELDKLVDYA +FQ
Sbjct: 143 GDGFIEEEELDKLVDYAQKFQ 163

[Close]

BLAST of Sed0015785 vs. NCBI nr
Match: XP_023537874.1 (probable calcium-binding protein CML11 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 113.6 bits (283), Expect = 1.6e-21
Identity = 51/80 (63.75%), Postives = 64/80 (80.00%), Query Frame = 0


Query: 7   HMKLSREEMKDLFREHDIDGDGVLSMSEITQVFSLLGNRLPYYKAHYGLSYADEDGDGLI 66
           HM+LSR E++D+F EHDIDGDG L++SE+T+ FS +G+ LP YKAHYGL+YAD DGDG I
Sbjct: 62  HMRLSRSEIRDIFLEHDIDGDGYLNVSELTKAFSFIGSMLPLYKAHYGLNYADADGDGRI 121

Query: 67  TEDELDKLVDYAMRFQGPNG 87
           +E+EL KLVDYA R     G
Sbjct: 122 SEEELGKLVDYAERVSRRKG 141

[Close]

BLAST of Sed0015785 vs. ExPASy Swiss-Prot
Match: P05933 (Calmodulin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cam1 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.6e-05
Identity = 22/65 (33.85%), Postives = 40/65 (61.54%), Query Frame = 0


Query: 11  SREEMKDLFREHDIDGDGVLSMSEITQVFSLLGNRLPYYKAHYGLSYADEDGDGLITEDE 70
           + EE+++ F+  D DG+G +++ E+T V + LG RL   +    +  AD DGDG+I  +E
Sbjct: 83  NEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEE 142

Query: 71  LDKLV 76
             +++
Sbjct: 143 FSRVI 147

[Close]

BLAST of Sed0015785 vs. ExPASy Swiss-Prot
Match: Q8X187 (Calmodulin OS=Paxillus involutus OX=71150 GN=calA PE=2 SV=3)

HSP 1 Score: 49.7 bits (117), Expect = 3.6e-05
Identity = 25/65 (38.46%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 11  SREEMKDLFREHDIDGDGVLSMSEITQVFSLLGNRLPYYKAHYGLSYADEDGDGLITEDE 70
           S EE+K+ F+  D DG+G +S +E+  V + LG +L   +    +  AD DGDG I  DE
Sbjct: 82  SEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDTEVDEMIREADVDGDGQINYDE 141

Query: 71  LDKLV 76
             K++
Sbjct: 142 FVKMM 146

[Close]

BLAST of Sed0015785 vs. ExPASy Swiss-Prot
Match: P11118 (Calmodulin OS=Euglena gracilis OX=3039 PE=1 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 4.8e-05
Identity = 26/71 (36.62%), Postives = 40/71 (56.34%), Query Frame = 0


Query: 5   KSHMKLSREEMKDLFREHDIDGDGVLSMSEITQVFSLLGNRLPYYKAHYGLSYADEDGDG 64
           K H   + EE+K+ FR  D DG+G +S +E+  V + LG +L   +    +  AD DGDG
Sbjct: 76  KMHDTDTEEEIKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG 135

Query: 65  LITEDELDKLV 76
            I  +E  K++
Sbjct: 136 QINYEEFVKMM 146

[Close]

BLAST of Sed0015785 vs. ExPASy Swiss-Prot
Match: P62184 (Calmodulin OS=Renilla reniformis OX=6136 PE=1 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 4.8e-05
Identity = 24/65 (36.92%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 11  SREEMKDLFREHDIDGDGVLSMSEITQVFSLLGNRLPYYKAHYGLSYADEDGDGLITEDE 70
           S EE+++ FR  D DGDG +S +E+  V + LG +L   +    +  AD DGDG +  +E
Sbjct: 82  SEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141

Query: 71  LDKLV 76
             K++
Sbjct: 142 FVKMM 146

[Close]

BLAST of Sed0015785 vs. ExPASy Swiss-Prot
Match: P18061 (Calmodulin OS=Trypanosoma cruzi OX=5693 GN=CALA2 PE=3 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 4.8e-05
Identity = 25/65 (38.46%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 11  SREEMKDLFREHDIDGDGVLSMSEITQVFSLLGNRLPYYKAHYGLSYADEDGDGLITEDE 70
           S EE+K+ FR  D DG+G +S +E+  V + LG +L   +    +  AD DGDG I  +E
Sbjct: 82  SEEEIKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141

Query: 71  LDKLV 76
             K++
Sbjct: 142 FVKMM 146

[Close]

BLAST of Sed0015785 vs. ExPASy TrEMBL
Match: A0A0A0LKX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359940 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 3.1e-23
Identity = 51/77 (66.23%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 6  SHMKLSREEMKDLFREHDIDGDGVLSMSEITQVFSLLGNRLPYYKAHYGLSYADEDGDGL 65
          S    SREEMK++FREHDIDGDG LS+SE+ +    LG+ +P+YKAHYG++Y DE+GDGL
Sbjct: 7  SKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGL 66

