Sed0015565 (gene) Chayote v1

Overview


Name	Sed0015565
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Thioredoxin
Location	LG14: 3931454 .. 3933072 (+)
RNA-Seq Expression	Sed0015565
Synteny	Sed0015565

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGAAGATAAAAGGTAAATCCACATTCCAATCGCTAGTTGAAGTTGGTAGCCAGAATGGAAGACACTGAAAAGAAGGGATTAGAAGGCAGTGGTTTGGATCTTCCACTGAATCGCCATTGTAATTTGAAAACTGCTTCTTCCGATCAAGACTTCAAGGATGTTCTTCTTCAAATCAAATCCTCCAAAACCACTGTAAAAAACCCCCCCTCGTTCATTTTCTTTCCCATTTCCCTAAATTCTTGGAAATTTGTGTTGACGTGATTTGGATGAAGCTTTTCTGTTATGGGGTTTTGGGATTTTGACTGTTTGATTTTGTTTGTTCAATACTTTGCAGGCTGTTATCAATTATGGTGCTTCCTGGTGAGTTTTAACTTTCTTTTCCGGATTGTACGCACGTAAGGTGTTTGATGTTTTGCCTGTATGAGAAATGCTGAAAAAGAAAGATTATTTAGGCGATTGATTTGTTTCATAAGAGATGATTTAAACTTTCACGTCAATTTTGAGTTTAATCCATGATGATTGATGACCGCCTATCTGAAAATTAATTTCTTTGACAATTAGATATAGTAGAGTAAGATAATTTATCTTGTAAAAGTAGTCGCATAGTAGAGTAAGATAATTTATCTTGTAAAAGTAGTCGCATAAGGGACTTGGATTTTAAGGGGGTATTTGCTTCTCAAAGGTAACAACGCTCACCCTTACGCTAGCTATCTGGAGACATCAAAGGAATGGAGACACGTGAATTGTCTACAAATTAATGTTGCAAGTGAGTTTCGAACTTAGGACCTTGAGGGGAGCATGCCTTCAAAGTCCAATCATTTTCGAACTCAGTAAGAGAATTAGGGGAAAATGATTGGCAAGAAGATTTATCGTCTGTATCTAGGTGAAGGGAATGATTAGGAAGGAACTGTTACTTATTATGGGAGAATAAAATGTAGTTATGGGAAGAATAAAAAAATGGTTATGAAAAAATGAGATCGTGAGGAGAATGATTCTTGGTGGTCCAAAGGTGGTAACTGGATCATTCTCACTATAACCATTCTCATTCTCTTTCCGTTTTCATTTCACCATTGGGGTTGATAGAATCTTGTACTAAAATTTTAACCTCAAGTTCTTTGTATTTCAGAGCTCATGGATTGGGGTTTGCTGATATTTGAATCTGAAGGGCTTAAAAGGGATTGTTGTTGTTGGTTTCAGGTGTGGCGTGTGCAGTCAGATTCTTCCAGCTTTCTGTCGACTGAGTAACAATTTTCCAAAGGTTTCTTTCATCTATGCAGATATTGATGAATGCCCAGAAACAACTGAGCACATTCGTTACACCCCAACATTTCATTTTTATCGTGACGGTGAAAGAGTAGACGAGATGTTCGGTGCCGGGGAAGAACGGCTGCATGACAGGTTGTGGTTGCACTCCGAAAGCCAAGATTAGAGTAAACTACCTCATTGTTGTCATCAGTAGTTATTAGGATGGAAATATACACTATATTTGGATTAGCCTTTGTTTCTGAAGTTGATCTTCTGCAATTGAGTTTGTTTATTGAACAATCTAATTCTCTTGTTATTCAAAATCATTTCACTCAAGAGCAGCCTAGTATTTCACATTTCCTTTTTACGTCG

mRNA sequence

TTAGAAGATAAAAGGTAAATCCACATTCCAATCGCTAGTTGAAGTTGGTAGCCAGAATGGAAGACACTGAAAAGAAGGGATTAGAAGGCAGTGGTTTGGATCTTCCACTGAATCGCCATTGTAATTTGAAAACTGCTTCTTCCGATCAAGACTTCAAGGATGTTCTTCTTCAAATCAAATCCTCCAAAACCACTGCTGTTATCAATTATGGTGCTTCCTGGTGTGGCGTGTGCAGTCAGATTCTTCCAGCTTTCTGTCGACTGAGTAACAATTTTCCAAAGGTTTCTTTCATCTATGCAGATATTGATGAATGCCCAGAAACAACTGAGCACATTCGTTACACCCCAACATTTCATTTTTATCGTGACGGTGAAAGAGTAGACGAGATGTTCGGTGCCGGGGAAGAACGGCTGCATGACAGGTTGTGGTTGCACTCCGAAAGCCAAGATTAGAGTAAACTACCTCATTGTTGTCATCAGTAGTTATTAGGATGGAAATATACACTATATTTGGATTAGCCTTTGTTTCTGAAGTTGATCTTCTGCAATTGAGTTTGTTTATTGAACAATCTAATTCTCTTGTTATTCAAAATCATTTCACTCAAGAGCAGCCTAGTATTTCACATTTCCTTTTTACGTCG

Coding sequence (CDS)

ATGGAAGACACTGAAAAGAAGGGATTAGAAGGCAGTGGTTTGGATCTTCCACTGAATCGCCATTGTAATTTGAAAACTGCTTCTTCCGATCAAGACTTCAAGGATGTTCTTCTTCAAATCAAATCCTCCAAAACCACTGCTGTTATCAATTATGGTGCTTCCTGGTGTGGCGTGTGCAGTCAGATTCTTCCAGCTTTCTGTCGACTGAGTAACAATTTTCCAAAGGTTTCTTTCATCTATGCAGATATTGATGAATGCCCAGAAACAACTGAGCACATTCGTTACACCCCAACATTTCATTTTTATCGTGACGGTGAAAGAGTAGACGAGATGTTCGGTGCCGGGGAAGAACGGCTGCATGACAGGTTGTGGTTGCACTCCGAAAGCCAAGATTAG

Protein sequence

MEDTEKKGLEGSGLDLPLNRHCNLKTASSDQDFKDVLLQIKSSKTTAVINYGASWCGVCSQILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDEMFGAGEERLHDRLWLHSESQD

Homology

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BLAST of Sed0015565 vs. NCBI nr
Match: XP_022143884.1 (thioredoxin-like 3-3 [Momordica charantia])

HSP 1 Score: 256.1 bits (653), Expect = 1.6e-64
Identity = 119/127 (93.70%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 1   MEDTEKKGLEGSGLDLPLNRHCNLKTASSDQDFKDVLLQIKSSKTTAVINYGASWCGVCS 60
           MEDTEKKGLEG+GLDLP+NRH NLK+ASSDQDFKDVLLQIKSSKTTAVINYGASWC VCS
Sbjct: 1   MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCS 60

Query: 61  QILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDEMFGAGEERLH 120
           QILPAFCRLSNNFPK+ FIYADIDECPETT+HIRYTPTFHFYRDGERVDEMFGAGEERLH
Sbjct: 61  QILPAFCRLSNNFPKLYFIYADIDECPETTQHIRYTPTFHFYRDGERVDEMFGAGEERLH 120

Query: 121 DRLWLHS 128
           DRLWLHS
Sbjct: 121 DRLWLHS 127

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BLAST of Sed0015565 vs. NCBI nr
Match: XP_022963258.1 (thioredoxin-like 3-3 [Cucurbita moschata] >XP_022963259.1 thioredoxin-like 3-3 [Cucurbita moschata] >XP_022963260.1 thioredoxin-like 3-3 [Cucurbita moschata] >XP_022963261.1 thioredoxin-like 3-3 [Cucurbita moschata])

