Sed0015505 (gene) Chayote v1

Overview


Name	Sed0015505
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DNA topoisomerase 2
Location	LG04: 34396343 .. 34396863 (+)
RNA-Seq Expression	Sed0015505
Synteny	Sed0015505

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGTGTGTACCCTTGGTTTGTGAAGATTATACAACTTGATGATGGTCTAACTTCATTTTTTTCAATTTTCAGTTTCAGCCATGGAAACCGAAGGACCAGCCGAGAAGAAAGAACCCAGCAAGAGAGCAGCTGCCACGAAGAAAACTAGTGTAACTTCTGCTCAGACTTCCCAGGCAGCTGCAAATGGCAAAACAACCAAGCCCCCTGCAGCAGGGAAGAACCTCGGGATCATGCCTGAGAAGAAAGTGAGGAAGATAAGGGCATCTCCTTTCAACAAGAAAAGTGGATCCATCCTTGGAACAGTTAGTTTAGAAGGAGATGGAAATGAAGGGAAGATGATGGGATCTGCTTCTTCGGAGACGACGGAAGAAACCGCTGGATATCCACTGGAGAGAGGAAGATCACAGAGGTCTAACAGAACCCAGGTGAGATATGTGGTTAGTGATTCAGACAGCGAGCAGCCAGATGCTGAGGATTCTGACTTTGAAGAAGAAGATGGAGACTTTGATGAAGATTGA

mRNA sequence

ATGCTGTGTGTACCCTTGATTATACAACTTGATGATGTTTCAGCCATGGAAACCGAAGGACCAGCCGAGAAGAAAGAACCCAGCAAGAGAGCAGCTGCCACGAAGAAAACTAGTGTAACTTCTGCTCAGACTTCCCAGGCAGCTGCAAATGGCAAAACAACCAAGCCCCCTGCAGCAGGGAAGAACCTCGGGATCATGCCTGAGAAGAAAGTGAGGAAGATAAGGGCATCTCCTTTCAACAAGAAAAGTGGATCCATCCTTGGAACAGTTAGTTTAGAAGGAGATGGAAATGAAGGGAAGATGATGGGATCTGCTTCTTCGGAGACGACGGAAGAAACCGCTGGATATCCACTGGAGAGAGGAAGATCACAGAGGTCTAACAGAACCCAGGTGAGATATGTGGTTAGTGATTCAGACAGCGAGCAGCCAGATGCTGAGGATTCTGACTTTGAAGAAGAAGATGGAGACTTTGATGAAGATTGA

Coding sequence (CDS)

ATGCTGTGTGTACCCTTGATTATACAACTTGATGATGTTTCAGCCATGGAAACCGAAGGACCAGCCGAGAAGAAAGAACCCAGCAAGAGAGCAGCTGCCACGAAGAAAACTAGTGTAACTTCTGCTCAGACTTCCCAGGCAGCTGCAAATGGCAAAACAACCAAGCCCCCTGCAGCAGGGAAGAACCTCGGGATCATGCCTGAGAAGAAAGTGAGGAAGATAAGGGCATCTCCTTTCAACAAGAAAAGTGGATCCATCCTTGGAACAGTTAGTTTAGAAGGAGATGGAAATGAAGGGAAGATGATGGGATCTGCTTCTTCGGAGACGACGGAAGAAACCGCTGGATATCCACTGGAGAGAGGAAGATCACAGAGGTCTAACAGAACCCAGGTGAGATATGTGGTTAGTGATTCAGACAGCGAGCAGCCAGATGCTGAGGATTCTGACTTTGAAGAAGAAGATGGAGACTTTGATGAAGATTGA

Protein sequence

MLCVPLIIQLDDVSAMETEGPAEKKEPSKRAAATKKTSVTSAQTSQAAANGKTTKPPAAGKNLGIMPEKKVRKIRASPFNKKSGSILGTVSLEGDGNEGKMMGSASSETTEETAGYPLERGRSQRSNRTQVRYVVSDSDSEQPDAEDSDFEEEDGDFDED

Homology

[Close]

BLAST of Sed0015505 vs. NCBI nr
Match: XP_022152631.1 (DNA topoisomerase 2 isoform X1 [Momordica charantia])

HSP 1 Score: 138.7 bits (348), Expect = 4.5e-29
Identity = 104/204 (50.98%), Postives = 121/204 (59.31%), Query Frame = 0


Query: 12   DVSAMETEGP-----AEKKEPSKRAAATKKTSVTSAQTS--------------------- 71
            +VSAMETE P     A+KKEPSKRA A KKT+  SAQ S                     
Sbjct: 1289 EVSAMETEVPQVGAAAKKKEPSKRAPAKKKTTAKSAQISDNDDSDDDDFEIKEVAPPAAK 1348

Query: 72   ----QAAANGKTTKPPAAGK----------------------NLGIMPEKKVRKIRASPF 131
                + AAN KTTKPPAA K                      N GI PEKKVRK+RASPF
Sbjct: 1349 KGGGRKAANAKTTKPPAAAKKREAAAGKLGQKLITQMLGPTQNTGISPEKKVRKMRASPF 1408

Query: 132  NKKSGSILGTVSLEGD------GNEGKMMGSASSETTEETAGYPLERGRSQRSNRTQVRY 155
            NKKSGSILG V  E +      GNEGK+MGSASSET EE+AG+   RGRSQR+NRTQV+Y
Sbjct: 1409 NKKSGSILGRVGEEEEEEGEENGNEGKIMGSASSETAEESAGFLPARGRSQRANRTQVKY 1468

[Close]

BLAST of Sed0015505 vs. NCBI nr
Match: XP_022982563.1 (DNA topoisomerase 2 isoform X2 [Cucurbita maxima])

HSP 1 Score: 135.6 bits (340), Expect = 3.8e-28
Identity = 113/203 (55.67%), Postives = 122/203 (60.10%), Query Frame = 0


Query: 12   DVSAMETEGP-----AEKKEPSKRAAATKKTSVTSAQTS--------------------- 71
            +VSAMETE P     A+KKEPSKRAAA KKT+  SAQ S                     
Sbjct: 1290 EVSAMETEVPKVQAAAKKKEPSKRAAAKKKTTAKSAQISDDSDDGDFEIKEIAPPAAKKG 1349

Query: 72   ---QAAANGKTTK-----PPAA-------------GKNLGIMPEKKVRKIRASPFNKKSG 131
               +AAAN KTTK      P A              +N GI PEKKVRKIR SPFNKKSG
Sbjct: 1350 GGRKAAANAKTTKTTKKQEPVARLGQKLITQMLEPTENSGISPEKKVRKIRESPFNKKSG 1409

Query: 132  SILG------TVSLEGDGNEGKMMGSASSETT-EETAGYPLERGRSQRSNRTQVRYVVSD 161
            S+LG         +E  GNEGKMMGSASSETT EE A  PL RGRSQR+NRTQVRYVVSD
Sbjct: 1410 SVLGRKIGEEEEEVEEAGNEGKMMGSASSETTDEEVARVPLARGRSQRTNRTQVRYVVSD 1469

[Close]

BLAST of Sed0015505 vs. NCBI nr
Match: XP_022982562.1 (DNA topoisomerase 2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 135.6 bits (340), Expect = 3.8e-28
Identity = 113/203 (55.67%), Postives = 122/203 (60.10%), Query Frame = 0


Query: 12   DVSAMETEGP-----AEKKEPSKRAAATKKTSVTSAQTS--------------------- 71
            +VSAMETE P     A+KKEPSKRAAA KKT+  SAQ S                     
Sbjct: 1291 EVSAMETEVPKVQAAAKKKEPSKRAAAKKKTTAKSAQISDDSDDGDFEIKEIAPPAAKKG 1350

