Sed0015559 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAACCCAATTAAAATGGTTGGAATCGCAAGAGAAGCAGGGATTATTGGGCGCTAAGATGAGCTTACTCAACTCGCACAGAGGCTTTGCGCCAATCGGCTCCTCATCTCCTTCTTCAACATCCGCTTCTCGCTACGCTCATTCTTCCTCATCTGGTAATGCTTCTCTCCAACGCTTTTTTTCTTCTTTTTCTTCCATGTTTGCAAGTTCTTCGCTCTGATTATTCGCTTTCTTATTGTTTCATTGTTAATCGCAAGTGTAAGCAGTTATGGTAGATTCCAAATATTTGCGATAGTTTATCAATTTGCATAATCTGAACGAATCTGTAGAGTTCATTTTTCGAGTCGTTTAGGATTGTGCTTGTTTGGTGCCTGATTCGGAACTATATTTCTCTGATGAACAAAACTATGCTGGATTTGGTTTTGATAATAGACATAAGATATTTGAATTGCGTGTGTATATATAAATAATAAAAACGAATGAGGTTGTAACCAAGAATAATATATAAAACATGTATAAGAATCAACTATCAACTTTTTTTGTTCACCGAAAGAAATTAAATTTTAATCAAGAATAATATATGAATTTTACATAAGATTCAACTATTAACCTTTGAACGTTGTGTTATGAAGAAAAGCTCACCAGGTGTGACTGGATAAGTAGAATATAAGTCGTGGACGAGAGGGAAACAAATGGAAATGGTTGTTGTATTCGTGAGTTGAAGAATTAAATTATTTAAGGTATTGAATCAGTTATGATTAAAAGGAAGTAGCAAAACTAGTTATTTTAATTCGCAGAAGACATGCTTAGGCACACCTTTTAAAACACCGTCCACAAGTATAGTAAAATTACTAGGATTGGTTTATACTCAAAGATGTTACGAGTTAAAGAATTAAGTCATTTAAATTATTCAAACGTCTGGAATCAGTTATGTTTTAAAATATAGTAAATAAGTCTTTTTTATTTTTTATTTTTAGTGAAAAAACAAAAAGCTCATAAGGCGCATACCTTGCGTGCCTGGTGAGCTTCATAGAAGGCACGCCTTTTAAAACACTGTCCACCGAGTATAGTAAAATCACCTCGATTGGTTTCTGCTCAAGCTGCTGTTATGATTTCTTACAAGTGTGAATCACAACTCAAGTTATTTCATGTATGATGGAAGGCAATTTATGATTCAAGTCTAAGCAATTTGAACCTCAATGGTGTAATGTGCAGAACATGTGACGTGTGGAACGCCAACTTGGATATGGATTGGCAAGGGAATCACTTTCATTTGCTTCAAGCCGAAGGGAACTTATTATGAAAGAATTTGTACCAACCTGACACCTGTGCAGGCAAGTAAAAAGAAAACAAAAACTGTCAAATTGATTGGAATAAGAAGGGAAAGCAGTTTATGTAAACCACAAAGTTACCTTACTACTTCCATCATGGGTTATGACTCTTTCTTTCTAATTTGCTTGCTTTCTTGTGCTGTTAATGTCACACAGTGACATTGCCTGGTTTGAAAAATGGAACACATTAAGCTGGTCTCAATACTCATGGATATCCAAAAAATAGTAGCAAACGCTTGTATTCTATAGATTGCACAGTGTCACAGTCGTGTGGCACGAGCTCTAATACGGTGAGCAAGTCAGCCAAACAAAAATGCAAAGCGGGTGACACAATTGAGTGCATCCTCCATCTCGGGACTTGAGAAAAGGTTTTCGAAAAAGGGAGAAAGAAGGTTTTGGAAATGTTTTTGTCTTTGAAAGGTTATACAACAATACAAAAAGGACCACATCAACTATATTGCATGCTCATATAACTCGATAGGAATGAAGTTTCAAAAAGTCATACCCCTCTATAGTACATTATAGGCCATTTTTGATGTGACTGACTTGCATATAAAAAATGGCTCGATAGGAAGGAAGTTTCAAGAAGTCATACCACCCTAAATGTAATTTCCCAACTATCTAACAAGAGGCCTAATAAGAGGATCCTATCATACATTATGAACCATTTTTGTTGTGACTGACTGGCATATCAAAATGGCGAGAAAACATACGCTCCGAAAAACACAAGGAAAATAACAACAACAAGAAAAGTAACTTCTAGCCTATGAAAACATGATAAAAAAGTTTGGAATGGGCACGCGACCATGGGCAACAGGCCGTGGACAAGCGTGACCGTGACGCACAACAATCACACCTTTCCTCCATATGGATACTAAAATTTTCAAATAGTTTAGATAATGATTTTCATCAACTATGTTATGTACGTATTGTGTCTTTTAAGTAGATGAAAATCATTGTATTACTGATTTTCTCAAAATAACATTTACATTCATGATCTCAGGAAGATAGGCTGAGAAGATTAAAGCGCCGAATGAAGGTCTACTTTGATGGTACAAGAATAGACCACCAGGTTTGTTTATATTCTCAAATTTGATACCCAAGTTAAGCACTCAGAAGCTTCCCCAGAGCACAACAACTAGAGTTCATATGTGAATAACTTTCAAACCACTGATAACATTTGTTGCTAATGTCTTTTTTCAACAATTTTTATGTTATTAGTTCTTTGTCTACACCTTGTTTTCTAGGAAACTTATTATGAATTTTTCACAAAGGACAGGAGGCTCTAAGAGCTCTGTGGTATGCAACTTATCCTGGTCAACAGCTTCAGGCATTGGTATCAGAACAGTGGAAAGAAATGGGATGGCAGGGAAGAGACCCATCAACTGATTTTAGGTTGTTATTTTGCTATATGAGTTGAGGTCTGCTTGTTTATCTCTTGTATTATCTTCTTTCATTCATTGCTCTGAAAAGCTTTTACCTAATCCAGAGGAGCTGGATTTATCTCTTTGGAGAATTTGTTGTTCTTTGCAAAGACATTCTCAGTAAGATCCTAAATTTCATTTGATTCTGCACATTAATTTTTAGCTTCTTTTTCACCTGAATGGGCCAAAAAGTTCCTGAAATTGGGTTTAAACCTCCTTATAGATCACTAAGTATATAACATGTTATTGCTTTTACTGATCCTAACTTTCTTTTTCCTTACCTTTCAGACATCTTTCCAACGTCTGTTGAGAAAACAAGGAAGAAAGCCAGCTGCTTGGGAATACCCCTTTGCTGTTGCCGGTGTAAATATCACCTTTATGATTATGCAAATGCTTGATCTTGATGCTTGTGAGTAGCAAATTCATTTCTTCGCACTATACTAACATACAAATATACCATAGCTACTGAAGTATACTATTAGAGCTTCATTGGTTAAATGTTTCTAAAAATGAAGGACAAGCATTGCACTTTGATAGGTTAACTTTCATATTCTTGGAAAGAGAACTAAGAAAGCTCATTTTTTCCAAAGCAGCAAAACCAAAGACTTTTATCAGATCAGTATTCCTTCAGATTTTGTCAGGTAAATCTCTAAACTTAATCTTGGAACATATAAAGTTTGAATGGTGTATCATAAAGTGCTCATAGGGAATAAATTCAATCTATGGTAGTCATCTATTTAGAAGTTAATTTTCTATTAATTATTTTTACAACCAAATATACTAGGGATAAAAGGTTGTCCTATGAGAATAGTAGAGATACGCATAAGCTGATATGAACATTCATAGATACAAAAAAACACGAGATATAATTGCCCTTTGAATGGTATTTTCTGATAACAGAGAATGAGTGGGCATTTGACTTGCTTTACTGCGTGGCCTTCGTGGTTATGGACAAACAATGGCAGGAGAGAAATGCTACCTACATGGAGTTCAATGTAAGTGAAAGTAATTTTACTGGCATTTTTGGCCATTTAACTTTTTAGCACGTAATTAGGTCCTTTTAAGCAAGAACAAACTGCAGCCACATTTAAGACCCGTTTGATAATGTTCCCGTTTCCTGTTTCTCGTTTCTGTTTTTTTTTTTTTTTAGAAACAGACTTGTTTGGTAACTGTTCTCGTTTCTTGTTCCCAAAATTAAAAGAAACGTTTTCAATATTTAGCTCCAAAATGAGAAACTCTCAAATCAAGTTTCTCCTGTTTCTGTTTCTGATTTTTTGTTTGTGTTTCTTCAGTTTTGTTTTTATTCTTCTATATAGAAGTCATTAATGTTTACAATGTTGTACTGTGACATAGTGGCAAGTGTTGTAGTAATATTTTTGTATTAACTTCTCCAACCATGGTTCGATTCTTAGAAATTTTTTATTTTTAGTTTGATTTTTTTAAAATAAAATTTTATTATTTCTTCCGTTTATTTTAATAACATTTCATTTGAATTTTTTTTAAATATATATTTATATATTATTTTAATTTCTAAACCATAATATTAATATTATGTATTATATTATTTTAATTTTTTTTTACACAAACAGTATATTATTTTATTTTCAATATATAATAACTATTATACTTCTTTTTTTATATAAAAAATTTGTTATCTTAATTTTAATATATACTTTTTTTAGGAACAATATATACTTATTTTTAAACTTAATTTCTATAAATAGTAATATTTATGATTCTATATTACTAATTTAAATTATACTAATTTTATAGATGATTTTTTGAGTAAAAAAATGGAAAGAAAAAAAAAATCAACAAATATAAAAATTTTAGAAAAAAAGAATAAAATATAGAAAAATTAATTCAATCACATTAAAGTGATTGTCACAAAATTACTAGATTTCAATCTAGTTAATATTATGCTATAATTTGCCATTGATAACAAATTTCTAATTTTGATTTAAAAAAAATCAAATTTTATATTTTATAAACTATCTTGATTAATATAAATATAGTATTTATATATAACTGTTTTATTTTATTTCATAATTTTACTATAAATATGTCAACAACAAATTCTTATTTTTCATGATTTTTAATGTATGTAATGTTTTTTAAAGACAAAAAAAAAAACTAGAAACTAGAAAAGGTTATCAAACAAGTTTTGTTTCCATCTCTATTTTTTTAAGAAACAAGAAACAAAAATAGTTATCAAACACATTCTAGTTTTTTGTTCTAATTAAAAACAGGAACAAGAAACAAGAATTAAGACCAAGAAACAAGAAACTAGAAATGAGAATGTTATCAAACGAGCCCTTAGCTTCTACATGATTTTGTGCTTTCAAAAATAGGAAAAAAAACCAGTGACATGATTTATAATACACTAAATTAAAAGGTTGTGAGTTTAAATCTCCACCACAAAAAAGTAATTCGCATTTACTCTTGGACGTTAAAAAAAGAAATGTTGATGAAATCCCTTTTACGTTCAAAGTAAAACAAAAATGGAAGTGAAATCTACTCATTTAGTGTTTGGGGCAAGAAGTATGAATGATTACGGGGAGGATGAAAATTAAGGGGAGTATTATTATCAGGGAAATGGTTATCTGCGTTTGATTGAAGAGAACGATTATAAAGAGAACTGTAACCCGTTACTTGTGTATGGAGTGAAAATAATAATTATAAGAAGAAAATAAAATAGTATGGGGAGAATGAAAAAGGAGTTATGGAGAAAATGAAAAGGTGCTTATGAGAGAATGGTGGCCTAAACATCAGCGAGAGAATGATTCTCCCCATAATCATTTTCATCCTTCTTACCCTAATCACATCATTATTAAAGACAGGGATAACATAAATGAACCGATAAAAATGAATAATCAAACTATACATTTGTTGTAGGATGTATTGAAGTCCACGCGAGCTCAGTTGGAGAAAGAACTTTTAATGGAGCATGTTTTTCGGATAGAAGACATGCCTTCTTACGACCTTCTTTTGGCATTAGATTTCAGGTAGAGTAATCGTCACACCACTTAAAAAAATCTGTCACGAGTTCTGTTCTAGAACATTATCTTGTACATTATCCATTTCTCAACAACATGGTTAAAAAATTAAATATTATTATTTTTTGCTTGTTTACTTTTATAATATTAGTTTTGAG AAAAACCCAATTAAAATGGTTGGAATCGCAAGAGAAGCAGGGATTATTGGGCGCTAAGATGAGCTTACTCAACTCGCACAGAGGCTTTGCGCCAATCGGCTCCTCATCTCCTTCTTCAACATCCGCTTCTCGCTACGCTCATTCTTCCTCATCTGAACATGTGACGTGTGGAACGCCAACTTGGATATGGATTGGCAAGGGAATCACTTTCATTTGCTTCAAGCCGAAGGGAACTTATTATGAAAGAATTTGTACCAACCTGACACCTGTGCAGGAAGATAGGCTGAGAAGATTAAAGCGCCGAATGAAGGTCTACTTTGATGGTACAAGAATAGACCACCAGGAGGCTCTAAGAGCTCTGTGGTATGCAACTTATCCTGGTCAACAGCTTCAGGCATTGGTATCAGAACAGTGGAAAGAAATGGGATGGCAGGGAAGAGACCCATCAACTGATTTTAGAGGAGCTGGATTTATCTCTTTGGAGAATTTGTTGTTCTTTGCAAAGACATTCTCAACATCTTTCCAACGTCTGTTGAGAAAACAAGGAAGAAAGCCAGCTGCTTGGGAATACCCCTTTGCTGTTGCCGGTGTAAATATCACCTTTATGATTATGCAAATGCTTGATCTTGATGCTTCAGCAAAACCAAAGACTTTTATCAGATCAGTATTCCTTCAGATTTTGTCAGAGAATGAGTGGGCATTTGACTTGCTTTACTGCGTGGCCTTCGTGGTTATGGACAAACAATGGCAGGAGAGAAATGCTACCTACATGGAGTTCAATGATGTATTGAAGTCCACGCGAGCTCAGTTGGAGAAAGAACTTTTAATGGAGCATGTTTTTCGGATAGAAGACATGCCTTCTTACGACCTTCTTTTGGCATTAGATTTCAGGTAGAGTAATCGTCACACCACTTAAAAAAATCTGTCACGAGTTCTGTTCTAGAACATTATCTTGTACATTATCCATTTCTCAACAACATGGTTAAAAAATTAAATATTATTATTTTTTGCTTGTTTACTTTTATAATATTAGTTTTGAG ATGAGCTTACTCAACTCGCACAGAGGCTTTGCGCCAATCGGCTCCTCATCTCCTTCTTCAACATCCGCTTCTCGCTACGCTCATTCTTCCTCATCTGAACATGTGACGTGTGGAACGCCAACTTGGATATGGATTGGCAAGGGAATCACTTTCATTTGCTTCAAGCCGAAGGGAACTTATTATGAAAGAATTTGTACCAACCTGACACCTGTGCAGGAAGATAGGCTGAGAAGATTAAAGCGCCGAATGAAGGTCTACTTTGATGGTACAAGAATAGACCACCAGGAGGCTCTAAGAGCTCTGTGGTATGCAACTTATCCTGGTCAACAGCTTCAGGCATTGGTATCAGAACAGTGGAAAGAAATGGGATGGCAGGGAAGAGACCCATCAACTGATTTTAGAGGAGCTGGATTTATCTCTTTGGAGAATTTGTTGTTCTTTGCAAAGACATTCTCAACATCTTTCCAACGTCTGTTGAGAAAACAAGGAAGAAAGCCAGCTGCTTGGGAATACCCCTTTGCTGTTGCCGGTGTAAATATCACCTTTATGATTATGCAAATGCTTGATCTTGATGCTTCAGCAAAACCAAAGACTTTTATCAGATCAGTATTCCTTCAGATTTTGTCAGAGAATGAGTGGGCATTTGACTTGCTTTACTGCGTGGCCTTCGTGGTTATGGACAAACAATGGCAGGAGAGAAATGCTACCTACATGGAGTTCAATGATGTATTGAAGTCCACGCGAGCTCAGTTGGAGAAAGAACTTTTAATGGAGCATGTTTTTCGGATAGAAGACATGCCTTCTTACGACCTTCTTTTGGCATTAGATTTCAGGTAG MSLLNSHRGFAPIGSSSPSSTSASRYAHSSSSEHVTCGTPTWIWIGKGITFICFKPKGTYYERICTNLTPVQEDRLRRLKRRMKVYFDGTRIDHQEALRALWYATYPGQQLQALVSEQWKEMGWQGRDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGRKPAAWEYPFAVAGVNITFMIMQMLDLDASAKPKTFIRSVFLQILSENEWAFDLLYCVAFVVMDKQWQERNATYMEFNDVLKSTRAQLEKELLMEHVFRIEDMPSYDLLLALDFR Homology
BLAST of Sed0015559 vs. NCBI nr
Match: KAG6601596.1 (REF/SRPP-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 474.6 bits (1220), Expect = 6.0e-130 Identity = 240/277 (86.64%), Postives = 255/277 (92.06%), Query Frame = 0
BLAST of Sed0015559 vs. NCBI nr
Match: XP_023541043.1 (ELMO domain-containing protein C-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 474.2 bits (1219), Expect = 7.9e-130 Identity = 239/278 (85.97%), Postives = 256/278 (92.09%), Query Frame = 0
BLAST of Sed0015559 vs. NCBI nr
Match: XP_022998471.1 (ELMO domain-containing protein C [Cucurbita maxima]) HSP 1 Score: 473.8 bits (1218), Expect = 1.0e-129 Identity = 238/278 (85.61%), Postives = 256/278 (92.09%), Query Frame = 0
BLAST of Sed0015559 vs. NCBI nr
Match: XP_023541031.1 (ELMO domain-containing protein C-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 472.2 bits (1214), Expect = 3.0e-129 Identity = 238/277 (85.92%), Postives = 255/277 (92.06%), Query Frame = 0
BLAST of Sed0015559 vs. NCBI nr
Match: XP_022956718.1 (ELMO domain-containing protein B isoform X2 [Cucurbita moschata]) HSP 1 Score: 471.9 bits (1213), Expect = 3.9e-129 Identity = 239/278 (85.97%), Postives = 254/278 (91.37%), Query Frame = 0
BLAST of Sed0015559 vs. ExPASy Swiss-Prot
Match: Q54YW1 (ELMO domain-containing protein A OS=Dictyostelium discoideum OX=44689 GN=elmoA PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 8.5e-26 Identity = 64/195 (32.82%), Postives = 101/195 (51.79%), Query Frame = 0
BLAST of Sed0015559 vs. ExPASy Swiss-Prot
Match: Q54RS7 (ELMO domain-containing protein C OS=Dictyostelium discoideum OX=44689 GN=elmoC PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 3.3e-22 Identity = 66/204 (32.35%), Postives = 111/204 (54.41%), Query Frame = 0
BLAST of Sed0015559 vs. ExPASy Swiss-Prot
Match: Q54VR8 (ELMO domain-containing protein B OS=Dictyostelium discoideum OX=44689 GN=elmoB PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.1e-20 Identity = 51/178 (28.65%), Postives = 97/178 (54.49%), Query Frame = 0
BLAST of Sed0015559 vs. ExPASy Swiss-Prot
Match: Q8IZ81 (ELMO domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ELMOD2 PE=1 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.6e-16 Identity = 49/156 (31.41%), Postives = 81/156 (51.92%), Query Frame = 0
BLAST of Sed0015559 vs. ExPASy Swiss-Prot
Match: Q08DZ3 (ELMO domain-containing protein 2 OS=Bos taurus OX=9913 GN=ELMOD2 PE=1 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 7.9e-16 Identity = 48/156 (30.77%), Postives = 82/156 (52.56%), Query Frame = 0
BLAST of Sed0015559 vs. ExPASy TrEMBL
Match: A0A6J1KAA5 (ELMO domain-containing protein C OS=Cucurbita maxima OX=3661 GN=LOC111493093 PE=4 SV=1) HSP 1 Score: 473.8 bits (1218), Expect = 5.0e-130 Identity = 238/278 (85.61%), Postives = 256/278 (92.09%), Query Frame = 0