Query: 66 ITEDELDKLVDYAMRFQ 83
          I+EDELDKL+DYA RFQ
Sbjct: 67 ISEDELDKLIDYAERFQ 83

[Close]

BLAST of Sed0015785 vs. ExPASy TrEMBL
Match: A0A5A7V2Z9 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00190 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 3.4e-22
Identity = 49/78 (62.82%), Postives = 64/78 (82.05%), Query Frame = 0


Query: 6  SHMKLSREEMKDLFREHDIDGDGVLSMSEITQVFSLLGNRLPYYKAHYGLSYADEDGDGL 65
          S    SREEMK++FREHDIDGDG LS+ E+ +    LG+ +P+YKAHYG++Y+DE+GDGL
Sbjct: 7  SKFNFSREEMKEIFREHDIDGDGYLSIGELIKAMGFLGHSIPFYKAHYGMAYSDENGDGL 66

Query: 66 ITEDELDKLVDYAMRFQG 84
          I+EDELDKL+DYA R +G
Sbjct: 67 ISEDELDKLIDYAERKEG 84

[Close]

BLAST of Sed0015785 vs. ExPASy TrEMBL
Match: A0A6J1GK54 (calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111454617 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 3.4e-22
Identity = 51/80 (63.75%), Postives = 65/80 (81.25%), Query Frame = 0


Query: 7   HMKLSREEMKDLFREHDIDGDGVLSMSEITQVFSLLGNRLPYYKAHYGLSYADEDGDGLI 66
           HM+LSR E++D+F EHDIDGDG L++SE+T+ FS +G+ LP YKAHYGL+YAD DGDG I
Sbjct: 76  HMRLSRSEIRDIFLEHDIDGDGYLNVSELTKAFSFIGSMLPLYKAHYGLNYADADGDGRI 135

Query: 67  TEDELDKLVDYAMRFQGPNG 87
           +E+EL+KLVDYA R     G
Sbjct: 136 SEEELEKLVDYAERVSRRKG 155

[Close]

BLAST of Sed0015785 vs. ExPASy TrEMBL
Match: A0A6J1KRR4 (calmodulin-A-like OS=Cucurbita maxima OX=3661 GN=LOC111496627 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 7.6e-22
Identity = 51/80 (63.75%), Postives = 64/80 (80.00%), Query Frame = 0


Query: 7   HMKLSREEMKDLFREHDIDGDGVLSMSEITQVFSLLGNRLPYYKAHYGLSYADEDGDGLI 66
           HM+LSR E++D+F EHDIDGDG L++SE+T+ FS +G+ LP YKAHYGL+YAD DGDG I
Sbjct: 76  HMRLSRSEIRDIFLEHDIDGDGYLNVSELTKAFSFIGSMLPLYKAHYGLNYADADGDGRI 135

Query: 67  TEDELDKLVDYAMRFQGPNG 87
           +E+EL KLVDYA R     G
Sbjct: 136 SEEELGKLVDYAERVSRRKG 155

[Close]

BLAST of Sed0015785 vs. ExPASy TrEMBL
Match: A0A5A7UYC0 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00250 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 7.6e-22
Identity = 50/82 (60.98%), Postives = 68/82 (82.93%), Query Frame = 0


Query: 1  MALFKSHMKLSREEMKDLFREHDIDGDGVLSMSEITQVFSLLGNRLPYYKAHYGLSYADE 60
          M+   S ++LSRE++K++FREHDIDGDG LS+SE+ + F   G+ LP+YKAHYG+++ADE
Sbjct: 1  MSRAASKLQLSREDIKEIFREHDIDGDGRLSLSEMVKAFGFFGSILPFYKAHYGMAHADE 60

Query: 61 DGDGLITEDELDKLVDYAMRFQ 83
          +GDG I E+ELDKLVDYA +FQ
Sbjct: 61 NGDGYIEEEELDKLVDYAEKFQ 82

[Close]

BLAST of Sed0015785 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 )

HSP 1 Score: 47.0 bits (110), Expect = 1.7e-05
Identity = 24/65 (36.92%), Postives = 37/65 (56.92%), Query Frame = 0


Query: 11  SREEMKDLFREHDIDGDGVLSMSEITQVFSLLGNRLPYYKAHYGLSYADEDGDGLITEDE 70
           S EE+K+ FR  D D +G +S +E+  V + LG +L   +    +  AD DGDG I  +E
Sbjct: 82  SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEE 141

Query: 71  LDKLV 76
             K++
Sbjct: 142 FVKIM 146

[Close]

BLAST of Sed0015785 vs. TAIR 10
Match: AT1G66410.2 (calmodulin 4 )

HSP 1 Score: 47.0 bits (110), Expect = 1.7e-05
Identity = 24/65 (36.92%), Postives = 37/65 (56.92%), Query Frame = 0


Query: 11  SREEMKDLFREHDIDGDGVLSMSEITQVFSLLGNRLPYYKAHYGLSYADEDGDGLITEDE 70
           S EE+K+ FR  D D +G +S +E+  V + LG +L   +    +  AD DGDG I  +E
Sbjct: 92  SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEE 151

Query: 71  LDKLV 76
             K++
Sbjct: 152 FVKIM 156

[Close]

BLAST of Sed0015785 vs. TAIR 10
Match: AT4G14640.1 (calmodulin 8 )

HSP 1 Score: 47.0 bits (110), Expect = 1.7e-05
Identity = 23/65 (35.38%), Postives = 37/65 (56.92%), Query Frame = 0


Query: 11  SREEMKDLFREHDIDGDGVLSMSEITQVFSLLGNRLPYYKAHYGLSYADEDGDGLITEDE 70
           + EE+K+ F+  D D +G +S SE++ V   LG +L   +    +  AD DGDG +  DE
Sbjct: 83  AEEELKEAFKVFDKDQNGYISASELSHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYDE 142

Query: 71  LDKLV 76
             K++
Sbjct: 143 FVKMM 147

[Close]

BLAST of Sed0015785 vs. TAIR 10
Match: AT5G37780.1 (calmodulin 1 )

HSP 1 Score: 47.0 bits (110), Expect = 1.7e-05
Identity = 24/65 (36.92%), Postives = 37/65 (56.92%), Query Frame = 0


Query: 11  SREEMKDLFREHDIDGDGVLSMSEITQVFSLLGNRLPYYKAHYGLSYADEDGDGLITEDE 70
           S EE+K+ FR  D D +G +S +E+  V + LG +L   +    +  AD DGDG I  +E
Sbjct: 82  SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEE 141

Query: 71  LDKLV 76
             K++
Sbjct: 142 FVKIM 146

[Close]

BLAST of Sed0015785 vs. TAIR 10
Match: AT5G37780.2 (calmodulin 1 )

HSP 1 Score: 47.0 bits (110), Expect = 1.7e-05
Identity = 24/65 (36.92%), Postives = 37/65 (56.92%), Query Frame = 0


Query: 11  SREEMKDLFREHDIDGDGVLSMSEITQVFSLLGNRLPYYKAHYGLSYADEDGDGLITEDE 70
           S EE+K+ FR  D D +G +S +E+  V + LG +L   +    +  AD DGDG I  +E
Sbjct: 97  SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEE 156

Query: 71  LDKLV 76
             K++
Sbjct: 157 FVKIM 161

The following BLAST results are available for this feature:

BLAST of Sed0015785 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN62525.1	6.4e-23	66.23	hypothetical protein Csa_022453 [Cucumis sativus]	[more]
XP_022951880.1	7.0e-22	63.75	calmodulin-like [Cucurbita moschata]	[more]
KAA0060886.1	7.0e-22	62.82	putative calcium-binding protein CML10 [Cucumis melo var. makuwa]	[more]
XP_004152805.1	9.2e-22	60.49	probable calcium-binding protein CML10 [Cucumis sativus]	[more]
XP_023537874.1	1.6e-21	63.75	probable calcium-binding protein CML11 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0015785 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P05933	1.6e-05	33.85	Calmodulin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=c...	[more]
Q8X187	3.6e-05	38.46	Calmodulin OS=Paxillus involutus OX=71150 GN=calA PE=2 SV=3	[more]
P11118	4.8e-05	36.62	Calmodulin OS=Euglena gracilis OX=3039 PE=1 SV=2	[more]
P62184	4.8e-05	36.92	Calmodulin OS=Renilla reniformis OX=6136 PE=1 SV=2	[more]
P18061	4.8e-05	38.46	Calmodulin OS=Trypanosoma cruzi OX=5693 GN=CALA2 PE=3 SV=2	[more]

BLAST of Sed0015785 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKX1	3.1e-23	66.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359940 PE=4 SV=1	[more]
A0A5A7V2Z9	3.4e-22	62.82	Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1GK54	3.4e-22	63.75	calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111454617 PE=4 SV=1	[more]
A0A6J1KRR4	7.6e-22	63.75	calmodulin-A-like OS=Cucurbita maxima OX=3661 GN=LOC111496627 PE=4 SV=1	[more]
A0A5A7UYC0	7.6e-22	60.98	Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of Sed0015785 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66410.1	1.7e-05	36.92	calmodulin 4	[more]
AT1G66410.2	1.7e-05	36.92	calmodulin 4	[more]
AT4G14640.1	1.7e-05	35.38	calmodulin 8	[more]
AT5G37780.1	1.7e-05	36.92	calmodulin 1	[more]
AT5G37780.2	1.7e-05	36.92	calmodulin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13202	EF-hand_5	coord: 58..75 e-value: 0.026 score: 14.0
IPR002048	EF-hand domain	PFAM	PF13405	EF-hand_6	coord: 14..43 e-value: 1.4E-5 score: 24.6
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 10..45 score: 13.425486
None	No IPR available	GENE3D	1.10.238.10		coord: 1..84 e-value: 8.9E-13 score: 50.5
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 94..161 e-value: 7.6E-10 score: 38.7
None	No IPR available	PANTHER	PTHR34222:SF44	DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11A-LIKE	coord: 95..161
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 95..161
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 23..35
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 59..71
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 9..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015785.1	Sed0015785.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding