Sed0015762 (gene) Chayote v1

Overview


Name	Sed0015762
Type	gene
Organism	Sechium edule (Chayote v1)
Description	GTP-binding nuclear protein
Location	LG01: 10098869 .. 10102177 (+)
RNA-Seq Expression	Sed0015762
Synteny	Sed0015762

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTGCCATCTGCCTGCCATTAACGACCTCTGTTGGTCCAAATTTCTACGCAGTTCTTCGTGCTATAATCCTCAGTTGCAGAAACTCATTTTCGATGGTAAGAATTATTCTCTCATCTCTTCTTTCATCTTGTATTTGATATTTTATACGATTTCAAATTGTTGTTGGTTTCATTGCCTTGCTCAGGCGCTGCCGAATCAGGCCACCGTAGATTACCCTAGCTTCAAGCTCGTAATAGTCGGAGATGGTGGAACAGGTATGAAGATAAATTTGTTAGTTCAAGTTTTTCGAGATTTTCTTAAGCAGTTAAGCTCAATCAGCCATGGTTGTATAACTTTTAGAAACTAGTACTGTATTATGATGCTACTCCTCGGATTTTACTGAACTATACATTTTTAGTGGGATTGAAATTGTGCTATTAGCGCATGAATTCGATTGGAGATTATTATGATAAAACAAAATATTAGACTACGCTTATAGTTTCTCATAGTTTGTGTGATTAGAGATTGTTAGATCTTCTTTTCACAGATTTTTGTTTATTGCGATGGTTTTATTTACCACTAATGGAGTATTGTGTTCCGATCCAGGGAAAACGACCTTTGTTAAACGTCATATAACTGGAGAGTTCGAGAAGAAATATGAACGTAAGGAGCAACTATGTTGATTCTTACTTCATGAGTGATATTTGTTAGGTTGAAGCATTTTTAATATTTGGCTTGACTTGATTATGTATAGCCACGATCGGAGTTGAAGTGCATCCACTGGACTTCTTTACGAACTATGGCAAGATCAGGTTTTACTGCTGGGACACTGCTGGTCAGGAGAAGTTTGGTGGGCTTAGAGATGGTTACTAGTAAGTGTTCGTTTATCGTATTAAACGTGTTCTGCTTCATGGAAATGGTTTGAAATCTGAATACTGGTCATTGGATTTTGTGTGTGATAAGTATATAATATGTCCCTATGTAGTAGTTTATAATGAAGTTGCATGAATTTAAAGCCATTGTGTCTCTTGTTCAAGGGGGGAGAGATTTGATTTCTTCAATAGAATGGCATTACAATCTAGCTCAGTACCATAGATTAGAATGTTAAACAATTTCATCCCAAGATGTCCTTTTAAATCTCTTCAATCTGGCTTACTACTACATTTTGGTCTTAAGTCTGATCTTATAGGAAGCATGATTTTTTGTCTCGAGAAGTTGAGAACTTAATGAAATATATTAGAGAATGAAATTTGTTCTTTTGAATATTCTTAATTTTGAGCTGTATTATTGTAAGTGATCATGTTCGAAAAAAAATTCACAAATATTTGAATTCTTTTATAAACTATATATTATCTTATATTTTATATGATATTTAAATACGTTTGTCATATTCTCTATATTTAACTCTGTTGCAATATGTTGGAACACATATACATTGTAGTTCTCAAATTATCTTTAGTTTTCTTAGAATTTGACACGGTGCTGTCTGCTGTGACTTCGCTTGTGAGTTGTGACTTCAATTAACTGATTGTTTTTCCATGCTGGTTCTACACTCTCTCTCTGCTCTAGTATTAATGTAATTTCAATTAATTACTTGCTTTGTTCTTTGTACCTCTGTTTTTTCTGGTTAGCTCATCTGTATGTTTTTATTGCTTTGTTGATACTTCAGTTTTATGTTCGTGACTTCCTACTATCATTCGATTTTATTTTTACTAATAAGTGTATCTATACTAAACTTGTTCTTTTCTTCTTCTTTGGAATTTTCAGTATTCATGGGCAGTGTGCCATCATCATGTTTGATGTCACAGCTCGATTAACATACAAAAATGTCCCAACATGGCACCGTGATCTTTGCAGGTATTGTATTCATTAAACCTGGATCTGAAATTTGTATTTCTTATAAGGAAGTTTTCAAGAGGTTGCCGACTAGTGGGGTCTTTTGGGTGAAAAGAAAGATGATAACAGAGATTTGCGCCTTCTATTGTCATCGTAGTTGCTTAACATGCTGACAATATTTATTCAATAATTTAACTTTTGATATATCTACGTAAAATTGTAATTTCATTTAAGCAAGAGGTTAAAAGAACTTCTCTAACGAATTTTGAAACATATAAGAATCTTTAAGAGAATCCAATCATCCTGTCTTTTTGTGTCGTTTGTTTTTAAATCTGGCTTTGCTTTGTATTAGGGTTTGTGAGAACATACCGATCGTATTGTGTGGAAACAAGGTCGATATGAAAACCAGACAGGTTAAAGCAAAGCAGGTGACCTTCCACAGGAAGAAAAATCTACAGTACTATGAAATCTCTGCAAAAAGTAATTACAACTTTGAGAAGCCCTTCTTGTACCTTGCCAGAAAGCTTGCTGGGTACGTTCACTTGGTGTTAGTTTTCGAGTGTTCCTCATACTTTTGTTTGGTCTTTGTTCGACTTTTTGACAAACGATTTCTTCTTTTAATTGAACTTACAGGAACACAGAGCTCCAATTCGTTGAATCACCCGCCCTTGCTCCTCCTGAAGTCCAAATCAACTTGGCCGAACAAGCACAGTAAGTATTAACCATCCTCCAATTCGTTGAATCACCTGCCCTTTTAACTCATAAATAATTTTACTCGTGTCCCTTTCTCACCTGCACTTGGAATGTTGCACGGCAATATGGTTAGGTTATTTATGTGAGTTTTGGTGTTGTGACTTTGGCTTTCATGTTCCCAATGAATTATCAACTTTTTTTTTTTTTGTGTAGTTCAATTCAGAGATTTGAATCTATATGTTCAACTACCCTCCATACTCTACATCTGTTATTAAAAATTGATTTAAATAATAATTTTCCACTTTTGAAGTGCACATAAGCTGTTAGATACACACTCATGAGAAATGAAAGTGATGCTTATATGTTCATAGTTTAGGCTGAATTAAGTTCACAACTTATGACCATATGTATTACGCTTCCTGTGTTGTACCATATGTATATATATATATTTATATATATAATGACTCTCCTAATTACCAAATTCTTGTGACCATATTTTTGTTTTGCGTTTCAGACATGAAGCAGAGTTGGCACAAGCTGCTGCACAACCCCTTCCTGATGAAGATGACGATATTTTTGAGTAATTACGTTTATATGTAAAACTTGGTTGTTGATTTGTCATCGCTTCATTATACAATGTGTTATAGTAGTTTGGTTTTGGTGGATTATTAATACATAATCTAGTGAAATATTCTAGCATTGGACTGACTATTCATATTCAAGGCAAAAACTTCCGAAGAAAATATGCTTCTTGTGTTGATTATTTAAAAAAAATGAAATTAGTCAAATTAGTTAGTAA

