Sed0015508 (gene) Chayote v1

Overview


Name	Sed0015508
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein MIS12 homolog
Location	LG08: 1913281 .. 1916711 (-)
RNA-Seq Expression	Sed0015508
Synteny	Sed0015508

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTGCGTGTAGACTATAAGACCGCTCCAAGTCCCCGTCAATCACCACTACCATTTTGGCGGCAAAATCCTCCATTTCTGCAAAAGCTCGAAACTCCCATTTATCTATCGATCCAAGTTTCTTCTCTACTTTTTCTCTGGCAAAGAAGCAAATCAAGGAAGTTTTTGATGGAAGGAAGTAATGGCGAGGCTGTATTCGATTCACTCAATCTGAATCCACAGCTCTTCATCAACGAAGCTCTCAATTTCGTTGACGATTTGGTTGATGGCGCTTTCGATTACTATCAATCGTATGCTCGCATCTCTTCAATTTAGGGTTTCACTCTTGTTTTCTTAATTCTAATTCTTTTCCCCTTCAGTCAAGCATCAGCCGATCTGAAGACCGAGGGCTCGAATCGATCTCAGGATCTCATCCTGGTAAGGTTTTAGTATATTAATTGGCATTTTTGTTAGATTCCAAGTCGTTTGGATGAGGAGTTAGCTCGAGGAGTTATTTTGAGTAGTTAAAATTTAAAACATTAATATTTTTGTAATAGCACATTTGAATGTAGATTTTTATGCAGGAGTGAAGCCAAAATCTCGTTTGGATGTGATTTATTTTTGTAGAGGGGAGTATTTTGAGCCATTAAAAATGAATTATTATAAATGAGTGGTTAGAAATGAAGAGTTATTTTGAGTAGTTAGAAATGAATGATTAGAAATGAGTAATTATTTTTAGTAGTGAGAAATGAAGAATTATTTTGAAAAGCTATAATAGCTTGTTTGGATGTGATTTTTTGAGGAGTAGTTCCTAATTGTTCAATCTAAATCCTCCTTAAATTTGACAAACAAACACCCCCTTTAGGTTTTGGAAATTGGTTATTTACCTCATTCTTGTAGGGAATTTCGCGCGTTCGATCGTTGGTTCAATCGGGTCTGGATAAGCGGCTGGCGATGTGGGAGAAGTACTGTCTCAACAACTGCTTTTCAGTTCCTGAAGGTTTTTCTTTACCCTCATATGTAGGTTCTTCGACTCTGTCCGTGTTGTTCTATTGTTTTTGTTTCTGTAGCTGAATTAGTTTCCCTTTCTGTTTGAATCATTTCATAGATGATTAACTGAGTGTGTAAAATGGCTGCTTGCTTTTGCACTTATGTATGACTTGAATGCTTCCTCAATTTTTTGGTACTGAGATGAACAAATTTTGGAAGTATTTTTTGGAAAAAAAGACCCTATTACTGTTGCATAAGCAAGTTTCGATCCTTTTCGATACATATTTTTCGCTACTTTCACAAGTTTCCATATTCTCTGACCTGAGAGCTTCGTCATTTTGTTTGCTATAACTCGGCACGGTTTGGTTGACACTAGGAACATGGTTGTGTCTGTGACTGTAAAAGTTTCTTTTTAACTCTAGAAGGAATATAAGCAAATGTCTGCAGCAAACATCTGTCAACATTAACAATTATAGAAGTGACCGAGTGGTCAAGAGAGGCTTGGAGAACTAAGAGGTGATGGGTTAAATCCATGGTGCCCATCCATCTAGTAGTTAATTTTCGCGAGAAAAGTCGAGGTGCGTATAAGCTGGCCTAAATACTCATGGATATCAAAAAAAAATTGTCATCGTTGCATCATGTTTTTCCTTTTTTAATAGTGTCTGAAGTCTAACCTTTGTGAAGTACAATTTGACTTCTTCCATTTTACATCAATATAGTTACTTACTTGGAGTTGACAGTGTCTATCTGTTTTATTGGAAGCTTCGGTATCTTATTGTCAATTTACTAAATTATCAATGGTTCTATATCTTGTTTGAGAACATTTGAGCTATGTTTAATTGTGTCTATCTTACTACTTTTTTCTTCTTTCTAAAGTGACAAACATATTTCTAATTCAGATCTAAATATTTTCTTTAAATTGTCTTAGGATGAACCACCTGCTGACACTTCAATAAGTCATGATGTGGATCTCGATACAGAGTTGGATTCTTTGAGGAATAAGCTCTCTGAGGTATTGAGTGTATCGTATGTTTATTACGGATGTTTCTTCGTATTATTTTTCATATTGGAAACATACTTTTCAGGTTCGAAAAGAGAATGTTGTATTGAACCAAGAACTCCAAGCTTTAGAAAGGCAAACTGCCTCCAGTAATTCCCAAGTTAATCATTTCAATGAAGCATTACAATTATATGAGCAAAATTCTGTGAATGAGATGTTCCAGGGTAATTAAGTTGTGCTTAAATGAATTGTTTCTTTCTGCACTGTTGGGATTACATTCACGATTTCTTTTCTGTTTTTTTTTCTTCTTATAATGGAGTTTATAGTCATAGACAAAGTCAACTTGGAAAACTAACACTTCTGTAAAGACCAACTTTCCTCCAATAGGTCGTTTGCTCTGGATTTCTCATTGTGCTTTGTTAAGACAGAAAACAACAATCAAAGAATAAAAGAACGAGTGAAAATAATCTTCATTAGTATGAAAGTCATGAAGGCCTGTGTCTAAAGTGAACAATATTATACCAATGAGTAGATCTATCTAGGAGATTTTCGTCCCAACATGCTTCATACTAACACATCCAAATGATATTTTCGTGAACATCTGCAGAATCACGTCATTCTGGTTTTGATTTAATCAATTTTACATTACTAAGAATTGAACGAGTTGGTATTTCTTTTTGTCTCCCATTTTCTGGTGATAATTCCATAAAAGAGGAACTCTTAATGCAAATTCTCTTGCTATTTTCATTTTGAACAAAATTTATTCATAAGCATAAAAATTCACCAAAATTCTAACGGTTAGCAGGTAAAAGCTGTTCATGATTTTAGGAATCAAAAGTCTAACATTTATCAAATCCTTGCAGAAATGATGGGGACTGCATCGGAGTTGCGAGCGAAAATAGGAAAACTGAAGAAAAGGAGGATGGAGGAATCGAAGCTCACTAAAGTAGAGAAAGTTGATACCACCGGAGACTTCTCTCACCATCACAAGGGTAGGATTTTCAAGATACTTCACACCTCAATCAAGCTGGTTTTAGCCTGGAAAAGGTGAATCTCATATCATCATCTCACATGCTCTTTAATGCTTGTTTCTGTTCTTCAGGTTTCTCGAATGCTAAGCTGGTTGACATTCAAGAACTTTTAGCTGATCTCAAGACCCTTTGAACTTATTTCATTCTGACATCAACCTGTAAAGATCTCAATTCCTTTAAACATTTTAGAAGGGACAAATTAGGTAATTTCTTAATAGGTTATTTGGGTGAGAGGGATGAGAGAGCCTCTTGGGGTATAAATATTGTAATGAGGTTTGAGGACTTGGAGGAGAGGTGCTCAATACTCATGAATTCACCGGTTAGTTTGTTGTTATCCTTTATCATTTTGTCTTGTTTTCTTTATCAGTGTTTGTAGTAAAGTAAATGCTGCATTATGAATGTTATATGAAATATATTGAGGTTTCTACTGTTA

