Sed0015554 (gene) Chayote v1

Overview


Name	Sed0015554
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Multidrug resistance protein ABC transporter family protein, putative
Location	LG09: 37060295 .. 37061541 (-)
RNA-Seq Expression	Sed0015554
Synteny	Sed0015554

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCATTACCATGGAGCTGTTCAACAAACAAACTCCTTCCCTCTATCCCCTCTTCTTATTTCATTCCTTCCTTTCTCCTCCCTCAACCTCACTTTGATAATTTCTCGATGGGCAACGTCACCTCCGTCTCTCGTGTCGGGAAAGTTGTTCTGTCTGACGGTTCTGTTCAGGAGTTCAATGAGCCATTGACGGCGGCCGAGTTGATGCTCGAACACCCACGACAAGTAGTCGTAGAGATACGCTCGAGTGTTGCTGGAAAAAAACCGATCCCATTACCAACTGACGAGAAACTCGATTTGAAGAAGGTTTATTGAATCATTTCTCAACTCAAAAATTTTAGATCCTATTTTATTATTTATTTATTTAAACTAGTCTCTTTAGATTTTAGATATTTTATTTTATGGATTTAATGTACTTTTTAAAACTTTAGGGCTCAATTATATGTGATAAAAATTTAAACTTAGTCACTTATTGGTCAAACTATAATGCCTTCCATCTCTTACTACATTTGGTTCTTTTAGTTTTAGAATTTTTTAATAGGTTGTTTTTCATGTTATAATTGCATTTAATTTAATGAGAAATGATAAATATATAAACTCTCTGAGTTAGGGGTCTTATTCTAGATTATTTTATCTATCATTTAGAATGAGATTCATAATGTTTCAAAAAAAAAAAAAGAGGTTCATAACATCAAAATCTATAAACTATTTAATCATTTATTCATATTCTTAACAAGGTCTATATGATGCTACCGATAAGAGGAGGCAAGCCAAGATCATTGTCATCGGAGGAAATCCGTCGTGTTCTCCTATGTGTCAACACGGCTTTACGATCGCCCTCTCTCTTCCTATCTTCTTCTAAGGTTCTTCCTTGGTTTGCAAGGACATGCAAAACAACGAATGCGACGATGACGGGAGCAGCCCGAGTCGAGATTAAGAAGGAAGATAATAATATGGAGAATGAAGGAGATGAAGTTAGCTGGGAAATGGAGATGTTGGAGGGGAGGCCAGAGTATTTAAGCAGACAATTATCAGGCAGAGGTTGGAAGCCAAATTTAGATACTATTAAGGAAAAGAAAATGGAGAAGAAATATTCTCATTGGTTGTTCAACTTTTGAAAGGCTCAAATATTATTAAAGTATATGTGCAAAAATATAGATGATATTGAATGTTTAAGAACATGCTTTTGTATTTGTAAAAAAGAAAAAAATTATAGTTGAAATATCATATGGTATCCACCTATTAAAA

mRNA sequence

ATTCATTACCATGGAGCTGTTCAACAAACAAACTCCTTCCCTCTATCCCCTCTTCTTATTTCATTCCTTCCTTTCTCCTCCCTCAACCTCACTTTGATAATTTCTCGATGGGCAACGTCACCTCCGTCTCTCGTGTCGGGAAAGTTGTTCTGTCTGACGGTTCTGTTCAGGAGTTCAATGAGCCATTGACGGCGGCCGAGTTGATGCTCGAACACCCACGACAAGTAGTCGTAGAGATACGCTCGAGTGTTGCTGGAAAAAAACCGATCCCATTACCAACTGACGAGAAACTCGATTTGAAGAAGGTCTATATGATGCTACCGATAAGAGGAGGCAAGCCAAGATCATTGTCATCGGAGGAAATCCGTCGTGTTCTCCTATGTGTCAACACGGCTTTACGATCGCCCTCTCTCTTCCTATCTTCTTCTAAGGTTCTTCCTTGGTTTGCAAGGACATGCAAAACAACGAATGCGACGATGACGGGAGCAGCCCGAGTCGAGATTAAGAAGGAAGATAATAATATGGAGAATGAAGGAGATGAAGTTAGCTGGGAAATGGAGATGTTGGAGGGGAGGCCAGAGTATTTAAGCAGACAATTATCAGGCAGAGGTTGGAAGCCAAATTTAGATACTATTAAGGAAAAGAAAATGGAGAAGAAATATTCTCATTGGTTGTTCAACTTTTGAAAGGCTCAAATATTATTAAAGTATATGTGCAAAAATATAGATGATATTGAATGTTTAAGAACATGCTTTTGTATTTGTAAAAAAGAAAAAAATTATAGTTGAAATATCATATGGTATCCACCTATTAAAA

Coding sequence (CDS)

ATGGGCAACGTCACCTCCGTCTCTCGTGTCGGGAAAGTTGTTCTGTCTGACGGTTCTGTTCAGGAGTTCAATGAGCCATTGACGGCGGCCGAGTTGATGCTCGAACACCCACGACAAGTAGTCGTAGAGATACGCTCGAGTGTTGCTGGAAAAAAACCGATCCCATTACCAACTGACGAGAAACTCGATTTGAAGAAGGTCTATATGATGCTACCGATAAGAGGAGGCAAGCCAAGATCATTGTCATCGGAGGAAATCCGTCGTGTTCTCCTATGTGTCAACACGGCTTTACGATCGCCCTCTCTCTTCCTATCTTCTTCTAAGGTTCTTCCTTGGTTTGCAAGGACATGCAAAACAACGAATGCGACGATGACGGGAGCAGCCCGAGTCGAGATTAAGAAGGAAGATAATAATATGGAGAATGAAGGAGATGAAGTTAGCTGGGAAATGGAGATGTTGGAGGGGAGGCCAGAGTATTTAAGCAGACAATTATCAGGCAGAGGTTGGAAGCCAAATTTAGATACTATTAAGGAAAAGAAAATGGAGAAGAAATATTCTCATTGGTTGTTCAACTTTTGA

Protein sequence

MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSSVAGKKPIPLPTDEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRSPSLFLSSSKVLPWFARTCKTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEMLEGRPEYLSRQLSGRGWKPNLDTIKEKKMEKKYSHWLFNF

Homology

[Close]

BLAST of Sed0015554 vs. NCBI nr
Match: XP_022152205.1 (uncharacterized protein LOC111019977 [Momordica charantia])

HSP 1 Score: 275.8 bits (704), Expect = 2.8e-70
Identity = 147/193 (76.17%), Postives = 157/193 (81.35%), Query Frame = 0


Query: 1   MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSSVAGKKPIPLPTDE 60
           MGN TS S  GKVVLSDGSVQE NE LTAAELMLEHPRQVVVEI S++AGK+P  LP DE
Sbjct: 1   MGNATSFSGAGKVVLSDGSVQELNEQLTAAELMLEHPRQVVVEICSTIAGKRPTSLPADE 60

Query: 61  KLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRSPSLFLSSSKVLPWFARTCKTT 120
           KLDLKKVY+MLPIRGGKP SLSSEEIRR+LLC N+ LR  SLF SSSKVLPWFAR C TT
Sbjct: 61  KLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSTLRLHSLFRSSSKVLPWFARVCTTT 120

Query: 121 NATMTGAARVEIKKEDNNMENEGDEVSWEMEM-LEGRPEYLSRQLSGRGWKPNLDTIKEK 180
            AT  G A V++KK D NME  G+E  WE EM  EGRPEYLSRQ SGRGWKP+LDTIKEK
Sbjct: 121 TATTIGTAGVKMKKGD-NMET-GEENRWETEMAAEGRPEYLSRQFSGRGWKPSLDTIKEK 180

Query: 181 KMEKKYSHWLFNF 193
           K EKK SHWLF F
Sbjct: 181 KFEKKISHWLFKF 191

[Close]

BLAST of Sed0015554 vs. NCBI nr
Match: XP_038899617.1 (uncharacterized protein LOC120086875 [Benincasa hispida])

HSP 1 Score: 274.2 bits (700), Expect = 8.3e-70
Identity = 146/194 (75.26%), Postives = 161/194 (82.99%), Query Frame = 0


Query: 1   MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEI-RSSVAGKKPIPLPTD 60
           MGNVT VS +G+VVLSDGS+Q+FNEP TAAELMLEHPRQVVVEI +S++  K+  PLP D
Sbjct: 1   MGNVTFVSGIGRVVLSDGSIQKFNEPFTAAELMLEHPRQVVVEICKSTIIRKRLTPLPAD 60

Query: 61  EKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRSPSLFLSSSKVLPWFARTCKT 120
           EKLD KKVYMMLPIRGGKP SLSSEEIRRVLLC N+ALRS SL LSSSKVLPWFAR   +
Sbjct: 61  EKLDSKKVYMMLPIRGGKPASLSSEEIRRVLLCANSALRSRSLLLSSSKVLPWFARAATS 120

Query: 121 TNATMTGAARVEIKKEDNNMENEGDEVSWEMEM-LEGRPEYLSRQLSGRGWKPNLDTIKE 180
              T T   +VEIKKED  ++ EG+E  WE EM  EGRPEYLSRQLSGRGWKP+LDTIKE
Sbjct: 121 ATITTTREVQVEIKKED-LVKIEGEEDRWETEMAAEGRPEYLSRQLSGRGWKPSLDTIKE 180

Query: 181 KKMEKKYSHWLFNF 193
           KK EKKYSHWLFNF
Sbjct: 181 KKFEKKYSHWLFNF 193

[Close]

BLAST of Sed0015554 vs. NCBI nr
Match: KAG6575773.1 (hypothetical protein SDJN03_26412, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 271.2 bits (692), Expect = 7.0e-69
Identity = 145/196 (73.98%), Postives = 158/196 (80.61%), Query Frame = 0


Query: 1   MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSS-VAGKKPIPLPTD 60
           MGNVTSVS VGKVVLS+GS+ EFNEPLT AELMLEHPR VVVE+RSS +A K+P PLP D
Sbjct: 1   MGNVTSVSGVGKVVLSNGSIHEFNEPLTVAELMLEHPRHVVVELRSSTIAEKRPTPLPAD 60

Query: 61  EKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRSPSLFLSSSKVLPWFARTCKT 120
            KLDLKKVYMMLPIRGGKP SLSSEEIRRV+LC N+ALRS SL LSSSKVLPW AR    
Sbjct: 61  LKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRSRSLLLSSSKVLPWLARARSA 120

Query: 121 TNATMTGAARVEIKKEDNNMENEGDEVSWEMEM---LEGRPEYLSRQLSGRGWKPNLDTI 180
           T  TMTGA  V++KKED      G+E+ WE EM    EGRPEYLSRQLSG+ WKP+LDTI
Sbjct: 121 TTPTMTGAVGVDVKKEDPT--TIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTI 180

Query: 181 KEKKMEKKYSHWLFNF 193
           KEKK EKK SHWLF F
Sbjct: 181 KEKKFEKKLSHWLFKF 194

[Close]

BLAST of Sed0015554 vs. NCBI nr
Match: XP_008451489.1 (PREDICTED: uncharacterized protein LOC103492763 [Cucumis melo])

HSP 1 Score: 271.2 bits (692), Expect = 7.0e-69
Identity = 147/197 (74.62%), Postives = 161/197 (81.73%), Query Frame = 0


Query: 1   MGNVTS-VSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEI-RSSVAGKKPIPLPT 60
           MGNVTS VS VGKVVLS+GS+QEFNEP T AELMLEHPRQVVVEI +S+V GK+P PLP 
Sbjct: 1   MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPA 60

Query: 61  DEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRSPSLFLSSSKVLPWFARTC- 120
           DEKL+  KVYMMLPIRGGKP SLSSE+IRRVLLC N+ALRS SL LSSSKVLPWFAR C 
Sbjct: 61  DEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALRSRSLLLSSSKVLPWFARACT 120

Query: 121 --KTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEMLEGRPEYLSRQLSGRGWKPNLDT 180
              T   T T   R EIKKE + ++ EG+EV W  E  EGRPEYLSRQLSGRGWKP+LDT
Sbjct: 121 ATTTVTTTTTREYRAEIKKELDVVKMEGEEVGW--ETAEGRPEYLSRQLSGRGWKPSLDT 180

Query: 181 IKEKKMEKKYSHWLFNF 193
           IKEKK+EKK SHWLFNF
Sbjct: 181 IKEKKIEKKLSHWLFNF 195

[Close]

BLAST of Sed0015554 vs. NCBI nr
Match: XP_022953412.1 (uncharacterized protein LOC111455974 [Cucurbita moschata])

HSP 1 Score: 268.9 bits (686), Expect = 3.5e-68
Identity = 144/196 (73.47%), Postives = 157/196 (80.10%), Query Frame = 0


Query: 1   MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSS-VAGKKPIPLPTD 60
           MGNVTSVS VGK+VLSDGS+ EFNEPLT AELMLEHPR VVVE+RSS V  K+P PLP D
Sbjct: 1   MGNVTSVSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPAD 60

Query: 61  EKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRSPSLFLSSSKVLPWFARTCKT 120
            KLDLKKVYMMLPIRGGKP SLSSEEIRRV+LC N+ALRS SL LSSSKVLPW AR    
Sbjct: 61  LKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRSRSLLLSSSKVLPWLARARSA 120

Query: 121 TNATMTGAARVEIKKEDNNMENEGDEVSWEMEM---LEGRPEYLSRQLSGRGWKPNLDTI 180
           T  T TGA  V++KK+D  M   G+E+ WE EM    EGRPEYLSRQLSG+ WKP+LDTI
Sbjct: 121 TTPTTTGAVGVDVKKKDLTM--IGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTI 180

Query: 181 KEKKMEKKYSHWLFNF 193
           KEKK EKK SHWLF F
Sbjct: 181 KEKKFEKKLSHWLFKF 194

[Close]

BLAST of Sed0015554 vs. ExPASy TrEMBL
Match: A0A6J1DD99 (uncharacterized protein LOC111019977 OS=Momordica charantia OX=3673 GN=LOC111019977 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.4e-70
Identity = 147/193 (76.17%), Postives = 157/193 (81.35%), Query Frame = 0


Query: 1   MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSSVAGKKPIPLPTDE 60
           MGN TS S  GKVVLSDGSVQE NE LTAAELMLEHPRQVVVEI S++AGK+P  LP DE
Sbjct: 1   MGNATSFSGAGKVVLSDGSVQELNEQLTAAELMLEHPRQVVVEICSTIAGKRPTSLPADE 60

Query: 61  KLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRSPSLFLSSSKVLPWFARTCKTT 120
           KLDLKKVY+MLPIRGGKP SLSSEEIRR+LLC N+ LR  SLF SSSKVLPWFAR C TT
Sbjct: 61  KLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSTLRLHSLFRSSSKVLPWFARVCTTT 120

Query: 121 NATMTGAARVEIKKEDNNMENEGDEVSWEMEM-LEGRPEYLSRQLSGRGWKPNLDTIKEK 180
            AT  G A V++KK D NME  G+E  WE EM  EGRPEYLSRQ SGRGWKP+LDTIKEK
Sbjct: 121 TATTIGTAGVKMKKGD-NMET-GEENRWETEMAAEGRPEYLSRQFSGRGWKPSLDTIKEK 180

Query: 181 KMEKKYSHWLFNF 193
           K EKK SHWLF F
Sbjct: 181 KFEKKISHWLFKF 191

[Close]

BLAST of Sed0015554 vs. ExPASy TrEMBL
Match: A0A1S3BSP6 (uncharacterized protein LOC103492763 OS=Cucumis melo OX=3656 GN=LOC103492763 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 3.4e-69
Identity = 147/197 (74.62%), Postives = 161/197 (81.73%), Query Frame = 0


Query: 1   MGNVTS-VSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEI-RSSVAGKKPIPLPT 60
           MGNVTS VS VGKVVLS+GS+QEFNEP T AELMLEHPRQVVVEI +S+V GK+P PLP 
Sbjct: 1   MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPA 60

Query: 61  DEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRSPSLFLSSSKVLPWFARTC- 120
           DEKL+  KVYMMLPIRGGKP SLSSE+IRRVLLC N+ALRS SL LSSSKVLPWFAR C 
Sbjct: 61  DEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALRSRSLLLSSSKVLPWFARACT 120

Query: 121 --KTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEMLEGRPEYLSRQLSGRGWKPNLDT 180
              T   T T   R EIKKE + ++ EG+EV W  E  EGRPEYLSRQLSGRGWKP+LDT
Sbjct: 121 ATTTVTTTTTREYRAEIKKELDVVKMEGEEVGW--ETAEGRPEYLSRQLSGRGWKPSLDT 180

Query: 181 IKEKKMEKKYSHWLFNF 193
           IKEKK+EKK SHWLFNF
Sbjct: 181 IKEKKIEKKLSHWLFNF 195

[Close]

BLAST of Sed0015554 vs. ExPASy TrEMBL
Match: A0A6J1GN59 (uncharacterized protein LOC111455974 OS=Cucurbita moschata OX=3662 GN=LOC111455974 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.7e-68
Identity = 144/196 (73.47%), Postives = 157/196 (80.10%), Query Frame = 0


Query: 1   MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSS-VAGKKPIPLPTD 60
           MGNVTSVS VGK+VLSDGS+ EFNEPLT AELMLEHPR VVVE+RSS V  K+P PLP D
Sbjct: 1   MGNVTSVSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPAD 60

Query: 61  EKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRSPSLFLSSSKVLPWFARTCKT 120
            KLDLKKVYMMLPIRGGKP SLSSEEIRRV+LC N+ALRS SL LSSSKVLPW AR    
Sbjct: 61  LKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRSRSLLLSSSKVLPWLARARSA 120

Query: 121 TNATMTGAARVEIKKEDNNMENEGDEVSWEMEM---LEGRPEYLSRQLSGRGWKPNLDTI 180
           T  T TGA  V++KK+D  M   G+E+ WE EM    EGRPEYLSRQLSG+ WKP+LDTI
Sbjct: 121 TTPTTTGAVGVDVKKKDLTM--IGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSLDTI 180

Query: 181 KEKKMEKKYSHWLFNF 193
           KEKK EKK SHWLF F
Sbjct: 181 KEKKFEKKLSHWLFKF 194

[Close]

BLAST of Sed0015554 vs. ExPASy TrEMBL
Match: A0A0A0K6C6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G407610 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.8e-68
Identity = 145/197 (73.60%), Postives = 161/197 (81.73%), Query Frame = 0


Query: 1   MGNVTS-VSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEI-RSSVAGKKPIPLPT 60
           MGNVTS VS VGKVVLS+GS+QEFNEP T AELMLEHPRQVVVEI +S+V GK+P PLP 
Sbjct: 1   MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPA 60

Query: 61  DEKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRSPSLFLSSSKVLPWFARTC- 120
           DEKL+  KVYMMLPIRGGKP SLSSE+IRRVLLC N+ALRS SL LSSSKVLPWFAR C 
Sbjct: 61  DEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALRSRSLLLSSSKVLPWFARACT 120

Query: 121 --KTTNATMTGAARVEIKKEDNNMENEGDEVSWEMEMLEGRPEYLSRQLSGRGWKPNLDT 180
              TT +T T   R + KKE + ++ EG+EV W  E +EGRPEYLSRQLSGRGWKP+LDT
Sbjct: 121 ATTTTASTTTREYRADTKKELDVVKMEGEEVEW--ETVEGRPEYLSRQLSGRGWKPSLDT 180

Query: 181 IKEKKMEKKYSHWLFNF 193
           IKEKK EKK SHWLF F
Sbjct: 181 IKEKKFEKKLSHWLFKF 195

[Close]

BLAST of Sed0015554 vs. ExPASy TrEMBL
Match: A0A6J1JQZ4 (uncharacterized protein LOC111488113 OS=Cucurbita maxima OX=3661 GN=LOC111488113 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.2e-66
Identity = 144/196 (73.47%), Postives = 155/196 (79.08%), Query Frame = 0


Query: 1   MGNVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSS-VAGKKPIPLPTD 60
           MGNVTSVS VGKVVLSDGS+ EFNEPLT AELMLEHPR VVVE+RSS VA K+P PLP D
Sbjct: 1   MGNVTSVSGVGKVVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSTVAEKRPTPLPAD 60

Query: 61  EKLDLKKVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRSPSLFLSSSKVLPWFARTCKT 120
            KLDLKKVYMMLPIRGGKP SLSSEEIR VLLC N+ALRS SL LSSSKVLPW AR    
Sbjct: 61  LKLDLKKVYMMLPIRGGKPMSLSSEEIRHVLLCANSALRSRSLLLSSSKVLPWLARARSA 120

Query: 121 TNATMTGAARVEIKKEDNNMENEGDEVSWEMEM---LEGRPEYLSRQLSGRGWKPNLDTI 180
           T    TGA  V++KK+D      G+E+ WE EM    EGRPEYLSRQLSG+ WKP+LDTI
Sbjct: 121 T----TGAVGVDVKKKDPT--TIGEEMRWETEMTMAAEGRPEYLSRQLSGKAWKPSLDTI 180

Query: 181 KEKKMEKKYSHWLFNF 193
           KEKK EKK SHWLF F
Sbjct: 181 KEKKFEKKLSHWLFKF 190

[Close]

BLAST of Sed0015554 vs. TAIR 10
Match: AT4G02090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 132 Blast hits to 132 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 117.9 bits (294), Expect = 9.2e-27
Identity = 85/209 (40.67%), Postives = 112/209 (53.59%), Query Frame = 0


Query: 1   MGNVTSVSRV-------GKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSS------ 60
           MGNV    ++       GKVVLSDG VQ   E  T AE+MLE+P+ VVVE   S      
Sbjct: 1   MGNVAGSRKLDAAGMAAGKVVLSDGRVQNLEEETTVAEIMLENPQHVVVEFDPSSISFNN 60

Query: 61  ---VAGKKPIPLPTDEKLDLKKVYMMLPIR--GGKPRS-----LSSEEIRRVLLCVNTAL 120
                 +K  PLP D+ L+  K+Y++LP +  GG+        L+SEE+R++L      +
Sbjct: 61  DAKTVKRKLAPLPADKTLEPGKIYLVLPAKRSGGRAAKSSSAVLTSEEMRKMLFSATAMV 120

Query: 121 RSPSLFLSSSKVLPWF-ARTCKTTN-ATMTGAARVEIKKEDNNMENEGDEVSWEMEMLEG 180
           RS   F     +LPWF  R+ K  N AT T  A   + + +  ME             E 
Sbjct: 121 RSS--FSYYEGILPWFTTRSYKNNNPATDTVVAATSVGRLEAEMEE------------ED 180

Query: 181 RPEYLSRQLSGRGWKPNLDTIKEKKMEKK 185
           RPE+LSRQLSGRGWKP+LD I+EKK +KK
Sbjct: 181 RPEFLSRQLSGRGWKPSLDPIREKKAKKK 195

[Close]

BLAST of Sed0015554 vs. TAIR 10
Match: AT3G03280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17350.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.1 bits (144), Expect = 2.3e-09
Identity = 55/179 (30.73%), Postives = 84/179 (46.93%), Query Frame = 0


Query: 3   NVTSVSRVGKVVLSDGSVQEFNEPLTAAELMLEHPRQVVVEIRSSVAGKKPIPLPTDEKL 62
           N TS S + KV+L DG V++ + P  AAELM+E P   +V+ +S   G+K IPL  D+ L
Sbjct: 10  NKTSSSPLAKVILPDGGVRDIHVPTKAAELMMEMPSYFLVDTKSVKVGRKFIPLAADDDL 69

Query: 63  DLK--KVYMMLPIRGGKPRSLSSEEIRRVLLCVNTALRSPSLFLSSSKVLPWFARTCKTT 122
           DL    VY+  P+      + +S+  R              L+L+  K         +T 
Sbjct: 70  DLGGCHVYVAFPMTRATSAANASDMAR--------------LYLTGKK---------RTK 129

Query: 123 NATMTGAARVEIKKEDN-NMENEGDEVSWEMEMLEGRPEYLSRQLSGRGWKPNLDTIKE 179
           N    G  RV  + EDN ++   G +++ E        E++ R    +  KP L+TI E
Sbjct: 130 NC---GHRRVSPENEDNDDVRLIGPKLNLEDIEEFSAAEFIHRISVSKSKKPQLETIAE 162

The following BLAST results are available for this feature:

BLAST of Sed0015554 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152205.1	2.8e-70	76.17	uncharacterized protein LOC111019977 [Momordica charantia]	[more]
XP_038899617.1	8.3e-70	75.26	uncharacterized protein LOC120086875 [Benincasa hispida]	[more]
KAG6575773.1	7.0e-69	73.98	hypothetical protein SDJN03_26412, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008451489.1	7.0e-69	74.62	PREDICTED: uncharacterized protein LOC103492763 [Cucumis melo]	[more]
XP_022953412.1	3.5e-68	73.47	uncharacterized protein LOC111455974 [Cucurbita moschata]	[more]

BLAST of Sed0015554 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0015554 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DD99	1.4e-70	76.17	uncharacterized protein LOC111019977 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A1S3BSP6	3.4e-69	74.62	uncharacterized protein LOC103492763 OS=Cucumis melo OX=3656 GN=LOC103492763 PE=...	[more]
A0A6J1GN59	1.7e-68	73.47	uncharacterized protein LOC111455974 OS=Cucurbita moschata OX=3662 GN=LOC1114559...	[more]
A0A0A0K6C6	3.8e-68	73.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G407610 PE=4 SV=1	[more]
A0A6J1JQZ4	1.2e-66	73.47	uncharacterized protein LOC111488113 OS=Cucurbita maxima OX=3661 GN=LOC111488113...	[more]

BLAST of Sed0015554 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02090.1	9.2e-27	40.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT3G03280.1	2.3e-09	30.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..178 e-value: 4.8E-28 score: 98.8
None	No IPR available	PANTHER	PTHR33052:SF101	AGAA.5	coord: 1..184
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 1..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015554.1	Sed0015554.1	mRNA