Sed0015742 (gene) Chayote v1

Overview


Name	Sed0015742
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription initiation factor TFIID subunit 12
Location	LG14: 3268550 .. 3277491 (+)
RNA-Seq Expression	Sed0015742
Synteny	Sed0015742

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGCCATTTGCAGAATTTTTCACCTTCGATTTTCACTTCAATGGATTCATCGTCTCAGTCACCGTCCGAACCGCCGCCGGCAGCTCCTCCGCCTCATCCTCCACCGGAATCAACCGTCTCCTCCGCCGCAACCTCCGCCTTGGCTCCGCCGCAATCGTCCCAAAATCCAAACCCTAACATCAACAACCAAAACCCCAATTCCCAACAGCAACAATCTCTTCCCACATTGACCGGAACCTGGCAACCGCCCTCGCATTTCTCTCATTTTTCTTCGCCATCTGCTTCTTCTGCGGTTCCTTCGCCTCGCCCTGTTTCCGCTTCTTCTCCATCTCAAAGAGGCGGCATCTCCATCGGCGTTCCGGCGCACCAGGCGAATCCCTCTCATCAGCCTGCTATGTTTTCTGCATCTTATGGCCAGCATTTTGGTGGCTTGGGCCGCGGTGGCGTCGGCGTCGTCTCGGAGCCGGCCTCTAATGCAACTCCTCAGGTGTGGTGTTTTTTTTTACAATGGATTTTTACTTATCTAACGACTATAAAGCAGACCTAAAGAATTACAATGTTATCACCATGTTATTACAGCTATATCCTATTCCGTTGTATTGTACCCTGTTAGTTTGTTATCTACTTTATTACCATGATTTGCCTGTCTAAATTTAGTTAAACTTGAAGCAATCGTATTGTAATTTGTAATGGAAGTAACGTGGTGAAGGATAGAACAAAAAGTTAGTAACATTATCTATTTTGTTAGTTATGTTGGATAAACCAATTAGTATTTGATTTCGAGGTAAGTTGATGGGCATTTAAGAACACCATATTAAAATGTTATCACCATGAATAAACCATCATGGATTCTTCTAATGGTCAAGAGGGTTTTGCCTAACGCTGTAACTTAGAGGTATTGAGTTTTATCCACGATGGTCATCTATTTCCTTAACAACCAAATGTAGCAAGGATTAGACGATTGTCTTGTGGAAATAGGTGAGGCCCTCGTAAGTTGGCGTAGACACACAATATACATATAGCATACCATTAATTACAATGAAATAATTTTAAAAGATACAATGAAATGAAAATCCCGTAATTTAGAAATATTAAGTTAAAAATTGTAACATATCATAGTCTACCCTATTGGCTATTGGTCTATAAGGGCATTGGGAATCATTAAGTGCTTAGAGGGAATGAGTTCAATTCATGGTTACCACCTTCTTTGGAATTAATTTCCTATAAGTTTTATTTGCAACCAAATGTAATAGGGTCAAATAGTTGTTCCGTGAGATTATTTGAAATTTTTATAAGCTCAAACAAAAAAAAAAGGTAAAAATCGTAATAAAATGAGTCTTAATTGACCACTTAATTTCATAAGTCATAAAGGTGCTTTTATTAAAACTGTGCAGTTTCTTGAACATCAAAGCCGAATGTTAGTTAATTTAGTTTTTCTTTTTTCTTTCTTCTTTCCTACAGCACCCAGTTTGATTTTTTGGTTTAAACTTTATAATACAAGAGATGGAAAATTCCCCCATCATTTTTAACAAAGAATATTGACATTCTAAAAAAATGTAATAGACATACCCTCTCTTCCTCTTGTAACTCTTTCATACATCAACGAAATGGTTTTCGTTTCCTATTTTAAAAAAAAAGAAATTCTAAATGTCGAATTACTGTTCTGGCTTATTTTCCTGTTGAGGTATGAGCAGAAATACAGAATTTATATCAAAATTTCCTATCCTTCTTCACTATCTGTAATTGCTGTTGAAAAAGAGAGTGATACCGAAGTCTAGTTATAAAACTTGTGTAGCATTTTATATGCTCAGTTTATGCTTATCGATTACATCAGACTTGAATGCTCTTGCCTCTTGTGGTAGGAAAAGTTGTCTGCTGCTTTATTTGACTGTTGTTTGAAACCCAGGTGAGACCTCCTATGCAAGGAATGCAGGGATTGGGAATGTTGGGTTCGAGTGGTTCTAGTTCTCAAATGTTGCAGAGGCCTGTGCAACCTTCTCTCAGGCCGCCATCTACCCCAAGCTCAGCTTCCCAAGTTAGTAATCTAGCTGAAAAAAATTATTCATCAAGTATTATTATTCTAGTTTCTATTGAGATCCACATGCTTGGTTAAAATGTAACTGCAACTAAATGTATATTTGGTAGTCCACATCGCAAGAAAAGTGTTAGTTGATATAATTAAATTTACCCCAATCAATCAGCTTAGGCTTTTGGATTGATGGGTGGTTTAGCATAATTTAACATGGTATCAGAGCAGGAGGTTATGAGTTCGAATCCCTTCCAAGTCGTTTCCTCCCCATTTAAAATCAAATTCCACTTGTAGGGCATTTCTCAAATTTCAAAACCCACAAGTGAGGGGGAGTGTTGGTTGATATAATTAAATTTACCTCAATCCATCAGCTTAGGCTTTTGGATTGATTGGTAGTTTAACATAATTCAACAAAAAGGCTTTATCTATTTTGTGATGCCGTGAATTATCTCAATTCACTATTATTTTGCTGCTCATTTTTTTTTAATCTTTAAGATCTTGGAAACCTTCGTATTAGAAATTATAACGGGAGTTGCTTTTGCATGCTATAAACAACTCATGGCCCTATAAGTTTATTCATCTTCCGTGGGATGGGACGGAACCAAAGTTGTCGTAGAGAATGGGCTTCTCATTTGGTTAGGTGGGAGATTATGTTGCATCTAGTTTACTTGTGAAAACTGAAAAGGTCCTTTTTGTATCAACGTGCTTTGTGCATTATGATGGTATATGTCTTAACTGTGGCGTTTAATAAACTTTTATATTCAATTGCATTTTCTTCTTGCTGCTACATGCGTCCAATTGAATTGTCTATGGAAACTTAGTTTTACTAAACACTAAGTTTTGCTAAACTTTCCTAAACTTCAGACTTTCCAAGGCCATGGTCTTATGAGAGTACCATCAAGCTCTCCAAGTTCTTCATTGCCAAGTACATCACAAGGCATGCAACCAGCTAATCAACCATGGTTGCCATCTACTTCACAAGGAAAACCACCACTTCCAACACCTTCATATAGACCACATGCAAGCTCAACTGCCATGCAGCAAAGATCACATATCCCTCAACAACAGAACCACCCCTTAGCTCCAGCTTCTCAGCCACAACAAATTTCATCTGCCCCTCAACAACAACCTGCTGCTCATCTCCAGCAGGAGCATTTTACGCAACAATTCCAACCACCAAGGAGCTCACAAGGTTTACCCCATCAACAGCAGGCTGCAAAAGCTCAGGGGTCAGCAAACCAGAAGGCTTTTCCCCTTGCACCTGCACAAACTAATAATACACAGACAATGACCCAGAGCAGAGCTATAACTGCAGAAGTTGAAGAACCCTGTAGTAGAATACTCAGCAAAAGAAGTATTGGTGATCTGGTTAACCAAGTTAGTCATTTCATTGCCTTTGTTTAATTTATTATTTTCTTCTTATGAAATCATAAGACTGTGGGAATTTAGTTTAGAATAGCTCAACTGGTTCAACGTGATTGAATCGGTTTTTTTGTCCCTTTATGGTTGATTCTCTTATTGATACTCTGCCTTCTTTTTTTGTATTTTTATTTATTTTTTATTGTAGAATATAGATGACGGCCTTAACAATTGGTTAAATTTGGGAAACATCTATATTTGTATGTCCATATGATTATGTAAGTTGGTTCCAATAGTTGAAGAACATATGCAAGAGTCAACATATATTATTTATTTGACTTTGTATCGGTGTCACTCTATCCCCCTTTTTGTAGACACAACTTAACCACTTTAATATCTCAGTGGCATAGTCTCATATAATGTCTCGATAGGCTGTAACTTTTCATACATCAATGAATGTGTTTTGTTTCCTATAAATTTTTTTATAAACATATTGTACTTGAAGTTATGGATGCATGCAGCCCTCCTTACGGATATCAAAATATTTATTCTAGAGTTTTGTGAAAGTTTTCATTGGCTAAAATGACAACAAATTTGATCTGATGTTTGCCATTTTTTCTATATTACCCTTTTTTTATCTTGTTAAGTTGTAAGTGATAATAATTTGGATTATAGTGCACAATGGATTCCCCGTTTTAAAAAAGGATTATAGTGCACAATGGACAGGATTAAGATTCAAACAGTTTTGGAGTTGTATATGCGATTAATTTAATTTATGCAGATTTTATTTGGCTTTAATTCTGGTCTTGGGTCCCAAGGAATACTTTACTTCTGTTATATGGTCCCTCTTTTTTTTTTGGCAGATTGATCCGTCTGAGAGATTGGATCCTGAAGTTGAAGATGTACTTGTTGATCTGGCAGAAGAGTTTGTTGAGTCTGTGAGTAGTTAAATTTTATGCTATCCATATTTATTCGATTAATTTTTTTTTTCTTTTCTCACTTTTGTTTTTCAAGTTTTTTATTGAATTAGATTTTGAATTTTTACTTTTAAGTCTCATTAAATAATGAGGATGAAAAATGGACTTTCCTTATATAAAAGAAAAAGAAAGGCTGGATTAGTTAGCGGCGTTGGCCAAAGTGTTGTGTATGTTGTGTTGCTATATTATATTCATGTTATTTTCTTCTTTTTAATGAAATTCGCAGTCATGTGATTGTTTCATCTTATCCTCAGATGTCAGAATAGACTATTTTGCTATACTTCTCTCCTAGTTTGAAATTAATTAATACCTTTTGTTGTTTGTTCAGATTACAACATTTGGTTGCTCATTAGCAAAACATCGAAAATCATCTACGTTAGAGGCGAAGGACATCCTTCTACATCTTGGTTGGTTATTAGCAACAGCCAATAGCCATGTTTAACACTTGAACCCTTTGGATATATTACATGCTCATTTTGACTTATTATACTTCTGTGCAGAAAAAAACTGGAATTTAACACTTCCTGGGTTTGGTAGTGATGATATTAAGATATTCAGAAAACCGGTACATATATTATTGGTGGCATAATAGGTTTCTTCTTGTCAATGCTGGACAAAACTTGATGTTTGATTTTTCTTCATAAAATTTTTATTTGAAAATTTTGCAGGTTACAAATGATTCTCACAGAGAGCGTCTTGCAGCAGTGAGTGGCCCCCTCTCTATGATTTATGGAGCTTTTGAAATGTGATACAGGATCAAAAGTAACATTATACTTCATTCAATGTATCCATTTTTTTCGGTTTTATCTTGGCAGGTAAAAAAATCTATGGCGGCAAGTGAGATGGCAAATACCAGGAGTTCTGCCGGACAGGCCGCTGGAAATAACAAAAGCAGTCTGGCAAAAACACCTGCAGTTTAGCTGCTCACCAAAACCTCTACATACGTGAATTTGGATGGGGTGTTTAATTTTTTTAATGGCACTGGAGTAAAAAAGCTACTTAGTTGAAGAAGGTATGCAGCAAAGTGTTTATGTTTAGCATTTAATCAGCAGATACTGATATTTGCTAACATGAAATTTTTTATATTGAGCATTGTTCTTCATTGCATGTTTATAGAAGTATAGAGGTTAAGGACTTGCACAATACCTTACTCTTTAGTATGCCCAAGAGGCAGCCCAACTGTTGAGGCAAAGGACTTCAAAGCATGCTTCTTTGAGAGATCCCTGGTTCGAGGCGGCTGAAAAGCGCTTAAACTAGAATACCCTTCGAAGTATCCCGGTGCCACAGTCTAGGGACGGGTTAGTGGTGTCCTGAGTATAGGGGAGTGAAGCTTCGATTTCCCGGTTTTCAAAAAAAAAAAAAAAAGTATGCCCAAAGGAGAAGATTGTAGAATCATTTTATACCTTAACCAAGTGGCCTAGTAGACAAAAAGACCTTGGACAGCTAAGAGGTTAGCTGATTAGTTCCATCTATGGTGGCCACTTACTTTGGTATTAATTTTGTATGGTTTTTCTTGACATTTAAATGTTGTAGGGTCAGACGTTATGTTCCGTGATATTAGTCGAGATGGTGCAAGTTGGCCTGTACAGTCACGAATAAAAAAATATCATTTTTATACCATTCTGTCTATTCTCTAATCTTGAAAAAGATAATTTTGTTATCTTGGAAGAATCAACATATATCGAAGGGAGGAAGGTTGACTCTCATCAAAGCCACTCTTGCTAATCTCCCCACATACTTTATGTCGGTGTTTAAAATGCCTAGTAGAGTTGTAGCTACCTTGGAAAGAATGATTAGAAACTTCCTCTGGAAGGGGTGTATTGATGACAAAGGGATGCATCTCGTTAAATGAGATACTATTACCCTCCCACATTTACAAGGGGGCCTTGATATTGACAAAATCAAACCCAAGAACGAGGCCCTTCTTCCAAAGTGGATTTGGAGATATTATGTTGAAGAACGAGAAGGGCAACATTGGCTTCGACTAAAGGTCCATGGAAGTACATCCTTCCTCTTGCCCTCATGATTTAGGATCGAATCTCCTATAAAGTGAAGAATGGTGAGAGCACTCTTTTTTGGAAGGATAAATGGCTTAATGATTCCCTTCTGAACCATGCTTTCCCTCTTCTTTTCCACATCTCCAAAGAAAAAGATATGACTGTTAGTAAGGCATGGGAGGTTGAAAGGAAAATCTGGAACTTGAGGCTTAGAAGGAACCTGAAAGATGATGAACTAGATGAGTTTTGTTCTCTCCAGAATCAGCTTGATGGAGTGACTCTGGCCAAGGGTAGGGACTGTTGCATTTGGAACCTGGAACCTAGTGGAAAGTTCACTATCCATTCCCTACTCAAGGATCTTAAAGCCATTGTATCTGCTACAATACCTGAGGTACAGATTTATAGTTCTATTTGGAAAGGGAAATGCCCGAAGAAGGTGAAATTCTTCCTTTGGGAATTGAGTCACGGGGCCATCAACACCAATGATCGGCTCCAACGTAGACTTCCACATATGACTCTCTCTCCACAATGGTGTACCATCTGTTATAAATCCACCGAAACTCAACCACATCTAATGATTTCTTGTACTTATGCAAATGCATTCTCGGATTATATTTGGGGGCATTCTCATGGTATTTGGCCATGCCTAATGATCCTCACGAGCTCCTTATATTATCCCTTTCGAACCACCCATTCAAAGAAGAAAAGAAAAAATCATTATGGGAAAACTTTATCAAAGCATATTGTTGGAATATTTGGATTGGGCGGAATCGCAGGATCTTCAAAGGAACATCTAATCACTTCGATCGGTTCATAGACAATATTATTTATATGGTCGTATCTTGGTGTAAAATGTCTCCATTATTTCATGATTATAGTTACGATATTCTTATTAATAGTTGGAGATCTTTATTATAAAGAACTATGTATTTTGTAATTTCATATTATCAATGAAATTGTTTCTTGTCCAAAAAAGAAAAAGATAATTTGGTTAACTTCTGTAATTTTCTTATGAAATATGTTTATTTTGAGTATATCAGTTCTAGTGGCTGAACAATGGATCTAGATTTAGTCTATTACCGGTAGGACATGTTTGAGGTTCAAAGGTTTTTTTTTTTTTGGATAAGAAACAATTTCATTAACATATGAAATTAAGTGTTGCAAGGATAAGAGGGAATTACAAAAGAGCTCTCCAACTATTTGTAAGACTAGTAAAACTATAATCATGAAATAGAGGAGAGAGTATTGAATAGGTCTCCGACTCATATTCAACAATTCATTTTAATGTAGGAACAATTTAAGTAGTTTGGTTGTACTTTTTTTTTTCTTGGTCTTGGGCAATTTACGTACACTTCAACTATTCTCGTCTTGACCCTACTATATTTGGTTGTCAAGTAAGCCTATAGGAAATTAATTCTTAGGTAATTAACCATCATGTATTATCATTTAACTCATCATCTTTTAGTTCTAAAAAACCATCGACCACTAGGCTATTCCACGATGTTTATAATTCCAAAACTTATACTAAAACGTCTTTCTAGATTGAATTTTCAAGATGGGAAAGCAAAAAGAACGAGTAATTTTGATTTATATACGTATTATATATTTTGATATCTGTGAGTGTCCGAGCTAGTTTACGTGTACCTTGACTATTTTCACGGGACATATCGTCTGATCCTACAACATATGAATGTCAAGAAAACTTGTTGGAAACTAATTTTTAAGTGATACCATATATTGAACCTATCACCTCTTAGTTAATTGTAAGAGTAATTTTGATGTATGGTGGCCTAAATGGAAAAAAAGATTGAAATTTCAAAATCTGAGGTTGGTAAAAATGAGATTACCTTGAATGAATCATCTCATGAAAGTTTGGAGCCTCTAACCATATCATACCACCATGGGAAATGCTTTTATAGAAAATAATCCTTCACCAAAATTGTTTATTGCCATGCCATCTTTTTAGTAGCACAGTATTACTTACATGCTGATAAGATTTGTAGTGATTGTATAATCTGGGTTCTATCATATGCACACCATGTCAACTATCACTTGCTAAATTGTTGAGGTTGATATCTGGCTCTTGCGTGTCTCTCATACATGCAGGTGAAGTTCTTACCATAATTTGAAAAAAGACAACATTAATTGCAGTATGAGCTGAAATTCTGCCTTGCTTCACATTTGTACCACTGTCCAGTAGTCAATGCTTTGGTTTGCCAATTCAACCACCAACTTGTATGGAAACAAAGCAAACTTTACCAGGTACCTTCAATTAAGTTCTACATTTTGAGAAACCTTCCATGTAGGGATGTGCTCGACTTCTCGTGTTTGCAGTTTGTCACGACTCACCCATACACGAGTGCGGTCGCATGTGTAGACTTTCTCTAAAACAAAGGAAGTTGTAAATTTTTTATTTGGACTTCTCGATTTGTAAATGGGGAATATGGATTTGCCAACTTGATGGAATGTATATCAACAATCTTCATCCTTCTTAGGTTTAAATCTTTCATCTATTTAAATCATGGATCAGGTTTCGAAAATATGGTGTATTGTTGATCTTTAAATCCTTTGTTTTTCT

