Sed0015714 (gene) Chayote v1

Overview
NameSed0015714
Typegene
OrganismSechium edule (Chayote v1)
DescriptionE3 ubiquitin-protein ligase
LocationLG08: 34191839 .. 34193316 (-)
RNA-Seq ExpressionSed0015714
SyntenySed0015714
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCATAGTCACGAATTCCATTCAAAAAATTGATATTTTTATTCTCATTTATTTGTGAGTAGTATTATACTTTACATAAGGTTTGCGATTCCTCCTCCCCTACTTTGAACGAAAAAAAACCCCGTAGATTAATGTTGAAAATTTGTTTGGTTCCTTATGGTGGCATTATTCAATGATTCAACTTTCTCAAAACCTTGGACTTCCCAGCACACAGCTTGTGGGCAGCACACAACTTGTTCATAATCCCTTCAAATCCCCAAATCCAAAACCCCCAAATTCACAGCCCAATCCATGGCGTCACAACCCAATCCCCCCCCAATTCCCCCAATTTCAGAAACCCTAATCCAAAACACAGACCAATCTCAATCTCCACCCACGCCCTTCCTCTTCAGCTTCTCCAACACAAACCCGACCCACCACCCACATCCGACCGACGACCGGATTTTTCTGATCAACCCATTCACCCAAAGCACGGTCGTGATCGAGGGCCGCTCCAGATTGGAAGCGCTTTTGCGCGATTACGGCGGCAGCCCAGGCCAGCCGCCGGCCTCCGCCGCTTCCATTCAATCGCTTCCGACCCTTCAACTCACGCAGCAGGATTTGCCCTGTGATTGTGTGATCTGTTTGGATGATTGCCAGATTGGGGCTCTGGCTAAGGAACTTCCCTGCAAACACAAATTTCATCTCGATTGTATACATAAATGGCTTCGGATTCATGGAAGCTGCCCTGTTTGTAGGTATGAACTTCCTGTTGATGCTGTCAAAAACGATGCTAGGAGGCTTAGGGACATTTGGGTGGGTTTTACTTTCAATAATGATCGGATTGTTGATGATTCTCACCATGAAGTTGAGGGTTAGAAATTGTAGATGTATAGAATAAAGCTTGGTTTTGTTCTTGGCGATCTGTACATTCTTTTGGTTACTATGTACGGTTTTTGTATCTGATGGGTGAACCTTGGAAGATGATGCTGTTTGTTTTCACGAAATTGTGCAGAATTTTGTTTAGTGGATTAATGGTAATCTGAGTAATTAAATACTCTATTGTGGATTGATATTAGAAGTGGTTGAAGTAATTAACTATACCCATTGAGAATTAGTTGTTGATAATAGATAATTAAGGATAACAATGAATTCTGGAAGGGGGTTGTTTACCACTAATTCTTCTAATCATTTCTTTGTGTTGGGTTTGATGAACATCTGCTCTGTTTTCGTAATGAGTTGAAACGAAAGTCAAAAGTGGTGAAATTTACACAATTTTTGTATGGTTTTAGAAAGGTTTTCCATTGCAGTTGAGGTGTTTACTCAGAGACACAACATATCTACTAGCTAATGTGTGTTTGATACGTATCCGACAAGTATTGGAGTGTAAGTCTAGACGTGTGTCGATCATGAACACACAAACCAAACTAAAGTGTTCACTCAGATTTTAGATGCTGAGATTCATTCACTATTTTGGATCCTAATTTCACTCTCATAGCC