HSP 1 Score: 251.1 bits (640), Expect = 5.1e-63
Identity = 118/127 (92.91%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 1   MEDTEKKGLEGSGLDLPLNRHCNLKTASSDQDFKDVLLQIKSSKTTAVINYGASWCGVCS 60
           MED EKKGLEG+GLD  +NRH NLK+ASSDQDFKDVLLQIKSSKTTAVINYGASWC VCS
Sbjct: 1   MEDKEKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCS 60

Query: 61  QILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDEMFGAGEERLH 120
           QILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDEMFG GEERLH
Sbjct: 61  QILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDEMFGTGEERLH 120

Query: 121 DRLWLHS 128
           DRLWLHS
Sbjct: 121 DRLWLHS 127

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BLAST of Sed0015565 vs. NCBI nr
Match: XP_008462474.1 (PREDICTED: thioredoxin-like 3-3 [Cucumis melo] >XP_008462475.1 PREDICTED: thioredoxin-like 3-3 [Cucumis melo] >XP_008462476.1 PREDICTED: thioredoxin-like 3-3 [Cucumis melo] >XP_008462478.1 PREDICTED: thioredoxin-like 3-3 [Cucumis melo] >TYK07313.1 thioredoxin-like 3-3 [Cucumis melo var. makuwa])

HSP 1 Score: 249.6 bits (636), Expect = 1.5e-62
Identity = 117/127 (92.13%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 1   MEDTEKKGLEGSGLDLPLNRHCNLKTASSDQDFKDVLLQIKSSKTTAVINYGASWCGVCS 60
           MED EKKGLEG+G  LP+N H NLK+ASSDQDFKDVLLQIKSSKTTAVINYGASWC VCS
Sbjct: 1   MEDKEKKGLEGTGSCLPVNHHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCS 60

Query: 61  QILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDEMFGAGEERLH 120
           QILPAFCRLSNNFPKVSFIYADIDECPETT+HIRYTPTFHFYRDGERVDEMFGAGEERLH
Sbjct: 61  QILPAFCRLSNNFPKVSFIYADIDECPETTQHIRYTPTFHFYRDGERVDEMFGAGEERLH 120

Query: 121 DRLWLHS 128
           DRLWLHS
Sbjct: 121 DRLWLHS 127

[Close]

BLAST of Sed0015565 vs. NCBI nr
Match: XP_011657665.1 (thioredoxin-like 3-3 [Cucumis sativus] >XP_031742982.1 thioredoxin-like 3-3 [Cucumis sativus] >KGN48189.1 hypothetical protein Csa_003651 [Cucumis sativus])

HSP 1 Score: 249.2 bits (635), Expect = 1.9e-62
Identity = 117/127 (92.13%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 1   MEDTEKKGLEGSGLDLPLNRHCNLKTASSDQDFKDVLLQIKSSKTTAVINYGASWCGVCS 60
           MED EKKGLEG+GL LP+N H NLK+ASSDQDFKDVLLQIKSSKTTAVINYGASWC VCS
Sbjct: 1   MEDKEKKGLEGTGLCLPVNHHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCS 60

Query: 61  QILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDEMFGAGEERLH 120
           QILPAFCRLSNNFPKVSFIYADIDECPETT+HIRYTPTFHFYR GERVDEMFGAGEERLH
Sbjct: 61  QILPAFCRLSNNFPKVSFIYADIDECPETTQHIRYTPTFHFYRGGERVDEMFGAGEERLH 120

Query: 121 DRLWLHS 128
           DRLWLHS
Sbjct: 121 DRLWLHS 127

[Close]

BLAST of Sed0015565 vs. NCBI nr
Match: XP_022972722.1 (thioredoxin-like 3-3 [Cucurbita maxima] >XP_022972723.1 thioredoxin-like 3-3 [Cucurbita maxima] >XP_022972724.1 thioredoxin-like 3-3 [Cucurbita maxima] >XP_022972725.1 thioredoxin-like 3-3 [Cucurbita maxima] >XP_023518471.1 thioredoxin-like 3-3 [Cucurbita pepo subsp. pepo] >XP_023518472.1 thioredoxin-like 3-3 [Cucurbita pepo subsp. pepo] >XP_023518473.1 thioredoxin-like 3-3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 249.2 bits (635), Expect = 1.9e-62
Identity = 117/127 (92.13%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 1   MEDTEKKGLEGSGLDLPLNRHCNLKTASSDQDFKDVLLQIKSSKTTAVINYGASWCGVCS 60
           MED EKKGLEG+GLD  ++RH NLK+ASSDQDFKDVLLQIKSSKTTAVINYGASWC VCS
Sbjct: 1   MEDKEKKGLEGAGLDPTVSRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCS 60

Query: 61  QILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDEMFGAGEERLH 120
           QILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDEMFG GEERLH
Sbjct: 61  QILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDEMFGTGEERLH 120

Query: 121 DRLWLHS 128
           DRLWLHS
Sbjct: 121 DRLWLHS 127

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BLAST of Sed0015565 vs. ExPASy Swiss-Prot
Match: Q7XSQ7 (Thioredoxin-like 3-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0560200 PE=2 SV=2)

HSP 1 Score: 198.7 bits (504), Expect = 4.0e-50
Identity = 90/125 (72.00%), Postives = 104/125 (83.20%), Query Frame = 0


Query: 3   DTEKKGLEGSGLDLPLNRHCNLKTASSDQDFKDVLLQIKSSKTTAVINYGASWCGVCSQI 62
           + +K GLEG+GL LP + H NL++A SDQ  K +L  +KSSK+ AVINYGASWC VCSQI
Sbjct: 5   EAKKTGLEGTGLSLPGSSHGNLRSAGSDQQLKQMLDSLKSSKSPAVINYGASWCRVCSQI 64

Query: 63  LPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDEMFGAGEERLHDR 122
           LP FCR SN F  ++FIYADIDECPETT++IRYTPTFHFYRDGE+VDEM G GEERLHDR
Sbjct: 65  LPPFCRFSNEFKNLTFIYADIDECPETTQNIRYTPTFHFYRDGEKVDEMLGTGEERLHDR 124

Query: 123 LWLHS 128
           LWLHS
Sbjct: 125 LWLHS 129

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BLAST of Sed0015565 vs. ExPASy Swiss-Prot
Match: Q8LCH9 (Thioredoxin-like 3-3 OS=Arabidopsis thaliana OX=3702 GN=At3g53220 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-45
Identity = 87/124 (70.16%), Postives = 101/124 (81.45%), Query Frame = 0


Query: 6   KKGLEGSGLDL--PLNRHCNLKTASSDQDFKDVLLQIKSSKTTAVINYGASWCGVCSQIL 65
           K+  EG+ L+     N + N+K A +DQ F  +L  IKSSK+ AVINYGASWCGVCSQIL
Sbjct: 3   KQESEGANLEFESKSNDNGNVKIAPNDQSFLTILDDIKSSKSPAVINYGASWCGVCSQIL 62

Query: 66  PAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDEMFGAGEERLHDRL 125
           PAF +LSN+F K+ F+YADIDECPETT HIRYTPTF FYRDGE+VDEMFGAGE+RLHDRL
Sbjct: 63  PAFRKLSNSFSKLKFVYADIDECPETTRHIRYTPTFQFYRDGEKVDEMFGAGEQRLHDRL 122

Query: 126 WLHS 128
           WLHS
Sbjct: 123 WLHS 126

[Close]

BLAST of Sed0015565 vs. ExPASy Swiss-Prot
Match: P85801 (Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.3e-13
Identity = 34/103 (33.01%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 23  NLKTASSDQDFKDVLLQIKSSKTTAVINYGASWCGVCSQILPAFCRLSNNFPKVSFIYAD 82
           N+   ++ + +   L +        + N+ A WCG C QI P +  LS N+P + F+  D
Sbjct: 25  NVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVID 84

Query: 83  IDECPE--TTEHIRYTPTFHFYRDGERVDEMFGAGEERLHDRL 124
           +DE  +   +  I+ TPTF F RDG++VD++ GA +  LH ++
Sbjct: 85  VDELSDFSASWEIKATPTFFFLRDGQQVDKLVGANKPELHKKI 127

[Close]

BLAST of Sed0015565 vs. ExPASy Swiss-Prot
Match: G4NFB7 (Thioredoxin-2 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=TRX2 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.6e-13
Identity = 34/91 (37.36%), Postives = 53/91 (58.24%), Query Frame = 0


Query: 31  QDFKDVLLQIKSSKTTAVINYGASWCGVCSQILPAFCRLSNNFPKVSFIYADIDECPETT 90
           QDFKD L     S    ++++ A+WCG C  I P     S+ FP + ++  D+DE P+  
Sbjct: 74  QDFKDAL----KSHKFVLVDFFATWCGPCRAIAPKIAEWSDAFPNIHYVKVDVDEVPDVA 133

Query: 91  E--HIRYTPTFHFYRDGERVDEMFGAGEERL 120
           +  ++R  PTF  ++DGE+VDE+ GA   +L
Sbjct: 134 QEYNVRAMPTFLLFKDGEKVDEVVGANPPKL 160

[Close]

BLAST of Sed0015565 vs. ExPASy Swiss-Prot
Match: Q9AS75 (Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.1e-11
Identity = 30/103 (29.13%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 23  NLKTASSDQDFKDVLLQIKSSKTTAVINYGASWCGVCSQILPAFCRLSNNFPKVSFIYAD 82
           N+   S+ +++   + +        + N+ A+WCG C  I P +  +S  +P+  F+  D
Sbjct: 22  NVHVISNKENWDHKIAEANKDGKIVIANFSAAWCGPCRVIAPVYAEMSQTYPQFMFLTID 81

Query: 83  IDECPE--TTEHIRYTPTFHFYRDGERVDEMFGAGEERLHDRL 124
           +DE  +  ++  IR TPTF F ++GE+VD++ GA +  L  ++
Sbjct: 82  VDELMDFSSSWDIRATPTFFFLKNGEQVDKLVGANKPELEKKV 124

[Close]

BLAST of Sed0015565 vs. ExPASy TrEMBL
Match: A0A6J1CQN4 (thioredoxin-like 3-3 OS=Momordica charantia OX=3673 GN=LOC111013691 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 7.7e-65
Identity = 119/127 (93.70%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 1   MEDTEKKGLEGSGLDLPLNRHCNLKTASSDQDFKDVLLQIKSSKTTAVINYGASWCGVCS 60
           MEDTEKKGLEG+GLDLP+NRH NLK+ASSDQDFKDVLLQIKSSKTTAVINYGASWC VCS
Sbjct: 1   MEDTEKKGLEGTGLDLPVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCS 60

Query: 61  QILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDEMFGAGEERLH 120
           QILPAFCRLSNNFPK+ FIYADIDECPETT+HIRYTPTFHFYRDGERVDEMFGAGEERLH
Sbjct: 61  QILPAFCRLSNNFPKLYFIYADIDECPETTQHIRYTPTFHFYRDGERVDEMFGAGEERLH 120

Query: 121 DRLWLHS 128
           DRLWLHS
Sbjct: 121 DRLWLHS 127

[Close]

BLAST of Sed0015565 vs. ExPASy TrEMBL
Match: A0A6J1HH85 (thioredoxin-like 3-3 OS=Cucurbita moschata OX=3662 GN=LOC111463526 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.5e-63
Identity = 118/127 (92.91%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 1   MEDTEKKGLEGSGLDLPLNRHCNLKTASSDQDFKDVLLQIKSSKTTAVINYGASWCGVCS 60
           MED EKKGLEG+GLD  +NRH NLK+ASSDQDFKDVLLQIKSSKTTAVINYGASWC VCS
Sbjct: 1   MEDKEKKGLEGAGLDPTVNRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCS 60

Query: 61  QILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDEMFGAGEERLH 120
           QILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDEMFG GEERLH
Sbjct: 61  QILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDEMFGTGEERLH 120

Query: 121 DRLWLHS 128
           DRLWLHS
Sbjct: 121 DRLWLHS 127

[Close]

BLAST of Sed0015565 vs. ExPASy TrEMBL
Match: A0A1S3CH29 (thioredoxin-like 3-3 OS=Cucumis melo OX=3656 GN=LOC103500822 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 7.2e-63
Identity = 117/127 (92.13%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 1   MEDTEKKGLEGSGLDLPLNRHCNLKTASSDQDFKDVLLQIKSSKTTAVINYGASWCGVCS 60
           MED EKKGLEG+G  LP+N H NLK+ASSDQDFKDVLLQIKSSKTTAVINYGASWC VCS
Sbjct: 1   MEDKEKKGLEGTGSCLPVNHHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCS 60

Query: 61  QILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDEMFGAGEERLH 120
           QILPAFCRLSNNFPKVSFIYADIDECPETT+HIRYTPTFHFYRDGERVDEMFGAGEERLH
Sbjct: 61  QILPAFCRLSNNFPKVSFIYADIDECPETTQHIRYTPTFHFYRDGERVDEMFGAGEERLH 120

Query: 121 DRLWLHS 128
           DRLWLHS
Sbjct: 121 DRLWLHS 127

[Close]

BLAST of Sed0015565 vs. ExPASy TrEMBL
Match: A0A5D3C5X7 (Thioredoxin-like 3-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00280 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 7.2e-63
Identity = 117/127 (92.13%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 1   MEDTEKKGLEGSGLDLPLNRHCNLKTASSDQDFKDVLLQIKSSKTTAVINYGASWCGVCS 60
           MED EKKGLEG+G  LP+N H NLK+ASSDQDFKDVLLQIKSSKTTAVINYGASWC VCS
Sbjct: 1   MEDKEKKGLEGTGSCLPVNHHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCS 60

Query: 61  QILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDEMFGAGEERLH 120
           QILPAFCRLSNNFPKVSFIYADIDECPETT+HIRYTPTFHFYRDGERVDEMFGAGEERLH
Sbjct: 61  QILPAFCRLSNNFPKVSFIYADIDECPETTQHIRYTPTFHFYRDGERVDEMFGAGEERLH 120

Query: 121 DRLWLHS 128
           DRLWLHS
Sbjct: 121 DRLWLHS 127

[Close]

BLAST of Sed0015565 vs. ExPASy TrEMBL
Match: A0A6J1I9G9 (thioredoxin-like 3-3 OS=Cucurbita maxima OX=3661 GN=LOC111471240 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 9.4e-63
Identity = 117/127 (92.13%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 1   MEDTEKKGLEGSGLDLPLNRHCNLKTASSDQDFKDVLLQIKSSKTTAVINYGASWCGVCS 60
           MED EKKGLEG+GLD  ++RH NLK+ASSDQDFKDVLLQIKSSKTTAVINYGASWC VCS
Sbjct: 1   MEDKEKKGLEGAGLDPTVSRHGNLKSASSDQDFKDVLLQIKSSKTTAVINYGASWCRVCS 60

Query: 61  QILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDEMFGAGEERLH 120
           QILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDEMFG GEERLH
Sbjct: 61  QILPAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDEMFGTGEERLH 120

Query: 121 DRLWLHS 128
           DRLWLHS
Sbjct: 121 DRLWLHS 127

[Close]

BLAST of Sed0015565 vs. TAIR 10
Match: AT3G53220.1 (Thioredoxin superfamily protein )

HSP 1 Score: 183.7 bits (465), Expect = 9.4e-47
Identity = 87/124 (70.16%), Postives = 101/124 (81.45%), Query Frame = 0


Query: 6   KKGLEGSGLDL--PLNRHCNLKTASSDQDFKDVLLQIKSSKTTAVINYGASWCGVCSQIL 65
           K+  EG+ L+     N + N+K A +DQ F  +L  IKSSK+ AVINYGASWCGVCSQIL
Sbjct: 3   KQESEGANLEFESKSNDNGNVKIAPNDQSFLTILDDIKSSKSPAVINYGASWCGVCSQIL 62

Query: 66  PAFCRLSNNFPKVSFIYADIDECPETTEHIRYTPTFHFYRDGERVDEMFGAGEERLHDRL 125
           PAF +LSN+F K+ F+YADIDECPETT HIRYTPTF FYRDGE+VDEMFGAGE+RLHDRL
Sbjct: 63  PAFRKLSNSFSKLKFVYADIDECPETTRHIRYTPTFQFYRDGEKVDEMFGAGEQRLHDRL 122

Query: 126 WLHS 128
           WLHS
Sbjct: 123 WLHS 126

[Close]

BLAST of Sed0015565 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 65.1 bits (157), Expect = 4.8e-11
Identity = 32/98 (32.65%), Postives = 51/98 (52.04%), Query Frame = 0


Query: 31  QDFKDVLLQIKSSKTTAVINYGASWCGVCSQILPAFCRLSNNFPKVSFIYADIDECPETT 90
           + + + L +   SKT  V+++ ASWCG C  I P F  L+   P V F+  D DE     
Sbjct: 15  ETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVA 74

Query: 91  EH--IRYTPTFHFYRDGERVDEMFGAGEERLHDRLWLH 127
               I+  PTF F ++G+ +D++ GA ++ L   +  H
Sbjct: 75  SDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]

BLAST of Sed0015565 vs. TAIR 10
Match: AT3G08710.1 (thioredoxin H-type 9 )

HSP 1 Score: 63.2 bits (152), Expect = 1.8e-10
Identity = 28/103 (27.18%), Postives = 54/103 (52.43%), Query Frame = 0


Query: 23  NLKTASSDQDFKDVLLQIKSSKTTAVINYGASWCGVCSQILPAFCRLSNNFPKVSFIYAD 82
           N+   ++ + + D L +        V N+ A+WCG C  + P F  LS     + F+  D
Sbjct: 24  NVHLITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVD 83

Query: 83  IDECPE--TTEHIRYTPTFHFYRDGERVDEMFGAGEERLHDRL 124
           +DE  +  ++  I+ TPTF F ++G+++ ++ GA +  L  ++
Sbjct: 84  VDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKKV 126

[Close]

BLAST of Sed0015565 vs. TAIR 10
Match: AT3G08710.2 (thioredoxin H-type 9 )

HSP 1 Score: 63.2 bits (152), Expect = 1.8e-10
Identity = 28/103 (27.18%), Postives = 54/103 (52.43%), Query Frame = 0


Query: 23  NLKTASSDQDFKDVLLQIKSSKTTAVINYGASWCGVCSQILPAFCRLSNNFPKVSFIYAD 82
           N+   ++ + + D L +        V N+ A+WCG C  + P F  LS     + F+  D
Sbjct: 24  NVHLITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVD 83

Query: 83  IDECPE--TTEHIRYTPTFHFYRDGERVDEMFGAGEERLHDRL 124
           +DE  +  ++  I+ TPTF F ++G+++ ++ GA +  L  ++
Sbjct: 84  VDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKKV 126

[Close]

BLAST of Sed0015565 vs. TAIR 10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin )

HSP 1 Score: 61.2 bits (147), Expect = 7.0e-10
Identity = 29/92 (31.52%), Postives = 49/92 (53.26%), Query Frame = 0