mRNA sequence

GCTTGCCATCTGCCTGCCATTAACGACCTCTGTTGGTCCAAATTTCTACGCAGTTCTTCGTGCTATAATCCTCAGTTGCAGAAACTCATTTTCGATGGCGCTGCCGAATCAGGCCACCGTAGATTACCCTAGCTTCAAGCTCGTAATAGTCGGAGATGGTGGAACAGGGAAAACGACCTTTGTTAAACGTCATATAACTGGAGAGTTCGAGAAGAAATATGAACCCACGATCGGAGTTGAAGTGCATCCACTGGACTTCTTTACGAACTATGGCAAGATCAGGTTTTACTGCTGGGACACTGCTGGTCAGGAGAAGTTTGGTGGGCTTAGAGATGGTTACTATATTCATGGGCAGTGTGCCATCATCATGTTTGATGTCACAGCTCGATTAACATACAAAAATGTCCCAACATGGCACCGTGATCTTTGCAGGGTTTGTGAGAACATACCGATCGTATTGTGTGGAAACAAGGTCGATATGAAAACCAGACAGGTTAAAGCAAAGCAGGTGACCTTCCACAGGAAGAAAAATCTACAGTACTATGAAATCTCTGCAAAAAGTAATTACAACTTTGAGAAGCCCTTCTTGTACCTTGCCAGAAAGCTTGCTGGGAACACAGAGCTCCAATTCGTTGAATCACCCGCCCTTGCTCCTCCTGAAGTCCAAATCAACTTGGCCGAACAAGCACAACATGAAGCAGAGTTGGCACAAGCTGCTGCACAACCCCTTCCTGATGAAGATGACGATATTTTTGAGTAATTACGTTTATATGTAAAACTTGGTTGTTGATTTGTCATCGCTTCATTATACAATGTGTTATAGTAGTTTGGTTTTGGTGGATTATTAATACATAATCTAGTGAAATATTCTAGCATTGGACTGACTATTCATATTCAAGGCAAAAACTTCCGAAGAAAATATGCTTCTTGTGTTGATTATTTAAAAAAAATGAAATTAGTCAAATTAGTTAGTAA

Coding sequence (CDS)

ATGGCGCTGCCGAATCAGGCCACCGTAGATTACCCTAGCTTCAAGCTCGTAATAGTCGGAGATGGTGGAACAGGGAAAACGACCTTTGTTAAACGTCATATAACTGGAGAGTTCGAGAAGAAATATGAACCCACGATCGGAGTTGAAGTGCATCCACTGGACTTCTTTACGAACTATGGCAAGATCAGGTTTTACTGCTGGGACACTGCTGGTCAGGAGAAGTTTGGTGGGCTTAGAGATGGTTACTATATTCATGGGCAGTGTGCCATCATCATGTTTGATGTCACAGCTCGATTAACATACAAAAATGTCCCAACATGGCACCGTGATCTTTGCAGGGTTTGTGAGAACATACCGATCGTATTGTGTGGAAACAAGGTCGATATGAAAACCAGACAGGTTAAAGCAAAGCAGGTGACCTTCCACAGGAAGAAAAATCTACAGTACTATGAAATCTCTGCAAAAAGTAATTACAACTTTGAGAAGCCCTTCTTGTACCTTGCCAGAAAGCTTGCTGGGAACACAGAGCTCCAATTCGTTGAATCACCCGCCCTTGCTCCTCCTGAAGTCCAAATCAACTTGGCCGAACAAGCACAACATGAAGCAGAGTTGGCACAAGCTGCTGCACAACCCCTTCCTGATGAAGATGACGATATTTTTGAGTAA

Protein sequence

MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDMKTRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVESPALAPPEVQINLAEQAQHEAELAQAAAQPLPDEDDDIFE

Homology

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BLAST of Sed0015762 vs. NCBI nr
Match: XP_022951841.1 (GTP-binding nuclear protein Ran-3-like [Cucurbita moschata] >XP_023002491.1 GTP-binding nuclear protein Ran-3-like [Cucurbita maxima] >XP_023538292.1 GTP-binding nuclear protein Ran-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 449.1 bits (1154), Expect = 2.2e-122
Identity = 215/221 (97.29%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALP+QATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDMKTRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180
           VLCGNKVD+K RQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTEL FV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180

Query: 181 ESPALAPPEVQINLAEQAQHEAELAQAAAQPLPDEDDDIFE 222
           ESPALAPPEV+INLAEQAQHEAELAQAAAQPLPDEDDD FE
Sbjct: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of Sed0015762 vs. NCBI nr
Match: KAG6585456.1 (GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 449.1 bits (1154), Expect = 2.2e-122
Identity = 215/221 (97.29%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALP+QATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 439 MALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 498

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 499 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 558

Query: 121 VLCGNKVDMKTRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180
           VLCGNKVD+K RQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTEL FV
Sbjct: 559 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 618

Query: 181 ESPALAPPEVQINLAEQAQHEAELAQAAAQPLPDEDDDIFE 222
           ESPALAPPEV+INLAEQAQHEAELAQAAAQPLPDEDDD FE
Sbjct: 619 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 659

[Close]