mRNA sequence

CCTGCGTGTAGACTATAAGACCGCTCCAAGTCCCCGTCAATCACCACTACCATTTTGGCGGCAAAATCCTCCATTTCTGCAAAAGCTCGAAACTCCCATTTATCTATCGATCCAAGTTTCTTCTCTACTTTTTCTCTGGCAAAGAAGCAAATCAAGGAAGTTTTTGATGGAAGGAAGTAATGGCGAGGCTGTATTCGATTCACTCAATCTGAATCCACAGCTCTTCATCAACGAAGCTCTCAATTTCGTTGACGATTTGGTTGATGGCGCTTTCGATTACTATCAATCTCAAGCATCAGCCGATCTGAAGACCGAGGGCTCGAATCGATCTCAGGATCTCATCCTGGGAATTTCGCGCGTTCGATCGTTGGTTCAATCGGGTCTGGATAAGCGGCTGGCGATGTGGGAGAAGTACTGTCTCAACAACTGCTTTTCAGTTCCTGAAGGTTTTTCTTTACCCTCATATGATGAACCACCTGCTGACACTTCAATAAGTCATGATGTGGATCTCGATACAGAGTTGGATTCTTTGAGGAATAAGCTCTCTGAGGTTCGAAAAGAGAATGTTGTATTGAACCAAGAACTCCAAGCTTTAGAAAGGCAAACTGCCTCCAGTAATTCCCAAGTTAATCATTTCAATGAAGCATTACAATTATATGAGCAAAATTCTGTGAATGAGATGTTCCAGGAAATGATGGGGACTGCATCGGAGTTGCGAGCGAAAATAGGAAAACTGAAGAAAAGGAGGATGGAGGAATCGAAGCTCACTAAAGTAGAGAAAGTTGATACCACCGGAGACTTCTCTCACCATCACAAGGGTTTCTCGAATGCTAAGCTGGTTGACATTCAAGAACTTTTAGCTGATCTCAAGACCCTTTGAACTTATTTCATTCTGACATCAACCTGTAAAGATCTCAATTCCTTTAAACATTTTAGAAGGGACAAATTAGGTAATTTCTTAATAGGTTATTTGGGTGAGAGGGATGAGAGAGCCTCTTGGGGTATAAATATTGTAATGAGGTTTGAGGACTTGGAGGAGAGGTGCTCAATACTCATGAATTCACCGGTTAGTTTGTTGTTATCCTTTATCATTTTGTCTTGTTTTCTTTATCAGTGTTTGTAGTAAAGTAAATGCTGCATTATGAATGTTATATGAAATATATTGAGGTTTCTACTGTTA

Coding sequence (CDS)

ATGGAAGGAAGTAATGGCGAGGCTGTATTCGATTCACTCAATCTGAATCCACAGCTCTTCATCAACGAAGCTCTCAATTTCGTTGACGATTTGGTTGATGGCGCTTTCGATTACTATCAATCTCAAGCATCAGCCGATCTGAAGACCGAGGGCTCGAATCGATCTCAGGATCTCATCCTGGGAATTTCGCGCGTTCGATCGTTGGTTCAATCGGGTCTGGATAAGCGGCTGGCGATGTGGGAGAAGTACTGTCTCAACAACTGCTTTTCAGTTCCTGAAGGTTTTTCTTTACCCTCATATGATGAACCACCTGCTGACACTTCAATAAGTCATGATGTGGATCTCGATACAGAGTTGGATTCTTTGAGGAATAAGCTCTCTGAGGTTCGAAAAGAGAATGTTGTATTGAACCAAGAACTCCAAGCTTTAGAAAGGCAAACTGCCTCCAGTAATTCCCAAGTTAATCATTTCAATGAAGCATTACAATTATATGAGCAAAATTCTGTGAATGAGATGTTCCAGGAAATGATGGGGACTGCATCGGAGTTGCGAGCGAAAATAGGAAAACTGAAGAAAAGGAGGATGGAGGAATCGAAGCTCACTAAAGTAGAGAAAGTTGATACCACCGGAGACTTCTCTCACCATCACAAGGGTTTCTCGAATGCTAAGCTGGTTGACATTCAAGAACTTTTAGCTGATCTCAAGACCCTTTGA

Protein sequence

MEGSNGEAVFDSLNLNPQLFINEALNFVDDLVDGAFDYYQSQASADLKTEGSNRSQDLILGISRVRSLVQSGLDKRLAMWEKYCLNNCFSVPEGFSLPSYDEPPADTSISHDVDLDTELDSLRNKLSEVRKENVVLNQELQALERQTASSNSQVNHFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEESKLTKVEKVDTTGDFSHHHKGFSNAKLVDIQELLADLKTL

Homology

[Close]

BLAST of Sed0015508 vs. NCBI nr
Match: KAG6589575.1 (Protein MIS12-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 399.1 bits (1024), Expect = 2.8e-107
Identity = 211/241 (87.55%), Postives = 219/241 (90.87%), Query Frame = 0


Query: 1   MEGSNGEAVFDSLNLNPQLFINEALNFVDDLVDGAFDYYQSQASADLKTEGSNRSQDLIL 60
           MEGS GE VFDSLNLNPQLFINEALN VDDLVD AFD+YQ+QASA LKTEGS+RSQDLIL
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60

Query: 61  GISRVRSLVQSGLDKRLAMWEKYCLNNCFSVPEGFSLPSYDEPPADTSIS----HDVDLD 120
           GISRVR+ VQSGLDKRLAMWEKYCLN+CFSVPEGFSLPS DE P  TS+S    +DVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDSLRNKLSEVRKENVVLNQELQALERQTASSNSQVNHFNEALQLYEQNSVNEMFQEM 180
           TELD LRNKLSEVRKENVVLNQELQALERQTASSNSQVN FNEALQLYEQNSVNEMFQEM
Sbjct: 121 TELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQEM 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKVDTTGDFSHHHKGFSNAKLVDIQELLADLKT 238
           MGTASELRAKIGKLKKRRMEESKLTKVEK+ T GD SHHHKGFSNAKL DIQE LADLK 
Sbjct: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLKA 240

[Close]

BLAST of Sed0015508 vs. NCBI nr
Match: XP_023515499.1 (protein MIS12 homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 398.7 bits (1023), Expect = 3.6e-107
Identity = 211/241 (87.55%), Postives = 219/241 (90.87%), Query Frame = 0


Query: 1   MEGSNGEAVFDSLNLNPQLFINEALNFVDDLVDGAFDYYQSQASADLKTEGSNRSQDLIL 60
           MEGS GE VFDSLNLNPQLFINEALN VDDLVD AFD+YQ+QASA LKTEGS+RSQDL L
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLSL 60

Query: 61  GISRVRSLVQSGLDKRLAMWEKYCLNNCFSVPEGFSLPSYDEPPADTSIS----HDVDLD 120
           GISRVR+ VQSGLDKRLAMWEKYCLN+CFSVPEGFSLPS DE P  TS+S    +DVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDSLRNKLSEVRKENVVLNQELQALERQTASSNSQVNHFNEALQLYEQNSVNEMFQEM 180
           TELD LRNKLSEVRKENVVLNQELQALERQTASSNSQVN FNEALQLYEQNSVNEMFQEM
Sbjct: 121 TELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQEM 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKVDTTGDFSHHHKGFSNAKLVDIQELLADLKT 238
           MGTASELRAKIGKLKKRRMEESKLTKVEK+ T GD SHHHKGFSNAKL DIQE LADLKT
Sbjct: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLKT 240

[Close]

BLAST of Sed0015508 vs. NCBI nr
Match: KAG7023263.1 (Protein MIS12-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 395.6 bits (1015), Expect = 3.0e-106
Identity = 209/241 (86.72%), Postives = 218/241 (90.46%), Query Frame = 0


Query: 1   MEGSNGEAVFDSLNLNPQLFINEALNFVDDLVDGAFDYYQSQASADLKTEGSNRSQDLIL 60
           MEGS GE VFDSLNLNPQLFINEALN VDDLVD AFD+YQ+QASA LKTEGS+RSQDLIL
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60

Query: 61  GISRVRSLVQSGLDKRLAMWEKYCLNNCFSVPEGFSLPSYDEPPADTSIS----HDVDLD 120
           GISRVR+ VQSGLDKRLAMWEKYCLN+CFSVPEGFSLPS DE P  TS+S    +DVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDSLRNKLSEVRKENVVLNQELQALERQTASSNSQVNHFNEALQLYEQNSVNEMFQEM 180
           TELD LRNKLSEVRKENVVLNQELQALERQ ASSNSQVN FNEALQLYE+NSVNEMFQEM
Sbjct: 121 TELDFLRNKLSEVRKENVVLNQELQALERQAASSNSQVNRFNEALQLYERNSVNEMFQEM 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKVDTTGDFSHHHKGFSNAKLVDIQELLADLKT 238
           MGTASELRAKIGKLKKRRMEESKLTKVEK+ T GD SHHHKGFSNAKL DIQE LADLK 
Sbjct: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLKA 240

[Close]

BLAST of Sed0015508 vs. NCBI nr
Match: XP_022921372.1 (protein MIS12 homolog [Cucurbita moschata])

HSP 1 Score: 394.4 bits (1012), Expect = 6.8e-106
Identity = 208/241 (86.31%), Postives = 218/241 (90.46%), Query Frame = 0


Query: 1   MEGSNGEAVFDSLNLNPQLFINEALNFVDDLVDGAFDYYQSQASADLKTEGSNRSQDLIL 60
           MEGS GE VFDSLNLNPQLFINEALN VDDLVD AFD+YQ+QASA LKTEGS+RSQDLIL
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60

Query: 61  GISRVRSLVQSGLDKRLAMWEKYCLNNCFSVPEGFSLPSYDEPPADTSIS----HDVDLD 120
           GISRVR+ VQSGLDKRLAMWEKYCLN+CFSVPEGFSLPS DE P  TS+S    +DVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDSLRNKLSEVRKENVVLNQELQALERQTASSNSQVNHFNEALQLYEQNSVNEMFQEM 180
           TELD LRNKLSEVRKEN+VLNQELQALERQ ASSNSQVN FNEALQLYE+NSVNEMFQEM
Sbjct: 121 TELDFLRNKLSEVRKENIVLNQELQALERQAASSNSQVNRFNEALQLYERNSVNEMFQEM 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKVDTTGDFSHHHKGFSNAKLVDIQELLADLKT 238
           MGTASELRAKIGKLKKRRMEESKLTKVEK+ T GD SHHHKGFSNAKL DIQE LADLK 
Sbjct: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDASHHHKGFSNAKLDDIQEFLADLKA 240

[Close]

BLAST of Sed0015508 vs. NCBI nr
Match: XP_023515498.1 (protein MIS12 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 394.0 bits (1011), Expect = 8.9e-106
Identity = 211/242 (87.19%), Postives = 219/242 (90.50%), Query Frame = 0


Query: 1   MEGSNGEAVFDSLNLNPQLFINEALNFVDDLVDGAFDYYQSQASADLKTEGSNRSQDLIL 60
           MEGS GE VFDSLNLNPQLFINEALN VDDLVD AFD+YQ+QASA LKTEGS+RSQDL L
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLSL 60

Query: 61  GISRVRSLVQSGLDKRLAMWEKYCLNNCFSVPEGFSLPSYDEPPADTSIS----HDVDLD 120
           GISRVR+ VQSGLDKRLAMWEKYCLN+CFSVPEGFSLPS DE P  TS+S    +DVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDSLRNKLSEVRKENVVLNQELQALERQTASSNSQVNHFNEALQLYEQNSVNEMFQ-E 180
           TELD LRNKLSEVRKENVVLNQELQALERQTASSNSQVN FNEALQLYEQNSVNEMFQ E
Sbjct: 121 TELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQAE 180

Query: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKVDTTGDFSHHHKGFSNAKLVDIQELLADLK 238
           MMGTASELRAKIGKLKKRRMEESKLTKVEK+ T GD SHHHKGFSNAKL DIQE LADLK
Sbjct: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLK 240

[Close]

BLAST of Sed0015508 vs. ExPASy Swiss-Prot
Match: Q2V0Z5 (Protein MIS12 homolog OS=Arabidopsis thaliana OX=3702 GN=MIS12 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 8.5e-51
Identity = 118/244 (48.36%), Postives = 166/244 (68.03%), Query Frame = 0


Query: 1   MEGSNGEAVFDSLNLNPQLFINEALNFVDDLVDGAFDYYQSQASADLKTEGSN--RSQDL 60
           MEGS  EAVFDS+NLNPQ+FINEA+N V+D VD AFD+Y   AS  LK +GS+  +SQ L
Sbjct: 1   MEGSKSEAVFDSMNLNPQIFINEAINSVEDYVDQAFDFYARDASKSLKIKGSDKQKSQAL 60

Query: 61  ILGISRVRSLVQSGLDKRLAMWEKYCLNNCFSVPEGFSLPSYDEPPA-DTSISHDVDLDT 120
             GI+RVR L+ S +D RL +WE Y L  CF+VP+GF LP  +E  +      +D++LD 
Sbjct: 61  SNGIARVRGLLLSVIDNRLKLWESYSLRFCFAVPDGFVLPKSEESSSVHQDGLYDLELDA 120

Query: 121 ELDSLRNKLSEVRKENVVLNQELQALERQTASSNSQVNHFNEALQLYEQNSVNEMFQEMM 180
           ELDSLR+KL+ V K +V L+ ELQALER + S    +   NEAL+LY+++S++E+F+EM 
Sbjct: 121 ELDSLRDKLNVVGKRSVELDSELQALERSSVSRERSLRLVNEALELYDESSMDEIFKEMT 180

Query: 181 GTASELRAKIGKLKKRRMEESKLTKVEKVDTTGDFSHHHKGFS----NAKLVDIQELLAD 238
             ASELRA + +LK RRM+ S+  KV+++       +H K FS    + KL D+++  A+
Sbjct: 181 KMASELRASVERLKTRRMKASESAKVKRL------KNHGKEFSAMTFDGKLEDLEKFQAE 238

[Close]

BLAST of Sed0015508 vs. ExPASy TrEMBL
Match: A0A6J1E0A1 (protein MIS12 homolog OS=Cucurbita moschata OX=3662 GN=LOC111429660 PE=3 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.3e-106
Identity = 208/241 (86.31%), Postives = 218/241 (90.46%), Query Frame = 0


Query: 1   MEGSNGEAVFDSLNLNPQLFINEALNFVDDLVDGAFDYYQSQASADLKTEGSNRSQDLIL 60
           MEGS GE VFDSLNLNPQLFINEALN VDDLVD AFD+YQ+QASA LKTEGS+RSQDLIL
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60

Query: 61  GISRVRSLVQSGLDKRLAMWEKYCLNNCFSVPEGFSLPSYDEPPADTSIS----HDVDLD 120
           GISRVR+ VQSGLDKRLAMWEKYCLN+CFSVPEGFSLPS DE P  TS+S    +DVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDSLRNKLSEVRKENVVLNQELQALERQTASSNSQVNHFNEALQLYEQNSVNEMFQEM 180
           TELD LRNKLSEVRKEN+VLNQELQALERQ ASSNSQVN FNEALQLYE+NSVNEMFQEM
Sbjct: 121 TELDFLRNKLSEVRKENIVLNQELQALERQAASSNSQVNRFNEALQLYERNSVNEMFQEM 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKVDTTGDFSHHHKGFSNAKLVDIQELLADLKT 238
           MGTASELRAKIGKLKKRRMEESKLTKVEK+ T GD SHHHKGFSNAKL DIQE LADLK 
Sbjct: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDASHHHKGFSNAKLDDIQEFLADLKA 240

[Close]

BLAST of Sed0015508 vs. ExPASy TrEMBL
Match: A0A6J1JME3 (protein MIS12 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 7.3e-106
Identity = 208/241 (86.31%), Postives = 217/241 (90.04%), Query Frame = 0


Query: 1   MEGSNGEAVFDSLNLNPQLFINEALNFVDDLVDGAFDYYQSQASADLKTEGSNRSQDLIL 60
           MEGS GE VFDSLNLNPQLFINEALN VDDLVD AFD+YQ+QASA LKTEGS+RSQDLIL
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60

Query: 61  GISRVRSLVQSGLDKRLAMWEKYCLNNCFSVPEGFSLPSYDEPPADTSIS----HDVDLD 120
           GISRVR+ VQSGLDKRLAMWEKYCLN+CFSVPEGFSLPS DE P  TS+S    +DVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDSLRNKLSEVRKENVVLNQELQALERQTASSNSQVNHFNEALQLYEQNSVNEMFQEM 180
           TELD LR  LSEVRKEN+VLNQELQALERQTASSNSQVN FNEALQLYEQNSVNEMFQEM
Sbjct: 121 TELDFLRKNLSEVRKENIVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQEM 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKVDTTGDFSHHHKGFSNAKLVDIQELLADLKT 238
           MGTASELRAKIGKLKKRRMEESKLTKVEK+ T  D SHHHKGFSNAKL DIQE LADLKT
Sbjct: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNRDISHHHKGFSNAKLDDIQEFLADLKT 240

[Close]

BLAST of Sed0015508 vs. ExPASy TrEMBL
Match: A0A6J1JD43 (protein MIS12 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=3 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.8e-104
Identity = 208/242 (85.95%), Postives = 217/242 (89.67%), Query Frame = 0


Query: 1   MEGSNGEAVFDSLNLNPQLFINEALNFVDDLVDGAFDYYQSQASADLKTEGSNRSQDLIL 60
           MEGS GE VFDSLNLNPQLFINEALN VDDLVD AFD+YQ+QASA LKTEGS+RSQDLIL
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60

Query: 61  GISRVRSLVQSGLDKRLAMWEKYCLNNCFSVPEGFSLPSYDEPPADTSIS----HDVDLD 120
           GISRVR+ VQSGLDKRLAMWEKYCLN+CFSVPEGFSLPS DE P  TS+S    +DVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDSLRNKLSEVRKENVVLNQELQALERQTASSNSQVNHFNEALQLYEQNSVNEMFQ-E 180
           TELD LR  LSEVRKEN+VLNQELQALERQTASSNSQVN FNEALQLYEQNSVNEMFQ E
Sbjct: 121 TELDFLRKNLSEVRKENIVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQAE 180

Query: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKVDTTGDFSHHHKGFSNAKLVDIQELLADLK 238
           MMGTASELRAKIGKLKKRRMEESKLTKVEK+ T  D SHHHKGFSNAKL DIQE LADLK
Sbjct: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNRDISHHHKGFSNAKLDDIQEFLADLK 240

[Close]

BLAST of Sed0015508 vs. ExPASy TrEMBL
Match: A0A6J1C2Q6 (protein MIS12 homolog OS=Momordica charantia OX=3673 GN=LOC111006900 PE=3 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 5.2e-104
Identity = 204/241 (84.65%), Postives = 217/241 (90.04%), Query Frame = 0


Query: 1   MEGSNGEAVFDSLNLNPQLFINEALNFVDDLVDGAFDYYQSQASADLKTEGSNRSQDLIL 60
           MEGS GEAVFDSLNLNPQLFINEALN VDDLVD AFD+YQ QASA LKTEG ++SQDLI+
Sbjct: 1   MEGSKGEAVFDSLNLNPQLFINEALNLVDDLVDDAFDFYQLQASATLKTEGVDKSQDLIM 60

Query: 61  GISRVRSLVQSGLDKRLAMWEKYCLNNCFSVPEGFSLPSYDEPPADTSISH----DVDLD 120
           GISRVRS V S LDKRLAMWEKYCLN+CF+VPEGFSLPS DE PADTSISH    DV LD
Sbjct: 61  GISRVRSFVHSVLDKRLAMWEKYCLNHCFAVPEGFSLPSNDESPADTSISHDCLYDVGLD 120

Query: 121 TELDSLRNKLSEVRKENVVLNQELQALERQTASSNSQVNHFNEALQLYEQNSVNEMFQEM 180
           TELDSLRN+LSEVR+ENVVLNQELQALERQTASSNSQ+NHFNEAL+LYE+ SVNE FQE+
Sbjct: 121 TELDSLRNRLSEVREENVVLNQELQALERQTASSNSQINHFNEALELYEETSVNERFQEV 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKVDTTGDFSHHHKGFSNAKLVDIQELLADLKT 238
           M TASELRAKIGKLKKRR+EESKLTKVEKV T GD SHHHKGFSNAKL DIQE LADLKT
Sbjct: 181 MNTASELRAKIGKLKKRRIEESKLTKVEKVHTNGDMSHHHKGFSNAKLDDIQEFLADLKT 240

[Close]

BLAST of Sed0015508 vs. ExPASy TrEMBL
Match: A0A5A7US57 (Centromere protein Mis12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00040 PE=3 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.4e-101
Identity = 198/239 (82.85%), Postives = 216/239 (90.38%), Query Frame = 0


Query: 1   MEGSNGEAVFDSLNLNPQLFINEALNFVDDLVDGAFDYYQSQASADLKTEGSNRSQDLIL 60
           MEGS GE+VF+SLNLNPQLFINEALN VDDLVD AFD+YQSQASA LKTEGS+RSQDL L
Sbjct: 1   MEGSKGESVFNSLNLNPQLFINEALNTVDDLVDDAFDFYQSQASAALKTEGSDRSQDLTL 60

Query: 61  GISRVRSLVQSGLDKRLAMWEKYCLNNCFSVPEGFSLPSYDEPPADTSISH--DVDLDTE 120
           GIS+VR+LVQ GLDKRLAMWEKYCLN+CFSVPEGFSLPS DE P  TSI+H  DVDLDTE
Sbjct: 61  GISQVRALVQLGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPGVTSINHDQDVDLDTE 120

Query: 121 LDSLRNKLSEVRKENVVLNQELQALERQTASSNSQVNHFNEALQLYEQNSVNEMFQEMMG 180
           LD LRNKLSEVRKEN+VLNQELQALERQTASSNSQ++HFNEALQLYEQ+SVN+MFQEM+ 
Sbjct: 121 LDLLRNKLSEVRKENIVLNQELQALERQTASSNSQISHFNEALQLYEQSSVNDMFQEMIK 180

Query: 181 TASELRAKIGKLKKRRMEESKLTKVEKVDTTGDFSHHHKGFSNAKLVDIQELLADLKTL 238
           TASELRAKIGK+KKRR EE+KL KVEKV T GD SHHH GFSNAKL DIQE L+DLK +
Sbjct: 181 TASELRAKIGKMKKRRTEEAKLAKVEKVHTNGDISHHHNGFSNAKLDDIQEFLSDLKKI 239

[Close]

BLAST of Sed0015508 vs. TAIR 10
Match: AT5G35520.1 (minichromosome instability 12 (mis12)-like )

HSP 1 Score: 201.8 bits (512), Expect = 6.0e-52
Identity = 118/244 (48.36%), Postives = 166/244 (68.03%), Query Frame = 0


Query: 1   MEGSNGEAVFDSLNLNPQLFINEALNFVDDLVDGAFDYYQSQASADLKTEGSN--RSQDL 60
           MEGS  EAVFDS+NLNPQ+FINEA+N V+D VD AFD+Y   AS  LK +GS+  +SQ L
Sbjct: 1   MEGSKSEAVFDSMNLNPQIFINEAINSVEDYVDQAFDFYARDASKSLKIKGSDKQKSQAL 60

Query: 61  ILGISRVRSLVQSGLDKRLAMWEKYCLNNCFSVPEGFSLPSYDEPPA-DTSISHDVDLDT 120
             GI+RVR L+ S +D RL +WE Y L  CF+VP+GF LP  +E  +      +D++LD 
Sbjct: 61  SNGIARVRGLLLSVIDNRLKLWESYSLRFCFAVPDGFVLPKSEESSSVHQDGLYDLELDA 120

Query: 121 ELDSLRNKLSEVRKENVVLNQELQALERQTASSNSQVNHFNEALQLYEQNSVNEMFQEMM 180
           ELDSLR+KL+ V K +V L+ ELQALER + S    +   NEAL+LY+++S++E+F+EM 
Sbjct: 121 ELDSLRDKLNVVGKRSVELDSELQALERSSVSRERSLRLVNEALELYDESSMDEIFKEMT 180

Query: 181 GTASELRAKIGKLKKRRMEESKLTKVEKVDTTGDFSHHHKGFS----NAKLVDIQELLAD 238
             ASELRA + +LK RRM+ S+  KV+++       +H K FS    + KL D+++  A+
Sbjct: 181 KMASELRASVERLKTRRMKASESAKVKRL------KNHGKEFSAMTFDGKLEDLEKFQAE 238

The following BLAST results are available for this feature:

BLAST of Sed0015508 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589575.1	2.8e-107	87.55	Protein MIS12-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023515499.1	3.6e-107	87.55	protein MIS12 homolog isoform X2 [Cucurbita pepo subsp. pepo]	[more]
KAG7023263.1	3.0e-106	86.72	Protein MIS12-like protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022921372.1	6.8e-106	86.31	protein MIS12 homolog [Cucurbita moschata]	[more]
XP_023515498.1	8.9e-106	87.19	protein MIS12 homolog isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0015508 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2V0Z5	8.5e-51	48.36	Protein MIS12 homolog OS=Arabidopsis thaliana OX=3702 GN=MIS12 PE=3 SV=1	[more]

BLAST of Sed0015508 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E0A1	3.3e-106	86.31	protein MIS12 homolog OS=Cucurbita moschata OX=3662 GN=LOC111429660 PE=3 SV=1	[more]
A0A6J1JME3	7.3e-106	86.31	protein MIS12 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=...	[more]
A0A6J1JD43	1.8e-104	85.95	protein MIS12 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=...	[more]
A0A6J1C2Q6	5.2e-104	84.65	protein MIS12 homolog OS=Momordica charantia OX=3673 GN=LOC111006900 PE=3 SV=1	[more]
A0A5A7US57	2.4e-101	82.85	Centromere protein Mis12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of Sed0015508 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35520.1	6.0e-52	48.36	minichromosome instability 12 (mis12)-like	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 112..153
IPR008685	Centromere protein Mis12	PFAM	PF05859	Mis12	coord: 11..137 e-value: 9.4E-22 score: 77.6
IPR008685	Centromere protein Mis12	PANTHER	PTHR14527	PROTEIN MIS12 HOMOLOG	coord: 1..235

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015508.1	Sed0015508.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0051382	kinetochore assembly
biological_process	GO:0000070	mitotic sister chromatid segregation
biological_process	GO:0034501	protein localization to kinetochore
biological_process	GO:0000278	mitotic cell cycle
cellular_component	GO:0000818	nuclear MIS12/MIND complex
cellular_component	GO:0000775	chromosome, centromeric region
cellular_component	GO:0005634	nucleus