mRNA sequence

ATTTGCCATTTGCAGAATTTTTCACCTTCGATTTTCACTTCAATGGATTCATCGTCTCAGTCACCGTCCGAACCGCCGCCGGCAGCTCCTCCGCCTCATCCTCCACCGGAATCAACCGTCTCCTCCGCCGCAACCTCCGCCTTGGCTCCGCCGCAATCGTCCCAAAATCCAAACCCTAACATCAACAACCAAAACCCCAATTCCCAACAGCAACAATCTCTTCCCACATTGACCGGAACCTGGCAACCGCCCTCGCATTTCTCTCATTTTTCTTCGCCATCTGCTTCTTCTGCGGTTCCTTCGCCTCGCCCTGTTTCCGCTTCTTCTCCATCTCAAAGAGGCGGCATCTCCATCGGCGTTCCGGCGCACCAGGCGAATCCCTCTCATCAGCCTGCTATGTTTTCTGCATCTTATGGCCAGCATTTTGGTGGCTTGGGCCGCGGTGGCGTCGGCGTCGTCTCGGAGCCGGCCTCTAATGCAACTCCTCAGGTGAGACCTCCTATGCAAGGAATGCAGGGATTGGGAATGTTGGGTTCGAGTGGTTCTAGTTCTCAAATGTTGCAGAGGCCTGTGCAACCTTCTCTCAGGCCGCCATCTACCCCAAGCTCAGCTTCCCAAACTTTCCAAGGCCATGGTCTTATGAGAGTACCATCAAGCTCTCCAAGTTCTTCATTGCCAAGTACATCACAAGGCATGCAACCAGCTAATCAACCATGGTTGCCATCTACTTCACAAGGAAAACCACCACTTCCAACACCTTCATATAGACCACATGCAAGCTCAACTGCCATGCAGCAAAGATCACATATCCCTCAACAACAGAACCACCCCTTAGCTCCAGCTTCTCAGCCACAACAAATTTCATCTGCCCCTCAACAACAACCTGCTGCTCATCTCCAGCAGGAGCATTTTACGCAACAATTCCAACCACCAAGGAGCTCACAAGGTTTACCCCATCAACAGCAGGCTGCAAAAGCTCAGGGGTCAGCAAACCAGAAGGCTTTTCCCCTTGCACCTGCACAAACTAATAATACACAGACAATGACCCAGAGCAGAGCTATAACTGCAGAAGTTGAAGAACCCTGTAGTAGAATACTCAGCAAAAGAAGTATTGGTGATCTGGTTAACCAAATTGATCCGTCTGAGAGATTGGATCCTGAAGTTGAAGATGTACTTGTTGATCTGGCAGAAGAGTTTGTTGAGTCTATTACAACATTTGGTTGCTCATTAGCAAAACATCGAAAATCATCTACGTTAGAGGCGAAGGACATCCTTCTACATCTTGAAAAAAACTGGAATTTAACACTTCCTGGGTTTGGTAGTGATGATATTAAGATATTCAGAAAACCGGTTACAAATGATTCTCACAGAGAGCGTCTTGCAGCAGTAAAAAAATCTATGGCGGCAAGTGAGATGGCAAATACCAGGAGTTCTGCCGGACAGGCCGCTGGAAATAACAAAAGCAGTCTGGCAAAAACACCTGCAGTTTAGCTGCTCACCAAAACCTCTACATACGTGAATTTGGATGGGGTGTTTAATTTTTTTAATGGCACTGGAGTAAAAAAGCTACTTAGTTGAAGAAGGTGAAGTTCTTACCATAATTTGAAAAAAGACAACATTAATTGCAGTATGAGCTGAAATTCTGCCTTGCTTCACATTTGTACCACTGTCCAGTAGTCAATGCTTTGGTTTGCCAATTCAACCACCAACTTGTATGGAAACAAAGCAAACTTTACCAGGTACCTTCAATTAAGTTCTACATTTTGAGAAACCTTCCATGTAGGGATGTGCTCGACTTCTCGTGTTTGCAGTTTGTCACGACTCACCCATACACGAGTGCGGTCGCATGTGTAGACTTTCTCTAAAACAAAGGAAGTTGTAAATTTTTTATTTGGACTTCTCGATTTGTAAATGGGGAATATGGATTTGCCAACTTGATGGAATGTATATCAACAATCTTCATCCTTCTTAGGTTTAAATCTTTCATCTATTTAAATCATGGATCAGGTTTCGAAAATATGGTGTATTGTTGATCTTTAAATCCTTTGTTTTTCT

Coding sequence (CDS)

ATGGATTCATCGTCTCAGTCACCGTCCGAACCGCCGCCGGCAGCTCCTCCGCCTCATCCTCCACCGGAATCAACCGTCTCCTCCGCCGCAACCTCCGCCTTGGCTCCGCCGCAATCGTCCCAAAATCCAAACCCTAACATCAACAACCAAAACCCCAATTCCCAACAGCAACAATCTCTTCCCACATTGACCGGAACCTGGCAACCGCCCTCGCATTTCTCTCATTTTTCTTCGCCATCTGCTTCTTCTGCGGTTCCTTCGCCTCGCCCTGTTTCCGCTTCTTCTCCATCTCAAAGAGGCGGCATCTCCATCGGCGTTCCGGCGCACCAGGCGAATCCCTCTCATCAGCCTGCTATGTTTTCTGCATCTTATGGCCAGCATTTTGGTGGCTTGGGCCGCGGTGGCGTCGGCGTCGTCTCGGAGCCGGCCTCTAATGCAACTCCTCAGGTGAGACCTCCTATGCAAGGAATGCAGGGATTGGGAATGTTGGGTTCGAGTGGTTCTAGTTCTCAAATGTTGCAGAGGCCTGTGCAACCTTCTCTCAGGCCGCCATCTACCCCAAGCTCAGCTTCCCAAACTTTCCAAGGCCATGGTCTTATGAGAGTACCATCAAGCTCTCCAAGTTCTTCATTGCCAAGTACATCACAAGGCATGCAACCAGCTAATCAACCATGGTTGCCATCTACTTCACAAGGAAAACCACCACTTCCAACACCTTCATATAGACCACATGCAAGCTCAACTGCCATGCAGCAAAGATCACATATCCCTCAACAACAGAACCACCCCTTAGCTCCAGCTTCTCAGCCACAACAAATTTCATCTGCCCCTCAACAACAACCTGCTGCTCATCTCCAGCAGGAGCATTTTACGCAACAATTCCAACCACCAAGGAGCTCACAAGGTTTACCCCATCAACAGCAGGCTGCAAAAGCTCAGGGGTCAGCAAACCAGAAGGCTTTTCCCCTTGCACCTGCACAAACTAATAATACACAGACAATGACCCAGAGCAGAGCTATAACTGCAGAAGTTGAAGAACCCTGTAGTAGAATACTCAGCAAAAGAAGTATTGGTGATCTGGTTAACCAAATTGATCCGTCTGAGAGATTGGATCCTGAAGTTGAAGATGTACTTGTTGATCTGGCAGAAGAGTTTGTTGAGTCTATTACAACATTTGGTTGCTCATTAGCAAAACATCGAAAATCATCTACGTTAGAGGCGAAGGACATCCTTCTACATCTTGAAAAAAACTGGAATTTAACACTTCCTGGGTTTGGTAGTGATGATATTAAGATATTCAGAAAACCGGTTACAAATGATTCTCACAGAGAGCGTCTTGCAGCAGTAAAAAAATCTATGGCGGCAAGTGAGATGGCAAATACCAGGAGTTCTGCCGGACAGGCCGCTGGAAATAACAAAAGCAGTCTGGCAAAAACACCTGCAGTTTAG

Protein sequence

MDSSSQSPSEPPPAAPPPHPPPESTVSSAATSALAPPQSSQNPNPNINNQNPNSQQQQSLPTLTGTWQPPSHFSHFSSPSASSAVPSPRPVSASSPSQRGGISIGVPAHQANPSHQPAMFSASYGQHFGGLGRGGVGVVSEPASNATPQVRPPMQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTPSSASQTFQGHGLMRVPSSSPSSSLPSTSQGMQPANQPWLPSTSQGKPPLPTPSYRPHASSTAMQQRSHIPQQQNHPLAPASQPQQISSAPQQQPAAHLQQEHFTQQFQPPRSSQGLPHQQQAAKAQGSANQKAFPLAPAQTNNTQTMTQSRAITAEVEEPCSRILSKRSIGDLVNQIDPSERLDPEVEDVLVDLAEEFVESITTFGCSLAKHRKSSTLEAKDILLHLEKNWNLTLPGFGSDDIKIFRKPVTNDSHRERLAAVKKSMAASEMANTRSSAGQAAGNNKSSLAKTPAV

Homology

[Close]

BLAST of Sed0015742 vs. NCBI nr
Match: XP_022926039.1 (transcription initiation factor TFIID subunit 12 [Cucurbita moschata])

HSP 1 Score: 723.0 bits (1865), Expect = 1.7e-204
Identity = 416/513 (81.09%), Postives = 445/513 (86.74%), Query Frame = 0


Query: 1   MDSSSQSPSEPPPAAPPPHPPPESTVSSAATSALAPPQSSQNPNPNIN-----NQNPN-- 60
           MDSSSQSPSE PPAA  PHPPP +TVSSA TS  APPQSS N NPNIN     NQNPN  
Sbjct: 1   MDSSSQSPSE-PPAASSPHPPPATTVSSATTSVAAPPQSSPNANPNINPSSFQNQNPNSK 60

Query: 61  ---------SQQQQSLPT----------LTGTWQPPSHFSHFS--SPSASSAVPSPRPVS 120
                    SQQQQSLPT          L+GTWQPPSHFSHFS  SPSASS VPSPRPV+
Sbjct: 61  ASTPLPNQPSQQQQSLPTSQQVTRPSTALSGTWQPPSHFSHFSSPSPSASSGVPSPRPVA 120

Query: 121 ASSPSQRGGISIGVPAHQANPSHQPAMFSASYGQHFGGLGRGGVGVVSEPASNATP-QVR 180
           ASSP+QRGGI+IGVPAHQ  PS QPA FSASYGQHFGGLGRGGV  +SEPASNATP QVR
Sbjct: 121 ASSPAQRGGIAIGVPAHQPTPSPQPASFSASYGQHFGGLGRGGVS-MSEPASNATPSQVR 180

Query: 181 PPMQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTPSSASQTFQGHGLMRVPS-SSPSSS 240
           PPMQGMQGLGMLGSSGSSS M QRPVQ SLR PSTP+S +Q FQGHGL+RVPS SSPSSS
Sbjct: 181 PPMQGMQGLGMLGSSGSSSHMPQRPVQSSLRMPSTPNSTAQNFQGHGLLRVPSASSPSSS 240

Query: 241 LPSTSQGMQPANQPWLPSTSQGKPPLPTPSYRPHASSTAMQQRSHIPQQQNHPLAPASQP 300
           LP+TSQGMQP+NQPWLPSTSQGKPPLPTPSYRP A+S A+QQRSHIPQQQNHPL PASQ 
Sbjct: 241 LPNTSQGMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPALQQRSHIPQQQNHPLTPASQQ 300

Query: 301 QQISSAPQQQPA-AHLQQEHFTQQFQPPRSSQGLPHQQQAAKAQGSANQKAFPLAPAQTN 360
           QQISS PQQQPA +H QQEHF QQFQP RSSQGLPHQQQAA+AQG AN KA PLAP+QT+
Sbjct: 301 QQISSTPQQQPAQSHQQQEHFAQQFQPSRSSQGLPHQQQAARAQGPANPKASPLAPSQTS 360

Query: 361 NTQTMTQSRAITAEVEEPCSRILSKRSIGDLVNQIDPSERLDPEVEDVLVDLAEEFVESI 420
           NTQTM+QSRA++AE EEPCSRILSKRSIG+LVNQIDPSERLDPEVED+LVDLAEEFVESI
Sbjct: 361 NTQTMSQSRAVSAETEEPCSRILSKRSIGELVNQIDPSERLDPEVEDLLVDLAEEFVESI 420

Query: 421 TTFGCSLAKHRKSSTLEAKDILLHLEKNWNLTLPGFGSDDIKIFRKPVTNDSHRERLAAV 480
           TTFGCSLAKHRKS+TLEAKDILLHLEKNWN+TLPGF SD+IKIFRKP+TND+HRERLAAV
Sbjct: 421 TTFGCSLAKHRKSTTLEAKDILLHLEKNWNITLPGFCSDEIKIFRKPLTNDTHRERLAAV 480

Query: 481 KKSMAASEMANTRSSAGQAAGNNKSSLAKTPAV 483
           KKS+ ASEMA+TRSSAGQAAGN KSSLAKTPAV
Sbjct: 481 KKSIVASEMASTRSSAGQAAGNTKSSLAKTPAV 511

[Close]

BLAST of Sed0015742 vs. NCBI nr
Match: XP_023544738.1 (transcription initiation factor TFIID subunit 12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 721.5 bits (1861), Expect = 4.9e-204
Identity = 415/513 (80.90%), Postives = 445/513 (86.74%), Query Frame = 0


Query: 1   MDSSSQSPSEPPPAAPPPHPPPESTVSSAATSALAPPQSSQNPNPNIN-----NQNPN-- 60
           MDSS+QSPSE PPAA  PHPPP +TVSSA TS  APPQSS N NPNIN     NQNPN  
Sbjct: 1   MDSSTQSPSE-PPAASSPHPPPATTVSSATTSVAAPPQSSPNANPNINPSSFQNQNPNSK 60

Query: 61  ---------SQQQQSLPT----------LTGTWQPPSHFSHFS--SPSASSAVPSPRPVS 120
                    SQQQQSLPT          L+GTWQPPSHFSHFS  SPSASS VPSPRPV+
Sbjct: 61  ASTPLPNQPSQQQQSLPTSQQVTRPSTALSGTWQPPSHFSHFSSPSPSASSGVPSPRPVA 120

Query: 121 ASSPSQRGGISIGVPAHQANPSHQPAMFSASYGQHFGGLGRGGVGVVSEPASNATP-QVR 180
           ASSP+QRGGI+IGVPAHQ  PS QPA FSASYGQHFGGLGRGGV  +SEPASNATP QVR
Sbjct: 121 ASSPAQRGGIAIGVPAHQPTPSPQPASFSASYGQHFGGLGRGGVS-MSEPASNATPSQVR 180

Query: 181 PPMQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTPSSASQTFQGHGLMRVPS-SSPSSS 240
           PPMQGMQGLGMLGSSGSSS M QRPVQ SLR PSTP+S +Q FQGHGL+RVPS SSPSSS
Sbjct: 181 PPMQGMQGLGMLGSSGSSSHMPQRPVQSSLRMPSTPNSTAQNFQGHGLLRVPSASSPSSS 240

Query: 241 LPSTSQGMQPANQPWLPSTSQGKPPLPTPSYRPHASSTAMQQRSHIPQQQNHPLAPASQP 300
           LP+TSQGMQP+NQPWLPSTSQGKPPLPTPSYRP A+S A+QQRSHIPQQQNHPL PASQ 
Sbjct: 241 LPNTSQGMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPALQQRSHIPQQQNHPLIPASQQ 300

Query: 301 QQISSAPQQQPA-AHLQQEHFTQQFQPPRSSQGLPHQQQAAKAQGSANQKAFPLAPAQTN 360
           QQISS PQQQPA +H QQEHF QQFQP RSSQGLPHQQQAA+AQG AN KA PLAP+QT+
Sbjct: 301 QQISSTPQQQPAQSHQQQEHFAQQFQPSRSSQGLPHQQQAARAQGPANPKASPLAPSQTS 360

Query: 361 NTQTMTQSRAITAEVEEPCSRILSKRSIGDLVNQIDPSERLDPEVEDVLVDLAEEFVESI 420
           NTQTM+QSRA++AE EEPCSRILSKRSIG+LVNQIDPSERLDPEVED+LVDLAEEFVESI
Sbjct: 361 NTQTMSQSRAVSAETEEPCSRILSKRSIGELVNQIDPSERLDPEVEDLLVDLAEEFVESI 420

Query: 421 TTFGCSLAKHRKSSTLEAKDILLHLEKNWNLTLPGFGSDDIKIFRKPVTNDSHRERLAAV 480
           TTFGCSLAKHRKS+TLEAKDILLHLEKNWN+TLPGF SD+IKIFRKP+TND+HRERLAAV
Sbjct: 421 TTFGCSLAKHRKSTTLEAKDILLHLEKNWNITLPGFCSDEIKIFRKPLTNDTHRERLAAV 480

Query: 481 KKSMAASEMANTRSSAGQAAGNNKSSLAKTPAV 483
           KKS+ ASEMA+TRSSAGQAAGN KSSLAKTPAV
Sbjct: 481 KKSIVASEMASTRSSAGQAAGNTKSSLAKTPAV 511

[Close]

BLAST of Sed0015742 vs. NCBI nr
Match: XP_022978365.1 (transcription initiation factor TFIID subunit 12 [Cucurbita maxima])

HSP 1 Score: 720.3 bits (1858), Expect = 1.1e-203
Identity = 415/513 (80.90%), Postives = 444/513 (86.55%), Query Frame = 0


Query: 1   MDSSSQSPSEPPPAAPPPHPPPESTVSSAATSALAPPQSSQNPNPNIN-----NQNPN-- 60
           MDSSSQSPSE PPAA  PHPPP +TVSSA TS  APPQSS N NPNIN     NQNPN  
Sbjct: 1   MDSSSQSPSE-PPAASSPHPPPATTVSSATTSVAAPPQSSPNANPNINPSSFQNQNPNSK 60

Query: 61  ---------SQQQQSLPT----------LTGTWQPPSHFSHFS--SPSASSAVPSPRPVS 120
                    SQQQQSLPT          L+GTWQPPSHFSHFS  SPSASS VPSPRPV+
Sbjct: 61  ASTPQPNQPSQQQQSLPTSQQVTRPSTALSGTWQPPSHFSHFSSPSPSASSGVPSPRPVA 120

Query: 121 ASSPSQRGGISIGVPAHQANPSHQPAMFSASYGQHFGGLGRGGVGVVSEPASNATP-QVR 180
           ASSP+QRGGI+IGVPAHQ  PS QPA FSASYGQHFGGLGRGGV  +SEPASNATP QVR
Sbjct: 121 ASSPAQRGGIAIGVPAHQPTPSPQPASFSASYGQHFGGLGRGGVS-MSEPASNATPSQVR 180

Query: 181 PPMQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTPSSASQTFQGHGLMRVPS-SSPSSS 240
           PPMQGMQGLGMLGSSGSSS M QRPVQ SLR PSTP+S +Q FQGHGL+RVPS SSPSSS
Sbjct: 181 PPMQGMQGLGMLGSSGSSSHMPQRPVQSSLRMPSTPNSTAQNFQGHGLLRVPSASSPSSS 240

Query: 241 LPSTSQGMQPANQPWLPSTSQGKPPLPTPSYRPHASSTAMQQRSHIPQQQNHPLAPASQP 300
           LP+TSQGMQP+NQPWLPSTSQGKPPLPTPSYRP A+S A+QQRSHIPQQQNHPL PASQ 
Sbjct: 241 LPNTSQGMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPALQQRSHIPQQQNHPLPPASQQ 300

Query: 301 QQISSAPQQQPA-AHLQQEHFTQQFQPPRSSQGLPHQQQAAKAQGSANQKAFPLAPAQTN 360
           QQISS PQQQPA +H QQEHF QQFQP RSSQGLPHQQQAA+AQG AN KA PLAP+QT+
Sbjct: 301 QQISSTPQQQPAQSHQQQEHFAQQFQPSRSSQGLPHQQQAARAQGPANPKASPLAPSQTS 360

Query: 361 NTQTMTQSRAITAEVEEPCSRILSKRSIGDLVNQIDPSERLDPEVEDVLVDLAEEFVESI 420
           NTQ M+QSRA++AE EEPCSRILSKRSIG+LVNQIDPSERLDPEVED+LVDLAEEFVESI
Sbjct: 361 NTQPMSQSRAVSAETEEPCSRILSKRSIGELVNQIDPSERLDPEVEDLLVDLAEEFVESI 420

Query: 421 TTFGCSLAKHRKSSTLEAKDILLHLEKNWNLTLPGFGSDDIKIFRKPVTNDSHRERLAAV 480
           TTFGCSLAKHRKS+TLEAKDILLHLEKNWN+TLPGF SD+IKIFRKP+TND+HRERLAAV
Sbjct: 421 TTFGCSLAKHRKSTTLEAKDILLHLEKNWNITLPGFCSDEIKIFRKPLTNDTHRERLAAV 480

Query: 481 KKSMAASEMANTRSSAGQAAGNNKSSLAKTPAV 483
           KKS+ ASEMA+TRSSAGQAAGN KSSLAKTPAV
Sbjct: 481 KKSIVASEMASTRSSAGQAAGNTKSSLAKTPAV 511

[Close]

BLAST of Sed0015742 vs. NCBI nr
Match: XP_038883059.1 (transcription initiation factor TFIID subunit 12 [Benincasa hispida])

HSP 1 Score: 716.1 bits (1847), Expect = 2.1e-202
Identity = 409/512 (79.88%), Postives = 438/512 (85.55%), Query Frame = 0


Query: 1   MDSSSQSPSEPPPAAPPPHPPPESTVSSAATSALAPPQSSQNPNPNIN-----NQNPN-- 60
           MDSSSQSPSE PPAA  PH PP STV SA TS + PPQSS N NPNIN     NQNPN  
Sbjct: 1   MDSSSQSPSE-PPAASSPHIPPASTVPSATTSVVVPPQSSPNANPNINPSSFQNQNPNSK 60

Query: 61  ---------SQQQQSLP----------TLTGTWQPPSHFSHFS--SPSASSAVPSPRPVS 120
                    SQQQQSLP          +L+GTWQPPSHFSHFS  SPSASS+VP+PRPVS
Sbjct: 61  ASTPLPNQPSQQQQSLPPSQQISRPSASLSGTWQPPSHFSHFSSPSPSASSSVPTPRPVS 120

Query: 121 ASSPSQRGGISIGVPAHQANPSHQPAMFSASYGQHFGGLGRGGVGVVSEPASNATPQVRP 180
           ASSP+QRGG++IGVPAHQ +PS QPA FSASYGQHFGGLGRGGV +   P++    QVRP
Sbjct: 121 ASSPAQRGGVAIGVPAHQPSPSPQPAPFSASYGQHFGGLGRGGVSISDGPSNVNPSQVRP 180

Query: 181 PMQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTPSSASQTFQGHGLMRVPS-SSPSSSL 240
           PMQGMQGLGMLGSSGSS QMLQRPVQ SLRPPSTP+SASQ+FQGHGL+RVPS SSPSSSL
Sbjct: 181 PMQGMQGLGMLGSSGSSPQMLQRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSPSSSL 240

Query: 241 PSTSQGMQPANQPWLPSTSQGKPPLPTPSYRPHASSTAMQQRSHIPQQQNHPLAPASQPQ 300
           P+TSQGMQP+NQPWLPS+SQGKPPLPTPSYRP  +S AMQQRSHIPQQQNHPL PA Q Q
Sbjct: 241 PNTSQGMQPSNQPWLPSSSQGKPPLPTPSYRPQVNSPAMQQRSHIPQQQNHPLTPAPQQQ 300

Query: 301 QISSAPQQQPA-AHLQQEHFTQQFQPPRSSQGLPHQQQAAKAQGSANQKAFPLAPAQTNN 360
           QISSAPQQQPA +H  QEHF QQFQ  RS QGLPHQQQAA+AQG ANQK  PLAP+QTNN
Sbjct: 301 QISSAPQQQPAHSHQPQEHFAQQFQSSRSPQGLPHQQQAARAQGPANQKPSPLAPSQTNN 360

Query: 361 TQTMTQSRAITAEVEEPCSRILSKRSIGDLVNQIDPSERLDPEVEDVLVDLAEEFVESIT 420
           TQTMTQSRAITAE EEPCSRILSKRSIG LVNQIDPSERLDPEVED+LVDLAEEFVESIT
Sbjct: 361 TQTMTQSRAITAETEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESIT 420

Query: 421 TFGCSLAKHRKSSTLEAKDILLHLEKNWNLTLPGFGSDDIKIFRKPVTNDSHRERLAAVK 480
           TFGCSLAKHRKS+TLEAKDILLHLEKNWNLTLPGFGSD+IKIFRKP+TND+HRERLAAVK
Sbjct: 421 TFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERLAAVK 480

Query: 481 KSMAASEMANTRSSAGQAAGNNKSSLAKTPAV 483
           KS+ ASEMANTR+SAGQAAGN KSSL KTPAV
Sbjct: 481 KSIVASEMANTRNSAGQAAGNTKSSLTKTPAV 511

[Close]

BLAST of Sed0015742 vs. NCBI nr
Match: XP_011657695.1 (transcription initiation factor TFIID subunit 12 [Cucumis sativus] >KGN48255.1 hypothetical protein Csa_002821 [Cucumis sativus])

HSP 1 Score: 701.8 bits (1810), Expect = 4.0e-198
Identity = 406/513 (79.14%), Postives = 432/513 (84.21%), Query Frame = 0


Query: 1   MDSSSQSPSEPPPAAPPPHPPPESTVSSAATSALAPPQSSQNPNPNIN-----NQNPNS- 60
           MDSSSQSPSEPPPA+  PH PP ST  SA      PPQSS N NPNIN     NQNPNS 
Sbjct: 1   MDSSSQSPSEPPPAS-SPHLPPTSTAPSATNPVTVPPQSSPNANPNINPSSFQNQNPNSK 60