BLAST of Sed0015762 vs. NCBI nr
Match: XP_022996825.1 (GTP-binding nuclear protein Ran-3-like [Cucurbita maxima] >KAG6598587.1 GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 448.0 bits (1151), Expect = 4.8e-122
Identity = 214/221 (96.83%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDMKTRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180
           VLCGNKVD+K RQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180

Query: 181 ESPALAPPEVQINLAEQAQHEAELAQAAAQPLPDEDDDIFE 222
           ESPALAPPEVQI++A QAQHEAELAQAAAQPLPDEDDD FE
Sbjct: 181 ESPALAPPEVQIDMAVQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of Sed0015762 vs. NCBI nr
Match: KAG7020371.1 (GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 447.2 bits (1149), Expect = 8.2e-122
Identity = 214/220 (97.27%), Postives = 217/220 (98.64%), Query Frame = 0


Query: 2   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 61
           ALP+QATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK
Sbjct: 9   ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 68

Query: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 69  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 128

Query: 122 LCGNKVDMKTRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 181
           LCGNKVD+K RQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTEL FVE
Sbjct: 129 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 188

Query: 182 SPALAPPEVQINLAEQAQHEAELAQAAAQPLPDEDDDIFE 222
           SPALAPPEV+INLAEQAQHEAELAQAAAQPLPDEDDD FE
Sbjct: 189 SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 228

[Close]

BLAST of Sed0015762 vs. NCBI nr
Match: XP_022961762.1 (GTP-binding nuclear protein Ran-3-like [Cucurbita moschata] >XP_023546514.1 GTP-binding nuclear protein Ran-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 446.4 bits (1147), Expect = 1.4e-121
Identity = 213/221 (96.38%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQATV+YPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPNQATVEYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDMKTRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180
           VLCGNKVD+K RQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180

Query: 181 ESPALAPPEVQINLAEQAQHEAELAQAAAQPLPDEDDDIFE 222
           ESPALAPPEVQI++A QAQHEAELAQAAAQPLPDEDDD FE
Sbjct: 181 ESPALAPPEVQIDMAVQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of Sed0015762 vs. ExPASy Swiss-Prot
Match: Q8H156 (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana OX=3702 GN=RAN3 PE=1 SV=2)

HSP 1 Score: 429.5 bits (1103), Expect = 2.3e-119
Identity = 205/221 (92.76%), Postives = 211/221 (95.48%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDMKTRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180
           VLCGNKVD+K RQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  L FV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVQINLAEQAQHEAELAQAAAQPLPDEDDDIFE 222
           ESPALAPPEVQI+LA Q QHEAELA AA+QPLPD+DDD FE
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]

BLAST of Sed0015762 vs. ExPASy Swiss-Prot
Match: P41916 (GTP-binding nuclear protein Ran-1 OS=Arabidopsis thaliana OX=3702 GN=RAN1 PE=1 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 3.4e-118
Identity = 202/221 (91.40%), Postives = 212/221 (95.93%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDMKTRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180
           VLCGNKVD+K RQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  L FV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVQINLAEQAQHEAELAQAAAQPLPDEDDDIFE 222
           E+PALAPPEV I++A+Q ++EAEL QAAAQPLPD+DDDIFE
Sbjct: 181 ETPALAPPEVHIDIADQQKNEAELLQAAAQPLPDDDDDIFE 221

[Close]

BLAST of Sed0015762 vs. ExPASy Swiss-Prot
Match: P41917 (GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana OX=3702 GN=RAN2 PE=1 SV=3)

HSP 1 Score: 422.9 bits (1086), Expect = 2.2e-117
Identity = 201/221 (90.95%), Postives = 210/221 (95.02%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDMKTRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180
           VLCGNKVD+K RQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  L FV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVQINLAEQAQHEAELAQAAAQPLPDEDDDIFE 222
           ESPALAPPEV +++A Q Q+EA+LA AAAQPLPD+DDD FE
Sbjct: 181 ESPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

[Close]

BLAST of Sed0015762 vs. ExPASy Swiss-Prot
Match: A2WSI7 (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica OX=39946 GN=RAN1 PE=2 SV=2)

HSP 1 Score: 422.5 bits (1085), Expect = 2.8e-117
Identity = 200/221 (90.50%), Postives = 210/221 (95.02%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVT+RLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDMKTRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180
           VLCGNKVD+K RQVKAKQVTFHRKKNLQYYE+SAKSNYNFEKPFLYLARKLAG+  L FV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEVSAKSNYNFEKPFLYLARKLAGDGNLHFV 180

Query: 181 ESPALAPPEVQINLAEQAQHEAELAQAAAQPLPDEDDDIFE 222
           E+PALAPP+V I+LA Q QHEAELA AAAQPLPD+DDD+ E
Sbjct: 181 ETPALAPPDVTIDLAAQQQHEAELAAAAAQPLPDDDDDLIE 221

[Close]

BLAST of Sed0015762 vs. ExPASy Swiss-Prot
Match: Q7F7I7 (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAN1 PE=2 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 2.8e-117
Identity = 200/221 (90.50%), Postives = 210/221 (95.02%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVT+RLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDMKTRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180
           VLCGNKVD+K RQVKAKQVTFHRKKNLQYYE+SAKSNYNFEKPFLYLARKLAG+  L FV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEVSAKSNYNFEKPFLYLARKLAGDGNLHFV 180

Query: 181 ESPALAPPEVQINLAEQAQHEAELAQAAAQPLPDEDDDIFE 222
           E+PALAPP+V I+LA Q QHEAELA AAAQPLPD+DDD+ E
Sbjct: 181 ETPALAPPDVTIDLAAQQQHEAELAAAAAQPLPDDDDDLIE 221

[Close]

BLAST of Sed0015762 vs. ExPASy TrEMBL
Match: A0A6J1KLG3 (GTP-binding nuclear protein OS=Cucurbita maxima OX=3661 GN=LOC111496316 PE=3 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.0e-122
Identity = 215/221 (97.29%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALP+QATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDMKTRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180
           VLCGNKVD+K RQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTEL FV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180

Query: 181 ESPALAPPEVQINLAEQAQHEAELAQAAAQPLPDEDDDIFE 222
           ESPALAPPEV+INLAEQAQHEAELAQAAAQPLPDEDDD FE
Sbjct: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of Sed0015762 vs. ExPASy TrEMBL
Match: A0A6J1GIL6 (GTP-binding nuclear protein OS=Cucurbita moschata OX=3662 GN=LOC111454572 PE=3 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.0e-122
Identity = 215/221 (97.29%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALP+QATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDMKTRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180
           VLCGNKVD+K RQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTEL FV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180

Query: 181 ESPALAPPEVQINLAEQAQHEAELAQAAAQPLPDEDDDIFE 222
           ESPALAPPEV+INLAEQAQHEAELAQAAAQPLPDEDDD FE
Sbjct: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of Sed0015762 vs. ExPASy TrEMBL
Match: A0A6J1K7U8 (GTP-binding nuclear protein OS=Cucurbita maxima OX=3661 GN=LOC111491953 PE=3 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.3e-122
Identity = 214/221 (96.83%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDMKTRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180
           VLCGNKVD+K RQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180

Query: 181 ESPALAPPEVQINLAEQAQHEAELAQAAAQPLPDEDDDIFE 222
           ESPALAPPEVQI++A QAQHEAELAQAAAQPLPDEDDD FE
Sbjct: 181 ESPALAPPEVQIDMAVQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of Sed0015762 vs. ExPASy TrEMBL
Match: A0A6J1HAZ9 (GTP-binding nuclear protein OS=Cucurbita moschata OX=3662 GN=LOC111462434 PE=3 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 6.8e-122
Identity = 213/221 (96.38%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQATV+YPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPNQATVEYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDMKTRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180
           VLCGNKVD+K RQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180

Query: 181 ESPALAPPEVQINLAEQAQHEAELAQAAAQPLPDEDDDIFE 222
           ESPALAPPEVQI++A QAQHEAELAQAAAQPLPDEDDD FE
Sbjct: 181 ESPALAPPEVQIDMAVQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of Sed0015762 vs. ExPASy TrEMBL
Match: A0A068PVW7 (GTP-binding nuclear protein OS=Citrullus lanatus OX=3654 GN=CLRan2 PE=2 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 2.0e-121
Identity = 213/221 (96.38%), Postives = 216/221 (97.74%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDMKTRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180
           VLCGNKVD+K RQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGN EL FV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180

Query: 181 ESPALAPPEVQINLAEQAQHEAELAQAAAQPLPDEDDDIFE 222
           ESPALAPPEVQI+LA QAQHEAELAQAAAQPLPDEDDD FE
Sbjct: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of Sed0015762 vs. TAIR 10
Match: AT5G55190.1 (RAN GTPase 3 )

HSP 1 Score: 429.5 bits (1103), Expect = 1.7e-120
Identity = 205/221 (92.76%), Postives = 211/221 (95.48%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDMKTRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180
           VLCGNKVD+K RQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  L FV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVQINLAEQAQHEAELAQAAAQPLPDEDDDIFE 222
           ESPALAPPEVQI+LA Q QHEAELA AA+QPLPD+DDD FE
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]

BLAST of Sed0015762 vs. TAIR 10
Match: AT5G20010.1 (RAS-related nuclear protein-1 )

HSP 1 Score: 425.6 bits (1093), Expect = 2.4e-119
Identity = 202/221 (91.40%), Postives = 212/221 (95.93%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDMKTRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180
           VLCGNKVD+K RQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  L FV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVQINLAEQAQHEAELAQAAAQPLPDEDDDIFE 222
           E+PALAPPEV I++A+Q ++EAEL QAAAQPLPD+DDDIFE
Sbjct: 181 ETPALAPPEVHIDIADQQKNEAELLQAAAQPLPDDDDDIFE 221

[Close]

BLAST of Sed0015762 vs. TAIR 10
Match: AT5G20020.1 (RAS-related GTP-binding nuclear protein 2 )

HSP 1 Score: 422.9 bits (1086), Expect = 1.5e-118
Identity = 201/221 (90.95%), Postives = 210/221 (95.02%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDMKTRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180
           VLCGNKVD+K RQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  L FV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVQINLAEQAQHEAELAQAAAQPLPDEDDDIFE 222
           ESPALAPPEV +++A Q Q+EA+LA AAAQPLPD+DDD FE
Sbjct: 181 ESPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

[Close]

BLAST of Sed0015762 vs. TAIR 10
Match: AT5G55080.1 (ras-related nuclear protein 4 )

HSP 1 Score: 304.3 bits (778), Expect = 8.0e-83
Identity = 144/212 (67.92%), Postives = 172/212 (81.13%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ  VD P+FKL+IVGDGGTGKTTF+KRH+TGEFE   EPT+GV+++PLDFFTN G
Sbjct: 1   MALPNQQNVDLPTFKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRF CWDTAGQEK+ GL+D YYIHGQCAIIMFDVTAR TY N+  W+RDL RVC+NIPI
Sbjct: 61  KIRFECWDTAGQEKYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDRWYRDLRRVCKNIPI 120

Query: 121 VLCGNKVDMKTRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180
           VLCGNKVD+ +RQ+K K V++HRKK LQYYE+SAK+N NFEKPFLYLAR++AG+ +L FV
Sbjct: 121 VLCGNKVDVPSRQIKPKHVSYHRKKCLQYYEMSAKNNCNFEKPFLYLARRIAGDAKLSFV 180

Query: 181 ESPALAPPEVQINLAEQAQHEAELAQAAAQPL 213
           ES     PE QI+  +    +    +A  QPL
Sbjct: 181 ES-----PEAQIDNLDVESLQLLTVEAGTQPL 207

[Close]

BLAST of Sed0015762 vs. TAIR 10
Match: AT4G39890.1 (RAB GTPase homolog H1C )

HSP 1 Score: 102.4 bits (254), Expect = 4.6e-22
Identity = 59/164 (35.98%), Postives = 87/164 (53.05%), Query Frame = 0


Query: 14  FKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGKIRFYCWDTAGQE 73
           FKLV +GD   GKT+ + R +  +F+  Y+PTIG++      +     +R   WDTAGQE
Sbjct: 10  FKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69

Query: 74  KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDM-K 133
           +F  L   Y      AI+++DV+ R T+ N   W  D+ R     N+ IVL GNK D+ +
Sbjct: 70  RFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVE 129

Query: 134 TRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAG 174
            RQV   +     K+  + + E SAK N+N +  F  +A  L G
Sbjct: 130 KRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPG 173

The following BLAST results are available for this feature:

BLAST of Sed0015762 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951841.1	2.2e-122	97.29	GTP-binding nuclear protein Ran-3-like [Cucurbita moschata] >XP_023002491.1 GTP-...	[more]
KAG6585456.1	2.2e-122	97.29	GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022996825.1	4.8e-122	96.83	GTP-binding nuclear protein Ran-3-like [Cucurbita maxima] >KAG6598587.1 GTP-bind...	[more]
KAG7020371.1	8.2e-122	97.27	GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022961762.1	1.4e-121	96.38	GTP-binding nuclear protein Ran-3-like [Cucurbita moschata] >XP_023546514.1 GTP-...	[more]

BLAST of Sed0015762 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H156	2.3e-119	92.76	GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana OX=3702 GN=RAN3 PE=1 S...	[more]
P41916	3.4e-118	91.40	GTP-binding nuclear protein Ran-1 OS=Arabidopsis thaliana OX=3702 GN=RAN1 PE=1 S...	[more]
P41917	2.2e-117	90.95	GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana OX=3702 GN=RAN2 PE=1 S...	[more]
A2WSI7	2.8e-117	90.50	GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica OX=39946 GN=RAN1...	[more]
Q7F7I7	2.8e-117	90.50	GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RA...	[more]

BLAST of Sed0015762 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KLG3	1.0e-122	97.29	GTP-binding nuclear protein OS=Cucurbita maxima OX=3661 GN=LOC111496316 PE=3 SV=...	[more]
A0A6J1GIL6	1.0e-122	97.29	GTP-binding nuclear protein OS=Cucurbita moschata OX=3662 GN=LOC111454572 PE=3 S...	[more]
A0A6J1K7U8	2.3e-122	96.83	GTP-binding nuclear protein OS=Cucurbita maxima OX=3661 GN=LOC111491953 PE=3 SV=...	[more]
A0A6J1HAZ9	6.8e-122	96.38	GTP-binding nuclear protein OS=Cucurbita moschata OX=3662 GN=LOC111462434 PE=3 S...	[more]
A0A068PVW7	2.0e-121	96.38	GTP-binding nuclear protein OS=Citrullus lanatus OX=3654 GN=CLRan2 PE=2 SV=1	[more]

BLAST of Sed0015762 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55190.1	1.7e-120	92.76	RAN GTPase 3	[more]
AT5G20010.1	2.4e-119	91.40	RAS-related nuclear protein-1	[more]
AT5G20020.1	1.5e-118	90.95	RAS-related GTP-binding nuclear protein 2	[more]
AT5G55080.1	8.0e-83	67.92	ras-related nuclear protein 4	[more]
AT4G39890.1	4.6e-22	35.98	RAB GTPase homolog H1C	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002041	Ran GTPase	PRINTS	PR00627	GTPRANTC4	coord: 130..148 score: 79.35 coord: 168..190 score: 70.07 coord: 74..92 score: 89.88 coord: 94..115 score: 86.19 coord: 27..41 score: 89.49
IPR002041	Ran GTPase	PANTHER	PTHR24071	RAN GTPASE	coord: 1..199
IPR002041	Ran GTPase	PROSITE	PS51418	RAN	coord: 7..171 score: 29.750233
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..170 e-value: 9.0E-9 score: -6.3
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..171 e-value: 1.6E-50 score: 170.9
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 5..199 score: 10.008095
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..174 e-value: 7.4E-19 score: 78.6
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..174 e-value: 8.0E-29 score: 111.8
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..199 e-value: 4.1E-138 score: 474.8
None	No IPR available	PANTHER	PTHR24071:SF19	GTP-BINDING NUCLEAR PROTEIN	coord: 1..199
None	No IPR available	PROSITE	PS51419	RAB	coord: 8..199 score: 20.070358
None	No IPR available	CDD	cd00877	Ran	coord: 14..179 e-value: 4.57847E-129 score: 358.152
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 14..164 e-value: 1.8E-24 score: 84.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 5..199 e-value: 2.3E-65 score: 221.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 14..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015762.1	Sed0015762.1	mRNA
Sed0015762.2	Sed0015762.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0000054	ribosomal subunit export from nucleus
biological_process	GO:0006913	nucleocytoplasmic transport
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding