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Sed0015511 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGAGAAACGGGAAAAAAGAAAAACCCTAGACTTGTTTCTCAACTTCTCGTCTCATCATCAACGTTTGCTCACTGAACTTATTTTTTTACTCGAACTCATTTGGAGATACCAATCTCGCCGGTAGCTTCGGTACGTTTTCGATTCGATCCCACTTCGTTTTCTCCAAGTTTATTGCTTTTCAATTGCCTGTGTTTCTGTTCCAGCTTTTTTAGAGTCTGCTTTTACTTGGGTTCTTTATTTCTTGGGGGGGTTTTTATACAACATTTTTTTGGGGGGGTTGTTTTCTGAGAATGGTTTTGTTTTGAGGATTATGGTTTTCTTTTTCAAAGAGATTTGTTAATAAGAAGGGATAAGTTCAACTTATGGTGGTCACTTAGGTATTTCCTATTAAACCAAATGTTGTAAATCTGTTTTTTTATAGGAGGGATGTGAGCACTTTTCTCTCCATCAACTTGAATCAATCAAACACATAACATAAGAGTTGGGTTGAATTAAATTTAAGGAGGACCGAATAAATGGTTGATTGGGTATTTTCTGGTTTGGTTCAATTCGAAGTAAACCGTGTTCATCTTACAAGCAAATAATAATTTATTTTCTTAGATGCTGGCAAATGATAATTTATGTTCTAGTAGAACCAGTCTATAGTTGAAGTAATCTATCGTATACCAATTTTCCCCAACAAATGATGTCAAATAGAATGGGGTTACCCAATTGAAGAGGTACACCGGATCATCAGATTTAGGCCCCCCGTGGATTCTCTTGCAAAGTGCATAACCTATTTTCTCCACAAAACCTTGTTAGTGCCTCTTCTTGTTTTCTTCAGCATCACATTCTCACTCTATGTTAAAACCTGTTCCCAAGGGGTGACACACTGGTTAAAAATTTGGGCTTTGAAGGTATGCTTTCTTTCCAGGTTCGAGACTCACAGACAATTTCTCTTGCTACCTGGCCTAGAGACGGCATAGTTACCCTTGTTTAAAAAAAAAACTCTAGGTTAAAAACTGTATTTTTTTTTCCTCTATCGGTTTCTATAGGTTAAAGGTAACGTTTTTCCCCCTTCCCTTTACCAGCACTTGTCTCAACGTTTTCTTCTCTCTTTTTTTCATTCAATTTGAAACAAAGAAAAAGATTTGACTTCGTTTTTCATGTAGGAATTTAGCTTTTATTGCAGGAATTTAGCTTTACTATCATTGTGTTGTTTTGTTATTTGTTGGTGTAGAGATTTAATTAGTTGTAAGTATGAGCAACAAGGTTAATGCTGCTCAAAGTGTAGAAGGCTACAAACCCTCATCAGAGTTTGAGGAAGACAAAAGGACATTGCTTACTGATATTTCTTTGTCTGACTCTACAGAGCTCTGGCTTATTCAATGGCCTGCTAACCAAGTAAGATAATAAGATCTTATAAACTAATCTAGAAAAATAGAAATAACTACCTGTTATTTGGGCGAATTAAATTTAAAATGAAGAACATTCCATAAATGTTCCTCGTCCTCCTTTCATTATTGAAGTTTGTTGCAGCCATTGCGATGAATTTTGAACTTAAGAGGGACTCATTGTTTTTCTTCATTGGGTATTTTAGGCTCTCGAATTTGATGGACAGGAGTTTTCTCTCCAACTTCATTCAGATGGACATTTGGGCAGCTTTCAGGGTTCATCTGGTAATTATCATTTTATCAGTGATTTACTGTGAGGGACAATCTTACCTTATCATCCACTCTTCTTTACTCGGTTGAATTTATAATCTATTATCAGTTTTTCAAAGAACAGTTGGTGCGTGGTTTAAAGTATTTTTGTTTAAATGTGAATTGCATCTATTATGTTCATTTTCCTATCTACAACAATTCAATTTATTCTTGGTTTTATCTAAAGGAAAATCATATGATGTGGTCAGCTGTGTGGGTCAAGAACCTGAGGCTACTGTTTTTCTACCATCTTCATCAGACGCCAGAATAAGTAATTGCCCTTCTATCTGTTATAGAAAATTTACTCTATTCTAAATTTGTGCACGTGTTAGAATCGGTCTCATATTTCAGTTACAATCTCTCTCTCTCTCTCTCTCTCATTCTTTTTGTTATACTTGCCTTGACTTAATCTGCACCAGTCTGGCTCTTGAGTTTCAGAGTACCTGTATTCTTATATTCTAGAGGTTATGAGTTCAATACATGGTGACCATCTACCTATGAATTAACTTCTTGTAAGTTATATGTTGCAAACTTGCAAGCTTAAGCTCGAACAGTCATACAAATATTGATGTTGGTGTTGCTTTTAATATCATACCAATGACCTTAATTCCTAGACTTCTAGCTTCTTTCTCGCCCCCAATGGATTAAATTCTGTATGTTTTTTCACTTGGTACTTGCGTTGATAAGTGTTGTTTAGAACTTTGAATGTACTTCTATCGTCAACTTCTATTGTACATTATTGCTGGTTTTTCAACTACAAAGTCTTAACATTTTATTAGTTGTATGTAGTTTGGTAACATGTCGTTCTACTTTCTGTCATGTTTAAATGTGTTGGAATGCTGAGACCGATTTTGGTACTTTATGCATCTGTCTGTATTCAAGTCCAACATCGCATGCACTTTCAATGTACTTCTATCATCTTTCCCTTGACAAAATTTGTGTTCTATTTGTTCTTTTTCTCTTGTAGTTGGAAAGATTTCGCGGCGGGTATCTCTTGTGCATTTCCCAGAGCCTGTAGAACTTGAAATGACCACCCCTATGAAATCTGTATTTAAAAAATCTTCAACCACTTCATCTCGTCAGAATACTACATCCCAAGGTCCACACTCCAGCAGTGGACGAACAAACTCGGCACGAAGTAGTAAACCAAGAAGTTCAGTAGCTGACTTTGAGGGGCCGTCAAAGCAGTCAAGTATCAAGCAGGAACCAGAACCTTCCGAGTCCAGAGATTATCCGAAGGATTCAACGAAAAGTAAACGAAAACACAAGGCTAGTACATCGACCGACCACTCGACTCAAGATTCAGGACGTGGTCATAGTGCAGTAACTCTTTCAGGGTCCCCTGGGCGATCTAGTGAACGTAAAACAAAAAAGCATAAGAAATGAACGAGGTTGCTGCAAGGTGTATTCATTAGTTTTTGACAGGTTACTGAAGTATTGTCTGTACTCTTATTTCCCATTTTTCTTTGCTTGGATTAATTTGGGGCAGTTGTTTTACGTTATGGGAAGTTGTCTTTCTGACCAGTTAATTAATATATTGTTAATTTTGAATTACCAGAAAATATTTATTAATTATGTGAATTGTAAATTAACAGAAGACTTTTTTTTTTATGCAACAATATTGAGGGAGGGA CGAGAAACGGGAAAAAAGAAAAACCCTAGACTTGTTTCTCAACTTCTCGTCTCATCATCAACGTTTGCTCACTGAACTTATTTTTTTACTCGAACTCATTTGGAGATACCAATCTCGCCGGTAGCTTCGAGATTTAATTAGTTGTAAGTATGAGCAACAAGGTTAATGCTGCTCAAAGTGTAGAAGGCTACAAACCCTCATCAGAGTTTGAGGAAGACAAAAGGACATTGCTTACTGATATTTCTTTGTCTGACTCTACAGAGCTCTGGCTTATTCAATGGCCTGCTAACCAAGCTCTCGAATTTGATGGACAGGAGTTTTCTCTCCAACTTCATTCAGATGGACATTTGGGCAGCTTTCAGGGTTCATCTGGAAAATCATATGATGTGGTCAGCTGTGTGGGTCAAGAACCTGAGGCTACTGTTTTTCTACCATCTTCATCAGACGCCAGAATAATTGGAAAGATTTCGCGGCGGGTATCTCTTGTGCATTTCCCAGAGCCTGTAGAACTTGAAATGACCACCCCTATGAAATCTGTATTTAAAAAATCTTCAACCACTTCATCTCGTCAGAATACTACATCCCAAGGTCCACACTCCAGCAGTGGACGAACAAACTCGGCACGAAGTAGTAAACCAAGAAGTTCAGTAGCTGACTTTGAGGGGCCGTCAAAGCAGTCAAGTATCAAGCAGGAACCAGAACCTTCCGAGTCCAGAGATTATCCGAAGGATTCAACGAAAAGTAAACGAAAACACAAGGCTAGTACATCGACCGACCACTCGACTCAAGATTCAGGACGTGGTCATAGTGCAGTAACTCTTTCAGGGTCCCCTGGGCGATCTAGTGAACGTAAAACAAAAAAGCATAAGAAATGAACGAGGTTGCTGCAAGGTGTATTCATTAGTTTTTGACAGGTTACTGAAGTATTGTCTGTACTCTTATTTCCCATTTTTCTTTGCTTGGATTAATTTGGGGCAGTTGTTTTACGTTATGGGAAGTTGTCTTTCTGACCAGTTAATTAATATATTGTTAATTTTGAATTACCAGAAAATATTTATTAATTATGTGAATTGTAAATTAACAGAAGACTTTTTTTTTTATGCAACAATATTGAGGGAGGGA ATGAGCAACAAGGTTAATGCTGCTCAAAGTGTAGAAGGCTACAAACCCTCATCAGAGTTTGAGGAAGACAAAAGGACATTGCTTACTGATATTTCTTTGTCTGACTCTACAGAGCTCTGGCTTATTCAATGGCCTGCTAACCAAGCTCTCGAATTTGATGGACAGGAGTTTTCTCTCCAACTTCATTCAGATGGACATTTGGGCAGCTTTCAGGGTTCATCTGGAAAATCATATGATGTGGTCAGCTGTGTGGGTCAAGAACCTGAGGCTACTGTTTTTCTACCATCTTCATCAGACGCCAGAATAATTGGAAAGATTTCGCGGCGGGTATCTCTTGTGCATTTCCCAGAGCCTGTAGAACTTGAAATGACCACCCCTATGAAATCTGTATTTAAAAAATCTTCAACCACTTCATCTCGTCAGAATACTACATCCCAAGGTCCACACTCCAGCAGTGGACGAACAAACTCGGCACGAAGTAGTAAACCAAGAAGTTCAGTAGCTGACTTTGAGGGGCCGTCAAAGCAGTCAAGTATCAAGCAGGAACCAGAACCTTCCGAGTCCAGAGATTATCCGAAGGATTCAACGAAAAGTAAACGAAAACACAAGGCTAGTACATCGACCGACCACTCGACTCAAGATTCAGGACGTGGTCATAGTGCAGTAACTCTTTCAGGGTCCCCTGGGCGATCTAGTGAACGTAAAACAAAAAAGCATAAGAAATGA MSNKVNAAQSVEGYKPSSEFEEDKRTLLTDISLSDSTELWLIQWPANQALEFDGQEFSLQLHSDGHLGSFQGSSGKSYDVVSCVGQEPEATVFLPSSSDARIIGKISRRVSLVHFPEPVELEMTTPMKSVFKKSSTTSSRQNTTSQGPHSSSGRTNSARSSKPRSSVADFEGPSKQSSIKQEPEPSESRDYPKDSTKSKRKHKASTSTDHSTQDSGRGHSAVTLSGSPGRSSERKTKKHKK Homology
BLAST of Sed0015511 vs. NCBI nr
Match: XP_038896123.1 (mediator-associated protein 2 [Benincasa hispida]) HSP 1 Score: 321.6 bits (823), Expect = 5.7e-84 Identity = 182/245 (74.29%), Postives = 205/245 (83.67%), Query Frame = 0
BLAST of Sed0015511 vs. NCBI nr
Match: XP_004146046.1 (mediator-associated protein 2 [Cucumis sativus] >XP_031740697.1 mediator-associated protein 2 [Cucumis sativus] >KGN55103.1 hypothetical protein Csa_012926 [Cucumis sativus]) HSP 1 Score: 312.0 bits (798), Expect = 4.5e-81 Identity = 176/246 (71.54%), Postives = 208/246 (84.55%), Query Frame = 0
BLAST of Sed0015511 vs. NCBI nr
Match: XP_022981239.1 (LOW QUALITY PROTEIN: mediator-associated protein 2-like [Cucurbita maxima]) HSP 1 Score: 307.8 bits (787), Expect = 8.5e-80 Identity = 180/247 (72.87%), Postives = 197/247 (79.76%), Query Frame = 0
BLAST of Sed0015511 vs. NCBI nr
Match: XP_008463699.1 (PREDICTED: mediator-associated protein 2 [Cucumis melo] >KAA0066809.1 mediator-associated protein 2 [Cucumis melo var. makuwa] >TYK27956.1 mediator-associated protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 303.9 bits (777), Expect = 1.2e-78 Identity = 173/246 (70.33%), Postives = 205/246 (83.33%), Query Frame = 0
BLAST of Sed0015511 vs. NCBI nr
Match: XP_022139366.1 (mediator-associated protein 2 [Momordica charantia] >XP_022139367.1 mediator-associated protein 2 [Momordica charantia]) HSP 1 Score: 296.6 bits (758), Expect = 2.0e-76 Identity = 172/243 (70.78%), Postives = 197/243 (81.07%), Query Frame = 0
BLAST of Sed0015511 vs. ExPASy Swiss-Prot
Match: F4KF27 (Mediator-associated protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g64680 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.3e-09 Identity = 74/240 (30.83%), Postives = 107/240 (44.58%), Query Frame = 0
BLAST of Sed0015511 vs. ExPASy TrEMBL
Match: A0A0A0L047 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G629490 PE=4 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 2.2e-81 Identity = 176/246 (71.54%), Postives = 208/246 (84.55%), Query Frame = 0
BLAST of Sed0015511 vs. ExPASy TrEMBL
Match: A0A6J1J1C8 (LOW QUALITY PROTEIN: mediator-associated protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111480436 PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 4.1e-80 Identity = 180/247 (72.87%), Postives = 197/247 (79.76%), Query Frame = 0
BLAST of Sed0015511 vs. ExPASy TrEMBL
Match: A0A5A7VNG7 (Mediator-associated protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001600 PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 5.9e-79 Identity = 173/246 (70.33%), Postives = 205/246 (83.33%), Query Frame = 0
BLAST of Sed0015511 vs. ExPASy TrEMBL
Match: A0A1S3CLF4 (mediator-associated protein 2 OS=Cucumis melo OX=3656 GN=LOC103501782 PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 5.9e-79 Identity = 173/246 (70.33%), Postives = 205/246 (83.33%), Query Frame = 0
BLAST of Sed0015511 vs. ExPASy TrEMBL
Match: A0A6J1CDR9 (mediator-associated protein 2 OS=Momordica charantia OX=3673 GN=LOC111010319 PE=4 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 9.5e-77 Identity = 172/243 (70.78%), Postives = 197/243 (81.07%), Query Frame = 0
BLAST of Sed0015511 vs. TAIR 10
Match: AT5G64680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 114 Blast hits to 110 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). ) HSP 1 Score: 72.4 bits (176), Expect = 5.6e-13 Identity = 74/232 (31.90%), Postives = 107/232 (46.12%), Query Frame = 0
BLAST of Sed0015511 vs. TAIR 10
Match: AT5G64680.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 72.4 bits (176), Expect = 5.6e-13 Identity = 74/232 (31.90%), Postives = 107/232 (46.12%), Query Frame = 0
BLAST of Sed0015511 vs. TAIR 10
Match: AT5G64680.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 53 Blast hits to 53 proteins in 20 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 65.1 bits (157), Expect = 8.9e-11 Identity = 74/240 (30.83%), Postives = 107/240 (44.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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