Query: 61  ----------QQQQSLPT----------LTGTWQPPSHFSHFS--SPSASSAVPSPRPVS 120
                     QQ QSLPT          L+ TWQPPSHFSHFS  SPSASS+VPSPRPVS
Sbjct: 61  ASTPLPNQPPQQTQSLPTSQQITRPSTALSATWQPPSHFSHFSSPSPSASSSVPSPRPVS 120

Query: 121 ASSPSQRGGISIGVPAHQANPSHQPAMFSASYGQHFGGLGRGGVGVVSEPASNATP-QVR 180
           ASSP+QR G++IGVPAHQ  PS QPA FSASYGQHFGGLGRGGV  +S+ ASN+ P QVR
Sbjct: 121 ASSPAQRSGVAIGVPAHQPTPSPQPAPFSASYGQHFGGLGRGGVS-ISDGASNSNPSQVR 180

Query: 181 PPMQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTPSSASQTFQGHGLMRVPS-SSPSSS 240
           PPMQGMQGLGMLGSSGSSSQML RPVQ SLRPPSTP+SASQ FQGHGL+RVPS SSPSSS
Sbjct: 181 PPMQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQNFQGHGLLRVPSTSSPSSS 240

Query: 241 LPSTSQGMQPANQPWLPSTSQGKPPLPTPSYRPHASSTAMQQRSHIPQQQNHPLAPASQP 300
           LP+TSQGMQP NQPWLPS+SQGKPPLPTPSYRP A+S AMQQRSHIPQQQNHPL P SQ 
Sbjct: 241 LPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSPAMQQRSHIPQQQNHPLTPVSQQ 300

Query: 301 QQISSAPQQQPA-AHLQQEHFTQQFQPPRSSQGLPHQQQAAKAQGSANQKAFPLAPAQTN 360
           QQISSAPQQQPA +H  QEHF QQFQ  RSSQGLPHQQQAA+AQG AN KA PLAP QTN
Sbjct: 301 QQISSAPQQQPAQSHQPQEHFAQQFQQSRSSQGLPHQQQAARAQGPANPKASPLAPPQTN 360

Query: 361 NTQTMTQSRAITAEVEEPCSRILSKRSIGDLVNQIDPSERLDPEVEDVLVDLAEEFVESI 420
           N Q +T SRAITAE+EEPCSRILSKRSIG LVNQIDPSERLDPEVED+LVDLAEEFVESI
Sbjct: 361 NAQALTPSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESI 420

Query: 421 TTFGCSLAKHRKSSTLEAKDILLHLEKNWNLTLPGFGSDDIKIFRKPVTNDSHRERLAAV 480
           TTFGCSLAKHRKS+TLEAKDILLHLEKNWNLTLPGFGSD+IKIFRKP+TND+HRER+AAV
Sbjct: 421 TTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERVAAV 480

Query: 481 KKSMAASEMANTRSSAGQAAGNNKSSLAKTPAV 483
           KKS+ ASEMA+TRSSAGQAAGN KSSL KTPAV
Sbjct: 481 KKSIVASEMASTRSSAGQAAGNTKSSLTKTPAV 511

[Close]

BLAST of Sed0015742 vs. ExPASy Swiss-Prot
Match: Q9SR71 (Transcription initiation factor TFIID subunit 12 OS=Arabidopsis thaliana OX=3702 GN=TAF12 PE=1 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 1.5e-94
Identity = 253/531 (47.65%), Postives = 311/531 (58.57%), Query Frame = 0


Query: 3   SSSQSPSEPPPAA-------------PPPHPPPESTVSSAATSALAPPQSSQNPNPNINN 62
           ++SQ P  PP  +             P  +P P S VSS  +S  AP   S NPNPN   
Sbjct: 9   TASQPPETPPQPSDSKPSTLTQIQPTPSTNPSPSSVVSSIPSSP-APQSPSLNPNPNPPQ 68

Query: 63  -----QNPNSQQQQSL---------PTLTGTWQPPSHFSHFSSPSASSAVPSPRPVSASS 122
                 +P +QQQQ L            +  WQ  S ++HFSS S+     S  P S+SS
Sbjct: 69  YTRPVTSPATQQQQHLSQPLVRPPPQAYSRPWQQHSSYTHFSSASSPLLSSSSAPASSSS 128

Query: 123 P-----SQRGGISIGVPAH-----QANPS-HQPAMFSASYGQHFGGLGRGGVGVVSEPAS 182
                  QRGG++IGVPA         PS H P+ F  S+GQ +GGLGRG VG+    ++
Sbjct: 129 SLPISGQQRGGMAIGVPASPIPSPSPTPSQHSPSAFPGSFGQQYGGLGRGTVGMSEATSN 188

Query: 183 NATPQVRPPMQGMQGLGMLGSSGSSSQM--------LQRPVQPSLRP---PSTPSSASQT 242
            ++PQVR  MQG QG+GM+G+ GS SQ+         QRP Q SLRP    ST S  +Q 
Sbjct: 189 TSSPQVR-MMQGTQGIGMMGTLGSGSQIRPSGMTQHQQRPTQSSLRPASSTSTQSPVAQN 248

Query: 243 FQGHGLMR-VPSSSPS-SSLPSTSQGMQPANQPWLPSTSQGKPPLPTPSYRPHASSTAMQ 302
           FQGH LMR  P SSP+  S  ++ Q +Q  NQPWL ST QGKPPLP PSYRP  +S +MQ
Sbjct: 249 FQGHSLMRPSPISSPNVQSTGASQQSLQAINQPWLSSTPQGKPPLPPPSYRPQVNSPSMQ 308

Query: 303 QRSHIPQQQNHPLAPASQPQQISSAPQQQPAAHLQQEHFTQQFQPPRSSQGLPHQQQAAK 362
           QR HIPQQ     A   QPQQ  S  Q QP   LQQ    Q        Q L H  Q  +
Sbjct: 309 QRPHIPQQHISTSAATPQPQQQQSQQQHQPQEQLQQLRSPQ--------QPLAHPHQPTR 368

Query: 363 AQGSANQK-AFPLAPAQTNNTQTMTQSRAITAEVEEPCSRILSKRSIGDLVNQIDPSERL 422
            QG  NQK   P+ P+Q    Q    ++ ++AE E    RIL KRSI +L+ QIDPSE+L
Sbjct: 369 VQGLVNQKVTSPVMPSQPPVAQPGNHAKTVSAETEPSDDRILGKRSIHELLQQIDPSEKL 428

Query: 423 DPEVEDVLVDLAEEFVESITTFGCSLAKHRKSSTLEAKDILLHLEKNWNLTLPGFGSDDI 482
           DPEVED+L D+AE+FVESITTFGCSLAKHRKS  LEAKDILLH+E+NWN+  PGF SD+ 
Sbjct: 429 DPEVEDILSDIAEDFVESITTFGCSLAKHRKSDILEAKDILLHVERNWNIRPPGFSSDEF 488

[Close]

BLAST of Sed0015742 vs. ExPASy Swiss-Prot
Match: Q8VE65 (Transcription initiation factor TFIID subunit 12 OS=Mus musculus OX=10090 GN=Taf12 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.6e-27
Identity = 49/104 (47.12%), Postives = 86/104 (82.69%), Query Frame = 0


Query: 349 SRILSKRSIGDLVNQIDPSERLDPEVEDVLVDLAEEFVESITTFGCSLAKHRKSSTLEAK 408
           +++L+K+ + DLV ++DP+E+LD +VE++L+ +A++F+ES+ T  C LA+HRKSSTLE K
Sbjct: 55  NQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVK 114

Query: 409 DILLHLEKNWNLTLPGFGSDDIKIFRKPVTNDSHRERLAAVKKS 453
           D+ LHLE+ WN+ +PGFGS++I+ ++K  T ++H++R+A ++K+
Sbjct: 115 DVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIRKT 158

[Close]

BLAST of Sed0015742 vs. ExPASy Swiss-Prot
Match: Q3T174 (Transcription initiation factor TFIID subunit 12 OS=Bos taurus OX=9913 GN=TAF12 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 7.8e-27
Identity = 55/137 (40.15%), Postives = 95/137 (69.34%), Query Frame = 0


Query: 325 PAQTNNTQTMTQSRAIT---------AEVEEPCSRILSKRSIGDLVNQIDPSERLDPEVE 384
           PA T    +M  S A+            +    +++L+K+ + DLV ++DP+E+LD +VE
Sbjct: 22  PASTPPQGSMANSTAVVKIPGTPGTGGRLSPENNQVLTKKKLQDLVREVDPNEQLDEDVE 81

Query: 385 DVLVDLAEEFVESITTFGCSLAKHRKSSTLEAKDILLHLEKNWNLTLPGFGSDDIKIFRK 444
           ++L+ +A++F+ES+ T  C LA+HRKSSTLE KD+ LHLE+ WN+ +PGFGS++I+ ++K
Sbjct: 82  EMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLERQWNMWIPGFGSEEIRPYKK 141

Query: 445 PVTNDSHRERLAAVKKS 453
             T ++H++R+A ++K+
Sbjct: 142 ACTTEAHKQRMALIRKT 158

[Close]

BLAST of Sed0015742 vs. ExPASy Swiss-Prot
Match: Q16514 (Transcription initiation factor TFIID subunit 12 OS=Homo sapiens OX=9606 GN=TAF12 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 7.8e-27
Identity = 55/137 (40.15%), Postives = 95/137 (69.34%), Query Frame = 0


Query: 325 PAQTNNTQTMTQSRAIT---------AEVEEPCSRILSKRSIGDLVNQIDPSERLDPEVE 384
           PA T    +M  S A+            +    +++L+K+ + DLV ++DP+E+LD +VE
Sbjct: 22  PASTPPQGSMANSTAVVKIPGTPGAGGRLSPENNQVLTKKKLQDLVREVDPNEQLDEDVE 81

Query: 385 DVLVDLAEEFVESITTFGCSLAKHRKSSTLEAKDILLHLEKNWNLTLPGFGSDDIKIFRK 444
           ++L+ +A++F+ES+ T  C LA+HRKSSTLE KD+ LHLE+ WN+ +PGFGS++I+ ++K
Sbjct: 82  EMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLERQWNMWIPGFGSEEIRPYKK 141

Query: 445 PVTNDSHRERLAAVKKS 453
             T ++H++R+A ++K+
Sbjct: 142 ACTTEAHKQRMALIRKT 158

[Close]

BLAST of Sed0015742 vs. ExPASy Swiss-Prot
Match: Q91858 (Transcription initiation factor TFIID subunit 12 OS=Xenopus laevis OX=8355 GN=taf12 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.0e-26
Identity = 54/130 (41.54%), Postives = 93/130 (71.54%), Query Frame = 0


Query: 325 PAQTNNTQT--MTQSRAITAEVEEPCSRILSKRSIGDLVNQIDPSERLDPEVEDVLVDLA 384
           PA  N+T    +    A         +++LSK+ + DLV ++DP+E+LD +VE++L+ +A
Sbjct: 32  PAMANSTPVGKVPVPTAGGGRASPEANQVLSKKKLHDLVREVDPNEQLDEDVEEMLLQIA 91

Query: 385 EEFVESITTFGCSLAKHRKSSTLEAKDILLHLEKNWNLTLPGFGSDDIKIFRKPVTNDSH 444
           ++F+ES+ +  C LA+HRKS+TLE KD+ LHLE+ WN+ +PGFGS++I+ ++K  T ++H
Sbjct: 92  DDFIESVVSAACQLARHRKSNTLEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAH 151

Query: 445 RERLAAVKKS 453
           ++R+A +KK+
Sbjct: 152 KQRMALIKKT 161

[Close]

BLAST of Sed0015742 vs. ExPASy TrEMBL
Match: A0A6J1EDW5 (transcription initiation factor TFIID subunit 12 OS=Cucurbita moschata OX=3662 GN=LOC111433276 PE=3 SV=1)

HSP 1 Score: 723.0 bits (1865), Expect = 8.2e-205
Identity = 416/513 (81.09%), Postives = 445/513 (86.74%), Query Frame = 0


Query: 1   MDSSSQSPSEPPPAAPPPHPPPESTVSSAATSALAPPQSSQNPNPNIN-----NQNPN-- 60
           MDSSSQSPSE PPAA  PHPPP +TVSSA TS  APPQSS N NPNIN     NQNPN  
Sbjct: 1   MDSSSQSPSE-PPAASSPHPPPATTVSSATTSVAAPPQSSPNANPNINPSSFQNQNPNSK 60

Query: 61  ---------SQQQQSLPT----------LTGTWQPPSHFSHFS--SPSASSAVPSPRPVS 120
                    SQQQQSLPT          L+GTWQPPSHFSHFS  SPSASS VPSPRPV+
Sbjct: 61  ASTPLPNQPSQQQQSLPTSQQVTRPSTALSGTWQPPSHFSHFSSPSPSASSGVPSPRPVA 120

Query: 121 ASSPSQRGGISIGVPAHQANPSHQPAMFSASYGQHFGGLGRGGVGVVSEPASNATP-QVR 180
           ASSP+QRGGI+IGVPAHQ  PS QPA FSASYGQHFGGLGRGGV  +SEPASNATP QVR
Sbjct: 121 ASSPAQRGGIAIGVPAHQPTPSPQPASFSASYGQHFGGLGRGGVS-MSEPASNATPSQVR 180

Query: 181 PPMQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTPSSASQTFQGHGLMRVPS-SSPSSS 240
           PPMQGMQGLGMLGSSGSSS M QRPVQ SLR PSTP+S +Q FQGHGL+RVPS SSPSSS
Sbjct: 181 PPMQGMQGLGMLGSSGSSSHMPQRPVQSSLRMPSTPNSTAQNFQGHGLLRVPSASSPSSS 240

Query: 241 LPSTSQGMQPANQPWLPSTSQGKPPLPTPSYRPHASSTAMQQRSHIPQQQNHPLAPASQP 300
           LP+TSQGMQP+NQPWLPSTSQGKPPLPTPSYRP A+S A+QQRSHIPQQQNHPL PASQ 
Sbjct: 241 LPNTSQGMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPALQQRSHIPQQQNHPLTPASQQ 300

Query: 301 QQISSAPQQQPA-AHLQQEHFTQQFQPPRSSQGLPHQQQAAKAQGSANQKAFPLAPAQTN 360
           QQISS PQQQPA +H QQEHF QQFQP RSSQGLPHQQQAA+AQG AN KA PLAP+QT+
Sbjct: 301 QQISSTPQQQPAQSHQQQEHFAQQFQPSRSSQGLPHQQQAARAQGPANPKASPLAPSQTS 360

Query: 361 NTQTMTQSRAITAEVEEPCSRILSKRSIGDLVNQIDPSERLDPEVEDVLVDLAEEFVESI 420
           NTQTM+QSRA++AE EEPCSRILSKRSIG+LVNQIDPSERLDPEVED+LVDLAEEFVESI
Sbjct: 361 NTQTMSQSRAVSAETEEPCSRILSKRSIGELVNQIDPSERLDPEVEDLLVDLAEEFVESI 420

Query: 421 TTFGCSLAKHRKSSTLEAKDILLHLEKNWNLTLPGFGSDDIKIFRKPVTNDSHRERLAAV 480
           TTFGCSLAKHRKS+TLEAKDILLHLEKNWN+TLPGF SD+IKIFRKP+TND+HRERLAAV
Sbjct: 421 TTFGCSLAKHRKSTTLEAKDILLHLEKNWNITLPGFCSDEIKIFRKPLTNDTHRERLAAV 480

Query: 481 KKSMAASEMANTRSSAGQAAGNNKSSLAKTPAV 483
           KKS+ ASEMA+TRSSAGQAAGN KSSLAKTPAV
Sbjct: 481 KKSIVASEMASTRSSAGQAAGNTKSSLAKTPAV 511

[Close]

BLAST of Sed0015742 vs. ExPASy TrEMBL
Match: A0A6J1IPW3 (transcription initiation factor TFIID subunit 12 OS=Cucurbita maxima OX=3661 GN=LOC111478377 PE=3 SV=1)

HSP 1 Score: 720.3 bits (1858), Expect = 5.3e-204
Identity = 415/513 (80.90%), Postives = 444/513 (86.55%), Query Frame = 0


Query: 1   MDSSSQSPSEPPPAAPPPHPPPESTVSSAATSALAPPQSSQNPNPNIN-----NQNPN-- 60
           MDSSSQSPSE PPAA  PHPPP +TVSSA TS  APPQSS N NPNIN     NQNPN  
Sbjct: 1   MDSSSQSPSE-PPAASSPHPPPATTVSSATTSVAAPPQSSPNANPNINPSSFQNQNPNSK 60

Query: 61  ---------SQQQQSLPT----------LTGTWQPPSHFSHFS--SPSASSAVPSPRPVS 120
                    SQQQQSLPT          L+GTWQPPSHFSHFS  SPSASS VPSPRPV+
Sbjct: 61  ASTPQPNQPSQQQQSLPTSQQVTRPSTALSGTWQPPSHFSHFSSPSPSASSGVPSPRPVA 120

Query: 121 ASSPSQRGGISIGVPAHQANPSHQPAMFSASYGQHFGGLGRGGVGVVSEPASNATP-QVR 180
           ASSP+QRGGI+IGVPAHQ  PS QPA FSASYGQHFGGLGRGGV  +SEPASNATP QVR
Sbjct: 121 ASSPAQRGGIAIGVPAHQPTPSPQPASFSASYGQHFGGLGRGGVS-MSEPASNATPSQVR 180

Query: 181 PPMQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTPSSASQTFQGHGLMRVPS-SSPSSS 240
           PPMQGMQGLGMLGSSGSSS M QRPVQ SLR PSTP+S +Q FQGHGL+RVPS SSPSSS
Sbjct: 181 PPMQGMQGLGMLGSSGSSSHMPQRPVQSSLRMPSTPNSTAQNFQGHGLLRVPSASSPSSS 240

Query: 241 LPSTSQGMQPANQPWLPSTSQGKPPLPTPSYRPHASSTAMQQRSHIPQQQNHPLAPASQP 300
           LP+TSQGMQP+NQPWLPSTSQGKPPLPTPSYRP A+S A+QQRSHIPQQQNHPL PASQ 
Sbjct: 241 LPNTSQGMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPALQQRSHIPQQQNHPLPPASQQ 300

Query: 301 QQISSAPQQQPA-AHLQQEHFTQQFQPPRSSQGLPHQQQAAKAQGSANQKAFPLAPAQTN 360
           QQISS PQQQPA +H QQEHF QQFQP RSSQGLPHQQQAA+AQG AN KA PLAP+QT+
Sbjct: 301 QQISSTPQQQPAQSHQQQEHFAQQFQPSRSSQGLPHQQQAARAQGPANPKASPLAPSQTS 360

Query: 361 NTQTMTQSRAITAEVEEPCSRILSKRSIGDLVNQIDPSERLDPEVEDVLVDLAEEFVESI 420
           NTQ M+QSRA++AE EEPCSRILSKRSIG+LVNQIDPSERLDPEVED+LVDLAEEFVESI
Sbjct: 361 NTQPMSQSRAVSAETEEPCSRILSKRSIGELVNQIDPSERLDPEVEDLLVDLAEEFVESI 420

Query: 421 TTFGCSLAKHRKSSTLEAKDILLHLEKNWNLTLPGFGSDDIKIFRKPVTNDSHRERLAAV 480
           TTFGCSLAKHRKS+TLEAKDILLHLEKNWN+TLPGF SD+IKIFRKP+TND+HRERLAAV
Sbjct: 421 TTFGCSLAKHRKSTTLEAKDILLHLEKNWNITLPGFCSDEIKIFRKPLTNDTHRERLAAV 480

Query: 481 KKSMAASEMANTRSSAGQAAGNNKSSLAKTPAV 483
           KKS+ ASEMA+TRSSAGQAAGN KSSLAKTPAV
Sbjct: 481 KKSIVASEMASTRSSAGQAAGNTKSSLAKTPAV 511

[Close]

BLAST of Sed0015742 vs. ExPASy TrEMBL
Match: A0A0A0KEX0 (TFIID_20kDa domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G452070 PE=3 SV=1)

HSP 1 Score: 701.8 bits (1810), Expect = 2.0e-198
Identity = 406/513 (79.14%), Postives = 432/513 (84.21%), Query Frame = 0


Query: 1   MDSSSQSPSEPPPAAPPPHPPPESTVSSAATSALAPPQSSQNPNPNIN-----NQNPNS- 60
           MDSSSQSPSEPPPA+  PH PP ST  SA      PPQSS N NPNIN     NQNPNS 
Sbjct: 1   MDSSSQSPSEPPPAS-SPHLPPTSTAPSATNPVTVPPQSSPNANPNINPSSFQNQNPNSK 60

Query: 61  ----------QQQQSLPT----------LTGTWQPPSHFSHFS--SPSASSAVPSPRPVS 120
                     QQ QSLPT          L+ TWQPPSHFSHFS  SPSASS+VPSPRPVS
Sbjct: 61  ASTPLPNQPPQQTQSLPTSQQITRPSTALSATWQPPSHFSHFSSPSPSASSSVPSPRPVS 120

Query: 121 ASSPSQRGGISIGVPAHQANPSHQPAMFSASYGQHFGGLGRGGVGVVSEPASNATP-QVR 180
           ASSP+QR G++IGVPAHQ  PS QPA FSASYGQHFGGLGRGGV  +S+ ASN+ P QVR
Sbjct: 121 ASSPAQRSGVAIGVPAHQPTPSPQPAPFSASYGQHFGGLGRGGVS-ISDGASNSNPSQVR 180

Query: 181 PPMQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTPSSASQTFQGHGLMRVPS-SSPSSS 240
           PPMQGMQGLGMLGSSGSSSQML RPVQ SLRPPSTP+SASQ FQGHGL+RVPS SSPSSS
Sbjct: 181 PPMQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQNFQGHGLLRVPSTSSPSSS 240

Query: 241 LPSTSQGMQPANQPWLPSTSQGKPPLPTPSYRPHASSTAMQQRSHIPQQQNHPLAPASQP 300
           LP+TSQGMQP NQPWLPS+SQGKPPLPTPSYRP A+S AMQQRSHIPQQQNHPL P SQ 
Sbjct: 241 LPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSPAMQQRSHIPQQQNHPLTPVSQQ 300

Query: 301 QQISSAPQQQPA-AHLQQEHFTQQFQPPRSSQGLPHQQQAAKAQGSANQKAFPLAPAQTN 360
           QQISSAPQQQPA +H  QEHF QQFQ  RSSQGLPHQQQAA+AQG AN KA PLAP QTN
Sbjct: 301 QQISSAPQQQPAQSHQPQEHFAQQFQQSRSSQGLPHQQQAARAQGPANPKASPLAPPQTN 360

Query: 361 NTQTMTQSRAITAEVEEPCSRILSKRSIGDLVNQIDPSERLDPEVEDVLVDLAEEFVESI 420
           N Q +T SRAITAE+EEPCSRILSKRSIG LVNQIDPSERLDPEVED+LVDLAEEFVESI
Sbjct: 361 NAQALTPSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESI 420

Query: 421 TTFGCSLAKHRKSSTLEAKDILLHLEKNWNLTLPGFGSDDIKIFRKPVTNDSHRERLAAV 480
           TTFGCSLAKHRKS+TLEAKDILLHLEKNWNLTLPGFGSD+IKIFRKP+TND+HRER+AAV
Sbjct: 421 TTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERVAAV 480

Query: 481 KKSMAASEMANTRSSAGQAAGNNKSSLAKTPAV 483
           KKS+ ASEMA+TRSSAGQAAGN KSSL KTPAV
Sbjct: 481 KKSIVASEMASTRSSAGQAAGNTKSSLTKTPAV 511

[Close]

BLAST of Sed0015742 vs. ExPASy TrEMBL
Match: A0A5A7SKM4 (Transcription initiation factor TFIID subunit 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001190 PE=3 SV=1)

HSP 1 Score: 699.1 bits (1803), Expect = 1.3e-197
Identity = 406/513 (79.14%), Postives = 433/513 (84.41%), Query Frame = 0


Query: 1   MDSSSQSPSEPPPAAPPPHPPPESTVSSAATSALAPPQSSQNPNPNIN-----NQNPN-- 60
           MDSSSQSPSE PPAA  P  PP STVSSA  S   PPQSS   NP++N     NQNPN  
Sbjct: 1   MDSSSQSPSE-PPAASSPQLPPASTVSSATNSVAVPPQSSPKANPSVNPSSFQNQNPNSK 60

Query: 61  ---------SQQQQSLPT----------LTGTWQPPSHFSHF--SSPSASSAVPSPRPVS 120
                    SQQ QSLPT          L+GTWQPPSHFSHF  SSPS SS VPSPRPVS
Sbjct: 61  ASTPLPNQPSQQIQSLPTSQQITRPSTALSGTWQPPSHFSHFSSSSPSVSSGVPSPRPVS 120

Query: 121 ASSPSQRGGISIGVPAHQANPSHQPAMFSASYGQHFGGLGRGGVGVVSEPASNATP-QVR 180
           ASSP+QRGG++IGVPAHQ +PS QPA FSASYGQHFGGLGRGGV  +S+ ASN+ P QVR
Sbjct: 121 ASSPAQRGGVAIGVPAHQPSPSPQPAPFSASYGQHFGGLGRGGVS-ISDGASNSNPSQVR 180

Query: 181 PPMQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTPSSASQTFQGHGLMRVPS-SSPSSS 240
           P MQGMQGLGMLGSSGSSSQML RPVQ SLRPPSTP+SASQ+FQGHGL+RVPS SSPSSS
Sbjct: 181 PSMQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSPSSS 240

Query: 241 LPSTSQGMQPANQPWLPSTSQGKPPLPTPSYRPHASSTAMQQRSHIPQQQNHPLAPASQP 300
           LP+TSQGMQP NQPWLPS+SQGKPPLPTPSYRP A+S+AMQQRSHIPQQQNHPL P SQ 
Sbjct: 241 LPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSSAMQQRSHIPQQQNHPLTPVSQQ 300

Query: 301 QQISSAPQQQPA-AHLQQEHFTQQFQPPRSSQGLPHQQQAAKAQGSANQKAFPLAPAQTN 360
           QQISSAPQQQPA +H  QEHF QQFQP RSSQGLPHQQQAA+AQG AN KA PL PAQTN
Sbjct: 301 QQISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQGPANPKASPLPPAQTN 360

Query: 361 NTQTMTQSRAITAEVEEPCSRILSKRSIGDLVNQIDPSERLDPEVEDVLVDLAEEFVESI 420
           N Q    SRAITAE+EEPCSRILSKRSIG LVNQIDPSERLDPEVED+LVDLAEEFVESI
Sbjct: 361 NAQASAPSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESI 420

Query: 421 TTFGCSLAKHRKSSTLEAKDILLHLEKNWNLTLPGFGSDDIKIFRKPVTNDSHRERLAAV 480
           TTFGCSLAKHRKS+TLEAKDILLHLEKNWNLTLPGFGSD+IKIFRKP+TND+HRERLAAV
Sbjct: 421 TTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERLAAV 480

Query: 481 KKSMAASEMANTRSSAGQAAGNNKSSLAKTPAV 483
           KKS+ ASEMA+TRSSAGQAAGN KSSL KTPAV
Sbjct: 481 KKSIVASEMASTRSSAGQAAGNTKSSLTKTPAV 511

[Close]

BLAST of Sed0015742 vs. ExPASy TrEMBL
Match: A0A5D3C687 (Transcription initiation factor TFIID subunit 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001250 PE=3 SV=1)

HSP 1 Score: 688.0 bits (1774), Expect = 2.9e-194
Identity = 403/513 (78.56%), Postives = 430/513 (83.82%), Query Frame = 0


Query: 1   MDSSSQSPSEPPPAAPPPHPPPESTVSSAATSALAPPQSSQNPNPNIN-----NQNPN-- 60
           MDSSSQSPSE PPAA  P  PP STVSSA  S   PPQSS   NP++N     NQNPN  
Sbjct: 1   MDSSSQSPSE-PPAASSPQLPPASTVSSATNSVAVPPQSSPKANPSVNPSSFQNQNPNSK 60

Query: 61  ---------SQQQQSLPT----------LTGTWQPPSHFSHF--SSPSASSAVPSPRPVS 120
                    SQQ QSLPT          L+GTWQPPSHFSHF  SSPS SS VPSPRPVS
Sbjct: 61  ASTPLPNQPSQQIQSLPTSQQITRPSTALSGTWQPPSHFSHFSSSSPSVSSGVPSPRPVS 120

Query: 121 ASSPSQRGGISIGVPAHQANPSHQPAMFSASYGQHFGGLGRGGVGVVSEPASNATP-QVR 180
           ASSP+QRGG++IGVPAHQ +PS QPA FSASYGQHFGGLGRGGV  +S+ ASN+ P QVR
Sbjct: 121 ASSPAQRGGVAIGVPAHQPSPSPQPAPFSASYGQHFGGLGRGGVS-ISDGASNSNPSQVR 180

Query: 181 PPMQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTPSSASQTFQGHGLMRVPS-SSPSSS 240
           P MQGMQGLGMLGSSGSSSQML RPVQ SLRPPSTP+SASQ+FQGHGL+RVPS SSPSSS
Sbjct: 181 PSMQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSPSSS 240

Query: 241 LPSTSQGMQPANQPWLPSTSQGKPPLPTPSYRPHASSTAMQQRSHIPQQQNHPLAPASQP 300
           LP+TSQGMQP NQPWLPS+SQGKPPLPTPSYRP A+S+AMQQRSHIPQQQNHPL P SQ 
Sbjct: 241 LPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSSAMQQRSHIPQQQNHPLTPVSQQ 300

Query: 301 QQISSAPQQQPA-AHLQQEHFTQQFQPPRSSQGLPHQQQAAKAQGSANQKAFPLAPAQTN 360
           QQISSAPQQQPA +H  QEHF QQFQP RSSQGLPHQQQAA+AQG AN KA PL PAQTN
Sbjct: 301 QQISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQGPANPKASPLPPAQTN 360

Query: 361 NTQTMTQSRAITAEVEEPCSRILSKRSIGDLVNQIDPSERLDPEVEDVLVDLAEEFVESI 420
           N Q    SRAITAE+EEPCSRILSKRSIG L   IDPSERLDPEVED+LVDLAEEFVESI
Sbjct: 361 NAQASAPSRAITAEMEEPCSRILSKRSIGKL---IDPSERLDPEVEDILVDLAEEFVESI 420

Query: 421 TTFGCSLAKHRKSSTLEAKDILLHLEKNWNLTLPGFGSDDIKIFRKPVTNDSHRERLAAV 480
           TTFGCSLAKHRKS+TLEAKDILLHLEKNWNLTLPGFGSD+IKIFRKP+TND+HRERLAAV
Sbjct: 421 TTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERLAAV 480

Query: 481 KKSMAASEMANTRSSAGQAAGNNKSSLAKTPAV 483
           KKS+ ASEMA+TRSSAGQAAGN KSSL KTPAV
Sbjct: 481 KKSIVASEMASTRSSAGQAAGNTKSSLTKTPAV 508

[Close]

BLAST of Sed0015742 vs. TAIR 10
Match: AT3G10070.1 (TBP-associated factor 12 )

HSP 1 Score: 348.2 bits (892), Expect = 1.1e-95
Identity = 253/531 (47.65%), Postives = 311/531 (58.57%), Query Frame = 0


Query: 3   SSSQSPSEPPPAA-------------PPPHPPPESTVSSAATSALAPPQSSQNPNPNINN 62
           ++SQ P  PP  +             P  +P P S VSS  +S  AP   S NPNPN   
Sbjct: 9   TASQPPETPPQPSDSKPSTLTQIQPTPSTNPSPSSVVSSIPSSP-APQSPSLNPNPNPPQ 68

Query: 63  -----QNPNSQQQQSL---------PTLTGTWQPPSHFSHFSSPSASSAVPSPRPVSASS 122
                 +P +QQQQ L            +  WQ  S ++HFSS S+     S  P S+SS
Sbjct: 69  YTRPVTSPATQQQQHLSQPLVRPPPQAYSRPWQQHSSYTHFSSASSPLLSSSSAPASSSS 128

Query: 123 P-----SQRGGISIGVPAH-----QANPS-HQPAMFSASYGQHFGGLGRGGVGVVSEPAS 182
                  QRGG++IGVPA         PS H P+ F  S+GQ +GGLGRG VG+    ++
Sbjct: 129 SLPISGQQRGGMAIGVPASPIPSPSPTPSQHSPSAFPGSFGQQYGGLGRGTVGMSEATSN 188

Query: 183 NATPQVRPPMQGMQGLGMLGSSGSSSQM--------LQRPVQPSLRP---PSTPSSASQT 242
            ++PQVR  MQG QG+GM+G+ GS SQ+         QRP Q SLRP    ST S  +Q 
Sbjct: 189 TSSPQVR-MMQGTQGIGMMGTLGSGSQIRPSGMTQHQQRPTQSSLRPASSTSTQSPVAQN 248

Query: 243 FQGHGLMR-VPSSSPS-SSLPSTSQGMQPANQPWLPSTSQGKPPLPTPSYRPHASSTAMQ 302
           FQGH LMR  P SSP+  S  ++ Q +Q  NQPWL ST QGKPPLP PSYRP  +S +MQ
Sbjct: 249 FQGHSLMRPSPISSPNVQSTGASQQSLQAINQPWLSSTPQGKPPLPPPSYRPQVNSPSMQ 308

Query: 303 QRSHIPQQQNHPLAPASQPQQISSAPQQQPAAHLQQEHFTQQFQPPRSSQGLPHQQQAAK 362
           QR HIPQQ     A   QPQQ  S  Q QP   LQQ    Q        Q L H  Q  +
Sbjct: 309 QRPHIPQQHISTSAATPQPQQQQSQQQHQPQEQLQQLRSPQ--------QPLAHPHQPTR 368

Query: 363 AQGSANQK-AFPLAPAQTNNTQTMTQSRAITAEVEEPCSRILSKRSIGDLVNQIDPSERL 422
            QG  NQK   P+ P+Q    Q    ++ ++AE E    RIL KRSI +L+ QIDPSE+L
Sbjct: 369 VQGLVNQKVTSPVMPSQPPVAQPGNHAKTVSAETEPSDDRILGKRSIHELLQQIDPSEKL 428

Query: 423 DPEVEDVLVDLAEEFVESITTFGCSLAKHRKSSTLEAKDILLHLEKNWNLTLPGFGSDDI 482
           DPEVED+L D+AE+FVESITTFGCSLAKHRKS  LEAKDILLH+E+NWN+  PGF SD+ 
Sbjct: 429 DPEVEDILSDIAEDFVESITTFGCSLAKHRKSDILEAKDILLHVERNWNIRPPGFSSDEF 488

[Close]

BLAST of Sed0015742 vs. TAIR 10
Match: AT1G17440.1 (Transcription initiation factor TFIID subunit A )

HSP 1 Score: 120.9 bits (302), Expect = 2.7e-27
Identity = 136/413 (32.93%), Postives = 198/413 (47.94%), Query Frame = 0


Query: 108 AHQANPSHQPAMFSASYGQHFGGLGRGGVGVVSEPASNATPQVRPPMQGMQGLGMLGSSG 167
           A  A  + QP + +AS  Q  G +     G    P S+        +QGMQ +GM+GS  
Sbjct: 248 AGAAQMNIQPQLLAASPRQKSGMV----QGSQFHPGSSG-----QQLQGMQAMGMMGSLN 307

Query: 168 SSSQM-------LQRPVQP-SLRPPSTPSSASQTFQGHGLMRVPS----SSPSSSLPSTS 227
            +SQM        Q+ + P  +R   +  +A  + Q   L R  S    +   S L    
Sbjct: 308 LTSQMRGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGLAQNG 367

Query: 228 Q-GMQP---ANQPWLPSTS------------------------QGKPPLPTPSYRPHASS 287
           Q GM     + Q WL   S                        Q +  L +P     + S
Sbjct: 368 QAGMMQNSLSQQQWLKQMSGITSPNSFRLQPSQRQALLLQQQQQQQQQLSSPQLHQSSMS 427

Query: 288 TAMQQRSHI--PQQQNHPLAPASQPQQISSAPQQQPAAHLQQ--EHFTQQFQPPRSSQGL 347
              QQ S I   QQQ   L  +   Q  S    QQ    LQQ  +   QQ Q  +    +
Sbjct: 428 LNQQQISQIIQQQQQQSQLGQSQMNQSHSQQQLQQMQQQLQQQPQQQMQQQQQQQQQMQI 487

Query: 348 PHQQQAAKAQGSANQKAFPLAPAQTNNTQT-MTQSRAITAEVEEPCSRILSKRSIGDLVN 407
             QQ + +    A QK+  L  +Q   TQ+  T     +++  E  +++L KR I DLV+
Sbjct: 488 NQQQPSPRMLSHAGQKSVSLTGSQPEATQSGTTTPGGSSSQGTEATNQLLGKRKIQDLVS 547

Query: 408 QIDPSERLDPEVEDVLVDLAEEFVESITTFGCSLAKHRKSSTLEAKDILLHLEKNWNLTL 467
           Q+D   +LDP+VED+L+++A++F++S+T+F CSLAKHRKSS LE KDILLHLEKN +LT+
Sbjct: 548 QVDVHAKLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSVLEPKDILLHLEKNLHLTI 607

Query: 468 PGFGSDDIKIFRKPVTNDSHRERLAAVKKSMAASE----MANTRSSAGQAAGN 472
           PGF S+D K   K V  D H++RLA V+  + +S+     +N++ +  QA  N
Sbjct: 608 PGFSSED-KRQTKTVPTDLHKKRLAMVRALLESSKPETNASNSKETMRQAMVN 650

[Close]

BLAST of Sed0015742 vs. TAIR 10
Match: AT1G17440.2 (Transcription initiation factor TFIID subunit A )

HSP 1 Score: 120.9 bits (302), Expect = 2.7e-27
Identity = 136/413 (32.93%), Postives = 198/413 (47.94%), Query Frame = 0


Query: 108 AHQANPSHQPAMFSASYGQHFGGLGRGGVGVVSEPASNATPQVRPPMQGMQGLGMLGSSG 167
           A  A  + QP + +AS  Q  G +     G    P S+        +QGMQ +GM+GS  
Sbjct: 248 AGAAQMNIQPQLLAASPRQKSGMV----QGSQFHPGSSG-----QQLQGMQAMGMMGSLN 307

Query: 168 SSSQM-------LQRPVQP-SLRPPSTPSSASQTFQGHGLMRVPS----SSPSSSLPSTS 227
            +SQM        Q+ + P  +R   +  +A  + Q   L R  S    +   S L    
Sbjct: 308 LTSQMRGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGLAQNG 367

Query: 228 Q-GMQP---ANQPWLPSTS------------------------QGKPPLPTPSYRPHASS 287
           Q GM     + Q WL   S                        Q +  L +P     + S
Sbjct: 368 QAGMMQNSLSQQQWLKQMSGITSPNSFRLQPSQRQALLLQQQQQQQQQLSSPQLHQSSMS 427

Query: 288 TAMQQRSHI--PQQQNHPLAPASQPQQISSAPQQQPAAHLQQ--EHFTQQFQPPRSSQGL 347
              QQ S I   QQQ   L  +   Q  S    QQ    LQQ  +   QQ Q  +    +
Sbjct: 428 LNQQQISQIIQQQQQQSQLGQSQMNQSHSQQQLQQMQQQLQQQPQQQMQQQQQQQQQMQI 487

Query: 348 PHQQQAAKAQGSANQKAFPLAPAQTNNTQT-MTQSRAITAEVEEPCSRILSKRSIGDLVN 407
             QQ + +    A QK+  L  +Q   TQ+  T     +++  E  +++L KR I DLV+
Sbjct: 488 NQQQPSPRMLSHAGQKSVSLTGSQPEATQSGTTTPGGSSSQGTEATNQLLGKRKIQDLVS 547

Query: 408 QIDPSERLDPEVEDVLVDLAEEFVESITTFGCSLAKHRKSSTLEAKDILLHLEKNWNLTL 467
           Q+D   +LDP+VED+L+++A++F++S+T+F CSLAKHRKSS LE KDILLHLEKN +LT+
Sbjct: 548 QVDVHAKLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSVLEPKDILLHLEKNLHLTI 607

Query: 468 PGFGSDDIKIFRKPVTNDSHRERLAAVKKSMAASE----MANTRSSAGQAAGN 472
           PGF S+D K   K V  D H++RLA V+  + +S+     +N++ +  QA  N
Sbjct: 608 PGFSSED-KRQTKTVPTDLHKKRLAMVRALLESSKPETNASNSKETMRQAMVN 650

The following BLAST results are available for this feature:

BLAST of Sed0015742 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926039.1	1.7e-204	81.09	transcription initiation factor TFIID subunit 12 [Cucurbita moschata]	[more]
XP_023544738.1	4.9e-204	80.90	transcription initiation factor TFIID subunit 12 [Cucurbita pepo subsp. pepo]	[more]
XP_022978365.1	1.1e-203	80.90	transcription initiation factor TFIID subunit 12 [Cucurbita maxima]	[more]
XP_038883059.1	2.1e-202	79.88	transcription initiation factor TFIID subunit 12 [Benincasa hispida]	[more]
XP_011657695.1	4.0e-198	79.14	transcription initiation factor TFIID subunit 12 [Cucumis sativus] >KGN48255.1 h...	[more]

BLAST of Sed0015742 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SR71	1.5e-94	47.65	Transcription initiation factor TFIID subunit 12 OS=Arabidopsis thaliana OX=3702...	[more]
Q8VE65	1.6e-27	47.12	Transcription initiation factor TFIID subunit 12 OS=Mus musculus OX=10090 GN=Taf...	[more]
Q3T174	7.8e-27	40.15	Transcription initiation factor TFIID subunit 12 OS=Bos taurus OX=9913 GN=TAF12 ...	[more]
Q16514	7.8e-27	40.15	Transcription initiation factor TFIID subunit 12 OS=Homo sapiens OX=9606 GN=TAF1...	[more]
Q91858	1.0e-26	41.54	Transcription initiation factor TFIID subunit 12 OS=Xenopus laevis OX=8355 GN=ta...	[more]

BLAST of Sed0015742 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EDW5	8.2e-205	81.09	transcription initiation factor TFIID subunit 12 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1IPW3	5.3e-204	80.90	transcription initiation factor TFIID subunit 12 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A0A0KEX0	2.0e-198	79.14	TFIID_20kDa domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G452070...	[more]
A0A5A7SKM4	1.3e-197	79.14	Transcription initiation factor TFIID subunit 12 OS=Cucumis melo var. makuwa OX=...	[more]
A0A5D3C687	2.9e-194	78.56	Transcription initiation factor TFIID subunit 12 OS=Cucumis melo var. makuwa OX=...	[more]

BLAST of Sed0015742 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10070.1	1.1e-95	47.65	TBP-associated factor 12	[more]
AT1G17440.1	2.7e-27	32.93	Transcription initiation factor TFIID subunit A	[more]
AT1G17440.2	2.7e-27	32.93	Transcription initiation factor TFIID subunit A	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003228	Transcription initiation factor TFIID subunit 12 domain	PFAM	PF03847	TFIID_20kDa	coord: 353..414 e-value: 1.7E-26 score: 92.5
IPR003228	Transcription initiation factor TFIID subunit 12 domain	CDD	cd07981	TAF12	coord: 352..414 e-value: 1.46074E-31 score: 112.969
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 348..418 e-value: 2.6E-28 score: 100.0
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 350..415
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 242..332
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..332
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..24
None	No IPR available	PANTHER	PTHR12264:SF21	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12	coord: 1..414
IPR037794	Transcription initiation factor TFIID subunit 12	PANTHER	PTHR12264	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12	coord: 1..414

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015742.1	Sed0015742.1	mRNA
Sed0015742.2	Sed0015742.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051123	RNA polymerase II preinitiation complex assembly
biological_process	GO:0006413	translational initiation
biological_process	GO:0006352	DNA-templated transcription, initiation
cellular_component	GO:0000124	SAGA complex
cellular_component	GO:0046695	SLIK (SAGA-like) complex
cellular_component	GO:0005669	transcription factor TFIID complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0017025	TBP-class protein binding
molecular_function	GO:0003743	translation initiation factor activity