BLAST of Sed0015559 vs. ExPASy TrEMBL
Match: A0A6J1GXX7 (ELMO domain-containing protein B isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458352 PE=4 SV=1) HSP 1 Score: 471.9 bits (1213), Expect = 1.9e-129 Identity = 239/278 (85.97%), Postives = 254/278 (91.37%), Query Frame = 0
BLAST of Sed0015559 vs. ExPASy TrEMBL
Match: A0A1S3BE42 (ELMO domain-containing protein A OS=Cucumis melo OX=3656 GN=LOC103488893 PE=4 SV=1) HSP 1 Score: 470.3 bits (1209), Expect = 5.5e-129 Identity = 241/280 (86.07%), Postives = 257/280 (91.79%), Query Frame = 0
BLAST of Sed0015559 vs. ExPASy TrEMBL
Match: A0A6J1GX58 (ELMO domain-containing protein B isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458352 PE=4 SV=1) HSP 1 Score: 469.9 bits (1208), Expect = 7.2e-129 Identity = 238/277 (85.92%), Postives = 253/277 (91.34%), Query Frame = 0
BLAST of Sed0015559 vs. ExPASy TrEMBL
Match: A0A0A0KVA2 (ELMO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G589930 PE=4 SV=1) HSP 1 Score: 464.5 bits (1194), Expect = 3.0e-127 Identity = 239/279 (85.66%), Postives = 255/279 (91.40%), Query Frame = 0
BLAST of Sed0015559 vs. TAIR 10
Match: AT1G67400.1 (ELMO/CED-12 family protein ) HSP 1 Score: 363.6 bits (932), Expect = 1.4e-100 Identity = 181/257 (70.43%), Postives = 216/257 (84.05%), Query Frame = 0
BLAST of Sed0015559 vs. TAIR 10
Match: AT2G44770.1 (ELMO/CED-12 family protein ) HSP 1 Score: 275.8 bits (704), Expect = 3.8e-74 Identity = 135/245 (55.10%), Postives = 181/245 (73.88%), Query Frame = 0
BLAST of Sed0015559 vs. TAIR 10
Match: AT3G60260.1 (ELMO/CED-12 family protein ) HSP 1 Score: 269.2 bits (687), Expect = 3.6e-72 Identity = 134/245 (54.69%), Postives = 180/245 (73.47%), Query Frame = 0
BLAST of Sed0015559 vs. TAIR 10
Match: AT3G60260.2 (ELMO/CED-12 family protein ) HSP 1 Score: 269.2 bits (687), Expect = 3.6e-72 Identity = 134/245 (54.69%), Postives = 180/245 (73.47%), Query Frame = 0
BLAST of Sed0015559 vs. TAIR 10
Match: AT3G60260.4 (ELMO/CED-12 family protein ) HSP 1 Score: 269.2 bits (687), Expect = 3.6e-72 Identity = 134/245 (54.69%), Postives = 180/245 (73.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|