Query: 41  KSSKTTAVINYGASWCGVCSQILPAFCRLSNNFPKVSFIYADIDECPETTE--HIRYTPT 100
           K +    ++ + A+WCG C  + P +  L+    +V F+  DID+  +     +I   PT
Sbjct: 289 KKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRVVFLKVDIDKANDVAASWNISSVPT 348

Query: 101 FHFYRDGERVDEMFGAGEERLHDRLWLHSESQ 131
           F F RDG+ VD++ GA +  L  ++  HS S+
Sbjct: 349 FCFIRDGKEVDKVVGADKGSLEQKIAQHSSSK 380

The following BLAST results are available for this feature:

BLAST of Sed0015565 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143884.1	1.6e-64	93.70	thioredoxin-like 3-3 [Momordica charantia]	[more]
XP_022963258.1	5.1e-63	92.91	thioredoxin-like 3-3 [Cucurbita moschata] >XP_022963259.1 thioredoxin-like 3-3 [...	[more]
XP_008462474.1	1.5e-62	92.13	PREDICTED: thioredoxin-like 3-3 [Cucumis melo] >XP_008462475.1 PREDICTED: thiore...	[more]
XP_011657665.1	1.9e-62	92.13	thioredoxin-like 3-3 [Cucumis sativus] >XP_031742982.1 thioredoxin-like 3-3 [Cuc...	[more]
XP_022972722.1	1.9e-62	92.13	thioredoxin-like 3-3 [Cucurbita maxima] >XP_022972723.1 thioredoxin-like 3-3 [Cu...	[more]

BLAST of Sed0015565 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XSQ7	4.0e-50	72.00	Thioredoxin-like 3-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0560200 PE...	[more]
Q8LCH9	1.3e-45	70.16	Thioredoxin-like 3-3 OS=Arabidopsis thaliana OX=3702 GN=At3g53220 PE=2 SV=1	[more]
P85801	2.3e-13	33.01	Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1	[more]
G4NFB7	8.6e-13	37.36	Thioredoxin-2 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) O...	[more]
Q9AS75	2.1e-11	29.13	Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 S...	[more]

BLAST of Sed0015565 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQN4	7.7e-65	93.70	thioredoxin-like 3-3 OS=Momordica charantia OX=3673 GN=LOC111013691 PE=4 SV=1	[more]
A0A6J1HH85	2.5e-63	92.91	thioredoxin-like 3-3 OS=Cucurbita moschata OX=3662 GN=LOC111463526 PE=4 SV=1	[more]
A0A1S3CH29	7.2e-63	92.13	thioredoxin-like 3-3 OS=Cucumis melo OX=3656 GN=LOC103500822 PE=4 SV=1	[more]
A0A5D3C5X7	7.2e-63	92.13	Thioredoxin-like 3-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202...	[more]
A0A6J1I9G9	9.4e-63	92.13	thioredoxin-like 3-3 OS=Cucurbita maxima OX=3661 GN=LOC111471240 PE=4 SV=1	[more]

BLAST of Sed0015565 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53220.1	9.4e-47	70.16	Thioredoxin superfamily protein	[more]
AT3G51030.1	4.8e-11	32.65	thioredoxin H-type 1	[more]
AT3G08710.1	1.8e-10	27.18	thioredoxin H-type 9	[more]
AT3G08710.2	1.8e-10	27.18	thioredoxin H-type 9	[more]
AT3G17880.1	7.0e-10	31.52	tetraticopeptide domain-containing thioredoxin	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 18..128 e-value: 4.6E-21 score: 76.8
None	No IPR available	CDD	cd02947	TRX_family	coord: 37..123 e-value: 1.92115E-23 score: 85.3024
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 29..119 e-value: 1.7E-15 score: 56.9
IPR044193	Thioredoxin-like 3-3	PANTHER	PTHR47571	THIOREDOXIN-LIKE 3-3	coord: 3..127
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 21..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015565.1	Sed0015565.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity