
Sed0015693 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGCAGTGACACTTACCTCGGTTGTTCGCTCTTTATTCGTCGGCATAATACTGCTTGCTATAATAACAGCTATATTCGAAACAGCTGCAGCATCACGTTTACTACCACCATTACGAGCTGCACCTTCAACAACTCCTCATGGCGGCATCCATGAATCTCAGGAGAAGGAAGATCACAATCGCTTCAAGGTTCAGTCAGAAATCGAGGCTGACTATGGCTACTGGAATCCGAACCCCGTGTTTGGGGGAGGATATGCAGGCCCCGTTCCCCATGAGGTCGAAGAATGA ATGGGGGCAGTGACACTTACCTCGGTTGTTCGCTCTTTATTCGTCGGCATAATACTGCTTGCTATAATAACAGCTATATTCGAAACAGCTGCAGCATCACGTTTACTACCACCATTACGAGCTGCACCTTCAACAACTCCTCATGGCGGCATCCATGAATCTCAGGAGAAGGAAGATCACAATCGCTTCAAGGTTCAGTCAGAAATCGAGGCTGACTATGGCTACTGGAATCCGAACCCCGTGTTTGGGGGAGGATATGCAGGCCCCGTTCCCCATGAGGTCGAAGAATGA ATGGGGGCAGTGACACTTACCTCGGTTGTTCGCTCTTTATTCGTCGGCATAATACTGCTTGCTATAATAACAGCTATATTCGAAACAGCTGCAGCATCACGTTTACTACCACCATTACGAGCTGCACCTTCAACAACTCCTCATGGCGGCATCCATGAATCTCAGGAGAAGGAAGATCACAATCGCTTCAAGGTTCAGTCAGAAATCGAGGCTGACTATGGCTACTGGAATCCGAACCCCGTGTTTGGGGGAGGATATGCAGGCCCCGTTCCCCATGAGGTCGAAGAATGA MGAVTLTSVVRSLFVGIILLAIITAIFETAAASRLLPPLRAAPSTTPHGGIHESQEKEDHNRFKVQSEIEADYGYWNPNPVFGGGYAGPVPHEVEE Homology
BLAST of Sed0015693 vs. NCBI nr
Match: KAG6608573.1 (hypothetical protein SDJN03_01915, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 127.5 bits (319), Expect = 6.3e-26 Identity = 66/95 (69.47%), Postives = 75/95 (78.95%), Query Frame = 0
BLAST of Sed0015693 vs. NCBI nr
Match: PON91008.1 (Transmembrane protein [Trema orientale]) HSP 1 Score: 55.8 bits (133), Expect = 2.3e-04 Identity = 42/99 (42.42%), Postives = 60/99 (60.61%), Query Frame = 0
BLAST of Sed0015693 vs. ExPASy TrEMBL
Match: A0A2P5EZP1 (Transmembrane protein OS=Trema orientale OX=63057 GN=TorRG33x02_132260 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.1e-04 Identity = 42/99 (42.42%), Postives = 60/99 (60.61%), Query Frame = 0
BLAST of Sed0015693 vs. TAIR 10
Match: AT1G28375.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 8 Blast hits to 8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 2.9e-05 Identity = 20/37 (54.05%), Postives = 27/37 (72.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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