Sed0015641 (gene) Chayote v1

Overview
NameSed0015641
Typegene
OrganismSechium edule (Chayote v1)
DescriptionRNA-dependent RNA polymerase
LocationLG04: 41167312 .. 41173056 (+)
RNA-Seq ExpressionSed0015641
SyntenySed0015641
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGAAGGTGACTACTATGCGCAGTGTGTTGTGGTGTTTATCCAAATTTAGATTAATGGCGAAAATGGTCCCTTCGAATCCGTTGTCCATTTAAATTCCCCAAATTAAAGAGAGATTAATTTTAATTTGTTTTAATGGCAATTTACTAATCAGCGCCTGATCTTGCTCTTGCAGTTCACTGTTCATCAGACCCTATAATTCCCATTTCTCCCACTTTTTGACTCTATTTTACTTTTTCTGGGTTTGTCTTCAAATTCCCTGTAAGAATCTCAACTTTTCATCTGGGTTTATTAATTCGTGCCTCATAGAGCGCATTTCATGTAAATTTGTTGTGTTTCTGCTGCTCATTTCCCTTTTTGGTACTCTTGGATCGTTTCTTTATATGGGTTTCATTTGGTTTGATGAATCTGTACCGATTGGAGGAGATTTCATGTTTTTATGTATATGGGTTTGTGACTATTTTCTTTTCTCCATCATCAAGTCTTGTTGCTCTGCTTATTTTCTTGGTCTTGTTTGTTTTTTTTTAGTTGGGGTTTGGTCACTGTATTTTAGTTGTGAGTACTCAAGTTGGAAGATCCAGCATTCAAAGTATTTTAGTTTGGTTCGTTTTTGTTTGATGTGTTTTAGTGTATCTTGGCCTATATGTGGGTTGTTTTCGTTTTTCTTTTTTTTTTTCTTCATTTTATTTGAGTTTTGTATCTGCTTCTTAATTATCACTGATTCTAATGTAGGATTTATGTTGGTGTTTGGCTCTTTTGTAGGCTTAAATGTACTGGAATCCTCCCTTCACATTGGAACCATAGTACAATCATATAACATATAAGTGGGGTTTTGTATAAATTAAAGCTTGACTTGGTAGAGCAAGAAAAGAGTGAACAAGTTCTTTTGGATCATATGGGGAAAACAGTTCATATTAGTGGATTTCCTTCACATGTCACGGCAGGCGCCGTCAAGAGTTTTCTCGAGGGTCGTACAGGTGTAGGAACTGTCTATGCCATTAAGGTTAGACCACCTAAGGGAGGAGGAGGAGGTAGAGTATATGCTATTGTTCAATTCACTGGTGTTGCACATGCTGAGTTGATCATTTCCTTAGCTAATCAACGCCTATGGTATGGATCTTCGTATCTTAAGGCTCGAGCGGCTGACACCGATATTGTACCGAAGCCTAGGACATACATACATACCTTGGAAAATTTAACAGTGTGCTTTGGCTGTCAGGTTTCAAGTGAGAAGTTTCATGTTCTATGGGAAGGAGGTGTTGATTTGGTGACTTTTGGAACTGGAATGCGAAAAATGAACTTTCGTCTGATCCATAATTTCGTAGAGTATAGGTTCGAGCTTTCTTATGAAAATATTTGGCAGATACAACTCCACCAGCCGCAACTTCAGTTTACGAAGTATCTTCTGATCCAGGTTTTGTGATTAAATGTCTTTCTAAAGTTGTCTAATATTAATGTTCAAAAGCATTGTTATCTACTCTCAAAATTTGAATGAATGGTAAGTCTCGAACCTAAGATCTTGAGGAGAGCACGCCTTTAAAGTTCAAGTTTTCAACCACTATGCCATCTCTTGGGACATTTGTTTGTGGATTTTGATACATCTGAGGATTGAATTTTTTGTTCATAATCACATTTGAGTTTTGACAGCCTTTTCATGAATCATATAAGCTGAAAATTTTGTATCATTGTTAAATCATCAATCAATCTAAGAGGTTAAGTTGATAAGTTGAGGTAAATTTAATTATATCAATAACACATGCTCTCACATATGTACTTGGAAATTTAAAAATGCTCAACAACTGAAAATTAATTGGGGATAAACGTCTTGGCAGGGTTCACACTTAGTGTGATACCATATTGAATCATTTTTTAAAAAACCAATCAACCCAAAAACTTAAGTTGATAGGTTGAGAAAAATTTAATTATACCAACCACGAACCAACACATTTCATGAATTAAGCTCTGCTTTTCATCAAGCTTAATAGTCTGATTTTAATTGCTATGTTTTTTCATCAGTTATATGGAGCTCCTCGGATATATAAAAAAGTTGCTCCGTCTAGTGGACAGATCTTTGATGACCCTCTTATGAACTTCTTTAAAGAAGTTCCTGATGATCAATGGATTAGAACTGCAGATTTTACTCCATCATGCTCTATTGGACAAGCTTCTTCTTTATGTTTGAAGCTACCTAATGGCCGTCAACTTCCAAACTTTAGACAAAATTTTGCTTATTATGAAGAATTTGAAAATGATTTTGAATTGGTTGATGGAGGCAACGGTTTTTCTTGCTCTGAGGATCTTGTTCCCATGGTTGATTCTCGTCCTAAAGTTCGTCTGCCATTTGAAATTATCTTTAAAGTAAATGTATTGGTTCAAAATGGTTGCATTCCAGGGCCATCACTTGATACTGGTTTCTATCGTTTGGTCGATCCAAGTAGAATAAAAACTGAGTTTGTAGAACATGCCTTGGAAAAATTGTTCCATTTAAAGGAATGCAGCTATGAGCCATCAAGCTTTCTTAGGGAGCAATACAGAAAGTATTTAAGGCATCCTCCAAATTCTCCTGCTATATCATTGGATGCTGGATTAGTATATGTCCGTAGGGTTCAAATAACACCTTGTAAGGTGTACTTCTGTGGTCCTGAAGTCAATGTCTCGAATCGGGTGTTGCGCCATTTTCCTCAAGATCTCGATAACTTTATTCGCGTGTCTTTTGTTGATGAGGAGTGGGATAAAATGCGTTCAATAGATTTATTGCCACGAATGTCTTCTACGATTGAGGATGGTAAAACGGATATCTACAAGAGAATTCTCTCTGTTCTTAGAAATGGCATAGTCATCGGTGATAAGAACTTTGAGTTTCTTGCATTTTCATCGAGTCAATTAAGAGACAATTCTATGTGGATGTTTGCTTCCAGACCTGGCCTTGATGCAGCTGCTATTAGAGAGTGGATGGGTGACTTTCGACATATTAAGAATCCAGCAAAGTATGCCGCTAGATTGGGCCAATCATTTGGCTCATCGACAGAGACTCTTTCAGTGGCTAGACATGAGAGGGAAATTATTCCTGACATAGAGGTTCAACAGGGGGAAGTCAAGTATGTCTTTTCTGATGGAATTGGAAAAATATCAAGCGGTTTCGCTAAAAGAGTTGCTGCAAAATGTGGTTTGCAAGCATTCACCCCATCTGCTTTTCAGATTCGTTATGGCGGTTATAAGGGCGTTGTTGCTGTTGATCCAAACTCGTCTATAAAATTATCTCTTAGGAAGAGTATGTGCAAATTTGAATCAGAGAACACGAAACTCGATGTCTTGGCCTTCAGCAAATATCAACCGTGCTTCCTTAATCGTCAGCTGATTACTCTTTTGTCTACTTTAGGTGTTAGAGATGAAGTTTTTGAGAAAAAACAACGTGAAGCTGTAGAACAATTGGATGCCATATTAACAGATCCATTAATGGCGCAGGAAGCCTTAGAGTTGATGTCTCCCGGGGAGAACACTAACATTCTCAAGGAAATGCTCAAATGTGGCTATAAACCAGATGTTGAGCCTTATCTATCAATGATGTTACAGACTTTCCGGGCGTCAAAGTTGCTAGAATTGCGCACCAAATCGAGAATCTTTATTCCGAACGGGAGAGGGATGATGGGATGTCTTGATGAGACTCGGACCTTGGAATATGGACAGGTATTTGTGCAAATTTCGAGTGCTAGGCATAGAAACTTATCTGAAACCTATGCATTCAATATGAGTGGTTCGGAACACCATTTAGTTATCGAGGGAAATGTAACTGTTGCAAAAAATCCCTGCCTGCACCCTGGCGATGTTCGTGTACTGAAGGCTGTGAATATACCTTGGTTGTATCACATGGTTGACTGTGTAGTTTTTCCTCAAAAAGGATCAAGGTTAGTACATTAACATATGCATCTTTCTTGATTTGGAAAATAAGATCTATTTTCAACTTAAATGCTGGAAAAGCTCCTTCAATGTTCAACTTCATCCATGGAAGATGTTCTTCTAGGCTGTTATTAACATGTCCACTCGGCATAGATTTGTTTCTAAAATAGGTGCTGGGAAAAAAATGCCTGCATAATTCTTTTTTGATGATTTTCCTTGTAACTGATGTAACTAACTTGATGTTGTACTTGTTAATTTAGGCCTCATCCGAATGAATGCTCGGGTAGCGATTTGGATGGTGATATATACTTTGTCTGTTGGGACAATGAATTGATCCCGCCTCGACAAATTACACCGATGGATTATACTCCTGCACCACCTATTCAGTTAGATCGAGATGTCACAATCGAGGTATTTCCACACAAACAATAGCATGCGATGAAAACTTGAAAACTCAATCATGTTTCTTGTTTGAAACATGTCACCTTTTCAGTGTTTTATCTCAATTTTCATCTTCAACTTACAGTGAACTTCAATGTCTGTTTTATAAAATCTATTCGTTTTAAACACTGCCTCTCACTTGAAGAGGAACCACTAATGTATGTATGTTTTTAGTCCTAATTTACAACTACTGCTCTTTACAACAGGATGTTCAAGAATATTTTGTGAACTACATGGTTAATGACAGCCTTGGAATCATTGCCAATGCCCACACTGCCTTTGCGGATAAAGAGCCCTTTAAAGCAAGAAGTTCTCCTTGTGTAGAACTTGCAAAGCTATTCTCCATTGCTGTGGACTTCCCAAAAACTGGAGTAGCAGCTATAATACCTCCTCATTTAAGTGTCAAAGAGTTTCCCGACTTTATGGAGAAGCCTGACCGGCCATCCTACGAATCAAAGAATGTGATTGGAAAACTTTTCCGGGCAGTGAAAGACATTGCACCGAATGTAAGCTACATTAGTTCGTTTACTCAAGATGTAGCGATGCGGTGTTATGACTCTGATATGGAAGCTGAAGGCTTTGAAGATTACATTGCAGACGCCTTCTATTATAAAACCACTTACGATAACAAGTTGGGGAATTTGCTCGATTATTACGGGATCAAGTCCGAGGCCGAGATACTCAGTGGCAGTATTATGAGAATGTCCAAGTCTTTCACCAGGAGAAGAGATGCAGAAGCCATCACCCTGGCTGTAAGGTCCCTAAGGAAGGAGGCTAGGACATGGTTCAATGCGAAAGAAGGCGATCCGGATTCAGGCTCGGATGATTTATTTGCCAAAGCTTCAGCTTGGTACCATGTTACTTATCATCATTCTTATTGGGGCTCTTATAACGAGGGAATGGAACGCGCCCATTATCTGAGCTTCCCATGGTGTGTTTACGACAAACTGATGCAAGTGAAGGATAGTAATTTGAGGAGAAGAGAGAGAGCTTCGAGATTGGCGATTCTCGACAGATTTGGACATGTGTTGAATCTCGGTGGACGTTGAAGAACATGGTATTGATACCGGTTGGTTTCTTGTACCTCTGATACATTTGATGCTCTTTATTTGTAGTTTTCTTGTGAATATTCTTAGTTTTGAAGTGCTGAACTAAGAGAGGAAAACTTGATTATACTTCAAGCTTTGGCATTTGTTTGCAGCAATGTAAATATTGTCTTCTACTTTTGGGAGCTTGTTTGTTTGTACTTTGTAGAGTCTTTTCATTACCATGTTTACTATCCACATTGTCCTCTTAGCTTACTTTTCTTCAACGCAAGCTCATCTCCGCCCCTCATACAATGATTCGATACAAACAATACAAAATTTTCTTGTATAGGCTTGGTTTTTATTTAATTTTCAATATTTTAT

mRNA sequence

GTGAAGGTGACTACTATGCGCAGTGTGTTGTGGTGTTTATCCAAATTTAGATTAATGGCGAAAATGGTCCCTTCGAATCCGTTGTCCATTTAAATTCCCCAAATTAAAGAGAGATTAATTTTAATTTGTTTTAATGGCAATTTACTAATCAGCGCCTGATCTTGCTCTTGCAGTTCACTGTTCATCAGACCCTATAATTCCCATTTCTCCCACTTTTTGACTCTATTTTACTTTTTCTGGGTTTGTCTTCAAATTCCCTGCTTAAATGTACTGGAATCCTCCCTTCACATTGGAACCATAGTACAATCATATAACATATAAGTGGGGTTTTGTATAAATTAAAGCTTGACTTGGTAGAGCAAGAAAAGAGTGAACAAGTTCTTTTGGATCATATGGGGAAAACAGTTCATATTAGTGGATTTCCTTCACATGTCACGGCAGGCGCCGTCAAGAGTTTTCTCGAGGGTCGTACAGGTGTAGGAACTGTCTATGCCATTAAGGTTAGACCACCTAAGGGAGGAGGAGGAGGTAGAGTATATGCTATTGTTCAATTCACTGGTGTTGCACATGCTGAGTTGATCATTTCCTTAGCTAATCAACGCCTATGGTATGGATCTTCGTATCTTAAGGCTCGAGCGGCTGACACCGATATTGTACCGAAGCCTAGGACATACATACATACCTTGGAAAATTTAACAGTGTGCTTTGGCTGTCAGGTTTCAAGTGAGAAGTTTCATGTTCTATGGGAAGGAGGTGTTGATTTGGTGACTTTTGGAACTGGAATGCGAAAAATGAACTTTCGTCTGATCCATAATTTCGTAGAGTATAGGTTCGAGCTTTCTTATGAAAATATTTGGCAGATACAACTCCACCAGCCGCAACTTCAGTTTACGAAGTATCTTCTGATCCAGTTATATGGAGCTCCTCGGATATATAAAAAAGTTGCTCCGTCTAGTGGACAGATCTTTGATGACCCTCTTATGAACTTCTTTAAAGAAGTTCCTGATGATCAATGGATTAGAACTGCAGATTTTACTCCATCATGCTCTATTGGACAAGCTTCTTCTTTATGTTTGAAGCTACCTAATGGCCGTCAACTTCCAAACTTTAGACAAAATTTTGCTTATTATGAAGAATTTGAAAATGATTTTGAATTGGTTGATGGAGGCAACGGTTTTTCTTGCTCTGAGGATCTTGTTCCCATGGTTGATTCTCGTCCTAAAGTTCGTCTGCCATTTGAAATTATCTTTAAAGTAAATGTATTGGTTCAAAATGGTTGCATTCCAGGGCCATCACTTGATACTGGTTTCTATCGTTTGGTCGATCCAAGTAGAATAAAAACTGAGTTTGTAGAACATGCCTTGGAAAAATTGTTCCATTTAAAGGAATGCAGCTATGAGCCATCAAGCTTTCTTAGGGAGCAATACAGAAAGTATTTAAGGCATCCTCCAAATTCTCCTGCTATATCATTGGATGCTGGATTAGTATATGTCCGTAGGGTTCAAATAACACCTTGTAAGGTGTACTTCTGTGGTCCTGAAGTCAATGTCTCGAATCGGGTGTTGCGCCATTTTCCTCAAGATCTCGATAACTTTATTCGCGTGTCTTTTGTTGATGAGGAGTGGGATAAAATGCGTTCAATAGATTTATTGCCACGAATGTCTTCTACGATTGAGGATGGTAAAACGGATATCTACAAGAGAATTCTCTCTGTTCTTAGAAATGGCATAGTCATCGGTGATAAGAACTTTGAGTTTCTTGCATTTTCATCGAGTCAATTAAGAGACAATTCTATGTGGATGTTTGCTTCCAGACCTGGCCTTGATGCAGCTGCTATTAGAGAGTGGATGGGTGACTTTCGACATATTAAGAATCCAGCAAAGTATGCCGCTAGATTGGGCCAATCATTTGGCTCATCGACAGAGACTCTTTCAGTGGCTAGACATGAGAGGGAAATTATTCCTGACATAGAGGTTCAACAGGGGGAAGTCAAGTATGTCTTTTCTGATGGAATTGGAAAAATATCAAGCGGTTTCGCTAAAAGAGTTGCTGCAAAATGTGGTTTGCAAGCATTCACCCCATCTGCTTTTCAGATTCGTTATGGCGGTTATAAGGGCGTTGTTGCTGTTGATCCAAACTCGTCTATAAAATTATCTCTTAGGAAGAGTATGTGCAAATTTGAATCAGAGAACACGAAACTCGATGTCTTGGCCTTCAGCAAATATCAACCGTGCTTCCTTAATCGTCAGCTGATTACTCTTTTGTCTACTTTAGGTGTTAGAGATGAAGTTTTTGAGAAAAAACAACGTGAAGCTGTAGAACAATTGGATGCCATATTAACAGATCCATTAATGGCGCAGGAAGCCTTAGAGTTGATGTCTCCCGGGGAGAACACTAACATTCTCAAGGAAATGCTCAAATGTGGCTATAAACCAGATGTTGAGCCTTATCTATCAATGATGTTACAGACTTTCCGGGCGTCAAAGTTGCTAGAATTGCGCACCAAATCGAGAATCTTTATTCCGAACGGGAGAGGGATGATGGGATGTCTTGATGAGACTCGGACCTTGGAATATGGACAGGTATTTGTGCAAATTTCGAGTGCTAGGCATAGAAACTTATCTGAAACCTATGCATTCAATATGAGTGGTTCGGAACACCATTTAGTTATCGAGGGAAATGTAACTGTTGCAAAAAATCCCTGCCTGCACCCTGGCGATGTTCGTGTACTGAAGGCTGTGAATATACCTTGGTTGTATCACATGGTTGACTGTGTAGTTTTTCCTCAAAAAGGATCAAGGCCTCATCCGAATGAATGCTCGGGTAGCGATTTGGATGGTGATATATACTTTGTCTGTTGGGACAATGAATTGATCCCGCCTCGACAAATTACACCGATGGATTATACTCCTGCACCACCTATTCAGTTAGATCGAGATGTCACAATCGAGGATGTTCAAGAATATTTTGTGAACTACATGGTTAATGACAGCCTTGGAATCATTGCCAATGCCCACACTGCCTTTGCGGATAAAGAGCCCTTTAAAGCAAGAAGTTCTCCTTGTGTAGAACTTGCAAAGCTATTCTCCATTGCTGTGGACTTCCCAAAAACTGGAGTAGCAGCTATAATACCTCCTCATTTAAGTGTCAAAGAGTTTCCCGACTTTATGGAGAAGCCTGACCGGCCATCCTACGAATCAAAGAATGTGATTGGAAAACTTTTCCGGGCAGTGAAAGACATTGCACCGAATGTAAGCTACATTAGTTCGTTTACTCAAGATGTAGCGATGCGGTGTTATGACTCTGATATGGAAGCTGAAGGCTTTGAAGATTACATTGCAGACGCCTTCTATTATAAAACCACTTACGATAACAAGTTGGGGAATTTGCTCGATTATTACGGGATCAAGTCCGAGGCCGAGATACTCAGTGGCAGTATTATGAGAATGTCCAAGTCTTTCACCAGGAGAAGAGATGCAGAAGCCATCACCCTGGCTGTAAGGTCCCTAAGGAAGGAGGCTAGGACATGGTTCAATGCGAAAGAAGGCGATCCGGATTCAGGCTCGGATGATTTATTTGCCAAAGCTTCAGCTTGGTACCATGTTACTTATCATCATTCTTATTGGGGCTCTTATAACGAGGGAATGGAACGCGCCCATTATCTGAGCTTCCCATGGTGTGTTTACGACAAACTGATGCAAGTGAAGGATAGTAATTTGAGGAGAAGAGAGAGAGCTTCGAGATTGGCGATTCTCGACAGATTTGGACATGTGTTGAATCTCGGTGGACGTTGAAGAACATGGTATTGATACCGGTTGGTTTCTTGTACCTCTGATACATTTGATGCTCTTTATTTGTAGTTTTCTTGTGAATATTCTTAGTTTTGAAGTGCTGAACTAAGAGAGGAAAACTTGATTATACTTCAAGCTTTGGCATTTGTTTGCAGCAATGTAAATATTGTCTTCTACTTTTGGGAGCTTGTTTGTTTGTACTTTGTAGAGTCTTTTCATTACCATGTTTACTATCCACATTGTCCTCTTAGCTTACTTTTCTTCAACGCAAGCTCATCTCCGCCCCTCATACAATGATTCGATACAAACAATACAAAATTTTCTTGTATAGGCTTGGTTTTTATTTAATTTTCAATATTTTAT

Coding sequence (CDS)

ATGGGGAAAACAGTTCATATTAGTGGATTTCCTTCACATGTCACGGCAGGCGCCGTCAAGAGTTTTCTCGAGGGTCGTACAGGTGTAGGAACTGTCTATGCCATTAAGGTTAGACCACCTAAGGGAGGAGGAGGAGGTAGAGTATATGCTATTGTTCAATTCACTGGTGTTGCACATGCTGAGTTGATCATTTCCTTAGCTAATCAACGCCTATGGTATGGATCTTCGTATCTTAAGGCTCGAGCGGCTGACACCGATATTGTACCGAAGCCTAGGACATACATACATACCTTGGAAAATTTAACAGTGTGCTTTGGCTGTCAGGTTTCAAGTGAGAAGTTTCATGTTCTATGGGAAGGAGGTGTTGATTTGGTGACTTTTGGAACTGGAATGCGAAAAATGAACTTTCGTCTGATCCATAATTTCGTAGAGTATAGGTTCGAGCTTTCTTATGAAAATATTTGGCAGATACAACTCCACCAGCCGCAACTTCAGTTTACGAAGTATCTTCTGATCCAGTTATATGGAGCTCCTCGGATATATAAAAAAGTTGCTCCGTCTAGTGGACAGATCTTTGATGACCCTCTTATGAACTTCTTTAAAGAAGTTCCTGATGATCAATGGATTAGAACTGCAGATTTTACTCCATCATGCTCTATTGGACAAGCTTCTTCTTTATGTTTGAAGCTACCTAATGGCCGTCAACTTCCAAACTTTAGACAAAATTTTGCTTATTATGAAGAATTTGAAAATGATTTTGAATTGGTTGATGGAGGCAACGGTTTTTCTTGCTCTGAGGATCTTGTTCCCATGGTTGATTCTCGTCCTAAAGTTCGTCTGCCATTTGAAATTATCTTTAAAGTAAATGTATTGGTTCAAAATGGTTGCATTCCAGGGCCATCACTTGATACTGGTTTCTATCGTTTGGTCGATCCAAGTAGAATAAAAACTGAGTTTGTAGAACATGCCTTGGAAAAATTGTTCCATTTAAAGGAATGCAGCTATGAGCCATCAAGCTTTCTTAGGGAGCAATACAGAAAGTATTTAAGGCATCCTCCAAATTCTCCTGCTATATCATTGGATGCTGGATTAGTATATGTCCGTAGGGTTCAAATAACACCTTGTAAGGTGTACTTCTGTGGTCCTGAAGTCAATGTCTCGAATCGGGTGTTGCGCCATTTTCCTCAAGATCTCGATAACTTTATTCGCGTGTCTTTTGTTGATGAGGAGTGGGATAAAATGCGTTCAATAGATTTATTGCCACGAATGTCTTCTACGATTGAGGATGGTAAAACGGATATCTACAAGAGAATTCTCTCTGTTCTTAGAAATGGCATAGTCATCGGTGATAAGAACTTTGAGTTTCTTGCATTTTCATCGAGTCAATTAAGAGACAATTCTATGTGGATGTTTGCTTCCAGACCTGGCCTTGATGCAGCTGCTATTAGAGAGTGGATGGGTGACTTTCGACATATTAAGAATCCAGCAAAGTATGCCGCTAGATTGGGCCAATCATTTGGCTCATCGACAGAGACTCTTTCAGTGGCTAGACATGAGAGGGAAATTATTCCTGACATAGAGGTTCAACAGGGGGAAGTCAAGTATGTCTTTTCTGATGGAATTGGAAAAATATCAAGCGGTTTCGCTAAAAGAGTTGCTGCAAAATGTGGTTTGCAAGCATTCACCCCATCTGCTTTTCAGATTCGTTATGGCGGTTATAAGGGCGTTGTTGCTGTTGATCCAAACTCGTCTATAAAATTATCTCTTAGGAAGAGTATGTGCAAATTTGAATCAGAGAACACGAAACTCGATGTCTTGGCCTTCAGCAAATATCAACCGTGCTTCCTTAATCGTCAGCTGATTACTCTTTTGTCTACTTTAGGTGTTAGAGATGAAGTTTTTGAGAAAAAACAACGTGAAGCTGTAGAACAATTGGATGCCATATTAACAGATCCATTAATGGCGCAGGAAGCCTTAGAGTTGATGTCTCCCGGGGAGAACACTAACATTCTCAAGGAAATGCTCAAATGTGGCTATAAACCAGATGTTGAGCCTTATCTATCAATGATGTTACAGACTTTCCGGGCGTCAAAGTTGCTAGAATTGCGCACCAAATCGAGAATCTTTATTCCGAACGGGAGAGGGATGATGGGATGTCTTGATGAGACTCGGACCTTGGAATATGGACAGGTATTTGTGCAAATTTCGAGTGCTAGGCATAGAAACTTATCTGAAACCTATGCATTCAATATGAGTGGTTCGGAACACCATTTAGTTATCGAGGGAAATGTAACTGTTGCAAAAAATCCCTGCCTGCACCCTGGCGATGTTCGTGTACTGAAGGCTGTGAATATACCTTGGTTGTATCACATGGTTGACTGTGTAGTTTTTCCTCAAAAAGGATCAAGGCCTCATCCGAATGAATGCTCGGGTAGCGATTTGGATGGTGATATATACTTTGTCTGTTGGGACAATGAATTGATCCCGCCTCGACAAATTACACCGATGGATTATACTCCTGCACCACCTATTCAGTTAGATCGAGATGTCACAATCGAGGATGTTCAAGAATATTTTGTGAACTACATGGTTAATGACAGCCTTGGAATCATTGCCAATGCCCACACTGCCTTTGCGGATAAAGAGCCCTTTAAAGCAAGAAGTTCTCCTTGTGTAGAACTTGCAAAGCTATTCTCCATTGCTGTGGACTTCCCAAAAACTGGAGTAGCAGCTATAATACCTCCTCATTTAAGTGTCAAAGAGTTTCCCGACTTTATGGAGAAGCCTGACCGGCCATCCTACGAATCAAAGAATGTGATTGGAAAACTTTTCCGGGCAGTGAAAGACATTGCACCGAATGTAAGCTACATTAGTTCGTTTACTCAAGATGTAGCGATGCGGTGTTATGACTCTGATATGGAAGCTGAAGGCTTTGAAGATTACATTGCAGACGCCTTCTATTATAAAACCACTTACGATAACAAGTTGGGGAATTTGCTCGATTATTACGGGATCAAGTCCGAGGCCGAGATACTCAGTGGCAGTATTATGAGAATGTCCAAGTCTTTCACCAGGAGAAGAGATGCAGAAGCCATCACCCTGGCTGTAAGGTCCCTAAGGAAGGAGGCTAGGACATGGTTCAATGCGAAAGAAGGCGATCCGGATTCAGGCTCGGATGATTTATTTGCCAAAGCTTCAGCTTGGTACCATGTTACTTATCATCATTCTTATTGGGGCTCTTATAACGAGGGAATGGAACGCGCCCATTATCTGAGCTTCCCATGGTGTGTTTACGACAAACTGATGCAAGTGAAGGATAGTAATTTGAGGAGAAGAGAGAGAGCTTCGAGATTGGCGATTCTCGACAGATTTGGACATGTGTTGAATCTCGGTGGACGTTGA

Protein sequence

MGKTVHISGFPSHVTAGAVKSFLEGRTGVGTVYAIKVRPPKGGGGGRVYAIVQFTGVAHAELIISLANQRLWYGSSYLKARAADTDIVPKPRTYIHTLENLTVCFGCQVSSEKFHVLWEGGVDLVTFGTGMRKMNFRLIHNFVEYRFELSYENIWQIQLHQPQLQFTKYLLIQLYGAPRIYKKVAPSSGQIFDDPLMNFFKEVPDDQWIRTADFTPSCSIGQASSLCLKLPNGRQLPNFRQNFAYYEEFENDFELVDGGNGFSCSEDLVPMVDSRPKVRLPFEIIFKVNVLVQNGCIPGPSLDTGFYRLVDPSRIKTEFVEHALEKLFHLKECSYEPSSFLREQYRKYLRHPPNSPAISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDLDNFIRVSFVDEEWDKMRSIDLLPRMSSTIEDGKTDIYKRILSVLRNGIVIGDKNFEFLAFSSSQLRDNSMWMFASRPGLDAAAIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQQGEVKYVFSDGIGKISSGFAKRVAAKCGLQAFTPSAFQIRYGGYKGVVAVDPNSSIKLSLRKSMCKFESENTKLDVLAFSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLMAQEALELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRGMMGCLDETRTLEYGQVFVQISSARHRNLSETYAFNMSGSEHHLVIEGNVTVAKNPCLHPGDVRVLKAVNIPWLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDNELIPPRQITPMDYTPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKLFSIAVDFPKTGVAAIIPPHLSVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPNVSYISSFTQDVAMRCYDSDMEAEGFEDYIADAFYYKTTYDNKLGNLLDYYGIKSEAEILSGSIMRMSKSFTRRRDAEAITLAVRSLRKEARTWFNAKEGDPDSGSDDLFAKASAWYHVTYHHSYWGSYNEGMERAHYLSFPWCVYDKLMQVKDSNLRRRERASRLAILDRFGHVLNLGGR
Homology
[Close]
BLAST of Sed0015641 vs. NCBI nr
Match: KAG6599933.1 (RNA-dependent RNA polymerase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 2056.6 bits (5327), Expect = 0.0e+00
Identity = 999/1133 (88.17%), Postives = 1062/1133 (93.73%), Query Frame = 0 

Query: 1    MGKTVHISGFPSHVTAGAVKSFLEGRTGVGTVYAIKVRPPKGGGGGRVYAIVQFTGVAHA 60
            MGKTVHISGFPSH TA +VKSFLE RTG+G+VYAIKVRPPK GGG RVYAIVQF G A A
Sbjct: 988  MGKTVHISGFPSHATADSVKSFLELRTGLGSVYAIKVRPPK-GGGSRVYAIVQFIGAAQA 1047

Query: 61   ELIISLANQRLWYGSSYLKARAADTDIVPKPRTYIHTLENLTVCFGCQVSSEKFHVLWEG 120
            ELIISLANQRLWYGSSYLKARAAD DIVPKPRTY+HTLE+LT+CFGCQ+SSEKFHVLWEG
Sbjct: 1048 ELIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLEDLTLCFGCQISSEKFHVLWEG 1107

Query: 121  GVDLVTFGTGMRKMNFRLIHNFVEYRFELSYENIWQIQLHQPQLQFTKYLLIQLYGAPRI 180
             V+LVTFG  MRKMNF LIHNFVEYRF+LSYENIWQIQLH+ Q Q  K LLIQLYGAPRI
Sbjct: 1108 DVELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRI 1167

Query: 181  YKKVAPSSGQIFDDPLMNFFKEVPDDQWIRTADFTPSCSIGQASSLCLKLPNGRQLPNFR 240
            YKKVAPSSGQIFDDPL NFFKEVPDDQW+RTADFTPS SIGQ+SSLCLKLPNGRQLPNFR
Sbjct: 1168 YKKVAPSSGQIFDDPLFNFFKEVPDDQWVRTADFTPSNSIGQSSSLCLKLPNGRQLPNFR 1227

Query: 241  QNFAYYEEFENDFELVDGGNGFSCSEDLVPMVDSRPKVRLPFEIIFKVNVLVQNGCIPGP 300
            ++FAYYEEFE++F+LVDGGNGFSCS+DLVP+VDSRP V LP+EIIFKVNVLVQNGCIPGP
Sbjct: 1228 RHFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSRPNVLLPYEIIFKVNVLVQNGCIPGP 1287

Query: 301  SLDTGFYRLVDPSRIKTEFVEHALEKLFHLKECSYEPSSFLREQYRKYLRHPPNSPAISL 360
            SLDTGFYRLVDPSR++ E+VE+ALEKLFHLKEC YEPSSFL EQY+KY +HP NSPAI+L
Sbjct: 1288 SLDTGFYRLVDPSRMRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIAL 1347

Query: 361  DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDLDNFIRVSFVDEEWDKMRSIDLL 420
            DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHF +DLDNF+RVSFVDEEWDKMRS DLL
Sbjct: 1348 DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLL 1407

Query: 421  PRMSSTIEDGKTDIYKRILSVLRNGIVIGDKNFEFLAFSSSQLRDNSMWMFASRPGLDAA 480
            PRM+S+IE+GKTDIY+RILSVL+NGI IGDK F+FLAFSSSQLR+NS+WMFASRPGLDAA
Sbjct: 1408 PRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAA 1467

Query: 481  AIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQQGEVKYVFSDG 540
             IREWMGDF+HIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQ GEVKYVFSDG
Sbjct: 1468 VIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDG 1527

Query: 541  IGKISSGFAKRVAAKCGLQAFTPSAFQIRYGGYKGVVAVDPNSSIKLSLRKSMCKFESEN 600
            IGKISS FAKRVA+KC L AFTPSAFQIRYGGYKGVVAVDP SS+KLSLRKSMCKFES+N
Sbjct: 1528 IGKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDN 1587

Query: 601  TKLDVLAFSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLMAQEALE 660
            TKLDVL +SKYQPCFLNRQLITLLSTLGV+DEVFEKKQ EA+EQLDAILTDPL AQEALE
Sbjct: 1588 TKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALE 1647

Query: 661  LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRGMMGCL 720
            LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFR SKLLELRTKSRIFIPNGR MMGCL
Sbjct: 1648 LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCL 1707

Query: 721  DETRTLEYGQVFVQISSARHRNLSETYAFNMSGSEHHLVIEGNVTVAKNPCLHPGDVRVL 780
            DET TLEYGQVFVQISSARHR++S+T AF+MSGSE HLVI GNVTVAKNPCLHPGDVRVL
Sbjct: 1708 DETGTLEYGQVFVQISSARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVL 1767

Query: 781  KAVNIPWLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDNELIPPRQITPMDYTP 840
             AVN+P LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWD ELIPPRQI PMDYTP
Sbjct: 1768 NAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTP 1827

Query: 841  APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKLFSI 900
            APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARS+PC+ELAKLFSI
Sbjct: 1828 APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSI 1887

Query: 901  AVDFPKTGVAAIIPPHLSVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPNVSYISSF 960
            AVDFPKTGV AIIP HL+VKEFPDFMEKPDRPSYESKNVIGKLFRAVK IAPN+SYI SF
Sbjct: 1888 AVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKGIAPNISYIRSF 1947

Query: 961  TQDVAMRCYDSDMEAEGFEDYIADAFYYKTTYDNKLGNLLDYYGIKSEAEILSGSIMRMS 1020
            T+DVAMRCYDSDME EGFEDY+ DA Y+KT YD KLGNLLDYYGIKSE+EI SG+IMRMS
Sbjct: 1948 TRDVAMRCYDSDMETEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMS 2007

Query: 1021 KSFTRRRDAEAITLAVRSLRKEARTWFNAKEGDPDSGSDDLFAKASAWYHVTYHHSYWGS 1080
            KSFTRRRDAEAI LA RSLRKEARTWFN KE  PDSGSDDLFAKASAWYHVTYHHSYWGS
Sbjct: 2008 KSFTRRRDAEAINLAARSLRKEARTWFNTKESGPDSGSDDLFAKASAWYHVTYHHSYWGS 2067

Query: 1081 YNEGMERAHYLSFPWCVYDKLMQVKDSNLRRRERASRLAILDRFGHVLNLGGR 1134
            YN+GM+R HYLSFPWCVY KLMQVK++NLRRRE+ASRLA LDRF  VLNL GR
Sbjct: 2068 YNDGMKRDHYLSFPWCVYHKLMQVKENNLRRREKASRLATLDRFSRVLNLDGR 2118

[Close]
BLAST of Sed0015641 vs. NCBI nr
Match: XP_022943173.1 (RNA-dependent RNA polymerase 1-like isoform X2 [Cucurbita moschata] >XP_022943174.1 RNA-dependent RNA polymerase 1-like isoform X2 [Cucurbita moschata] >XP_022943175.1 RNA-dependent RNA polymerase 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 2048.5 bits (5306), Expect = 0.0e+00
Identity = 997/1133 (88.00%), Postives = 1057/1133 (93.29%), Query Frame = 0 

Query: 1    MGKTVHISGFPSHVTAGAVKSFLEGRTGVGTVYAIKVRPPKGGGGGRVYAIVQFTGVAHA 60
            MGKTVHISGFPSH TA +VKSFLE RTG+GTVYAIKVRPPK  GG RVYAIVQF G A A
Sbjct: 1    MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPK-RGGSRVYAIVQFIGAAQA 60

Query: 61   ELIISLANQRLWYGSSYLKARAADTDIVPKPRTYIHTLENLTVCFGCQVSSEKFHVLWEG 120
            ELIISLANQRLWYGSSYLKARAAD DIVPKPRTY+HTLE+LT+CFGCQVSSEKFHVLWEG
Sbjct: 61   ELIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLEDLTLCFGCQVSSEKFHVLWEG 120

Query: 121  GVDLVTFGTGMRKMNFRLIHNFVEYRFELSYENIWQIQLHQPQLQFTKYLLIQLYGAPRI 180
             V+LVTFG  MRKMNF LIHNFVEYRF+LSYENIWQIQLH+ Q Q  K LLIQLYGAPRI
Sbjct: 121  DVELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRI 180

Query: 181  YKKVAPSSGQIFDDPLMNFFKEVPDDQWIRTADFTPSCSIGQASSLCLKLPNGRQLPNFR 240
            YKKVAPSSGQIFDDPL NFFKEVPDDQW+RTADFTPS S+GQ+SSLCLKLPNGRQLPNFR
Sbjct: 181  YKKVAPSSGQIFDDPLFNFFKEVPDDQWVRTADFTPSNSVGQSSSLCLKLPNGRQLPNFR 240

Query: 241  QNFAYYEEFENDFELVDGGNGFSCSEDLVPMVDSRPKVRLPFEIIFKVNVLVQNGCIPGP 300
            ++FAYYEEFE++F+LVDGGN FSCS+DLVP+VDSRP V LP+EIIFKVNVLVQNGCI GP
Sbjct: 241  RHFAYYEEFEDEFKLVDGGNSFSCSDDLVPVVDSRPNVLLPYEIIFKVNVLVQNGCIAGP 300

Query: 301  SLDTGFYRLVDPSRIKTEFVEHALEKLFHLKECSYEPSSFLREQYRKYLRHPPNSPAISL 360
            SLDTGFYRLVDPSRI+ E+VE+ALEKLFHLKEC YEPSSFL EQY+KY +HP NSPAI+L
Sbjct: 301  SLDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIAL 360

Query: 361  DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDLDNFIRVSFVDEEWDKMRSIDLL 420
            D GLVYVRRVQITPCKVYFCGPEVNVSNRVLRHF +DLDNF+RVSFVDEEWDKMRS DLL
Sbjct: 361  DDGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLL 420

Query: 421  PRMSSTIEDGKTDIYKRILSVLRNGIVIGDKNFEFLAFSSSQLRDNSMWMFASRPGLDAA 480
            PRM+S+IE+GKTDIY+RILSVL+NGI IGDK F+FLAFSSSQLR+NS+WMFASRPGLDAA
Sbjct: 421  PRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAA 480

Query: 481  AIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQQGEVKYVFSDG 540
             IREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQ GEVKYVFSDG
Sbjct: 481  VIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDG 540

Query: 541  IGKISSGFAKRVAAKCGLQAFTPSAFQIRYGGYKGVVAVDPNSSIKLSLRKSMCKFESEN 600
            IGKISS FAKRVA+KC L AFTPSAFQIRYGGYKGVVAVDP SS+KLSLRKSMCKFES+N
Sbjct: 541  IGKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDN 600

Query: 601  TKLDVLAFSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLMAQEALE 660
            TKLDVL +SKYQPCFLNRQLITLLSTLGV+DEVFEKKQ EA+EQLDAILTDPL AQEALE
Sbjct: 601  TKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALE 660

Query: 661  LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRGMMGCL 720
            LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFR SKLLELRTKSRIFIPNGR MMGCL
Sbjct: 661  LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCL 720

Query: 721  DETRTLEYGQVFVQISSARHRNLSETYAFNMSGSEHHLVIEGNVTVAKNPCLHPGDVRVL 780
            DET TLEYGQVFVQISS RHR++S+T AF+MSGSE HLVI GNVTVAKNPCLHPGDVRVL
Sbjct: 721  DETGTLEYGQVFVQISSVRHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVL 780

Query: 781  KAVNIPWLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDNELIPPRQITPMDYTP 840
             AVN+P LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWD ELIPPRQI PMDYTP
Sbjct: 781  NAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTP 840

Query: 841  APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKLFSI 900
            APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARS+PC+ELAKLFSI
Sbjct: 841  APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSI 900

Query: 901  AVDFPKTGVAAIIPPHLSVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPNVSYISSF 960
            AVDFPKTGV AIIP HL+VKEFPDFMEKPDRPSYESKNVIGKLFRAVK IAPN+SYI SF
Sbjct: 901  AVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKGIAPNISYIRSF 960

Query: 961  TQDVAMRCYDSDMEAEGFEDYIADAFYYKTTYDNKLGNLLDYYGIKSEAEILSGSIMRMS 1020
            T+DVAMRCYDSDME EGFEDY+ DA Y+KT YD KLGNLLDYYGIKSE+EI SG+IMRMS
Sbjct: 961  TRDVAMRCYDSDMETEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMS 1020

Query: 1021 KSFTRRRDAEAITLAVRSLRKEARTWFNAKEGDPDSGSDDLFAKASAWYHVTYHHSYWGS 1080
            KSFTRRRDAEAI LA RSLRKEARTWFN KE  PDSGSDDLFAKASAWYHVTYHHSYWGS
Sbjct: 1021 KSFTRRRDAEAINLAARSLRKEARTWFNTKESGPDSGSDDLFAKASAWYHVTYHHSYWGS 1080

Query: 1081 YNEGMERAHYLSFPWCVYDKLMQVKDSNLRRRERASRLAILDRFGHVLNLGGR 1134
            YN+GM+R HYLSFPWCVY KLMQVK++NLRRRE+ASRLA LDRF  VLNL GR
Sbjct: 1081 YNDGMKRDHYLSFPWCVYHKLMQVKENNLRRREKASRLATLDRFSRVLNLDGR 1131

[Close]
BLAST of Sed0015641 vs. NCBI nr
Match: XP_022943172.1 (RNA-dependent RNA polymerase 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 2048.5 bits (5306), Expect = 0.0e+00
Identity = 997/1133 (88.00%), Postives = 1057/1133 (93.29%), Query Frame = 0 

Query: 1    MGKTVHISGFPSHVTAGAVKSFLEGRTGVGTVYAIKVRPPKGGGGGRVYAIVQFTGVAHA 60
            MGKTVHISGFPSH TA +VKSFLE RTG+GTVYAIKVRPPK  GG RVYAIVQF G A A
Sbjct: 15   MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPK-RGGSRVYAIVQFIGAAQA 74

Query: 61   ELIISLANQRLWYGSSYLKARAADTDIVPKPRTYIHTLENLTVCFGCQVSSEKFHVLWEG 120
            ELIISLANQRLWYGSSYLKARAAD DIVPKPRTY+HTLE+LT+CFGCQVSSEKFHVLWEG
Sbjct: 75   ELIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLEDLTLCFGCQVSSEKFHVLWEG 134

Query: 121  GVDLVTFGTGMRKMNFRLIHNFVEYRFELSYENIWQIQLHQPQLQFTKYLLIQLYGAPRI 180
             V+LVTFG  MRKMNF LIHNFVEYRF+LSYENIWQIQLH+ Q Q  K LLIQLYGAPRI
Sbjct: 135  DVELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRI 194

Query: 181  YKKVAPSSGQIFDDPLMNFFKEVPDDQWIRTADFTPSCSIGQASSLCLKLPNGRQLPNFR 240
            YKKVAPSSGQIFDDPL NFFKEVPDDQW+RTADFTPS S+GQ+SSLCLKLPNGRQLPNFR
Sbjct: 195  YKKVAPSSGQIFDDPLFNFFKEVPDDQWVRTADFTPSNSVGQSSSLCLKLPNGRQLPNFR 254

Query: 241  QNFAYYEEFENDFELVDGGNGFSCSEDLVPMVDSRPKVRLPFEIIFKVNVLVQNGCIPGP 300
            ++FAYYEEFE++F+LVDGGN FSCS+DLVP+VDSRP V LP+EIIFKVNVLVQNGCI GP
Sbjct: 255  RHFAYYEEFEDEFKLVDGGNSFSCSDDLVPVVDSRPNVLLPYEIIFKVNVLVQNGCIAGP 314

Query: 301  SLDTGFYRLVDPSRIKTEFVEHALEKLFHLKECSYEPSSFLREQYRKYLRHPPNSPAISL 360
            SLDTGFYRLVDPSRI+ E+VE+ALEKLFHLKEC YEPSSFL EQY+KY +HP NSPAI+L
Sbjct: 315  SLDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIAL 374

Query: 361  DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDLDNFIRVSFVDEEWDKMRSIDLL 420
            D GLVYVRRVQITPCKVYFCGPEVNVSNRVLRHF +DLDNF+RVSFVDEEWDKMRS DLL
Sbjct: 375  DDGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLL 434

Query: 421  PRMSSTIEDGKTDIYKRILSVLRNGIVIGDKNFEFLAFSSSQLRDNSMWMFASRPGLDAA 480
            PRM+S+IE+GKTDIY+RILSVL+NGI IGDK F+FLAFSSSQLR+NS+WMFASRPGLDAA
Sbjct: 435  PRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAA 494

Query: 481  AIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQQGEVKYVFSDG 540
             IREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQ GEVKYVFSDG
Sbjct: 495  VIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDG 554

Query: 541  IGKISSGFAKRVAAKCGLQAFTPSAFQIRYGGYKGVVAVDPNSSIKLSLRKSMCKFESEN 600
            IGKISS FAKRVA+KC L AFTPSAFQIRYGGYKGVVAVDP SS+KLSLRKSMCKFES+N
Sbjct: 555  IGKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDN 614

Query: 601  TKLDVLAFSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLMAQEALE 660
            TKLDVL +SKYQPCFLNRQLITLLSTLGV+DEVFEKKQ EA+EQLDAILTDPL AQEALE
Sbjct: 615  TKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALE 674

Query: 661  LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRGMMGCL 720
            LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFR SKLLELRTKSRIFIPNGR MMGCL
Sbjct: 675  LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCL 734

Query: 721  DETRTLEYGQVFVQISSARHRNLSETYAFNMSGSEHHLVIEGNVTVAKNPCLHPGDVRVL 780
            DET TLEYGQVFVQISS RHR++S+T AF+MSGSE HLVI GNVTVAKNPCLHPGDVRVL
Sbjct: 735  DETGTLEYGQVFVQISSVRHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVL 794

Query: 781  KAVNIPWLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDNELIPPRQITPMDYTP 840
             AVN+P LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWD ELIPPRQI PMDYTP
Sbjct: 795  NAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTP 854

Query: 841  APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKLFSI 900
            APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARS+PC+ELAKLFSI
Sbjct: 855  APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSI 914

Query: 901  AVDFPKTGVAAIIPPHLSVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPNVSYISSF 960
            AVDFPKTGV AIIP HL+VKEFPDFMEKPDRPSYESKNVIGKLFRAVK IAPN+SYI SF
Sbjct: 915  AVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKGIAPNISYIRSF 974

Query: 961  TQDVAMRCYDSDMEAEGFEDYIADAFYYKTTYDNKLGNLLDYYGIKSEAEILSGSIMRMS 1020
            T+DVAMRCYDSDME EGFEDY+ DA Y+KT YD KLGNLLDYYGIKSE+EI SG+IMRMS
Sbjct: 975  TRDVAMRCYDSDMETEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMS 1034

Query: 1021 KSFTRRRDAEAITLAVRSLRKEARTWFNAKEGDPDSGSDDLFAKASAWYHVTYHHSYWGS 1080
            KSFTRRRDAEAI LA RSLRKEARTWFN KE  PDSGSDDLFAKASAWYHVTYHHSYWGS
Sbjct: 1035 KSFTRRRDAEAINLAARSLRKEARTWFNTKESGPDSGSDDLFAKASAWYHVTYHHSYWGS 1094

Query: 1081 YNEGMERAHYLSFPWCVYDKLMQVKDSNLRRRERASRLAILDRFGHVLNLGGR 1134
            YN+GM+R HYLSFPWCVY KLMQVK++NLRRRE+ASRLA LDRF  VLNL GR
Sbjct: 1095 YNDGMKRDHYLSFPWCVYHKLMQVKENNLRRREKASRLATLDRFSRVLNLDGR 1145

[Close]
BLAST of Sed0015641 vs. NCBI nr
Match: XP_022994928.1 (probable RNA-dependent RNA polymerase 1 isoform X2 [Cucurbita maxima] >XP_022994935.1 probable RNA-dependent RNA polymerase 1 isoform X2 [Cucurbita maxima] >XP_022994937.1 probable RNA-dependent RNA polymerase 1 isoform X2 [Cucurbita maxima])

HSP 1 Score: 2047.3 bits (5303), Expect = 0.0e+00
Identity = 999/1133 (88.17%), Postives = 1059/1133 (93.47%), Query Frame = 0 

Query: 1    MGKTVHISGFPSHVTAGAVKSFLEGRTGVGTVYAIKVRPPKGGGGGRVYAIVQFTGVAHA 60
            MGKTVHISGFPSH TA +VKSFLE RTG+GTVYAIKVRPPK  GG RVYAIVQFTG A A
Sbjct: 1    MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPK-RGGSRVYAIVQFTGAAQA 60

Query: 61   ELIISLANQRLWYGSSYLKARAADTDIVPKPRTYIHTLENLTVCFGCQVSSEKFHVLWEG 120
            ELIISLANQRLWYGSSYLKARAAD DIVPKPRTY+HTLENLT+CFGCQVSSEKFHVLWEG
Sbjct: 61   ELIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVLWEG 120

Query: 121  GVDLVTFGTGMRKMNFRLIHNFVEYRFELSYENIWQIQLHQPQLQFTKYLLIQLYGAPRI 180
             V+LVTFG  MRKMNF LIHNFVEYRF+LSYENIWQIQLH+ Q Q  K LLIQLYGAPRI
Sbjct: 121  DVELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRI 180

Query: 181  YKKVAPSSGQIFDDPLMNFFKEVPDDQWIRTADFTPSCSIGQASSLCLKLPNGRQLPNFR 240
            YKKVAPSSGQIFDDPL NFFKEVPDDQ +RTADFTPS SIGQ+SSLCLKLPNGRQLPNFR
Sbjct: 181  YKKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLPNFR 240

Query: 241  QNFAYYEEFENDFELVDGGNGFSCSEDLVPMVDSRPKVRLPFEIIFKVNVLVQNGCIPGP 300
            ++FAYYEEFE++F+LVDGGNGFSCS+DLVP+VDS P V LP+EIIFKVNVLVQNGCIPGP
Sbjct: 241  RHFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVLLPYEIIFKVNVLVQNGCIPGP 300

Query: 301  SLDTGFYRLVDPSRIKTEFVEHALEKLFHLKECSYEPSSFLREQYRKYLRHPPNSPAISL 360
            SLDTGFYRLVDPSRI+ E+VE+ALEKLFHLKEC YEPSSFL EQY+KY +HP NSPAI+L
Sbjct: 301  SLDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIAL 360

Query: 361  DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDLDNFIRVSFVDEEWDKMRSIDLL 420
            DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHF +DLDNF+RVSFVDEEWDKMRS DLL
Sbjct: 361  DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLL 420

Query: 421  PRMSSTIEDGKTDIYKRILSVLRNGIVIGDKNFEFLAFSSSQLRDNSMWMFASRPGLDAA 480
            PRM+S+IE+GKTDIY+RILSVL+NGI IGDK F+FLAFSSSQLR+NS+WMFASRPGLDAA
Sbjct: 421  PRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAA 480

Query: 481  AIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQQGEVKYVFSDG 540
             IREWMGDF+HIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQ GEVKYVFSDG
Sbjct: 481  VIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDG 540

Query: 541  IGKISSGFAKRVAAKCGLQAFTPSAFQIRYGGYKGVVAVDPNSSIKLSLRKSMCKFESEN 600
            IGKISS FAKRVA+KC L AFTPSAFQIRYGGYKGVVAVDP SS+KLSLRKSMCKFES+N
Sbjct: 541  IGKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDN 600

Query: 601  TKLDVLAFSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLMAQEALE 660
            TKLDVL +SKYQPCFLNRQLITLLSTLGV+DEVFEKKQ EA+EQLDAILTDPL AQEALE
Sbjct: 601  TKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALE 660

Query: 661  LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRGMMGCL 720
            LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFR SKLLELRTKSRIFIPNGR MMGCL
Sbjct: 661  LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCL 720

Query: 721  DETRTLEYGQVFVQISSARHRNLSETYAFNMSGSEHHLVIEGNVTVAKNPCLHPGDVRVL 780
            DET TLEYGQVFVQIS+ARHR++S+T AF+MSGSE HLVI GNVTVAKNPCLHPGDVRVL
Sbjct: 721  DETGTLEYGQVFVQISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVL 780

Query: 781  KAVNIPWLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDNELIPPRQITPMDYTP 840
             AVN+P LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWD ELIPPRQI PMDYTP
Sbjct: 781  NAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTP 840

Query: 841  APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKLFSI 900
            APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARS+PC+ELAKLFSI
Sbjct: 841  APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSI 900

Query: 901  AVDFPKTGVAAIIPPHLSVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPNVSYISSF 960
            AVDFPKTGV AIIP HL+VKEFPDFMEKPDR SYESKNVIGKLFRAVK IAPN+SYI SF
Sbjct: 901  AVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYIRSF 960

Query: 961  TQDVAMRCYDSDMEAEGFEDYIADAFYYKTTYDNKLGNLLDYYGIKSEAEILSGSIMRMS 1020
            T+DVAMRCYDSDMEAEGFEDY+ DA Y+KT YD KLGNLLDYYGIKSE+EI SG+IMRMS
Sbjct: 961  TRDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMS 1020

Query: 1021 KSFTRRRDAEAITLAVRSLRKEARTWFNAKEGDPDSGSDDLFAKASAWYHVTYHHSYWGS 1080
            KSFTRRRDAEAI LA RSLRKEARTWFN KE   DSGSDDLFAKASAWYHVTYHHSYWGS
Sbjct: 1021 KSFTRRRDAEAINLAARSLRKEARTWFNTKESGLDSGSDDLFAKASAWYHVTYHHSYWGS 1080

Query: 1081 YNEGMERAHYLSFPWCVYDKLMQVKDSNLRRRERASRLAILDRFGHVLNLGGR 1134
            YN+GM+R HYLSFPWCVY KLMQVK++NLR+RERASRLA LDRF  VLNL GR
Sbjct: 1081 YNDGMKRDHYLSFPWCVYHKLMQVKENNLRKRERASRLATLDRFSRVLNLDGR 1131

[Close]
BLAST of Sed0015641 vs. NCBI nr
Match: XP_022994920.1 (probable RNA-dependent RNA polymerase 1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 2047.3 bits (5303), Expect = 0.0e+00
Identity = 999/1133 (88.17%), Postives = 1059/1133 (93.47%), Query Frame = 0 

Query: 1    MGKTVHISGFPSHVTAGAVKSFLEGRTGVGTVYAIKVRPPKGGGGGRVYAIVQFTGVAHA 60
            MGKTVHISGFPSH TA +VKSFLE RTG+GTVYAIKVRPPK  GG RVYAIVQFTG A A
Sbjct: 15   MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPK-RGGSRVYAIVQFTGAAQA 74

Query: 61   ELIISLANQRLWYGSSYLKARAADTDIVPKPRTYIHTLENLTVCFGCQVSSEKFHVLWEG 120
            ELIISLANQRLWYGSSYLKARAAD DIVPKPRTY+HTLENLT+CFGCQVSSEKFHVLWEG
Sbjct: 75   ELIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVLWEG 134

Query: 121  GVDLVTFGTGMRKMNFRLIHNFVEYRFELSYENIWQIQLHQPQLQFTKYLLIQLYGAPRI 180
             V+LVTFG  MRKMNF LIHNFVEYRF+LSYENIWQIQLH+ Q Q  K LLIQLYGAPRI
Sbjct: 135  DVELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRI 194

Query: 181  YKKVAPSSGQIFDDPLMNFFKEVPDDQWIRTADFTPSCSIGQASSLCLKLPNGRQLPNFR 240
            YKKVAPSSGQIFDDPL NFFKEVPDDQ +RTADFTPS SIGQ+SSLCLKLPNGRQLPNFR
Sbjct: 195  YKKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLPNFR 254

Query: 241  QNFAYYEEFENDFELVDGGNGFSCSEDLVPMVDSRPKVRLPFEIIFKVNVLVQNGCIPGP 300
            ++FAYYEEFE++F+LVDGGNGFSCS+DLVP+VDS P V LP+EIIFKVNVLVQNGCIPGP
Sbjct: 255  RHFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVLLPYEIIFKVNVLVQNGCIPGP 314

Query: 301  SLDTGFYRLVDPSRIKTEFVEHALEKLFHLKECSYEPSSFLREQYRKYLRHPPNSPAISL 360
            SLDTGFYRLVDPSRI+ E+VE+ALEKLFHLKEC YEPSSFL EQY+KY +HP NSPAI+L
Sbjct: 315  SLDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIAL 374

Query: 361  DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDLDNFIRVSFVDEEWDKMRSIDLL 420
            DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHF +DLDNF+RVSFVDEEWDKMRS DLL
Sbjct: 375  DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLL 434

Query: 421  PRMSSTIEDGKTDIYKRILSVLRNGIVIGDKNFEFLAFSSSQLRDNSMWMFASRPGLDAA 480
            PRM+S+IE+GKTDIY+RILSVL+NGI IGDK F+FLAFSSSQLR+NS+WMFASRPGLDAA
Sbjct: 435  PRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAA 494

Query: 481  AIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQQGEVKYVFSDG 540
             IREWMGDF+HIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQ GEVKYVFSDG
Sbjct: 495  VIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDG 554

Query: 541  IGKISSGFAKRVAAKCGLQAFTPSAFQIRYGGYKGVVAVDPNSSIKLSLRKSMCKFESEN 600
            IGKISS FAKRVA+KC L AFTPSAFQIRYGGYKGVVAVDP SS+KLSLRKSMCKFES+N
Sbjct: 555  IGKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDN 614

Query: 601  TKLDVLAFSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLMAQEALE 660
            TKLDVL +SKYQPCFLNRQLITLLSTLGV+DEVFEKKQ EA+EQLDAILTDPL AQEALE
Sbjct: 615  TKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALE 674

Query: 661  LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRGMMGCL 720
            LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFR SKLLELRTKSRIFIPNGR MMGCL
Sbjct: 675  LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCL 734

Query: 721  DETRTLEYGQVFVQISSARHRNLSETYAFNMSGSEHHLVIEGNVTVAKNPCLHPGDVRVL 780
            DET TLEYGQVFVQIS+ARHR++S+T AF+MSGSE HLVI GNVTVAKNPCLHPGDVRVL
Sbjct: 735  DETGTLEYGQVFVQISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVL 794

Query: 781  KAVNIPWLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDNELIPPRQITPMDYTP 840
             AVN+P LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWD ELIPPRQI PMDYTP
Sbjct: 795  NAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTP 854

Query: 841  APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKLFSI 900
            APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARS+PC+ELAKLFSI
Sbjct: 855  APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSI 914

Query: 901  AVDFPKTGVAAIIPPHLSVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPNVSYISSF 960
            AVDFPKTGV AIIP HL+VKEFPDFMEKPDR SYESKNVIGKLFRAVK IAPN+SYI SF
Sbjct: 915  AVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYIRSF 974

Query: 961  TQDVAMRCYDSDMEAEGFEDYIADAFYYKTTYDNKLGNLLDYYGIKSEAEILSGSIMRMS 1020
            T+DVAMRCYDSDMEAEGFEDY+ DA Y+KT YD KLGNLLDYYGIKSE+EI SG+IMRMS
Sbjct: 975  TRDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMS 1034

Query: 1021 KSFTRRRDAEAITLAVRSLRKEARTWFNAKEGDPDSGSDDLFAKASAWYHVTYHHSYWGS 1080
            KSFTRRRDAEAI LA RSLRKEARTWFN KE   DSGSDDLFAKASAWYHVTYHHSYWGS
Sbjct: 1035 KSFTRRRDAEAINLAARSLRKEARTWFNTKESGLDSGSDDLFAKASAWYHVTYHHSYWGS 1094

Query: 1081 YNEGMERAHYLSFPWCVYDKLMQVKDSNLRRRERASRLAILDRFGHVLNLGGR 1134
            YN+GM+R HYLSFPWCVY KLMQVK++NLR+RERASRLA LDRF  VLNL GR
Sbjct: 1095 YNDGMKRDHYLSFPWCVYHKLMQVKENNLRKRERASRLATLDRFSRVLNLDGR 1145

[Close]
BLAST of Sed0015641 vs. ExPASy Swiss-Prot
Match: Q9LQV2 (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1)

HSP 1 Score: 1444.9 bits (3739), Expect = 0.0e+00
Identity = 729/1134 (64.29%), Postives = 863/1134 (76.10%), Query Frame = 0 

Query: 1    MGKTVHISGFPSHVTAGAVKSFLEGRTGVGTVYAIKVRPPKGGGGGRVYAIVQFTGVAHA 60
            MGKT+ + GFP+ V+A  VK FLE  TG GTVYAIKVR PK  GG RVYAIVQFT   H 
Sbjct: 1    MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPK-KGGPRVYAIVQFTSERHT 60

Query: 61   ELIISLANQRLWYGSSYLKARAADTDIVPKPRTYIHTLENLTVCFGCQVSSEKFHVLWEG 120
             LII+ A +RL+YG SYLKA   + DIVPKPR  +HT+  L + FGCQVS++KF  LW  
Sbjct: 61   RLIITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSA 120

Query: 121  GVDLVTFGTGMRKMNFRLIHNFVEYRFELSYENIWQIQLHQPQLQFTKYLLIQLYGAPRI 180
                V+FG GMRK++F       +YR ELSYENIWQI LH PQ + +K+L+IQ+ GAP+I
Sbjct: 121  QDVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKI 180

Query: 181  YKKVAPSSGQIFDDPLMNFFKEVPDDQWIRTADFTPSCSIGQASSLCLKLPNGRQLPNFR 240
            ++K       +F   +M+F+ +  D+QWIRT DFT S  IGQ+++ CL+LP    +P+FR
Sbjct: 181  FEKEDQPINLLFG--IMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFR 240

Query: 241  QNFAYYEEFENDFELVDGGNGFSCSED-LVPMVDSRPKVRLPFEIIFKVNVLVQNGCIPG 300
            +NFA Y E      L++ G+ +S + + LVP+VD  P   LPFEI+FK+N LVQN C+ G
Sbjct: 241  ENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNACLSG 300

Query: 301  PSLDTGFYRLVDPSRIKTEFVEHALEKLFHLKECSYEPSSFLREQYRKYLRHP--PNSPA 360
            P+LD  FYRL++  +     ++H LEKLFHL EC YEP+ +LR++Y+K++     P SP 
Sbjct: 301  PALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSPT 360

Query: 361  ISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDLDNFIRVSFVDEEWDKMRSI 420
            ISLD GLVY+ RVQ+TP +VYF GPEVNVSNRVLRH+ + ++NF+RVSFVDE+ +K+RS+
Sbjct: 361  ISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSM 420

Query: 421  DLLPRMSSTIEDGKTDIYKRILSVLRNGIVIGDKNFEFLAFSSSQLRDNSMWMFASRPGL 480
            DL PR S+     +T +Y RI SVLR+GIVIGDK FEFLAFSSSQLR+NS WMFA    +
Sbjct: 421  DLSPRSST---QRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRI 480

Query: 481  DAAAIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQQGEVKYVF 540
             AA IR WMGDF HI+N AKYAARLGQSF SS ETL+V   E E+IPD+E+     +YVF
Sbjct: 481  TAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVF 540

Query: 541  SDGIGKISSGFAKRVAAKCGLQAFTPSAFQIRYGGYKGVVAVDPNSSIKLSLRKSMCKFE 600
            SDGIGKIS+ FA++VA KCGL  F+PSAFQIRYGGYKGVVAVDPNSS KLSLRKSM KFE
Sbjct: 541  SDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKFE 600

Query: 601  SENTKLDVLAFSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLMAQE 660
            SENTKLDVLA+SKYQPC++NRQLITLLSTLGV D VFEKKQRE V++LDAILT PL A E
Sbjct: 601  SENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHE 660

Query: 661  ALELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRGMM 720
            AL LM+PGENTNILK ++ CGYKPD EP+LSMMLQ FRASKLLELRTK+RIFI  GR MM
Sbjct: 661  ALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMM 720

Query: 721  GCLDETRTLEYGQVFVQISSARHRNLSETYAFNMSGSEHHLVIEGNVTVAKNPCLHPGDV 780
            GCLDETRTLEYGQV VQ S                      +I G V VAKNPCLHPGDV
Sbjct: 721  GCLDETRTLEYGQVVVQYSDPMRPG-------------RRFIITGPVVVAKNPCLHPGDV 780

Query: 781  RVLKAVNIPWLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDNELIPPRQITPMD 840
            RVL+AVN+P L HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD EL+PPR   PMD
Sbjct: 781  RVLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPMD 840

Query: 841  YTPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKL 900
            YTP P   LD DVTIE+V+EYF NY+VNDSLGIIANAHTAFADKEP KA S PC+ELAK 
Sbjct: 841  YTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKK 900

Query: 901  FSIAVDFPKTGVAAIIPPHLSVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPNVSYI 960
            FS AVDFPKTGVAA+IP HL VKE+PDFMEKPD+P+YESKNVIGKLFR VK+ AP +  I
Sbjct: 901  FSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISI 960

Query: 961  SSFTQDVAMRCYDSDMEAEGFEDYIADAFYYKTTYDNKLGNLLDYYGIKSEAEILSGSIM 1020
             SFT DVA + YD DME +GFE+Y+ +AFY K  YD KLGNL+DYYGIK+EAEILSG IM
Sbjct: 961  KSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIM 1020

Query: 1021 RMSKSFTRRRDAEAITLAVRSLRKEARTWFNAKEGDPDSGSDDLFAKASAWYHVTYHHSY 1080
            RMSKSFT+RRDAE+I  AVR+LRKE  + FNA E + +       AKASAWYHVTYH SY
Sbjct: 1021 RMSKSFTKRRDAESIGRAVRALRKETLSLFNASEEEENES-----AKASAWYHVTYHSSY 1080

Query: 1081 WGSYNEGMERAHYLSFPWCVYDKLMQVKDSNLRRRERASRLAILDRFGHVLNLG 1132
            WG YNEG+ R H+LSF WCVYDKL+++K +NL RR+R      L+R  HVL  G
Sbjct: 1081 WGLYNEGLNRDHFLSFAWCVYDKLVRIKKTNLGRRQRQE---TLERLDHVLRFG 1107

[Close]
BLAST of Sed0015641 vs. ExPASy Swiss-Prot
Match: Q0DXS3 (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2)

HSP 1 Score: 977.6 bits (2526), Expect = 1.2e-283
Identity = 483/730 (66.16%), Postives = 580/730 (79.45%), Query Frame = 0 

Query: 377  VYFCGPEVNVSNRVLRHFPQDLDNFIRVSFVDEEWDKMRSIDLLPRMSSTIEDGKTDIYK 436
            VYF GPE+NVSNRV+R+F  D++NF+R+SFVDE+ +K+R+ DL PR +S  +  +T +YK
Sbjct: 9    VYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRATDLSPRSASGHDANRTALYK 68

Query: 437  RILSVLRNGIVIGDKNFEFLAFSSSQLRDNSMWMFASRPGLDAAAIREWMGDFRHIKNPA 496
            R+LSVL +GI IG KNFEFLAFSSSQLRDNS WMFASR GL A+ IR WMGDFR+I+N A
Sbjct: 69   RVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMGDFRNIRNVA 128

Query: 497  KYAARLGQSFGSSTETLSVARHEREIIPDIEVQQGEVKYVFSDGIGKISSGFAKRVAAKC 556
            KYAARLGQSF SSTETL V ++E E I DI   +   ++VFSDGIGKISS FA  VA KC
Sbjct: 129  KYAARLGQSFSSSTETLKVQKYEVEEISDI---KNGTQHVFSDGIGKISSAFANEVAMKC 188

Query: 557  GLQAFTPSAFQIRYGGYKGVVAVDPNSSIKLSLRKSMCKFESENTKLDVLAFSKYQPCFL 616
             L+ F PSAFQIRYGGYKGVVAVDP S  KLSLRKSM KF+S+N  +DVLA+SKYQP FL
Sbjct: 189  NLKRFAPSAFQIRYGGYKGVVAVDPTSRWKLSLRKSMLKFQSDNITVDVLAYSKYQPGFL 248

Query: 617  NRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLMAQEALELMSPGENTNILKEMLK 676
            NRQLITLLSTLGVRD VFE+KQ EAV QL+ ++TDP  A EA+ELM  GE TN +KE+L 
Sbjct: 249  NRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEITNAVKELLL 308

Query: 677  CGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRGMMGCLDETRTLEYGQVFVQIS 736
            CGY+PD EPYLSM+LQTFRASKLLEL+TKSRI IP GR MMGCLDETRTL+YGQVF++ +
Sbjct: 309  CGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLKYGQVFIRAT 368

Query: 737  SARHRNLSETYAFNMSGSEHHLVIEGNVTVAKNPCLHPGDVRVLKAVNIPWLYHMVDCVV 796
            S  + N                 + G V +AKNPCLHPGD+R+L AV++P L+HM +CVV
Sbjct: 369  SGVNDN-------------DRFTVTGKVVIAKNPCLHPGDIRILHAVDVPVLHHMFNCVV 428

Query: 797  FPQKGSRPHPNECSGSDLDGDIYFVCWDNELIPPRQITPMDYTPAPPIQLDRDVTIEDVQ 856
            FPQ+G RPHPNECSGSDLDGDIYFV WD  LIPPR +TPMDYTPAP   LD DVTIE+V+
Sbjct: 429  FPQQGPRPHPNECSGSDLDGDIYFVSWDPSLIPPRMVTPMDYTPAPTETLDHDVTIEEVE 488

Query: 857  EYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKLFSIAVDFPKTGVAAIIPPH 916
            EYF NY+VN+SLG+IANAH  FADKE  KA SSPC+ELAKLFSIAVDFPKTGV A+IPP 
Sbjct: 489  EYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVDFPKTGVPALIPPE 548

Query: 917  LSVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPNVSYISSFTQDVAMRCYDSDMEAE 976
            L VKE+PDFMEK D+ +YESK VIGKL+R +K   P++ +   FT++VA R YD+DM  +
Sbjct: 549  LHVKEYPDFMEKLDKVTYESKGVIGKLYREIKKHTPHIKH---FTREVARRSYDTDMIVD 608

Query: 977  GFEDYIADAFYYKTTYDNKLGNLLDYYGIKSEAEILSGSIMRMSKSFTRRRDAEAITLAV 1036
            G+EDYI +A   K  YD KLGNL+D+YGIKSEAEI+SG I++M+K+FT++ DA+AI LAV
Sbjct: 609  GYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAKNFTKKSDADAIRLAV 668

Query: 1037 RSLRKEARTWFNAKEGDPDS-GSDDLFAKASAWYHVTYHHSYWGSYNEGMERAHYLSFPW 1096
            RSLRKEAR+ F+    D +  G D   AKASAWYHVTYH  +WG YNEG ER H++SFPW
Sbjct: 669  RSLRKEARSRFSEMSLDDNGHGHDASEAKASAWYHVTYHPEFWGCYNEGYERPHFISFPW 719

Query: 1097 CVYDKLMQVK 1106
            C+Y+KL+++K
Sbjct: 729  CIYEKLLRIK 719

[Close]
BLAST of Sed0015641 vs. ExPASy Swiss-Prot
Match: O82504 (RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1)

HSP 1 Score: 761.5 bits (1965), Expect = 1.3e-218
Identity = 450/1136 (39.61%), Postives = 663/1136 (58.36%), Query Frame = 0 

Query: 4    TVHISGFPSHVTAGAVKSFLEGRTGVGTVYAIKVRPPKGGGGGRVYAIVQFTGV---AHA 63
            TV IS  P  + A  +  FLE   G  TV+A+++   +     R +A VQFT +   + A
Sbjct: 11   TVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTTLEVKSRA 70

Query: 64   ELIISLANQRLWYGSSYLKARAADTDIVPKPRTYIHTLENLTVCFGCQVSSEK-FHVL-- 123
            +L+ S    +L + +  L+   A  DI+P+P      L+++ +  G   S EK F  L  
Sbjct: 71   QLLSS--QSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEK 130

Query: 124  WEGGVDLVTFGTGMRKMNFRLIHNFVEYRFELSYENIWQIQ---LHQPQLQFTKYLLIQL 183
            W+G    +   T  R++ F +  +   Y+ E+ +E+I +     ++    +   +LL   
Sbjct: 131  WDGVRCWIL--TEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKLK 190

Query: 184  YGAPRIYKKVAPSSGQIFDDPLMNFFKEVPDDQWIRTADFTPSCSIGQASSLCLKLPNGR 243
            YG P+++K+V       F      F KE  D  WIRT DF+ S SIG ++  CL++ NG 
Sbjct: 191  YG-PKVFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGS 250

Query: 244  QLPNFRQNFAYYEEFENDFELVDGGNGFSCSEDLVPMVDSR-PKVRLPFEIIFKVNVLVQ 303
             + +      YY E       VD G  F+ +  +VP++++    +  P+EI+F++N LV 
Sbjct: 251  TMLDIFSGLPYYREDTLSLTYVD-GKTFASAAQIVPLLNAAILGLEFPYEILFQLNALVH 310

Query: 304  NGCIP-GPSLDTGFYRLVDPSRIKTEFVEHALEKLFHLKECSYEPSSFLREQYRKYLRHP 363
               I    + D    +++    ++T  V   L+KL       Y+P  F++ Q +  ++  
Sbjct: 311  AQKISLFAASDMELIKILRGMSLETALV--ILKKLHQQSSICYDPVFFVKTQMQSVVKKM 370

Query: 364  PNSPAIS----LDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDLDNFIRVSFVD 423
             +SPA +     +  ++  +R  +TP K+Y  GPE+  +N V+++F + + +F+RV+FV+
Sbjct: 371  KHSPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVE 430

Query: 424  EEWDKM--RSIDLLPRMSSTIEDGKTDIYKRILSVLRNGIVIGDKNFEFLAFSSSQLRDN 483
            E+W K+   ++ +  +    ++  +T+IY R+LS+L  GI +G K FEFLAFS+SQLR N
Sbjct: 431  EDWSKLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGN 490

Query: 484  SMWMFASRPGLDAAAIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDI 543
            S+WMFAS   + A  IREWMG FR I++ +K AAR+GQ F +S +TL V   + E IPDI
Sbjct: 491  SVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIPDI 550

Query: 544  EVQQGEVKYVFSDGIGKISSGFAKRVAAKCGLQAFTPSAFQIRYGGYKGVVAVDPNSSIK 603
            EV      Y FSDGIGKIS  FAK+VA KCGL +  PSAFQIRYGGYKGV+AVD +S  K
Sbjct: 551  EVTTDGADYCFSDGIGKISLAFAKQVAQKCGL-SHVPSAFQIRYGGYKGVIAVDRSSFRK 610

Query: 604  LSLRKSMCKFESENTKLDVLAFSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLD 663
            LSLR SM KF+S N  L+V  +++  PCFLNR++I LLSTLG+ D +FE  Q   +  L 
Sbjct: 611  LSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLG 670

Query: 664  AILTDPLMAQEALELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKS 723
             +L D   A   L+ +S   + N+L +ML  GY P  EPYLSMML+    S+L EL+++ 
Sbjct: 671  NMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRC 730

Query: 724  RIFIPNGRGMMGCLDETRTLEYGQVFVQISSARHRNLSETYAFNMSGSEHHLVIEGNVTV 783
            RI +P GR ++GC+DE   LEYGQV+V+++  +    S   ++     E   V+ G V V
Sbjct: 731  RILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVIGKVVV 790

Query: 784  AKNPCLHPGDVRVLKAVNIPWLYHM-----VDCVVFPQKGSRPHPNECSGSDLDGDIYFV 843
             KNPCLHPGD+RVL A+   +  H      +DC++FPQKG RPHPNECSG DLDGD +FV
Sbjct: 791  TKNPCLHPGDIRVLDAI---YEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFV 850

Query: 844  CWDNELIPPRQITPMDYTPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADK 903
             WD ++IP     PMDY  + P  +D DVT+E++ ++FV+YM++D+LG+I+ AH   AD+
Sbjct: 851  SWDEKIIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADR 910

Query: 904  EPFKARSSPCVELAKLFSIAVDFPKTGVAAIIPPHLSVKEFPDFMEKPDRPSYESKNVIG 963
            +P KARS  C+ELA L S AVDF KTG  A +P  L  +EFPDF+E+ ++P+Y S++V G
Sbjct: 911  DPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFG 970

Query: 964  KLFRAVKDIAPNVSYISSFTQDVAMRCYDSDMEAEGFEDYIADAFYYKTTYDNKLGNLLD 1023
            KL+RAVK         +     VA   YD  +E  GFE +I  A  ++  Y  KL +L+ 
Sbjct: 971  KLYRAVKSSLAQRKPEAESEDTVA---YDVTLEEAGFESFIETAKAHRDMYGEKLTSLMI 1030

Query: 1024 YYGIKSEAEILSGSI----MRMSKSFTRRRD-AEAITLAVRSLRKEARTWFNAKEGDPDS 1083
            YYG  +E EIL+G +    M +++   R  D  + ITL+V+ L KEA  WF  K  + + 
Sbjct: 1031 YYGAANEEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFE-KSCEDEQ 1090

Query: 1084 GSDDLFAKASAWYHVTYHHSYWGSYNEGMERAHYLSFPWCVYDKLMQVKDSNLRRR 1113
                L   ASAWY+VTY+       N   E+  +LSFPW V D L+ +K  N +R+
Sbjct: 1091 QKKKL---ASAWYYVTYNP------NHRDEKLTFLSFPWIVGDVLLDIKAENAQRQ 1121

[Close]
BLAST of Sed0015641 vs. ExPASy Swiss-Prot
Match: Q7XM31 (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR2 PE=2 SV=1)

HSP 1 Score: 750.0 bits (1935), Expect = 4.0e-215
Identity = 443/1140 (38.86%), Postives = 650/1140 (57.02%), Query Frame = 0 

Query: 4    TVHISGFPSHVTAGAVKSFLEGRTGV-GTVYAIKVRPPKGGGGGRVYAIVQFTGVAHAEL 63
            ++ +S  P    A  + +F +    V G  +A ++     G   R +  VQF   A A  
Sbjct: 11   SLRVSNIPPSAVAAELLAFFDSAVAVAGGAFACEIAAAHRGWLSRGHGTVQFGSAAAAAA 70

Query: 64   IISLANQ-RL-WYGSSYLKARAADTDIVPKPRTYIHTLENLTVCFGCQVSSEKFHV--LW 123
               LA+  RL  +  + L    +  D++P+            +  G +V+   F     W
Sbjct: 71   AAGLASSGRLPRFLGALLSVSPSPVDLLPRASDLSLRAAGAGLVVGDRVAERVFEAADAW 130

Query: 124  EGGVDLVTFGTGMRKMNFRLIHNFVEYRFELSYENIWQIQLHQPQLQFTKYLLIQLYGAP 183
            +G    V    G R+++  L H+   Y+ E+ +E++         L     +L+QL  AP
Sbjct: 131  DGVRAEVI--PGKRRVDLYLEHDSQRYKLEVLFEDMKDCL--GCTLDGMGAILLQLNYAP 190

Query: 184  RIYKKVA-PSSGQIFDDPLMNFFKEVPDDQWIRTADFTPSCSIGQASSLCLKLPNGRQLP 243
            RI+  ++ P+    F D   +  KE     W+R  DFTP+ S G+ S+L LKL     + 
Sbjct: 191  RIHTAISGPAVNSRFMDDRFHACKEDAKFSWVRALDFTPNYSFGRCSTLVLKLGKSALVS 250

Query: 244  NFRQNFAYYEEFENDFEL-VDGGNGFSCSEDLVPMVDSRPKVRLPFEIIFKVNVLVQNGC 303
            +  ++  +     N  EL ++  +G   S ++VP+V       +P+E++F++N L+  G 
Sbjct: 251  DILKSLPF---SGNLGELTMNSMDGVGASSNVVPLVHCPRDYSVPYEVLFRLNSLMHMGK 310

Query: 304  IPGPSLDTGFYRLVDPSRIKTEFVEHALEKLFHLKECSYEPSSFL-REQYRKYLRHP--- 363
            I    ++   ++ +    +  +      EK+  L+   Y P  F+ +E Y     H    
Sbjct: 311  IVAKHVNADLFKAL--QELPVDVSRRIFEKMHKLESTCYGPLQFIQQEAYSMKRSHNVLL 370

Query: 364  PNSPAISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDLDNFIRVSFVDEEWD 423
             N      +  L+   RV ITP K++  GPE  V+N V++H      +F+RV+FVDE+W 
Sbjct: 371  SNEGEGEGERKLMKCYRVNITPSKIFCFGPEEEVTNYVVKHHSAYASDFVRVTFVDEDWS 430

Query: 424  KMRSIDLLPRMSSTIEDG------KTDIYKRILSVLRNGIVIGDKNFEFLAFSSSQLRDN 483
            K+ S      +S+ IE G      KT +Y RILS+L+ G  IG KNFEFLAFS+SQLR N
Sbjct: 431  KLSS----NAISARIEQGFFSKPFKTGLYYRILSILKKGFSIGPKNFEFLAFSASQLRGN 490

Query: 484  SMWMFASRPGLDAAAIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDI 543
            S+WMFAS   L+A  IR WMG F +I++ +K AAR+GQ F SS +T  V R + E+IPDI
Sbjct: 491  SVWMFASNASLNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDVEVIPDI 550

Query: 544  EVQQGEVKYVFSDGIGKISSGFAKRVAAKCGLQAFT-PSAFQIRYGGYKGVVAVDPNSSI 603
            E+     KY+FSDGIGKIS  FAKRVA   GL     PSAFQIRYGGYKGV+A+DP SSI
Sbjct: 551  EITTDGSKYIFSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAIDPMSSI 610

Query: 604  KLSLRKSMCKFESENTKLDVLAFSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQL 663
             LSLR SM KFESE+  L++ ++SK QPC++NR++I+LLSTLG+RDE+F   Q++ + + 
Sbjct: 611  DLSLRPSMKKFESESRMLNITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQDEMRET 670

Query: 664  DAILTDPLMAQEALELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTK 723
            + +LT+  +A   L  +  G  T    +ML  GY+P  EPYLSM+L+  + ++L ++RT+
Sbjct: 671  EEMLTNKEVALSVLGKLG-GSETKTAVKMLLQGYEPSSEPYLSMILKAHQENRLTDIRTR 730

Query: 724  SRIFIPNGRGMMGCLDETRTLEYGQVFVQI--SSARHRNLSETYAFNMSGSEHHLVIEGN 783
             +I +P GR ++GCLDET  LEYGQV+++I  +S   ++ +++Y +N  G    +V  G 
Sbjct: 731  CKIHVPKGRVLIGCLDETGVLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTATVV--GK 790

Query: 784  VTVAKNPCLHPGDVRVLKAVNIPWLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCW 843
            V + KNPCLHPGD+RVL+A+  P L  MVDC+VFPQ+G RPHPNECSG DLDGD+YF+ W
Sbjct: 791  VAITKNPCLHPGDIRVLEAIYDPDLVGMVDCLVFPQRGERPHPNECSGGDLDGDLYFITW 850

Query: 844  DNELIPPRQITPMDYTPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEP 903
            D++LIP +  TPMDYT   P  +D  VT+E++Q++FV+YM+NDSLG I+ AH   AD+ P
Sbjct: 851  DDKLIPEKVDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSP 910

Query: 904  FKARSSPCVELAKLFSIAVDFPKTGVAAIIPPHLSVKEFPDFMEKPDRPSYESKNVIGKL 963
             KARS  C++LA L S+AVDF KTG  A +P  L  +E+PDFME+ ++P Y S  V+GKL
Sbjct: 911  LKARSPECLQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNGVLGKL 970

Query: 964  FRAVKDIAPNVSYISSFTQDVAM--RCYDSDMEAEGFEDYIADAFYYKTTYDNKLGNLLD 1023
            +R+            + +   A     YD D+E  G ++++  A  Y   Y+ KL  L++
Sbjct: 971  YRSAMGHMEKSGDSGALSSSSAQPSPTYDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMN 1030

Query: 1024 YYGIKSEAEILSGSIMRMSKSFTRRRD-------AEAITLAVRSLRKEARTWFNAKEGDP 1083
            YY  + E EIL+G+I   +K    +RD        + I  AV +L +EAR W  +   + 
Sbjct: 1031 YYRAELEDEILTGNI--RNKMLYLKRDNKRYFEMKDRIVAAVDALHREARGWLLSSRKEE 1090

Query: 1084 DSGSDDLFAKASAWYHVTYHHSYWGSYNEGMERAHYLSFPWCVYDKLMQVKDSNLRRRER 1115
            D+        ASAWY VTYH        +      + SFPW   D L+ +K S+  RR R
Sbjct: 1091 DAS-----RMASAWYRVTYH-------PDRRRGKRFWSFPWIACDNLLAIKASSQLRRRR 1120

[Close]
BLAST of Sed0015641 vs. ExPASy Swiss-Prot
Match: Q8LHH9 (Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHL2 PE=2 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 8.1e-168
Identity = 372/999 (37.24%), Postives = 545/999 (54.55%), Query Frame = 0 

Query: 144  EYRFELSYENIWQIQLHQPQLQFTKYLLIQLYGAPRIYKKVAPSSGQIFDDPLMNFFKEV 203
            + + E    ++ +++L++        LL++L  AP ++ + A      F +P + F    
Sbjct: 214  DVKLEFPVRDVLEVRLYRLDCS----LLLRLAAAPLVHYRTADDD---FHEP-VPFDLLD 273

Query: 204  PDDQWIRTADFTPSCSIGQASSLCLKLPNGRQLPNFRQNFAYYEEFENDFELVDGGNGFS 263
             DD WIRT D TPS +IG+     +   + R  P   +   Y    E    +VD G G+ 
Sbjct: 274  DDDPWIRTTDITPSGAIGRCGVYRISF-SARFWPKMDRALDYMR--ERRVAIVDCGGGWG 333

Query: 264  CSEDLV---------PMVD----SRPKVRLPFEIIFKVNVLVQNGCIPGPSLDTGFYRLV 323
                L          PM D     +    L F ++F VN LV  G I    L   F+ L+
Sbjct: 334  PRRGLTVRDELEFGEPMQDVFFCLQHAEGLKFPLLFMVNALVHKGIINQHQLTPEFFSLL 393

Query: 324  DPSRIKTEFVEHALEKLFHLKECSYEPSSFLREQYRKYLRHPPNSPAISLDAGLVYVRRV 383
              S         AL   +  K   ++    L++   +  R+ P      +      VRR+
Sbjct: 394  GRSEENVNVA--ALRDFWGDKFPVFDACGRLKKALNRVARN-PKLLCSKVGDDHAEVRRL 453

Query: 384  QITPCKVYFCGPEVNVSNRVLRHFPQDLDNFIRVSFVDEEWDKMR-------SIDLLPRM 443
             ITP + Y   PEV  SNRVLRH+ +  D F+RV+F+DE    +        +  ++  +
Sbjct: 454  VITPTRAYCLPPEVERSNRVLRHYHEVADRFLRVTFMDEGMQVLNNNVLNSFTAPIVKDL 513

Query: 444  SSTIEDGKTDIYKRILSVLRNGIVIGDKNFEFLAFSSSQLRDNSMWMFASRPGLDAAAIR 503
             S     KT +YKR+  +L  G  +  + + FLAFSS+QLRD S W FA        AIR
Sbjct: 514  MSNFFQQKTTVYKRVRMLLTEGFHMCGRKYSFLAFSSNQLRDKSAWFFAEDRKTTVEAIR 573

Query: 504  EWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQQGEVKYVFSDGIGK 563
            +WMG F   KN AK+AAR+GQ F S+  T+++   E +   D  V     +Y+FSDGIGK
Sbjct: 574  KWMGRFTS-KNVAKHAARMGQCFSSTYATVTMRPDEVDESFDDVVHN---EYIFSDGIGK 633

Query: 564  ISSGFAKRVAAKCGLQAFTPSAFQIRYGGYKGVVAV--DPNSSIKLSLRKSMCKFESENT 623
            I+   A  VA +  L    PSA+QIR+ G+KGV+AV        +L LR SM KFES + 
Sbjct: 634  ITPDLALEVAERLQLTDNPPSAYQIRFAGFKGVIAVWQGHGDGTRLFLRPSMRKFESNHL 693

Query: 624  KLDVLAFSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLMAQEALEL 683
             L+V++++K+QP FLNRQ+I LLS+L V D +F + Q   +  L+ IL+D  +A E L  
Sbjct: 694  VLEVVSWTKFQPGFLNRQIIILLSSLNVPDSIFWQMQETMLSNLNNILSDRDVAFEVL-T 753

Query: 684  MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRGMMGCLD 743
             S  ++ N    ML  G++P  EP+L  ML   R+++L +L  K+RIF+P GR +MGCLD
Sbjct: 754  TSCADDGNTAALMLSAGFEPRTEPHLKAMLLAIRSAQLQDLLEKARIFVPKGRWLMGCLD 813

Query: 744  ETRTLEYGQVFVQISSARHRNLSETYAFNMSGSEHHL-VIEGNVTVAKNPCLHPGDVRVL 803
            E   LE GQ F++ +     +    +    S ++ +  VI G V +AKNPCLHPGDVR+L
Sbjct: 814  ELGVLEQGQCFIRATVPSLNSYFVKHGSRFSSTDKNTEVILGTVVIAKNPCLHPGDVRIL 873

Query: 804  KAVNIPWLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDNELIPP--RQITPMDY 863
            +AV++P L+H+VDC+VFPQKG RPH NE SGSDLDGD+YFV WD +LIPP  +   PMDY
Sbjct: 874  EAVDVPELHHLVDCLVFPQKGERPHANEASGSDLDGDLYFVTWDEKLIPPGKKSWNPMDY 933

Query: 864  TPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKLF 923
            +P    QL R V+  D+ ++F+  M++++LG I NAH   AD   + A    C+ LA+L 
Sbjct: 934  SPPEAKQLPRQVSQHDIIDFFLKNMISENLGRICNAHVVHADLSEYGAMDEKCIHLAELA 993

Query: 924  SIAVDFPKTGVAAIIPPHLSVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPNVSYIS 983
            + AVDFPKTG  AI+PPHL  K +PDFM K D  SY+S+ ++G+L+R++++ A N   +S
Sbjct: 994  ATAVDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQSYKSEKILGRLYRSIQE-ASNGDVVS 1053

Query: 984  SFTQDVAMRCYDSDMEAEGFEDYIADAFYYKTTYDNKLGNLLDYYGIKSEAEILSGSIMR 1043
                      YD D+E  G  D++A A+  K +YD +L  LL  Y +++EAE+++G I  
Sbjct: 1054 QEVCTPNDLPYDIDLEVPGASDFLASAWQCKCSYDAQLSALLSQYRVRTEAELVTGHITF 1113

Query: 1044 MSKSFTRRRD--AEAITLAVRSLRKEARTWFNAKEGDPDSGSDD-----LFAKASAWYHV 1103
            + K+ ++++    + +  A  +LRKE ++ F +   D     DD        KASAWY V
Sbjct: 1114 LVKNSSKKQGDIKDRLKTAYSALRKEFKSTFESIASDQCEIGDDEKNLLYEMKASAWYQV 1173

Query: 1104 TYHHSYWGSYN-----EGMERAHYLSFPWCVYDKLMQVK 1106
            TYH  +          +G E    LSF W   D L ++K
Sbjct: 1174 TYHPKWVEKSRGILGPDGEEIPASLSFAWIPVDYLARIK 1192

[Close]
BLAST of Sed0015641 vs. ExPASy TrEMBL
Match: A0A6J1FXH5 (RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447985 PE=3 SV=1)

HSP 1 Score: 2048.5 bits (5306), Expect = 0.0e+00
Identity = 997/1133 (88.00%), Postives = 1057/1133 (93.29%), Query Frame = 0 

Query: 1    MGKTVHISGFPSHVTAGAVKSFLEGRTGVGTVYAIKVRPPKGGGGGRVYAIVQFTGVAHA 60
            MGKTVHISGFPSH TA +VKSFLE RTG+GTVYAIKVRPPK  GG RVYAIVQF G A A
Sbjct: 1    MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPK-RGGSRVYAIVQFIGAAQA 60

Query: 61   ELIISLANQRLWYGSSYLKARAADTDIVPKPRTYIHTLENLTVCFGCQVSSEKFHVLWEG 120
            ELIISLANQRLWYGSSYLKARAAD DIVPKPRTY+HTLE+LT+CFGCQVSSEKFHVLWEG
Sbjct: 61   ELIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLEDLTLCFGCQVSSEKFHVLWEG 120

Query: 121  GVDLVTFGTGMRKMNFRLIHNFVEYRFELSYENIWQIQLHQPQLQFTKYLLIQLYGAPRI 180
             V+LVTFG  MRKMNF LIHNFVEYRF+LSYENIWQIQLH+ Q Q  K LLIQLYGAPRI
Sbjct: 121  DVELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRI 180

Query: 181  YKKVAPSSGQIFDDPLMNFFKEVPDDQWIRTADFTPSCSIGQASSLCLKLPNGRQLPNFR 240
            YKKVAPSSGQIFDDPL NFFKEVPDDQW+RTADFTPS S+GQ+SSLCLKLPNGRQLPNFR
Sbjct: 181  YKKVAPSSGQIFDDPLFNFFKEVPDDQWVRTADFTPSNSVGQSSSLCLKLPNGRQLPNFR 240

Query: 241  QNFAYYEEFENDFELVDGGNGFSCSEDLVPMVDSRPKVRLPFEIIFKVNVLVQNGCIPGP 300
            ++FAYYEEFE++F+LVDGGN FSCS+DLVP+VDSRP V LP+EIIFKVNVLVQNGCI GP
Sbjct: 241  RHFAYYEEFEDEFKLVDGGNSFSCSDDLVPVVDSRPNVLLPYEIIFKVNVLVQNGCIAGP 300

Query: 301  SLDTGFYRLVDPSRIKTEFVEHALEKLFHLKECSYEPSSFLREQYRKYLRHPPNSPAISL 360
            SLDTGFYRLVDPSRI+ E+VE+ALEKLFHLKEC YEPSSFL EQY+KY +HP NSPAI+L
Sbjct: 301  SLDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIAL 360

Query: 361  DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDLDNFIRVSFVDEEWDKMRSIDLL 420
            D GLVYVRRVQITPCKVYFCGPEVNVSNRVLRHF +DLDNF+RVSFVDEEWDKMRS DLL
Sbjct: 361  DDGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLL 420

Query: 421  PRMSSTIEDGKTDIYKRILSVLRNGIVIGDKNFEFLAFSSSQLRDNSMWMFASRPGLDAA 480
            PRM+S+IE+GKTDIY+RILSVL+NGI IGDK F+FLAFSSSQLR+NS+WMFASRPGLDAA
Sbjct: 421  PRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAA 480

Query: 481  AIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQQGEVKYVFSDG 540
             IREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQ GEVKYVFSDG
Sbjct: 481  VIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDG 540

Query: 541  IGKISSGFAKRVAAKCGLQAFTPSAFQIRYGGYKGVVAVDPNSSIKLSLRKSMCKFESEN 600
            IGKISS FAKRVA+KC L AFTPSAFQIRYGGYKGVVAVDP SS+KLSLRKSMCKFES+N
Sbjct: 541  IGKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDN 600

Query: 601  TKLDVLAFSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLMAQEALE 660
            TKLDVL +SKYQPCFLNRQLITLLSTLGV+DEVFEKKQ EA+EQLDAILTDPL AQEALE
Sbjct: 601  TKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALE 660

Query: 661  LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRGMMGCL 720
            LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFR SKLLELRTKSRIFIPNGR MMGCL
Sbjct: 661  LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCL 720

Query: 721  DETRTLEYGQVFVQISSARHRNLSETYAFNMSGSEHHLVIEGNVTVAKNPCLHPGDVRVL 780
            DET TLEYGQVFVQISS RHR++S+T AF+MSGSE HLVI GNVTVAKNPCLHPGDVRVL
Sbjct: 721  DETGTLEYGQVFVQISSVRHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVL 780

Query: 781  KAVNIPWLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDNELIPPRQITPMDYTP 840
             AVN+P LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWD ELIPPRQI PMDYTP
Sbjct: 781  NAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTP 840

Query: 841  APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKLFSI 900
            APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARS+PC+ELAKLFSI
Sbjct: 841  APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSI 900

Query: 901  AVDFPKTGVAAIIPPHLSVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPNVSYISSF 960
            AVDFPKTGV AIIP HL+VKEFPDFMEKPDRPSYESKNVIGKLFRAVK IAPN+SYI SF
Sbjct: 901  AVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKGIAPNISYIRSF 960

Query: 961  TQDVAMRCYDSDMEAEGFEDYIADAFYYKTTYDNKLGNLLDYYGIKSEAEILSGSIMRMS 1020
            T+DVAMRCYDSDME EGFEDY+ DA Y+KT YD KLGNLLDYYGIKSE+EI SG+IMRMS
Sbjct: 961  TRDVAMRCYDSDMETEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMS 1020

Query: 1021 KSFTRRRDAEAITLAVRSLRKEARTWFNAKEGDPDSGSDDLFAKASAWYHVTYHHSYWGS 1080
            KSFTRRRDAEAI LA RSLRKEARTWFN KE  PDSGSDDLFAKASAWYHVTYHHSYWGS
Sbjct: 1021 KSFTRRRDAEAINLAARSLRKEARTWFNTKESGPDSGSDDLFAKASAWYHVTYHHSYWGS 1080

Query: 1081 YNEGMERAHYLSFPWCVYDKLMQVKDSNLRRRERASRLAILDRFGHVLNLGGR 1134
            YN+GM+R HYLSFPWCVY KLMQVK++NLRRRE+ASRLA LDRF  VLNL GR
Sbjct: 1081 YNDGMKRDHYLSFPWCVYHKLMQVKENNLRRREKASRLATLDRFSRVLNLDGR 1131

[Close]
BLAST of Sed0015641 vs. ExPASy TrEMBL
Match: A0A6J1FSA2 (RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447985 PE=3 SV=1)

HSP 1 Score: 2048.5 bits (5306), Expect = 0.0e+00
Identity = 997/1133 (88.00%), Postives = 1057/1133 (93.29%), Query Frame = 0 

Query: 1    MGKTVHISGFPSHVTAGAVKSFLEGRTGVGTVYAIKVRPPKGGGGGRVYAIVQFTGVAHA 60
            MGKTVHISGFPSH TA +VKSFLE RTG+GTVYAIKVRPPK  GG RVYAIVQF G A A
Sbjct: 15   MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPK-RGGSRVYAIVQFIGAAQA 74

Query: 61   ELIISLANQRLWYGSSYLKARAADTDIVPKPRTYIHTLENLTVCFGCQVSSEKFHVLWEG 120
            ELIISLANQRLWYGSSYLKARAAD DIVPKPRTY+HTLE+LT+CFGCQVSSEKFHVLWEG
Sbjct: 75   ELIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLEDLTLCFGCQVSSEKFHVLWEG 134

Query: 121  GVDLVTFGTGMRKMNFRLIHNFVEYRFELSYENIWQIQLHQPQLQFTKYLLIQLYGAPRI 180
             V+LVTFG  MRKMNF LIHNFVEYRF+LSYENIWQIQLH+ Q Q  K LLIQLYGAPRI
Sbjct: 135  DVELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRI 194

Query: 181  YKKVAPSSGQIFDDPLMNFFKEVPDDQWIRTADFTPSCSIGQASSLCLKLPNGRQLPNFR 240
            YKKVAPSSGQIFDDPL NFFKEVPDDQW+RTADFTPS S+GQ+SSLCLKLPNGRQLPNFR
Sbjct: 195  YKKVAPSSGQIFDDPLFNFFKEVPDDQWVRTADFTPSNSVGQSSSLCLKLPNGRQLPNFR 254

Query: 241  QNFAYYEEFENDFELVDGGNGFSCSEDLVPMVDSRPKVRLPFEIIFKVNVLVQNGCIPGP 300
            ++FAYYEEFE++F+LVDGGN FSCS+DLVP+VDSRP V LP+EIIFKVNVLVQNGCI GP
Sbjct: 255  RHFAYYEEFEDEFKLVDGGNSFSCSDDLVPVVDSRPNVLLPYEIIFKVNVLVQNGCIAGP 314

Query: 301  SLDTGFYRLVDPSRIKTEFVEHALEKLFHLKECSYEPSSFLREQYRKYLRHPPNSPAISL 360
            SLDTGFYRLVDPSRI+ E+VE+ALEKLFHLKEC YEPSSFL EQY+KY +HP NSPAI+L
Sbjct: 315  SLDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIAL 374

Query: 361  DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDLDNFIRVSFVDEEWDKMRSIDLL 420
            D GLVYVRRVQITPCKVYFCGPEVNVSNRVLRHF +DLDNF+RVSFVDEEWDKMRS DLL
Sbjct: 375  DDGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLL 434

Query: 421  PRMSSTIEDGKTDIYKRILSVLRNGIVIGDKNFEFLAFSSSQLRDNSMWMFASRPGLDAA 480
            PRM+S+IE+GKTDIY+RILSVL+NGI IGDK F+FLAFSSSQLR+NS+WMFASRPGLDAA
Sbjct: 435  PRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAA 494

Query: 481  AIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQQGEVKYVFSDG 540
             IREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQ GEVKYVFSDG
Sbjct: 495  VIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDG 554

Query: 541  IGKISSGFAKRVAAKCGLQAFTPSAFQIRYGGYKGVVAVDPNSSIKLSLRKSMCKFESEN 600
            IGKISS FAKRVA+KC L AFTPSAFQIRYGGYKGVVAVDP SS+KLSLRKSMCKFES+N
Sbjct: 555  IGKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDN 614

Query: 601  TKLDVLAFSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLMAQEALE 660
            TKLDVL +SKYQPCFLNRQLITLLSTLGV+DEVFEKKQ EA+EQLDAILTDPL AQEALE
Sbjct: 615  TKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALE 674

Query: 661  LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRGMMGCL 720
            LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFR SKLLELRTKSRIFIPNGR MMGCL
Sbjct: 675  LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCL 734

Query: 721  DETRTLEYGQVFVQISSARHRNLSETYAFNMSGSEHHLVIEGNVTVAKNPCLHPGDVRVL 780
            DET TLEYGQVFVQISS RHR++S+T AF+MSGSE HLVI GNVTVAKNPCLHPGDVRVL
Sbjct: 735  DETGTLEYGQVFVQISSVRHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVL 794

Query: 781  KAVNIPWLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDNELIPPRQITPMDYTP 840
             AVN+P LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWD ELIPPRQI PMDYTP
Sbjct: 795  NAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTP 854

Query: 841  APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKLFSI 900
            APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARS+PC+ELAKLFSI
Sbjct: 855  APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSI 914

Query: 901  AVDFPKTGVAAIIPPHLSVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPNVSYISSF 960
            AVDFPKTGV AIIP HL+VKEFPDFMEKPDRPSYESKNVIGKLFRAVK IAPN+SYI SF
Sbjct: 915  AVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKGIAPNISYIRSF 974

Query: 961  TQDVAMRCYDSDMEAEGFEDYIADAFYYKTTYDNKLGNLLDYYGIKSEAEILSGSIMRMS 1020
            T+DVAMRCYDSDME EGFEDY+ DA Y+KT YD KLGNLLDYYGIKSE+EI SG+IMRMS
Sbjct: 975  TRDVAMRCYDSDMETEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMS 1034

Query: 1021 KSFTRRRDAEAITLAVRSLRKEARTWFNAKEGDPDSGSDDLFAKASAWYHVTYHHSYWGS 1080
            KSFTRRRDAEAI LA RSLRKEARTWFN KE  PDSGSDDLFAKASAWYHVTYHHSYWGS
Sbjct: 1035 KSFTRRRDAEAINLAARSLRKEARTWFNTKESGPDSGSDDLFAKASAWYHVTYHHSYWGS 1094

Query: 1081 YNEGMERAHYLSFPWCVYDKLMQVKDSNLRRRERASRLAILDRFGHVLNLGGR 1134
            YN+GM+R HYLSFPWCVY KLMQVK++NLRRRE+ASRLA LDRF  VLNL GR
Sbjct: 1095 YNDGMKRDHYLSFPWCVYHKLMQVKENNLRRREKASRLATLDRFSRVLNLDGR 1145

[Close]
BLAST of Sed0015641 vs. ExPASy TrEMBL
Match: A0A6J1K2P9 (RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111490498 PE=3 SV=1)

HSP 1 Score: 2047.3 bits (5303), Expect = 0.0e+00
Identity = 999/1133 (88.17%), Postives = 1059/1133 (93.47%), Query Frame = 0 

Query: 1    MGKTVHISGFPSHVTAGAVKSFLEGRTGVGTVYAIKVRPPKGGGGGRVYAIVQFTGVAHA 60
            MGKTVHISGFPSH TA +VKSFLE RTG+GTVYAIKVRPPK  GG RVYAIVQFTG A A
Sbjct: 1    MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPK-RGGSRVYAIVQFTGAAQA 60

Query: 61   ELIISLANQRLWYGSSYLKARAADTDIVPKPRTYIHTLENLTVCFGCQVSSEKFHVLWEG 120
            ELIISLANQRLWYGSSYLKARAAD DIVPKPRTY+HTLENLT+CFGCQVSSEKFHVLWEG
Sbjct: 61   ELIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVLWEG 120

Query: 121  GVDLVTFGTGMRKMNFRLIHNFVEYRFELSYENIWQIQLHQPQLQFTKYLLIQLYGAPRI 180
             V+LVTFG  MRKMNF LIHNFVEYRF+LSYENIWQIQLH+ Q Q  K LLIQLYGAPRI
Sbjct: 121  DVELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRI 180

Query: 181  YKKVAPSSGQIFDDPLMNFFKEVPDDQWIRTADFTPSCSIGQASSLCLKLPNGRQLPNFR 240
            YKKVAPSSGQIFDDPL NFFKEVPDDQ +RTADFTPS SIGQ+SSLCLKLPNGRQLPNFR
Sbjct: 181  YKKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLPNFR 240

Query: 241  QNFAYYEEFENDFELVDGGNGFSCSEDLVPMVDSRPKVRLPFEIIFKVNVLVQNGCIPGP 300
            ++FAYYEEFE++F+LVDGGNGFSCS+DLVP+VDS P V LP+EIIFKVNVLVQNGCIPGP
Sbjct: 241  RHFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVLLPYEIIFKVNVLVQNGCIPGP 300

Query: 301  SLDTGFYRLVDPSRIKTEFVEHALEKLFHLKECSYEPSSFLREQYRKYLRHPPNSPAISL 360
            SLDTGFYRLVDPSRI+ E+VE+ALEKLFHLKEC YEPSSFL EQY+KY +HP NSPAI+L
Sbjct: 301  SLDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIAL 360

Query: 361  DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDLDNFIRVSFVDEEWDKMRSIDLL 420
            DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHF +DLDNF+RVSFVDEEWDKMRS DLL
Sbjct: 361  DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLL 420

Query: 421  PRMSSTIEDGKTDIYKRILSVLRNGIVIGDKNFEFLAFSSSQLRDNSMWMFASRPGLDAA 480
            PRM+S+IE+GKTDIY+RILSVL+NGI IGDK F+FLAFSSSQLR+NS+WMFASRPGLDAA
Sbjct: 421  PRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAA 480

Query: 481  AIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQQGEVKYVFSDG 540
             IREWMGDF+HIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQ GEVKYVFSDG
Sbjct: 481  VIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDG 540

Query: 541  IGKISSGFAKRVAAKCGLQAFTPSAFQIRYGGYKGVVAVDPNSSIKLSLRKSMCKFESEN 600
            IGKISS FAKRVA+KC L AFTPSAFQIRYGGYKGVVAVDP SS+KLSLRKSMCKFES+N
Sbjct: 541  IGKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDN 600

Query: 601  TKLDVLAFSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLMAQEALE 660
            TKLDVL +SKYQPCFLNRQLITLLSTLGV+DEVFEKKQ EA+EQLDAILTDPL AQEALE
Sbjct: 601  TKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALE 660

Query: 661  LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRGMMGCL 720
            LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFR SKLLELRTKSRIFIPNGR MMGCL
Sbjct: 661  LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCL 720

Query: 721  DETRTLEYGQVFVQISSARHRNLSETYAFNMSGSEHHLVIEGNVTVAKNPCLHPGDVRVL 780
            DET TLEYGQVFVQIS+ARHR++S+T AF+MSGSE HLVI GNVTVAKNPCLHPGDVRVL
Sbjct: 721  DETGTLEYGQVFVQISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVL 780

Query: 781  KAVNIPWLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDNELIPPRQITPMDYTP 840
             AVN+P LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWD ELIPPRQI PMDYTP
Sbjct: 781  NAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTP 840

Query: 841  APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKLFSI 900
            APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARS+PC+ELAKLFSI
Sbjct: 841  APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSI 900

Query: 901  AVDFPKTGVAAIIPPHLSVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPNVSYISSF 960
            AVDFPKTGV AIIP HL+VKEFPDFMEKPDR SYESKNVIGKLFRAVK IAPN+SYI SF
Sbjct: 901  AVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYIRSF 960

Query: 961  TQDVAMRCYDSDMEAEGFEDYIADAFYYKTTYDNKLGNLLDYYGIKSEAEILSGSIMRMS 1020
            T+DVAMRCYDSDMEAEGFEDY+ DA Y+KT YD KLGNLLDYYGIKSE+EI SG+IMRMS
Sbjct: 961  TRDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMS 1020

Query: 1021 KSFTRRRDAEAITLAVRSLRKEARTWFNAKEGDPDSGSDDLFAKASAWYHVTYHHSYWGS 1080
            KSFTRRRDAEAI LA RSLRKEARTWFN KE   DSGSDDLFAKASAWYHVTYHHSYWGS
Sbjct: 1021 KSFTRRRDAEAINLAARSLRKEARTWFNTKESGLDSGSDDLFAKASAWYHVTYHHSYWGS 1080

Query: 1081 YNEGMERAHYLSFPWCVYDKLMQVKDSNLRRRERASRLAILDRFGHVLNLGGR 1134
            YN+GM+R HYLSFPWCVY KLMQVK++NLR+RERASRLA LDRF  VLNL GR
Sbjct: 1081 YNDGMKRDHYLSFPWCVYHKLMQVKENNLRKRERASRLATLDRFSRVLNLDGR 1131

[Close]
BLAST of Sed0015641 vs. ExPASy TrEMBL
Match: A0A6J1K2N6 (RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111490498 PE=3 SV=1)

HSP 1 Score: 2047.3 bits (5303), Expect = 0.0e+00
Identity = 999/1133 (88.17%), Postives = 1059/1133 (93.47%), Query Frame = 0 

Query: 1    MGKTVHISGFPSHVTAGAVKSFLEGRTGVGTVYAIKVRPPKGGGGGRVYAIVQFTGVAHA 60
            MGKTVHISGFPSH TA +VKSFLE RTG+GTVYAIKVRPPK  GG RVYAIVQFTG A A
Sbjct: 15   MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPK-RGGSRVYAIVQFTGAAQA 74

Query: 61   ELIISLANQRLWYGSSYLKARAADTDIVPKPRTYIHTLENLTVCFGCQVSSEKFHVLWEG 120
            ELIISLANQRLWYGSSYLKARAAD DIVPKPRTY+HTLENLT+CFGCQVSSEKFHVLWEG
Sbjct: 75   ELIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVLWEG 134

Query: 121  GVDLVTFGTGMRKMNFRLIHNFVEYRFELSYENIWQIQLHQPQLQFTKYLLIQLYGAPRI 180
             V+LVTFG  MRKMNF LIHNFVEYRF+LSYENIWQIQLH+ Q Q  K LLIQLYGAPRI
Sbjct: 135  DVELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRI 194

Query: 181  YKKVAPSSGQIFDDPLMNFFKEVPDDQWIRTADFTPSCSIGQASSLCLKLPNGRQLPNFR 240
            YKKVAPSSGQIFDDPL NFFKEVPDDQ +RTADFTPS SIGQ+SSLCLKLPNGRQLPNFR
Sbjct: 195  YKKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLPNFR 254

Query: 241  QNFAYYEEFENDFELVDGGNGFSCSEDLVPMVDSRPKVRLPFEIIFKVNVLVQNGCIPGP 300
            ++FAYYEEFE++F+LVDGGNGFSCS+DLVP+VDS P V LP+EIIFKVNVLVQNGCIPGP
Sbjct: 255  RHFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVLLPYEIIFKVNVLVQNGCIPGP 314

Query: 301  SLDTGFYRLVDPSRIKTEFVEHALEKLFHLKECSYEPSSFLREQYRKYLRHPPNSPAISL 360
            SLDTGFYRLVDPSRI+ E+VE+ALEKLFHLKEC YEPSSFL EQY+KY +HP NSPAI+L
Sbjct: 315  SLDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIAL 374

Query: 361  DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDLDNFIRVSFVDEEWDKMRSIDLL 420
            DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHF +DLDNF+RVSFVDEEWDKMRS DLL
Sbjct: 375  DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLL 434

Query: 421  PRMSSTIEDGKTDIYKRILSVLRNGIVIGDKNFEFLAFSSSQLRDNSMWMFASRPGLDAA 480
            PRM+S+IE+GKTDIY+RILSVL+NGI IGDK F+FLAFSSSQLR+NS+WMFASRPGLDAA
Sbjct: 435  PRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAA 494

Query: 481  AIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQQGEVKYVFSDG 540
             IREWMGDF+HIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQ GEVKYVFSDG
Sbjct: 495  VIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDG 554

Query: 541  IGKISSGFAKRVAAKCGLQAFTPSAFQIRYGGYKGVVAVDPNSSIKLSLRKSMCKFESEN 600
            IGKISS FAKRVA+KC L AFTPSAFQIRYGGYKGVVAVDP SS+KLSLRKSMCKFES+N
Sbjct: 555  IGKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDN 614

Query: 601  TKLDVLAFSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLMAQEALE 660
            TKLDVL +SKYQPCFLNRQLITLLSTLGV+DEVFEKKQ EA+EQLDAILTDPL AQEALE
Sbjct: 615  TKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALE 674

Query: 661  LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRGMMGCL 720
            LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFR SKLLELRTKSRIFIPNGR MMGCL
Sbjct: 675  LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCL 734

Query: 721  DETRTLEYGQVFVQISSARHRNLSETYAFNMSGSEHHLVIEGNVTVAKNPCLHPGDVRVL 780
            DET TLEYGQVFVQIS+ARHR++S+T AF+MSGSE HLVI GNVTVAKNPCLHPGDVRVL
Sbjct: 735  DETGTLEYGQVFVQISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVL 794

Query: 781  KAVNIPWLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDNELIPPRQITPMDYTP 840
             AVN+P LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWD ELIPPRQI PMDYTP
Sbjct: 795  NAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTP 854

Query: 841  APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKLFSI 900
            APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARS+PC+ELAKLFSI
Sbjct: 855  APPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSI 914

Query: 901  AVDFPKTGVAAIIPPHLSVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPNVSYISSF 960
            AVDFPKTGV AIIP HL+VKEFPDFMEKPDR SYESKNVIGKLFRAVK IAPN+SYI SF
Sbjct: 915  AVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYIRSF 974

Query: 961  TQDVAMRCYDSDMEAEGFEDYIADAFYYKTTYDNKLGNLLDYYGIKSEAEILSGSIMRMS 1020
            T+DVAMRCYDSDMEAEGFEDY+ DA Y+KT YD KLGNLLDYYGIKSE+EI SG+IMRMS
Sbjct: 975  TRDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMS 1034

Query: 1021 KSFTRRRDAEAITLAVRSLRKEARTWFNAKEGDPDSGSDDLFAKASAWYHVTYHHSYWGS 1080
            KSFTRRRDAEAI LA RSLRKEARTWFN KE   DSGSDDLFAKASAWYHVTYHHSYWGS
Sbjct: 1035 KSFTRRRDAEAINLAARSLRKEARTWFNTKESGLDSGSDDLFAKASAWYHVTYHHSYWGS 1094

Query: 1081 YNEGMERAHYLSFPWCVYDKLMQVKDSNLRRRERASRLAILDRFGHVLNLGGR 1134
            YN+GM+R HYLSFPWCVY KLMQVK++NLR+RERASRLA LDRF  VLNL GR
Sbjct: 1095 YNDGMKRDHYLSFPWCVYHKLMQVKENNLRKRERASRLATLDRFSRVLNLDGR 1145

[Close]
BLAST of Sed0015641 vs. ExPASy TrEMBL
Match: A0A1S3CPY1 (RNA-dependent RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103502906 PE=3 SV=1)

HSP 1 Score: 1946.4 bits (5041), Expect = 0.0e+00
Identity = 955/1134 (84.22%), Postives = 1021/1134 (90.04%), Query Frame = 0 

Query: 1    MGKTVHISGFPSHVTAGAVKSFLEGRTGVGTVYAIKVRPPKGGGGGRVYAIVQFTGVAHA 60
            MGKT+HISGFPSHVTA AVK+FLEG TG GTVYAIKVRPPK  GGGR+YAIVQFT    A
Sbjct: 1    MGKTIHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPK-RGGGRLYAIVQFTSATQA 60

Query: 61   ELIISLANQRLWYGSSYLKARAADTDIVPKPRTYIHTLENLTVCFGCQVSSEKFHVLWEG 120
            ELI+SLANQRLWYGSSYLKAR+ + DIVPKP+TY++ L++L +CFGCQVSSEKF VLWEG
Sbjct: 61   ELIVSLANQRLWYGSSYLKARSTEVDIVPKPKTYMYMLKDLLLCFGCQVSSEKFRVLWEG 120

Query: 121  GVDLVTFGTGMRKMNFRLIHNFVEYRFELSYENIWQIQLHQPQLQFTKYLLIQLYGAPRI 180
             VDLVTFG GMRKMNF L +N VEYR ELSYENIWQIQLH PQ Q  KYLLIQLYGAPRI
Sbjct: 121  NVDLVTFGIGMRKMNFHLKYNSVEYRLELSYENIWQIQLHSPQCQSMKYLLIQLYGAPRI 180

Query: 181  YKKVAPSSGQIFDDPLMNFFKEVPDDQWIRTADFTPSCSIGQASSLCLKLPNGRQLPNFR 240
            YKKVAPSSGQIFD+P++NFF EVPDDQW+RT DFT SCSIGQ+SSLCLKLPNG +LP F+
Sbjct: 181  YKKVAPSSGQIFDNPILNFFMEVPDDQWVRTTDFTSSCSIGQSSSLCLKLPNGLELPTFK 240

Query: 241  QNFAYYEEFENDFELVDGGNGFSCSEDLVPMVDSRPKVRLPFEIIFKVNVLVQNGCIPGP 300
            QNFAYYEEFE++F L+D    FS   DL P+VDSRP V LP+EIIFK+N LVQ+GCIP  
Sbjct: 241  QNFAYYEEFEHEFRLIDEDASFSFCRDLAPIVDSRPHV-LPYEIIFKINALVQHGCIPWS 300

Query: 301  SLDTGFYRLVDP-SRIKTEFVEHALEKLFHLKECSYEPSSFLREQYRKYLRHPPNSPAIS 360
             LDT FYRLV+    I+ EFVEHALEKLFHLKEC+Y+PS+FL EQ+R+Y RHPPNSP IS
Sbjct: 301  LLDTSFYRLVERIITIRIEFVEHALEKLFHLKECNYDPSNFLTEQFRRYSRHPPNSPVIS 360

Query: 361  LDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDLDNFIRVSFVDEEWDKMRSIDL 420
            LD GLVYVRRVQITPCKVYFCGPEVNVSNRVLRHF + +DNF+RVSFVDEEWDKMRS DL
Sbjct: 361  LDDGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSKYIDNFLRVSFVDEEWDKMRSTDL 420

Query: 421  LPRMSSTIEDGKTDIYKRILSVLRNGIVIGDKNFEFLAFSSSQLRDNSMWMFASRPGLDA 480
            LPRMSS  ED KTDIY+RILSVL+NGIVIGDK F+FLAFSSSQLRDNS+WMFAS P +DA
Sbjct: 421  LPRMSSKSEDSKTDIYRRILSVLKNGIVIGDKTFQFLAFSSSQLRDNSLWMFASGPDIDA 480

Query: 481  AAIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQQGEVKYVFSD 540
            A IR WMGDFRHIKNPAKYAARLGQSFGSSTE LSVA +EREIIPDIEVQ GEVKYVFSD
Sbjct: 481  AYIRAWMGDFRHIKNPAKYAARLGQSFGSSTEALSVASNEREIIPDIEVQHGEVKYVFSD 540

Query: 541  GIGKISSGFAKRVAAKCGLQAFTPSAFQIRYGGYKGVVAVDPNSSIKLSLRKSMCKFESE 600
            GIGKISS FAK VA KCG QA  PSAFQIRYGGYKGVVAVDP S+IKLSLRKSMCKFES+
Sbjct: 541  GIGKISSKFAKEVATKCGFQA-VPSAFQIRYGGYKGVVAVDPYSTIKLSLRKSMCKFESD 600

Query: 601  NTKLDVLAFSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLMAQEAL 660
            N KLDVL  SKYQPCFLNRQLITLLSTLGVRDE+FEKKQ EAVEQLDAILTDPL AQEAL
Sbjct: 601  NIKLDVLGHSKYQPCFLNRQLITLLSTLGVRDEIFEKKQSEAVEQLDAILTDPLKAQEAL 660

Query: 661  ELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRGMMGC 720
            ELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGR MMGC
Sbjct: 661  ELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGC 720

Query: 721  LDETRTLEYGQVFVQISSARHRNLSETYAFNMSGSEHHLVIEGNVTVAKNPCLHPGDVRV 780
            LDET TLEYGQVFVQIS  RHRNLSE++AFN SG EH LVIEG VTVAKNPCLHPGDVRV
Sbjct: 721  LDETMTLEYGQVFVQISGGRHRNLSESFAFN-SGQEHCLVIEGKVTVAKNPCLHPGDVRV 780

Query: 781  LKAVNIPWLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDNELIPPRQITPMDYT 840
            LKAVN+P LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWD ELIPPRQITPMDYT
Sbjct: 781  LKAVNVPGLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQITPMDYT 840

Query: 841  PAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKLFS 900
            PA PI+LDRDVT ED+QEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAK FS
Sbjct: 841  PALPIELDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKQFS 900

Query: 901  IAVDFPKTGVAAIIPPHLSVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPNVSYISS 960
            IAVDFPKTGV AIIP HL VKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAP +S+I  
Sbjct: 901  IAVDFPKTGVPAIIPSHLYVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPTLSHIQP 960

Query: 961  FTQDVAMRCYDSDMEAEGFEDYIADAFYYKTTYDNKLGNLLDYYGIKSEAEILSGSIMRM 1020
            FT+DVA RCYD DME EGFEDY  DAFY+K+ YD+KLGNLLDYYGIKSEAEILSGSIMRM
Sbjct: 961  FTRDVARRCYDCDMEVEGFEDYFEDAFYHKSNYDDKLGNLLDYYGIKSEAEILSGSIMRM 1020

Query: 1021 SKSFTRRRDAEAITLAVRSLRKEARTWFNAKEGDPDSGSDDLFAKASAWYHVTYHHSYWG 1080
            SKSFTRRRDAEAI LAVRSLRKEARTWFNA+EG  DS SDDLFAKASAWY+VTYHHSYWG
Sbjct: 1021 SKSFTRRRDAEAINLAVRSLRKEARTWFNAREG-ADSNSDDLFAKASAWYYVTYHHSYWG 1080

Query: 1081 SYNEGMERAHYLSFPWCVYDKLMQVKDSNLRRRERASRLAILDRFGHVLNLGGR 1134
             YNEGM+R HYLSFPWC+YDKLMQ+K++NLR+RERA+RLA  DRFGHVLNLGGR
Sbjct: 1081 CYNEGMKRDHYLSFPWCIYDKLMQIKENNLRKRERAARLATFDRFGHVLNLGGR 1129

[Close]
BLAST of Sed0015641 vs. TAIR 10
Match: AT1G14790.1 (RNA-dependent RNA polymerase 1 )

HSP 1 Score: 1444.9 bits (3739), Expect = 0.0e+00
Identity = 729/1134 (64.29%), Postives = 863/1134 (76.10%), Query Frame = 0 

Query: 1    MGKTVHISGFPSHVTAGAVKSFLEGRTGVGTVYAIKVRPPKGGGGGRVYAIVQFTGVAHA 60
            MGKT+ + GFP+ V+A  VK FLE  TG GTVYAIKVR PK  GG RVYAIVQFT   H 
Sbjct: 1    MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPK-KGGPRVYAIVQFTSERHT 60

Query: 61   ELIISLANQRLWYGSSYLKARAADTDIVPKPRTYIHTLENLTVCFGCQVSSEKFHVLWEG 120
             LII+ A +RL+YG SYLKA   + DIVPKPR  +HT+  L + FGCQVS++KF  LW  
Sbjct: 61   RLIITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSA 120

Query: 121  GVDLVTFGTGMRKMNFRLIHNFVEYRFELSYENIWQIQLHQPQLQFTKYLLIQLYGAPRI 180
                V+FG GMRK++F       +YR ELSYENIWQI LH PQ + +K+L+IQ+ GAP+I
Sbjct: 121  QDVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKI 180

Query: 181  YKKVAPSSGQIFDDPLMNFFKEVPDDQWIRTADFTPSCSIGQASSLCLKLPNGRQLPNFR 240
            ++K       +F   +M+F+ +  D+QWIRT DFT S  IGQ+++ CL+LP    +P+FR
Sbjct: 181  FEKEDQPINLLFG--IMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFR 240

Query: 241  QNFAYYEEFENDFELVDGGNGFSCSED-LVPMVDSRPKVRLPFEIIFKVNVLVQNGCIPG 300
            +NFA Y E      L++ G+ +S + + LVP+VD  P   LPFEI+FK+N LVQN C+ G
Sbjct: 241  ENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNACLSG 300

Query: 301  PSLDTGFYRLVDPSRIKTEFVEHALEKLFHLKECSYEPSSFLREQYRKYLRHP--PNSPA 360
            P+LD  FYRL++  +     ++H LEKLFHL EC YEP+ +LR++Y+K++     P SP 
Sbjct: 301  PALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSPT 360

Query: 361  ISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDLDNFIRVSFVDEEWDKMRSI 420
            ISLD GLVY+ RVQ+TP +VYF GPEVNVSNRVLRH+ + ++NF+RVSFVDE+ +K+RS+
Sbjct: 361  ISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSM 420

Query: 421  DLLPRMSSTIEDGKTDIYKRILSVLRNGIVIGDKNFEFLAFSSSQLRDNSMWMFASRPGL 480
            DL PR S+     +T +Y RI SVLR+GIVIGDK FEFLAFSSSQLR+NS WMFA    +
Sbjct: 421  DLSPRSST---QRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRI 480

Query: 481  DAAAIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQQGEVKYVF 540
             AA IR WMGDF HI+N AKYAARLGQSF SS ETL+V   E E+IPD+E+     +YVF
Sbjct: 481  TAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVF 540

Query: 541  SDGIGKISSGFAKRVAAKCGLQAFTPSAFQIRYGGYKGVVAVDPNSSIKLSLRKSMCKFE 600
            SDGIGKIS+ FA++VA KCGL  F+PSAFQIRYGGYKGVVAVDPNSS KLSLRKSM KFE
Sbjct: 541  SDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKFE 600

Query: 601  SENTKLDVLAFSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLMAQE 660
            SENTKLDVLA+SKYQPC++NRQLITLLSTLGV D VFEKKQRE V++LDAILT PL A E
Sbjct: 601  SENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHE 660

Query: 661  ALELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRGMM 720
            AL LM+PGENTNILK ++ CGYKPD EP+LSMMLQ FRASKLLELRTK+RIFI  GR MM
Sbjct: 661  ALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMM 720

Query: 721  GCLDETRTLEYGQVFVQISSARHRNLSETYAFNMSGSEHHLVIEGNVTVAKNPCLHPGDV 780
            GCLDETRTLEYGQV VQ S                      +I G V VAKNPCLHPGDV
Sbjct: 721  GCLDETRTLEYGQVVVQYSDPMRPG-------------RRFIITGPVVVAKNPCLHPGDV 780

Query: 781  RVLKAVNIPWLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDNELIPPRQITPMD 840
            RVL+AVN+P L HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD EL+PPR   PMD
Sbjct: 781  RVLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPMD 840

Query: 841  YTPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKL 900
            YTP P   LD DVTIE+V+EYF NY+VNDSLGIIANAHTAFADKEP KA S PC+ELAK 
Sbjct: 841  YTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKK 900

Query: 901  FSIAVDFPKTGVAAIIPPHLSVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPNVSYI 960
            FS AVDFPKTGVAA+IP HL VKE+PDFMEKPD+P+YESKNVIGKLFR VK+ AP +  I
Sbjct: 901  FSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISI 960

Query: 961  SSFTQDVAMRCYDSDMEAEGFEDYIADAFYYKTTYDNKLGNLLDYYGIKSEAEILSGSIM 1020
             SFT DVA + YD DME +GFE+Y+ +AFY K  YD KLGNL+DYYGIK+EAEILSG IM
Sbjct: 961  KSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIM 1020

Query: 1021 RMSKSFTRRRDAEAITLAVRSLRKEARTWFNAKEGDPDSGSDDLFAKASAWYHVTYHHSY 1080
            RMSKSFT+RRDAE+I  AVR+LRKE  + FNA E + +       AKASAWYHVTYH SY
Sbjct: 1021 RMSKSFTKRRDAESIGRAVRALRKETLSLFNASEEEENES-----AKASAWYHVTYHSSY 1080

Query: 1081 WGSYNEGMERAHYLSFPWCVYDKLMQVKDSNLRRRERASRLAILDRFGHVLNLG 1132
            WG YNEG+ R H+LSF WCVYDKL+++K +NL RR+R      L+R  HVL  G
Sbjct: 1081 WGLYNEGLNRDHFLSFAWCVYDKLVRIKKTNLGRRQRQE---TLERLDHVLRFG 1107

[Close]
BLAST of Sed0015641 vs. TAIR 10
Match: AT4G11130.1 (RNA-dependent RNA polymerase 2 )

HSP 1 Score: 761.5 bits (1965), Expect = 9.4e-220
Identity = 450/1136 (39.61%), Postives = 663/1136 (58.36%), Query Frame = 0 

Query: 4    TVHISGFPSHVTAGAVKSFLEGRTGVGTVYAIKVRPPKGGGGGRVYAIVQFTGV---AHA 63
            TV IS  P  + A  +  FLE   G  TV+A+++   +     R +A VQFT +   + A
Sbjct: 11   TVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTTLEVKSRA 70

Query: 64   ELIISLANQRLWYGSSYLKARAADTDIVPKPRTYIHTLENLTVCFGCQVSSEK-FHVL-- 123
            +L+ S    +L + +  L+   A  DI+P+P      L+++ +  G   S EK F  L  
Sbjct: 71   QLLSS--QSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEK 130

Query: 124  WEGGVDLVTFGTGMRKMNFRLIHNFVEYRFELSYENIWQIQ---LHQPQLQFTKYLLIQL 183
            W+G    +   T  R++ F +  +   Y+ E+ +E+I +     ++    +   +LL   
Sbjct: 131  WDGVRCWIL--TEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKLK 190

Query: 184  YGAPRIYKKVAPSSGQIFDDPLMNFFKEVPDDQWIRTADFTPSCSIGQASSLCLKLPNGR 243
            YG P+++K+V       F      F KE  D  WIRT DF+ S SIG ++  CL++ NG 
Sbjct: 191  YG-PKVFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGS 250

Query: 244  QLPNFRQNFAYYEEFENDFELVDGGNGFSCSEDLVPMVDSR-PKVRLPFEIIFKVNVLVQ 303
             + +      YY E       VD G  F+ +  +VP++++    +  P+EI+F++N LV 
Sbjct: 251  TMLDIFSGLPYYREDTLSLTYVD-GKTFASAAQIVPLLNAAILGLEFPYEILFQLNALVH 310

Query: 304  NGCIP-GPSLDTGFYRLVDPSRIKTEFVEHALEKLFHLKECSYEPSSFLREQYRKYLRHP 363
               I    + D    +++    ++T  V   L+KL       Y+P  F++ Q +  ++  
Sbjct: 311  AQKISLFAASDMELIKILRGMSLETALV--ILKKLHQQSSICYDPVFFVKTQMQSVVKKM 370

Query: 364  PNSPAIS----LDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDLDNFIRVSFVD 423
             +SPA +     +  ++  +R  +TP K+Y  GPE+  +N V+++F + + +F+RV+FV+
Sbjct: 371  KHSPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVE 430

Query: 424  EEWDKM--RSIDLLPRMSSTIEDGKTDIYKRILSVLRNGIVIGDKNFEFLAFSSSQLRDN 483
            E+W K+   ++ +  +    ++  +T+IY R+LS+L  GI +G K FEFLAFS+SQLR N
Sbjct: 431  EDWSKLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGN 490

Query: 484  SMWMFASRPGLDAAAIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDI 543
            S+WMFAS   + A  IREWMG FR I++ +K AAR+GQ F +S +TL V   + E IPDI
Sbjct: 491  SVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIPDI 550

Query: 544  EVQQGEVKYVFSDGIGKISSGFAKRVAAKCGLQAFTPSAFQIRYGGYKGVVAVDPNSSIK 603
            EV      Y FSDGIGKIS  FAK+VA KCGL +  PSAFQIRYGGYKGV+AVD +S  K
Sbjct: 551  EVTTDGADYCFSDGIGKISLAFAKQVAQKCGL-SHVPSAFQIRYGGYKGVIAVDRSSFRK 610

Query: 604  LSLRKSMCKFESENTKLDVLAFSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLD 663
            LSLR SM KF+S N  L+V  +++  PCFLNR++I LLSTLG+ D +FE  Q   +  L 
Sbjct: 611  LSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLG 670

Query: 664  AILTDPLMAQEALELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKS 723
             +L D   A   L+ +S   + N+L +ML  GY P  EPYLSMML+    S+L EL+++ 
Sbjct: 671  NMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRC 730

Query: 724  RIFIPNGRGMMGCLDETRTLEYGQVFVQISSARHRNLSETYAFNMSGSEHHLVIEGNVTV 783
            RI +P GR ++GC+DE   LEYGQV+V+++  +    S   ++     E   V+ G V V
Sbjct: 731  RILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVIGKVVV 790

Query: 784  AKNPCLHPGDVRVLKAVNIPWLYHM-----VDCVVFPQKGSRPHPNECSGSDLDGDIYFV 843
             KNPCLHPGD+RVL A+   +  H      +DC++FPQKG RPHPNECSG DLDGD +FV
Sbjct: 791  TKNPCLHPGDIRVLDAI---YEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFV 850

Query: 844  CWDNELIPPRQITPMDYTPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADK 903
             WD ++IP     PMDY  + P  +D DVT+E++ ++FV+YM++D+LG+I+ AH   AD+
Sbjct: 851  SWDEKIIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADR 910

Query: 904  EPFKARSSPCVELAKLFSIAVDFPKTGVAAIIPPHLSVKEFPDFMEKPDRPSYESKNVIG 963
            +P KARS  C+ELA L S AVDF KTG  A +P  L  +EFPDF+E+ ++P+Y S++V G
Sbjct: 911  DPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFG 970

Query: 964  KLFRAVKDIAPNVSYISSFTQDVAMRCYDSDMEAEGFEDYIADAFYYKTTYDNKLGNLLD 1023
            KL+RAVK         +     VA   YD  +E  GFE +I  A  ++  Y  KL +L+ 
Sbjct: 971  KLYRAVKSSLAQRKPEAESEDTVA---YDVTLEEAGFESFIETAKAHRDMYGEKLTSLMI 1030

Query: 1024 YYGIKSEAEILSGSI----MRMSKSFTRRRD-AEAITLAVRSLRKEARTWFNAKEGDPDS 1083
            YYG  +E EIL+G +    M +++   R  D  + ITL+V+ L KEA  WF  K  + + 
Sbjct: 1031 YYGAANEEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFE-KSCEDEQ 1090

Query: 1084 GSDDLFAKASAWYHVTYHHSYWGSYNEGMERAHYLSFPWCVYDKLMQVKDSNLRRR 1113
                L   ASAWY+VTY+       N   E+  +LSFPW V D L+ +K  N +R+
Sbjct: 1091 QKKKL---ASAWYYVTYNP------NHRDEKLTFLSFPWIVGDVLLDIKAENAQRQ 1121

[Close]
BLAST of Sed0015641 vs. TAIR 10
Match: AT3G49500.1 (RNA-dependent RNA polymerase 6 )

HSP 1 Score: 588.2 bits (1515), Expect = 1.4e-167
Identity = 399/1083 (36.84%), Postives = 579/1083 (53.46%), Query Frame = 0 

Query: 93   TYIHTLENLTVCFGCQVSSEKFHVLWEG-GVD-LVTFGTGMRKMNFR----------LIH 152
            T  + L  +T+  G  VS + F V W   GVD LV       K  FR          ++H
Sbjct: 127  TVPYKLAGITLEIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMH 186

Query: 153  NFV--EYRFELSYENIWQIQLHQPQLQFTKYLLIQLYGAPRIYKKVAPSS------GQIF 212
              +  +Y+ EL   +I  ++ ++    F   L++QL  +PR++ + A         G + 
Sbjct: 187  AVINCDYKLELLVRDIQTVRQYKTLHGFV--LILQLASSPRVWYRTADDDIYDTVPGDLL 246

Query: 213  DDPLMNFFKEVPDDQWIRTADFTPSCSIGQASSLCLKLPNGRQLPNFRQNFAYYEEFEND 272
            DD          DD WIRT DFT   +IG+  S  + L + R     R    Y+      
Sbjct: 247  DD----------DDPWIRTTDFTQVGAIGRCHSYRV-LISPRYENKLRTALDYFRMRRVQ 306

Query: 273  FELVDGG---NGFSCSEDLVPMVDS----RPKVRLPFEIIFKVNVLVQNGCIPGPSLDTG 332
             E V          C  +  P+ D       K  + FEI+F VN ++  G      L   
Sbjct: 307  EERVRWPPRIRNEPCFGE--PVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTER 366

Query: 333  FYRLVDPSRIKTEFVEHALEKLFHLKECSYEPSSFLREQYRKYL-----RHPPNSPAISL 392
            F+ L     ++ +  +  +  L HL  C+Y+   F   +  K +     ++P    +   
Sbjct: 367  FFDL-----LRNQPKDVNIASLKHL--CTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQ 426

Query: 393  DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDLDNFIRVSFVDEEWDKMRS---- 452
               +  +RR+ ITP + Y   PEV +SNRVLR +    + F+RV+F+DE    + S    
Sbjct: 427  SEDISEIRRLVITPTRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLS 486

Query: 453  ---IDLLPRMSSTIEDGKTDIYKRILSVLRNGIVIGDKNFEFLAFSSSQLRDNSMWMFAS 512
                 ++  ++S+    KT ++KR+ S+L +G  +  + + FLAFS++QLRD S W FA 
Sbjct: 487  YFVAPIVKDLTSSSFSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAE 546

Query: 513  RPGLDAAAIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREI-IPDIEVQQGE 572
                  + I+ WMG F+  KN AK AAR+G  F S+  T+ V  HE +  +PDIE + G 
Sbjct: 547  DGKTRVSDIKTWMGKFKD-KNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIE-RNG- 606

Query: 573  VKYVFSDGIGKISSGFAKRVAAKCGLQA-FTPSAFQIRYGGYKGVVAVDPNSS--IKLSL 632
              YVFSDGIG I+   A  V  K  L   ++P A+QIRY G+KGVVA  P+ S  I+L+L
Sbjct: 607  --YVFSDGIGTITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLAL 666

Query: 633  RKSMCKFESENTKLDVLAFSKYQPCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAIL 692
            R SM KF S++T L++ +++++QP FLNRQ+ITLLS LGV DE+F   Q   + +L+ IL
Sbjct: 667  RDSMKKFFSKHTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRIL 726

Query: 693  TDPLMAQEALELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIF 752
             D  +A E L   S  E  N    ML  G+KP  EP+L  ML + R ++L  LR KSRIF
Sbjct: 727  DDTDVAFEVL-TASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIF 786

Query: 753  IPNGRGMMGCLDETRTLEYGQVFVQISSARHRNLSETYAFNMSGSEHHL-VIEGNVTVAK 812
            + +GR +MGCLDE   LE+GQ F+Q+S     N    +      ++  L V++G V +AK
Sbjct: 787  VTSGRWLMGCLDEAGILEHGQCFIQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAK 846

Query: 813  NPCLHPGDVRVLKAVNIPWLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDNELI 872
            NPCLHPGDVR+L+AV++P L+HM DC++FPQKG RPH NE SGSDLDGD+YFV WD +LI
Sbjct: 847  NPCLHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLI 906

Query: 873  PP--RQITPMDYTPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKA 932
            PP  +    M Y  A    L R V  +D+ ++F   + N+ LG I NAH   AD+  + A
Sbjct: 907  PPNRKSYPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGA 966

Query: 933  RSSPCVELAKLFSIAVDFPKTGVAAIIPPHLSVKEFPDFMEKPDRPSYESKNVIGKLFRA 992
                C+ LA+L + AVDFPKTG    +P HL  K +PDFM K D  +Y+S  ++G+L+R 
Sbjct: 967  MDEECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRR 1026

Query: 993  VKDIAPNVSYISS-FTQDVAMRCYDSDMEAEGFEDYIADAFYYKTTYDNKLGNLLDYYGI 1052
            VK++    +  SS  + D +   YD+ +E  GFED I +A+ +K  YD +L  LL  Y +
Sbjct: 1027 VKEVYDEDAEASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKV 1086

Query: 1053 KSEAEILSGSIMRMSKSFTRRRD--AEAITLAVRSLRKEARTWFNAKEGDPDSGSDD--- 1112
            + E EI++G I  M K  ++++    E +  +  SL+KE R  F     D ++ S++   
Sbjct: 1087 QKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKN 1146

Query: 1113 --LFAKASAWYHVTYHHSYWGSYNEGME-----RAHYLSFPWCVYDKLMQVKDSNLRRRE 1117
                 KASAWYHVTYH  +     E  +      A  LSF W   D L ++K   +R RE
Sbjct: 1147 ILYEKKASAWYHVTYHPEWVKKSLELQDPDESSHAAMLSFAWIAADYLARIK---IRSRE 1178

[Close]
BLAST of Sed0015641 vs. TAIR 10
Match: AT2G19910.1 (RNA-dependent RNA polymerase family protein )

HSP 1 Score: 114.4 bits (285), Expect = 6.0e-25
Identity = 111/431 (25.75%), Postives = 181/431 (42.00%), Query Frame = 0 

Query: 556 CGLQAFTPSAFQIRYGGY--KGVVAVDPNSSIK-LSLRKSMCKFESENTKLDVLAFSKYQ 615
           CG +      F+I Y GY  KG    +     + + +R SM K   + T  ++  F+  +
Sbjct: 445 CGQEPPLLIQFRIFYNGYAVKGTFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLE 504

Query: 616 ---------PCFLNRQLITLLSTLGVRDEVFEKKQREAVEQLDAILTDPLMAQEALELMS 675
                       L+R L+ LLS  GV ++ F    R  +E+   I      A +A     
Sbjct: 505 VVTTSNPPRKARLSRNLVALLSYGGVPNDFFLNILRNTLEESKTIFYSERAAFKAAINYG 564

Query: 676 PGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRGMMGCLDET 735
             + T    +M+  G   D EPYL   L     ++   L+   R  I     +MG +D T
Sbjct: 565 DDQYT---ADMILVGIPLD-EPYLKDRLSYLLKTERNALKA-GRFPIDESYYIMGTVDPT 624

Query: 736 RTLEYGQVFVQISSARHRNLSETYAFNMSGSEHHLVIEGNVTVAKNPCLHPGDVRVLKAV 795
             L+  ++ V + S +                    I G+V V +NP LH GD+ VLKA 
Sbjct: 625 GELKENEICVILHSGQ--------------------ISGDVLVYRNPGLHFGDIHVLKAT 684

Query: 796 NIPWLYHMVD----CVVFPQKGSRPHPNECSGSDLDGDIYFVCWDNELIPPRQITPMD-- 855
            +  L   V      V FPQKG R   +E +G D DGD+YF+  + +L+      P +  
Sbjct: 685 YVKALEDYVGNAKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLL--EHFKPSEPW 744

Query: 856 ---------YTPAPPIQLDRDVTIEDVQEYFV--NYMVNDSLGIIANAHTAFAD------ 915
                    Y    P +L  +   E++ + F+   +   D +G+ A+      D      
Sbjct: 745 VSSSKPSKIYCGRKPSELSEEELEEELFKMFLKARFCKRDVIGMAADCWLGIMDPFLTLG 804

Query: 916 ----KEPFKARSSPCVELAKLFSIAVDFPKTGVAAIIPPHLSVKEFPDFMEKPDRPSYES 948
               KE ++ R    ++L  ++  A+D PK G    +PP L +K FP +ME+  +  + S
Sbjct: 805 DESAKEKYE-RKKNILKLIDIYYDALDAPKKGAKVDLPPDLEIKNFPHYMERDPKRDFRS 847

[Close]
BLAST of Sed0015641 vs. TAIR 10
Match: AT2G19930.1 (RNA-dependent RNA polymerase family protein )

HSP 1 Score: 106.3 bits (264), Expect = 1.6e-22
Identity = 121/468 (25.85%), Postives = 199/468 (42.52%), Query Frame = 0 

Query: 536 VFSDGIGKISSGFAKR-----VAAKCGLQAFTPSA----------FQIRYGGY--KG--- 595
           + SDG G IS   A+         KC        A          F++ Y GY  KG   
Sbjct: 397 IHSDGTGYISEDLARMCPLNIFKGKCLRSESIQEACYQDPPLLIQFRMFYDGYAVKGTFL 456

Query: 596 --------VVAVDPNSSIKLSLRKSMCKFESENTKLDVLAFSKYQPCFLNRQLITLLSTL 655
                    V V P S IK+S   S+  F + N    V   +  +   L++ L+ LLS  
Sbjct: 457 LNKKLCPRTVQVRP-SMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTKLSKNLVALLSYG 516

Query: 656 GVRDEVFEKKQREAVEQLDAILTDPLMAQEALELMSPGENTNILKEMLKCGY---KPDVE 715
           G+ +E F       +E+  +I  +   A  A       ++ N   +M+  G    +P ++
Sbjct: 517 GIPNEFFLDILLNTLEESKSIFYNKRAALNAALNYGEMDDQN-AAQMILVGIPLDEPHLK 576

Query: 716 PYLSMMLQTFRASKLLELRTKSRIFIPNGRGMMGCLDETRTLEYGQVFVQISSARHRNLS 775
            YLS++L+T +     +L+   ++ +     +MG +D T  L+  +V V + S +     
Sbjct: 577 NYLSILLKTEKN----DLKA-GKLPVTESYYLMGTVDPTGALKEDEVCVILESGQ----- 636

Query: 776 ETYAFNMSGSEHHLVIEGNVTVAKNPCLHPGDVRVLKAVNIPWLYHMVD----CVVFPQK 835
                          I G V V +NP LH GD+ +LKA  +  L   V      V FPQK
Sbjct: 637 ---------------ISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQK 696

Query: 836 GSRPHPNECSGSDLDGDIYFVCWDNELI-------PPRQITPMDYTPA--PPIQLDRDVT 895
           G R   +E +G D DGD+YF+  + EL+       P   +TP   + +   P QL  +  
Sbjct: 697 GPRSLGDEIAGGDFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAPSQLSPEEL 756

Query: 896 IEDVQEYFV--NYMVNDSLGIIANAHTAFADK---------EPFKARSSPCVELAKLFSI 949
            E++ E F+   +  ++ +GI A++     D+         E         +EL  ++  
Sbjct: 757 EEELFEMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYD 816

The following BLAST results are available for this feature:
BLAST of Sed0015641 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6599933.10.0e+0088.17RNA-dependent RNA polymerase 1, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022943173.10.0e+0088.00RNA-dependent RNA polymerase 1-like isoform X2 [Cucurbita moschata] >XP_02294317... [more]
XP_022943172.10.0e+0088.00RNA-dependent RNA polymerase 1-like isoform X1 [Cucurbita moschata][more]
XP_022994928.10.0e+0088.17probable RNA-dependent RNA polymerase 1 isoform X2 [Cucurbita maxima] >XP_022994... [more]
XP_022994920.10.0e+0088.17probable RNA-dependent RNA polymerase 1 isoform X1 [Cucurbita maxima][more]
BLAST of Sed0015641 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LQV20.0e+0064.29RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1[more]
Q0DXS31.2e-28366.16Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947... [more]
O825041.3e-21839.61RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1[more]
Q7XM314.0e-21538.86Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947... [more]
Q8LHH98.1e-16837.24Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica OX=39... [more]
BLAST of Sed0015641 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FXH50.0e+0088.00RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447985 PE=3 ... [more]
A0A6J1FSA20.0e+0088.00RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447985 PE=3 ... [more]
A0A6J1K2P90.0e+0088.17RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111490498 PE=3 SV... [more]
A0A6J1K2N60.0e+0088.17RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111490498 PE=3 SV... [more]
A0A1S3CPY10.0e+0084.22RNA-dependent RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103502906 PE=3 SV=1[more]
BLAST of Sed0015641 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G14790.10.0e+0064.29RNA-dependent RNA polymerase 1 [more]
AT4G11130.19.4e-22039.61RNA-dependent RNA polymerase 2 [more]
AT3G49500.11.4e-16736.84RNA-dependent RNA polymerase 6 [more]
AT2G19910.16.0e-2525.75RNA-dependent RNA polymerase family protein [more]
AT2G19930.11.6e-2225.85RNA-dependent RNA polymerase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePFAMPF05183RdRPcoord: 204..779
e-value: 1.2E-187
score: 625.1
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePANTHERPTHR23079RNA-DEPENDENT RNA POLYMERASEcoord: 4..951
NoneNo IPR availablePANTHERPTHR23079:SF44RNA-DEPENDENT RNA POLYMERASEcoord: 4..951

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0015641.1Sed0015641.1mRNA
Sed0015641.2Sed0015641.2mRNA
Sed0015641.3Sed0015641.3mRNA
Sed0015641.4Sed0015641.4mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0031047 gene silencing by RNA
biological_process GO:0001172 transcription, RNA-templated
molecular_function GO:0003723 RNA binding
molecular_function GO:0003968 RNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0003676 nucleic acid binding