mRNA sequence

ATCATAGTCACGAATTCCATTCAAAAAATTGATATTTTTATTCTCATTTATTTGTGAGTAGTATTATACTTTACATAAGGTTTGCGATTCCTCCTCCCCTACTTTGAACGAAAAAAAACCCCGTAGATTAATGTTGAAAATTTGTTTGGTTCCTTATGGTGGCATTATTCAATGATTCAACTTTCTCAAAACCTTGGACTTCCCAGCACACAGCTTGTGGGCAGCACACAACTTGTTCATAATCCCTTCAAATCCCCAAATCCAAAACCCCCAAATTCACAGCCCAATCCATGGCGTCACAACCCAATCCCCCCCCAATTCCCCCAATTTCAGAAACCCTAATCCAAAACACAGACCAATCTCAATCTCCACCCACGCCCTTCCTCTTCAGCTTCTCCAACACAAACCCGACCCACCACCCACATCCGACCGACGACCGGATTTTTCTGATCAACCCATTCACCCAAAGCACGGTCGTGATCGAGGGCCGCTCCAGATTGGAAGCGCTTTTGCGCGATTACGGCGGCAGCCCAGGCCAGCCGCCGGCCTCCGCCGCTTCCATTCAATCGCTTCCGACCCTTCAACTCACGCAGCAGGATTTGCCCTGTGATTGTGTGATCTGTTTGGATGATTGCCAGATTGGGGCTCTGGCTAAGGAACTTCCCTGCAAACACAAATTTCATCTCGATTGTATACATAAATGGCTTCGGATTCATGGAAGCTGCCCTGTTTGTAGGTATGAACTTCCTGTTGATGCTGTCAAAAACGATGCTAGGAGGCTTAGGGACATTTGGGTGGGTTTTACTTTCAATAATGATCGGATTGTTGATGATTCTCACCATGAAGTTGAGGGTTAGAAATTGTAGATGTATAGAATAAAGCTTGGTTTTGTTCTTGGCGATCTGTACATTCTTTTGGTTACTATGTACGGTTTTTGTATCTGATGGGTGAACCTTGGAAGATGATGCTGTTTGTTTTCACGAAATTGTGCAGAATTTTGTTTAGTGGATTAATGGTAATCTGAGTAATTAAATACTCTATTGTGGATTGATATTAGAAGTGGTTGAAGTAATTAACTATACCCATTGAGAATTAGTTGTTGATAATAGATAATTAAGGATAACAATGAATTCTGGAAGGGGGTTGTTTACCACTAATTCTTCTAATCATTTCTTTGTGTTGGGTTTGATGAACATCTGCTCTGTTTTCGTAATGAGTTGAAACGAAAGTCAAAAGTGGTGAAATTTACACAATTTTTGTATGGTTTTAGAAAGGTTTTCCATTGCAGTTGAGGTGTTTACTCAGAGACACAACATATCTACTAGCTAATGTGTGTTTGATACGTATCCGACAAGTATTGGAGTGTAAGTCTAGACGTGTGTCGATCATGAACACACAAACCAAACTAAAGTGTTCACTCAGATTTTAGATGCTGAGATTCATTCACTATTTTGGATCCTAATTTCACTCTCATAGCC

Coding sequence (CDS)

ATGGCGTCACAACCCAATCCCCCCCCAATTCCCCCAATTTCAGAAACCCTAATCCAAAACACAGACCAATCTCAATCTCCACCCACGCCCTTCCTCTTCAGCTTCTCCAACACAAACCCGACCCACCACCCACATCCGACCGACGACCGGATTTTTCTGATCAACCCATTCACCCAAAGCACGGTCGTGATCGAGGGCCGCTCCAGATTGGAAGCGCTTTTGCGCGATTACGGCGGCAGCCCAGGCCAGCCGCCGGCCTCCGCCGCTTCCATTCAATCGCTTCCGACCCTTCAACTCACGCAGCAGGATTTGCCCTGTGATTGTGTGATCTGTTTGGATGATTGCCAGATTGGGGCTCTGGCTAAGGAACTTCCCTGCAAACACAAATTTCATCTCGATTGTATACATAAATGGCTTCGGATTCATGGAAGCTGCCCTGTTTGTAGGTATGAACTTCCTGTTGATGCTGTCAAAAACGATGCTAGGAGGCTTAGGGACATTTGGGTGGGTTTTACTTTCAATAATGATCGGATTGTTGATGATTCTCACCATGAAGTTGAGGGTTAG

Protein sequence

MASQPNPPPIPPISETLIQNTDQSQSPPTPFLFSFSNTNPTHHPHPTDDRIFLINPFTQSTVVIEGRSRLEALLRDYGGSPGQPPASAASIQSLPTLQLTQQDLPCDCVICLDDCQIGALAKELPCKHKFHLDCIHKWLRIHGSCPVCRYELPVDAVKNDARRLRDIWVGFTFNNDRIVDDSHHEVEG
Homology
BLAST of Sed0015714 vs. NCBI nr
Match: XP_023523370.1 (E3 ubiquitin-protein ligase RNF181-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 215.3 bits (547), Expect = 4.5e-52
Identity = 112/195 (57.44%), Postives = 137/195 (70.26%), Query Frame = 0

Query: 1   MASQPNPPPIPPISETLIQNTDQSQSPPTPFLFSFSNTNPTHH-PHPTD---------DR 60
           MAS  N P I  + +TLI N D S     PFLF FS  +P     +P D         DR
Sbjct: 38  MASDSNSPEISSVFDTLIGNRDLSLF--MPFLFGFSAADPLQQSQNPADPDRQNANRSDR 97

Query: 61  IFLINPFTQSTVVIEGRSRLEALLRDYGGSPGQPPASAASIQSLPTLQLTQQDLPCDCVI 120
           IFL+NPFTQS VVIEGRS LEAL+RD GG  GQPPAS ASI++LPT+Q+  ++L C+CVI
Sbjct: 98  IFLVNPFTQSMVVIEGRSSLEALMRDLGGKDGQPPASRASIEALPTVQIMAEELGCECVI 157

Query: 121 CLDDCQIGALAKELPCKHKFHLDCIHKWLRIHGSCPVCRYELP--VDAVKNDARRLRDIW 180
           CLD+ +IGA+AKELPC HKFH DCI KWL +HG+CP+CR +LP  VD   N+ RR R+IW
Sbjct: 158 CLDEWEIGAVAKELPCGHKFHPDCIEKWLGVHGNCPLCRCKLPDDVDRKNNEGRRAREIW 217

Query: 181 VGFTFNNDRIVDDSH 184
           VGF+FNNDR  + S+
Sbjct: 218 VGFSFNNDRRSEGSN 230

BLAST of Sed0015714 vs. NCBI nr
Match: XP_022997776.1 (E3 ubiquitin-protein ligase RNF181-like [Cucurbita maxima])

HSP 1 Score: 214.5 bits (545), Expect = 7.6e-52
Identity = 111/195 (56.92%), Postives = 136/195 (69.74%), Query Frame = 0

Query: 1   MASQPNPPPIPPISETLIQNTDQSQSPPTPFLFSFSNTNPTHH-PHPTD---------DR 60
           MAS  N P I  + +T I N D S     PFLF FS  +P     +P D         DR
Sbjct: 38  MASDSNSPEISSVFDTFIGNRDLSLF--MPFLFGFSTADPLQQSQNPADPDRQNANRSDR 97

Query: 61  IFLINPFTQSTVVIEGRSRLEALLRDYGGSPGQPPASAASIQSLPTLQLTQQDLPCDCVI 120
           IFL+NPFTQS VVIEGRS LEAL+RD GG  GQPPAS ASI++LPT+Q+  ++L C+CVI
Sbjct: 98  IFLVNPFTQSMVVIEGRSSLEALMRDLGGKDGQPPASRASIEALPTVQIMAEELGCECVI 157

Query: 121 CLDDCQIGALAKELPCKHKFHLDCIHKWLRIHGSCPVCRYELP--VDAVKNDARRLRDIW 180
           CLD+ +IGA+AKELPC HKFH DCI KWL +HG+CP+CR +LP  VD   N+ RR R+IW
Sbjct: 158 CLDEWEIGAVAKELPCGHKFHPDCIEKWLGVHGNCPLCRCKLPDDVDRKNNEGRRAREIW 217

Query: 181 VGFTFNNDRIVDDSH 184
           VGF+FNNDR  + S+
Sbjct: 218 VGFSFNNDRRSEGSN 230

BLAST of Sed0015714 vs. NCBI nr
Match: XP_022949551.1 (E3 ubiquitin-protein ligase RNF181-like [Cucurbita moschata])

HSP 1 Score: 210.3 bits (534), Expect = 1.4e-50
Identity = 111/195 (56.92%), Postives = 135/195 (69.23%), Query Frame = 0

Query: 1   MASQPNPPPIPPISETLIQNTDQSQSPPTPFLFSFSNTNPTHH-PHPTD---------DR 60
           MAS  N P I  + +TLI N D S     P LF FS  +P     +P D         DR
Sbjct: 1   MASDSNSPEISSVFDTLIGNRDLSLF--MPVLFGFSAADPLQQSQNPADPDRQNANRSDR 60

Query: 61  IFLINPFTQSTVVIEGRSRLEALLRDYGGSPGQPPASAASIQSLPTLQLTQQDLPCDCVI 120
           IFL+NPFTQS VVIEGRS LEAL+RD GG  GQPPAS ASI++LPT+Q+  ++  C+CVI
Sbjct: 61  IFLVNPFTQSMVVIEGRSSLEALMRDLGGKDGQPPASRASIEALPTVQIMAEESGCECVI 120

Query: 121 CLDDCQIGALAKELPCKHKFHLDCIHKWLRIHGSCPVCRYELP--VDAVKNDARRLRDIW 180
           CLD+ +IGA+AKELPC HKFH DCI KWL IHG+CP+CR +LP  VD   N+ RR R+IW
Sbjct: 121 CLDEWKIGAVAKELPCGHKFHPDCIEKWLGIHGNCPLCRCKLPDDVDRKNNEGRRAREIW 180

Query: 181 VGFTFNNDRIVDDSH 184
           VGF+FNNDR  + S+
Sbjct: 181 VGFSFNNDRRSEGSN 193

BLAST of Sed0015714 vs. NCBI nr
Match: KAG6607122.1 (E3 ubiquitin-protein ligase MPSR1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036814.1 E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.1 bits (531), Expect = 3.2e-50
Identity = 110/195 (56.41%), Postives = 134/195 (68.72%), Query Frame = 0

Query: 1   MASQPNPPPIPPISETLIQNTDQSQSPPTPFLFSFSNTNPTHH-PHPTD---------DR 60
           MAS  N P    + +TLI N D S     PFLF FS  +P     +P D         DR
Sbjct: 1   MASDSNSPETSSVFDTLIGNRDLSLF--MPFLFGFSAADPLQQSQNPADPDRQNANRSDR 60

Query: 61  IFLINPFTQSTVVIEGRSRLEALLRDYGGSPGQPPASAASIQSLPTLQLTQQDLPCDCVI 120
           IFL+NPFTQS VVIEGRS LEAL+RD GG  GQPPAS ASI++LPT+Q+  ++  C+CVI
Sbjct: 61  IFLVNPFTQSMVVIEGRSSLEALMRDLGGKDGQPPASRASIEALPTVQIMAEESGCECVI 120

Query: 121 CLDDCQIGALAKELPCKHKFHLDCIHKWLRIHGSCPVCRYELP--VDAVKNDARRLRDIW 180
           CLD+ +IGA+AKELPC HKFH DCI KWL IHG+CP+CR +LP  VD   N+ RR R+IW
Sbjct: 121 CLDEWEIGAVAKELPCGHKFHPDCIEKWLGIHGNCPLCRCKLPDDVDRKNNEGRRAREIW 180

Query: 181 VGFTFNNDRIVDDSH 184
           VGF+F NDR  + S+
Sbjct: 181 VGFSFTNDRRSEGSN 193

BLAST of Sed0015714 vs. NCBI nr
Match: XP_022972862.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita maxima])

HSP 1 Score: 191.0 bits (484), Expect = 9.0e-45
Identity = 86/136 (63.24%), Postives = 108/136 (79.41%), Query Frame = 0

Query: 49  DRIFLINPFTQSTVVIEGRSRLEALLRDYGGSPGQPPASAASIQSLPTLQLTQQDLPCDC 108
           +RI ++N  TQS +VIEGRSRLEALLRD GG  G P AS ASIQ+LPT+Q+  ++LPC+C
Sbjct: 8   ERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGHPSASKASIQALPTVQVKAEELPCEC 67

Query: 109 VICLDDCQIGALAKELPCKHKFHLDCIHKWLRIHGSCPVCRYELPVDAVKND----ARRL 168
            +CL++ +IG LAKELPC HKFH +CI KWL IHG+CPVCRY++PVD  +ND    ARR 
Sbjct: 68  PVCLNEWEIGCLAKELPCTHKFHRECIQKWLGIHGTCPVCRYKMPVDEEENDAGVEARRA 127

Query: 169 RDIWVGFTFNNDRIVD 181
           R+IWV F+FNNDR V+
Sbjct: 128 REIWVAFSFNNDRRVE 143

BLAST of Sed0015714 vs. ExPASy Swiss-Prot
Match: Q9LQX2 (E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.9e-30
Identity = 69/160 (43.12%), Postives = 97/160 (60.62%), Query Frame = 0

Query: 30  PFLFSFSNTNPTHHPH----PTDDRIFLINPFTQSTVVIEGRSRLEALLRDY--GGSPGQ 89
           PFL  FS+   ++        + +RI L+NPFTQ  +V+EG S +  LLR        G+
Sbjct: 31  PFLLGFSDQESSNGDDDDVASSRERIILVNPFTQGMIVLEGSSGMNPLLRSLLESREEGR 90

Query: 90  PPASAASIQSLPTLQLTQQDLPCDCVICLDDCQIGALAKELPCKHKFHLDCIHKWLRIHG 149
           PPAS ASI ++P +++       +CVICL++ +     KE+PCKH+FH  CI KWL  HG
Sbjct: 91  PPASKASIDAMPIVEI--DGCEGECVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHG 150

Query: 150 SCPVCRYELPVDAVKNDARRL--RDIWVGFTFNNDRIVDD 182
           SCPVCRYE+PVD  +   +R    +IWV F+FN+ R + D
Sbjct: 151 SCPVCRYEMPVDGDEIGKKRNDGNEIWVRFSFNDGRRIRD 188

BLAST of Sed0015714 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.0e-18
Identity = 44/105 (41.90%), Postives = 66/105 (62.86%), Query Frame = 0

Query: 82  GQPPASAASIQSLPTLQLTQQDLPCDCVICLDDCQIGALAKELPCKHKFHLDCIHKWLRI 141
           G PPA   ++++LPT+++ +      C +CLDD ++G+ AK++PC+HKFH  CI  WL +
Sbjct: 176 GTPPAKKEAVEALPTVKIEE---VVSCSVCLDDLEVGSQAKQMPCEHKFHSSCILPWLEL 235

Query: 142 HGSCPVCRYELPVDAVKNDARRLRDIWVGFTFNNDRIVDDSHHEV 187
           H SCPVCR+ELP +  K+    L +       +N   V+DSH EV
Sbjct: 236 HSSCPVCRFELPSEETKD----LNEP------SNIGRVEDSHEEV 267

BLAST of Sed0015714 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.4e-18
Identity = 37/77 (48.05%), Postives = 55/77 (71.43%), Query Frame = 0

Query: 82  GQPPASAASIQSLPTLQLTQQDLPCD---CVICLDDCQIGALAKELPCKHKFHLDCIHKW 141
           G PPAS ++I++LP + +T+ +L  +   C +C+DD + G  AK++PCKH +H DC+  W
Sbjct: 195 GTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPW 254

Query: 142 LRIHGSCPVCRYELPVD 156
           L +H SCPVCR+ELP D
Sbjct: 255 LELHNSCPVCRHELPTD 271

BLAST of Sed0015714 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.3e-17
Identity = 44/112 (39.29%), Postives = 65/112 (58.04%), Query Frame = 0

Query: 63  VIEGRSRLEALLRDYGGSPGQPPASAASIQSLPTLQLTQQDL--PCDCVICLDDCQIGAL 122
           ++E  S++EA     G S G PPAS ++I+SLP ++++   +    +C +C +  +    
Sbjct: 153 LLEQLSQIEASATGIGRS-GNPPASKSAIESLPRVEISDCHIGSEANCAVCTEIFETETE 212

Query: 123 AKELPCKHKFHLDCIHKWLRIHGSCPVCRYELPVDAVKNDARRLRDIWVGFT 173
           A+E+PCKH FH DCI  WL I  SCPVCR+ELP +  +       D  VG T
Sbjct: 213 AREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEPNRRSNNNEEDNAVGMT 263

BLAST of Sed0015714 vs. ExPASy Swiss-Prot
Match: Q8RXD3 (E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana OX=3702 GN=AIP2 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.8e-16
Identity = 42/109 (38.53%), Postives = 60/109 (55.05%), Query Frame = 0

Query: 63  VIEGRSRLEALLRDYGGSPGQPPASAASIQSLPTLQLTQQDL-----PCDCVICLDDCQI 122
           +I G   +   + D GG P  PPAS   ++ LP +  T++ L       +C IC ++  I
Sbjct: 180 LINGLDMIIPDILDDGGPPRAPPASKEVVEKLPVIIFTEELLKKFGAEAECCICKENLVI 239

Query: 123 GALAKELPCKHKFHLDCIHKWLRIHGSCPVCRYELPVDAVKNDARRLRD 167
           G   +ELPCKH FH  C+  WL  H SCP+CR+ELP D  K +  + R+
Sbjct: 240 GDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDQKYENWKERE 288

BLAST of Sed0015714 vs. ExPASy TrEMBL
Match: A0A6J1K8F1 (E3 ubiquitin-protein ligase RNF181-like OS=Cucurbita maxima OX=3661 GN=LOC111492631 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 3.7e-52
Identity = 111/195 (56.92%), Postives = 136/195 (69.74%), Query Frame = 0

Query: 1   MASQPNPPPIPPISETLIQNTDQSQSPPTPFLFSFSNTNPTHH-PHPTD---------DR 60
           MAS  N P I  + +T I N D S     PFLF FS  +P     +P D         DR
Sbjct: 38  MASDSNSPEISSVFDTFIGNRDLSLF--MPFLFGFSTADPLQQSQNPADPDRQNANRSDR 97

Query: 61  IFLINPFTQSTVVIEGRSRLEALLRDYGGSPGQPPASAASIQSLPTLQLTQQDLPCDCVI 120
           IFL+NPFTQS VVIEGRS LEAL+RD GG  GQPPAS ASI++LPT+Q+  ++L C+CVI
Sbjct: 98  IFLVNPFTQSMVVIEGRSSLEALMRDLGGKDGQPPASRASIEALPTVQIMAEELGCECVI 157

Query: 121 CLDDCQIGALAKELPCKHKFHLDCIHKWLRIHGSCPVCRYELP--VDAVKNDARRLRDIW 180
           CLD+ +IGA+AKELPC HKFH DCI KWL +HG+CP+CR +LP  VD   N+ RR R+IW
Sbjct: 158 CLDEWEIGAVAKELPCGHKFHPDCIEKWLGVHGNCPLCRCKLPDDVDRKNNEGRRAREIW 217

Query: 181 VGFTFNNDRIVDDSH 184
           VGF+FNNDR  + S+
Sbjct: 218 VGFSFNNDRRSEGSN 230

BLAST of Sed0015714 vs. ExPASy TrEMBL
Match: A0A6J1GCB1 (E3 ubiquitin-protein ligase RNF181-like OS=Cucurbita moschata OX=3662 GN=LOC111452865 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 7.0e-51
Identity = 111/195 (56.92%), Postives = 135/195 (69.23%), Query Frame = 0

Query: 1   MASQPNPPPIPPISETLIQNTDQSQSPPTPFLFSFSNTNPTHH-PHPTD---------DR 60
           MAS  N P I  + +TLI N D S     P LF FS  +P     +P D         DR
Sbjct: 1   MASDSNSPEISSVFDTLIGNRDLSLF--MPVLFGFSAADPLQQSQNPADPDRQNANRSDR 60

Query: 61  IFLINPFTQSTVVIEGRSRLEALLRDYGGSPGQPPASAASIQSLPTLQLTQQDLPCDCVI 120
           IFL+NPFTQS VVIEGRS LEAL+RD GG  GQPPAS ASI++LPT+Q+  ++  C+CVI
Sbjct: 61  IFLVNPFTQSMVVIEGRSSLEALMRDLGGKDGQPPASRASIEALPTVQIMAEESGCECVI 120

Query: 121 CLDDCQIGALAKELPCKHKFHLDCIHKWLRIHGSCPVCRYELP--VDAVKNDARRLRDIW 180
           CLD+ +IGA+AKELPC HKFH DCI KWL IHG+CP+CR +LP  VD   N+ RR R+IW
Sbjct: 121 CLDEWKIGAVAKELPCGHKFHPDCIEKWLGIHGNCPLCRCKLPDDVDRKNNEGRRAREIW 180

Query: 181 VGFTFNNDRIVDDSH 184
           VGF+FNNDR  + S+
Sbjct: 181 VGFSFNNDRRSEGSN 193

BLAST of Sed0015714 vs. ExPASy TrEMBL
Match: A0A6J1I5Z1 (E3 ubiquitin-protein ligase RING1-like OS=Cucurbita maxima OX=3661 GN=LOC111471372 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 4.4e-45
Identity = 86/136 (63.24%), Postives = 108/136 (79.41%), Query Frame = 0

Query: 49  DRIFLINPFTQSTVVIEGRSRLEALLRDYGGSPGQPPASAASIQSLPTLQLTQQDLPCDC 108
           +RI ++N  TQS +VIEGRSRLEALLRD GG  G P AS ASIQ+LPT+Q+  ++LPC+C
Sbjct: 8   ERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGHPSASKASIQALPTVQVKAEELPCEC 67

Query: 109 VICLDDCQIGALAKELPCKHKFHLDCIHKWLRIHGSCPVCRYELPVDAVKND----ARRL 168
            +CL++ +IG LAKELPC HKFH +CI KWL IHG+CPVCRY++PVD  +ND    ARR 
Sbjct: 68  PVCLNEWEIGCLAKELPCTHKFHRECIQKWLGIHGTCPVCRYKMPVDEEENDAGVEARRA 127

Query: 169 RDIWVGFTFNNDRIVD 181
           R+IWV F+FNNDR V+
Sbjct: 128 REIWVAFSFNNDRRVE 143

BLAST of Sed0015714 vs. ExPASy TrEMBL
Match: A0A6J1DR69 (E3 ubiquitin-protein ligase RNF181 OS=Momordica charantia OX=3673 GN=LOC111023495 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 7.5e-45
Identity = 98/172 (56.98%), Postives = 119/172 (69.19%), Query Frame = 0

Query: 29  TPFLFSFSNT----------NPTHHPHPTDDRIFLINPFTQSTVVIEGRSRLEALLRDYG 88
           TPFLF F+N           NP +      +R FL+NPFTQS VVIEG S LE+LLRD G
Sbjct: 18  TPFLFGFTNNRRDDPNQESRNPANR---ESERFFLVNPFTQSMVVIEGSSALESLLRDLG 77

Query: 89  GSPGQPPASAASIQSLPTLQLTQQDLPCDCVICLDDCQIGALAKELPCKHKFHLDCIHKW 148
              G PPAS ASI++LP +QL ++    +CVICLD+ +IGA AKELPCKHKFH +CI KW
Sbjct: 78  SKDGPPPASKASIEALPAVQLLEEG---ECVICLDEWEIGATAKELPCKHKFHPNCIEKW 137

Query: 149 LRIHGSCPVCRYELPV---DAVKND----ARRLRDIWVGFTFNNDRIVDDSH 184
           L IHGSCP+CR+++PV   D  KND     RRLR+IWVGF+FNND   DDS+
Sbjct: 138 LGIHGSCPICRHKMPVDDGDGKKNDVVGRGRRLREIWVGFSFNNDIRSDDSN 183

BLAST of Sed0015714 vs. ExPASy TrEMBL
Match: A0A6J1G4D3 (E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC111450688 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.7e-44
Identity = 86/136 (63.24%), Postives = 107/136 (78.68%), Query Frame = 0

Query: 49  DRIFLINPFTQSTVVIEGRSRLEALLRDYGGSPGQPPASAASIQSLPTLQLTQQDLPCDC 108
           +RI ++N  TQS +VIEGRSRLEALLRD GG  G P AS ASIQ+LPT+QL  ++LPC+C
Sbjct: 8   ERILVVNLVTQSMIVIEGRSRLEALLRDLGGKEGHPSASKASIQALPTVQLKAEELPCEC 67

Query: 109 VICLDDCQIGALAKELPCKHKFHLDCIHKWLRIHGSCPVCRYELPVDAVKN----DARRL 168
            ICL++ ++G LAKELPC HKFH DCI KWL IHG+CPVCRY++PVD  +N    +ARR 
Sbjct: 68  PICLNEWEMGCLAKELPCTHKFHRDCIQKWLGIHGTCPVCRYKMPVDEKENAGGVEARRA 127

Query: 169 RDIWVGFTFNNDRIVD 181
           R+IWV F+FNND  V+
Sbjct: 128 REIWVAFSFNNDARVE 143

BLAST of Sed0015714 vs. TAIR 10
Match: AT1G26800.1 (RING/U-box superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 2.1e-31
Identity = 69/160 (43.12%), Postives = 97/160 (60.62%), Query Frame = 0

Query: 30  PFLFSFSNTNPTHHPH----PTDDRIFLINPFTQSTVVIEGRSRLEALLRDY--GGSPGQ 89
           PFL  FS+   ++        + +RI L+NPFTQ  +V+EG S +  LLR        G+
Sbjct: 31  PFLLGFSDQESSNGDDDDVASSRERIILVNPFTQGMIVLEGSSGMNPLLRSLLESREEGR 90

Query: 90  PPASAASIQSLPTLQLTQQDLPCDCVICLDDCQIGALAKELPCKHKFHLDCIHKWLRIHG 149
           PPAS ASI ++P +++       +CVICL++ +     KE+PCKH+FH  CI KWL  HG
Sbjct: 91  PPASKASIDAMPIVEI--DGCEGECVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHG 150

Query: 150 SCPVCRYELPVDAVKNDARRL--RDIWVGFTFNNDRIVDD 182
           SCPVCRYE+PVD  +   +R    +IWV F+FN+ R + D
Sbjct: 151 SCPVCRYEMPVDGDEIGKKRNDGNEIWVRFSFNDGRRIRD 188

BLAST of Sed0015714 vs. TAIR 10
Match: AT5G56340.1 (RING/U-box superfamily protein )

HSP 1 Score: 105.1 bits (261), Expect = 6.1e-23
Identity = 51/132 (38.64%), Postives = 74/132 (56.06%), Query Frame = 0

Query: 49  DRIFLINPFTQSTVVIEGRSR--------------------LEALLRDYGGSPGQPPASA 108
           DR+ +INP+ QS VV   +++                    L+ L  +     G PPA  
Sbjct: 183 DRVIMINPYNQSLVVPSDQNQNHPSLTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARK 242

Query: 109 ASIQSLPTLQLTQQDLPCDCVICLDDCQIGALAKELPCKHKFHLDCIHKWLRIHGSCPVC 161
            ++++LPT+++ +   P  C +CLDD + G  AKE+PCKHKFH+ CI  WL +H SCPVC
Sbjct: 243 EAVEALPTVKIME---PLQCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVC 302

BLAST of Sed0015714 vs. TAIR 10
Match: AT1G14200.1 (RING/U-box superfamily protein )

HSP 1 Score: 97.1 bits (240), Expect = 1.7e-20
Identity = 55/176 (31.25%), Postives = 91/176 (51.70%), Query Frame = 0

Query: 1   MASQPNPPPIPPISETLIQNTDQSQSPPTPFLFSFSNTNPTHHPHPTDDRIFLINPFTQS 60
           M+S+ +      + E +IQ      S   P + + +          TD      +P +  
Sbjct: 1   MSSENDFVEFSSMFERIIQGRGDGLSRFLPVIVALAAREDDDDQGSTDQTTRRGDPLSPR 60

Query: 61  TVVIEGRSRLEALLRDYGGSPGQPPASAASIQSLPTLQL--TQQDLPCDCVICLDDCQIG 120
            V+I  RS L+    D GG  G+ PA  + ++++P + +   ++     C ICLD+   G
Sbjct: 61  FVMIGSRSGLDDFFSD-GGKQGRSPALKSEVENMPRVVIGEDKEKYGGSCAICLDEWSKG 120

Query: 121 ALAKELPCKHKFHLDCIHKWLRIHGSCPVCRYELPVDAVKNDARRLRDIWVGFTFN 175
            +A E+PCKHKFH  C+ +WL  H +CP+CRYE+PV+ V+ + +    IW+GF+ N
Sbjct: 121 DVAAEMPCKHKFHSKCVEEWLGRHATCPMCRYEMPVEEVEEEKK--IGIWIGFSIN 173

BLAST of Sed0015714 vs. TAIR 10
Match: AT4G26400.2 (RING/U-box superfamily protein )

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-19
Identity = 45/104 (43.27%), Postives = 63/104 (60.58%), Query Frame = 0

Query: 82  GQPPASAASIQSLPTLQLTQQDLPCDCVICLDDCQIGALAKELPCKHKFHLDCIHKWLRI 141
           G  PA    + +LPT+++++      C ICLDD   G+ AKE+PCKHKFH+ CI  WL +
Sbjct: 218 GSLPARKEVVDNLPTVKISES---LQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLEL 277

Query: 142 HGSCPVCRYELPV-DAVKNDARRLRDIWVGFTFNNDRIVDDSHH 185
           H SCPVCRYELP  D  K +  R R   +    +N+ + DD+ +
Sbjct: 278 HSSCPVCRYELPPDDETKVNPVRPRTRTLEINVSNENVEDDARN 318

BLAST of Sed0015714 vs. TAIR 10
Match: AT4G26400.1 (RING/U-box superfamily protein )

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-19
Identity = 45/104 (43.27%), Postives = 63/104 (60.58%), Query Frame = 0

Query: 82  GQPPASAASIQSLPTLQLTQQDLPCDCVICLDDCQIGALAKELPCKHKFHLDCIHKWLRI 141
           G  PA    + +LPT+++++      C ICLDD   G+ AKE+PCKHKFH+ CI  WL +
Sbjct: 218 GSLPARKEVVDNLPTVKISES---LQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLEL 277

Query: 142 HGSCPVCRYELPV-DAVKNDARRLRDIWVGFTFNNDRIVDDSHH 185
           H SCPVCRYELP  D  K +  R R   +    +N+ + DD+ +
Sbjct: 278 HSSCPVCRYELPPDDETKVNPVRPRTRTLEINVSNENVEDDARN 318

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023523370.14.5e-5257.44E3 ubiquitin-protein ligase RNF181-like [Cucurbita pepo subsp. pepo][more]
XP_022997776.17.6e-5256.92E3 ubiquitin-protein ligase RNF181-like [Cucurbita maxima][more]
XP_022949551.11.4e-5056.92E3 ubiquitin-protein ligase RNF181-like [Cucurbita moschata][more]
KAG6607122.13.2e-5056.41E3 ubiquitin-protein ligase MPSR1, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022972862.19.0e-4563.24E3 ubiquitin-protein ligase RING1-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q9LQX22.9e-3043.13E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 ... [more]
Q6AVN22.0e-1841.90E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI... [more]
P0CH304.4e-1848.05E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV... [more]
Q940T56.3e-1739.29E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ... [more]
Q8RXD31.8e-1638.53E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana OX=3702 GN=AIP2 PE=1 SV... [more]
Match NameE-valueIdentityDescription
A0A6J1K8F13.7e-5256.92E3 ubiquitin-protein ligase RNF181-like OS=Cucurbita maxima OX=3661 GN=LOC111492... [more]
A0A6J1GCB17.0e-5156.92E3 ubiquitin-protein ligase RNF181-like OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
A0A6J1I5Z14.4e-4563.24E3 ubiquitin-protein ligase RING1-like OS=Cucurbita maxima OX=3661 GN=LOC1114713... [more]
A0A6J1DR697.5e-4556.98E3 ubiquitin-protein ligase RNF181 OS=Momordica charantia OX=3673 GN=LOC11102349... [more]
A0A6J1G4D31.7e-4463.24E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC11145... [more]
Match NameE-valueIdentityDescription
AT1G26800.12.1e-3143.13RING/U-box superfamily protein [more]
AT5G56340.16.1e-2338.64RING/U-box superfamily protein [more]
AT1G14200.11.7e-2031.25RING/U-box superfamily protein [more]
AT4G26400.21.1e-1943.27RING/U-box superfamily protein [more]
AT4G26400.11.1e-1943.27RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 108..148
e-value: 1.6E-6
score: 37.7
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 107..149
e-value: 2.7E-10
score: 40.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 108..149
score: 11.987676
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 77..155
e-value: 2.0E-20
score: 74.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..42
NoneNo IPR availablePANTHERPTHR15710:SF100RING/U-BOX SUPERFAMILY PROTEIN-RELATEDcoord: 36..179
NoneNo IPR availablePANTHERPTHR15710E3 UBIQUITIN-PROTEIN LIGASE PRAJAcoord: 36..179
NoneNo IPR availableCDDcd16454RING-H2_PA-TM-RINGcoord: 107..149
e-value: 1.64089E-15
score: 65.4009
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 91..155

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0015714.1Sed0015714.1mRNA