Query: 72   ---QAAANGKTTK-----PPAA-------------GKNLGIMPEKKVRKIRASPFNKKSG 131
               +AAAN KTTK      P A              +N GI PEKKVRKIR SPFNKKSG
Sbjct: 1351 GGRKAAANAKTTKTTKKQEPVARLGQKLITQMLEPTENSGISPEKKVRKIRESPFNKKSG 1410

Query: 132  SILG------TVSLEGDGNEGKMMGSASSETT-EETAGYPLERGRSQRSNRTQVRYVVSD 161
            S+LG         +E  GNEGKMMGSASSETT EE A  PL RGRSQR+NRTQVRYVVSD
Sbjct: 1411 SVLGRKIGEEEEEVEEAGNEGKMMGSASSETTDEEVARVPLARGRSQRTNRTQVRYVVSD 1470

[Close]

BLAST of Sed0015505 vs. NCBI nr
Match: XP_022152632.1 (DNA topoisomerase 2 isoform X2 [Momordica charantia])

HSP 1 Score: 135.6 bits (340), Expect = 3.8e-28
Identity = 103/205 (50.24%), Postives = 119/205 (58.05%), Query Frame = 0


Query: 11   DDVSAMETEGP-----AEKKEPSKRAAATKKTSVTSAQTS-------------------- 70
            D   AMETE P     A+KKEPSKRA A KKT+  SAQ S                    
Sbjct: 1286 DRSEAMETEVPQVGAAAKKKEPSKRAPAKKKTTAKSAQISDNDDSDDDDFEIKEVAPPAA 1345

Query: 71   -----QAAANGKTTKPPAAGK----------------------NLGIMPEKKVRKIRASP 130
                 + AAN KTTKPPAA K                      N GI PEKKVRK+RASP
Sbjct: 1346 KKGGGRKAANAKTTKPPAAAKKREAAAGKLGQKLITQMLGPTQNTGISPEKKVRKMRASP 1405

Query: 131  FNKKSGSILGTVSLEGD------GNEGKMMGSASSETTEETAGYPLERGRSQRSNRTQVR 155
            FNKKSGSILG V  E +      GNEGK+MGSASSET EE+AG+   RGRSQR+NRTQV+
Sbjct: 1406 FNKKSGSILGRVGEEEEEEGEENGNEGKIMGSASSETAEESAGFLPARGRSQRANRTQVK 1465

[Close]

BLAST of Sed0015505 vs. NCBI nr
Match: XP_023527823.1 (DNA topoisomerase 2 isoform X3 [Cucurbita pepo subsp. pepo] >XP_023527824.1 DNA topoisomerase 2 isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-27
Identity = 112/202 (55.45%), Postives = 122/202 (60.40%), Query Frame = 0


Query: 12   DVSAMETEGP-----AEKKEPSKRAAATKKTSVTSAQTS--------------------- 71
            +VSAMETE P     A+KKEPSKRAAA KKT+  SAQ S                     
Sbjct: 1291 EVSAMETEVPKVQAAAKKKEPSKRAAAKKKTTAKSAQISDDSDNGDFEIKEIAPPAAKKG 1350

Query: 72   ---QAAANGKTTK-----PPAA-------------GKNLGIMPEKKVRKIRASPFNKKSG 131
               +AAAN KTTK      P A              +N GI PEKKVRKIR SPFNKKSG
Sbjct: 1351 GGRKAAANAKTTKTTKKQEPVARLGQKLITQMLEPTENSGISPEKKVRKIRESPFNKKSG 1410

Query: 132  SILGTVSLEGD-----GNEGKMMGSASSETTEETAG-YPLERGRSQRSNRTQVRYVVSDS 161
            S+LG    E +     GNEGKMMGSASSETT+E  G  PL RGRSQR+NRTQVRYVVSDS
Sbjct: 1411 SMLGRKIGEEEEEVEAGNEGKMMGSASSETTDEEVGRVPLARGRSQRTNRTQVRYVVSDS 1470

[Close]

BLAST of Sed0015505 vs. ExPASy Swiss-Prot
Match: O24308 (DNA topoisomerase 2 OS=Pisum sativum OX=3888 GN=TOP2 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.4e-11
Identity = 63/149 (42.28%), Postives = 79/149 (53.02%), Query Frame = 0


Query: 15   AMETEGPAEKKEPSKRAAATKKTSVTSAQTSQAAANGKTTKPPAAGKNLGIMPEKKVRKI 74
            A +    A  K P+K  AA KK SV    T Q+A     T      +  G  PEKKVRK+
Sbjct: 1316 AAQNAKKAPAKAPAKAPAAPKKRSV---GTKQSAGQKLLTDMLQPAEGTGTSPEKKVRKM 1375

Query: 75   RASPFNKKSGSILG------TVSLEGDGNEGKMMGSASSETTEETAGYPLERGRSQRSNR 134
            R SPFNKKSGSILG       +S   D + G    +  SE           R R QR+NR
Sbjct: 1376 RESPFNKKSGSILGRAAAAKDISPIADCSAGSASNTPLSEDEVVEIAPQPARARPQRANR 1435

Query: 135  TQVRYVVSDSDSEQ---PDAEDSDFEEED 155
            TQ++Y +S+S+SE+    DAE SDFEE+D
Sbjct: 1436 TQMKYALSESESEEDSDEDAELSDFEEDD 1461

[Close]

BLAST of Sed0015505 vs. ExPASy Swiss-Prot
Match: P30182 (DNA topoisomerase 2 OS=Arabidopsis thaliana OX=3702 GN=TOP2 PE=2 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 1.5e-06
Identity = 50/139 (35.97%), Postives = 78/139 (56.12%), Query Frame = 0


Query: 22   AEKKEPSKRAAATKKTSVTSAQTSQAAANGKTTKPPAAGKNLGIMPEKKVRKIRASPFNK 81
            A  K+  ++ AATK     +A   +    GK T        +G+ PEKKVRK+R+SPFNK
Sbjct: 1343 APVKKGGRKPAATKAAKPPAAPRKR----GKQTVASTEVLAIGVSPEKKVRKMRSSPFNK 1402

Query: 82   KSGSILGTVSLEGDGNEGKMMGSASSETTEETAGYPLERGRSQRSNRTQVRYVVSDSDSE 141
            KS S++    L  +  E      A + ++E++ G      R QR+NR ++ YV+SDS+SE
Sbjct: 1403 KSSSVMS--RLADNKEEESSENVAGNSSSEKSGGDVSAISRPQRANRRKMTYVLSDSESE 1462

Query: 142  QPDAEDSDFEEEDGDFDED 161
               A DS+F++ + D D++
Sbjct: 1463 --SANDSEFDDIEDDEDDE 1473

[Close]

BLAST of Sed0015505 vs. ExPASy TrEMBL
Match: A0A6J1DIB5 (DNA topoisomerase 2 OS=Momordica charantia OX=3673 GN=LOC111020305 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 2.2e-29
Identity = 104/204 (50.98%), Postives = 121/204 (59.31%), Query Frame = 0


Query: 12   DVSAMETEGP-----AEKKEPSKRAAATKKTSVTSAQTS--------------------- 71
            +VSAMETE P     A+KKEPSKRA A KKT+  SAQ S                     
Sbjct: 1289 EVSAMETEVPQVGAAAKKKEPSKRAPAKKKTTAKSAQISDNDDSDDDDFEIKEVAPPAAK 1348

Query: 72   ----QAAANGKTTKPPAAGK----------------------NLGIMPEKKVRKIRASPF 131
                + AAN KTTKPPAA K                      N GI PEKKVRK+RASPF
Sbjct: 1349 KGGGRKAANAKTTKPPAAAKKREAAAGKLGQKLITQMLGPTQNTGISPEKKVRKMRASPF 1408

Query: 132  NKKSGSILGTVSLEGD------GNEGKMMGSASSETTEETAGYPLERGRSQRSNRTQVRY 155
            NKKSGSILG V  E +      GNEGK+MGSASSET EE+AG+   RGRSQR+NRTQV+Y
Sbjct: 1409 NKKSGSILGRVGEEEEEEGEENGNEGKIMGSASSETAEESAGFLPARGRSQRANRTQVKY 1468

[Close]

BLAST of Sed0015505 vs. ExPASy TrEMBL
Match: A0A6J1J555 (DNA topoisomerase 2 OS=Cucurbita maxima OX=3661 GN=LOC111481402 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.9e-28
Identity = 113/203 (55.67%), Postives = 122/203 (60.10%), Query Frame = 0


Query: 12   DVSAMETEGP-----AEKKEPSKRAAATKKTSVTSAQTS--------------------- 71
            +VSAMETE P     A+KKEPSKRAAA KKT+  SAQ S                     
Sbjct: 1290 EVSAMETEVPKVQAAAKKKEPSKRAAAKKKTTAKSAQISDDSDDGDFEIKEIAPPAAKKG 1349

Query: 72   ---QAAANGKTTK-----PPAA-------------GKNLGIMPEKKVRKIRASPFNKKSG 131
               +AAAN KTTK      P A              +N GI PEKKVRKIR SPFNKKSG
Sbjct: 1350 GGRKAAANAKTTKTTKKQEPVARLGQKLITQMLEPTENSGISPEKKVRKIRESPFNKKSG 1409

Query: 132  SILG------TVSLEGDGNEGKMMGSASSETT-EETAGYPLERGRSQRSNRTQVRYVVSD 161
            S+LG         +E  GNEGKMMGSASSETT EE A  PL RGRSQR+NRTQVRYVVSD
Sbjct: 1410 SVLGRKIGEEEEEVEEAGNEGKMMGSASSETTDEEVARVPLARGRSQRTNRTQVRYVVSD 1469

[Close]

BLAST of Sed0015505 vs. ExPASy TrEMBL
Match: A0A6J1IWX9 (DNA topoisomerase 2 OS=Cucurbita maxima OX=3661 GN=LOC111481402 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.9e-28
Identity = 113/203 (55.67%), Postives = 122/203 (60.10%), Query Frame = 0


Query: 12   DVSAMETEGP-----AEKKEPSKRAAATKKTSVTSAQTS--------------------- 71
            +VSAMETE P     A+KKEPSKRAAA KKT+  SAQ S                     
Sbjct: 1291 EVSAMETEVPKVQAAAKKKEPSKRAAAKKKTTAKSAQISDDSDDGDFEIKEIAPPAAKKG 1350

Query: 72   ---QAAANGKTTK-----PPAA-------------GKNLGIMPEKKVRKIRASPFNKKSG 131
               +AAAN KTTK      P A              +N GI PEKKVRKIR SPFNKKSG
Sbjct: 1351 GGRKAAANAKTTKTTKKQEPVARLGQKLITQMLEPTENSGISPEKKVRKIRESPFNKKSG 1410

Query: 132  SILG------TVSLEGDGNEGKMMGSASSETT-EETAGYPLERGRSQRSNRTQVRYVVSD 161
            S+LG         +E  GNEGKMMGSASSETT EE A  PL RGRSQR+NRTQVRYVVSD
Sbjct: 1411 SVLGRKIGEEEEEVEEAGNEGKMMGSASSETTDEEVARVPLARGRSQRTNRTQVRYVVSD 1470

[Close]

BLAST of Sed0015505 vs. ExPASy TrEMBL
Match: A0A6J1DGT3 (DNA topoisomerase 2 OS=Momordica charantia OX=3673 GN=LOC111020305 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.9e-28
Identity = 103/205 (50.24%), Postives = 119/205 (58.05%), Query Frame = 0


Query: 11   DDVSAMETEGP-----AEKKEPSKRAAATKKTSVTSAQTS-------------------- 70
            D   AMETE P     A+KKEPSKRA A KKT+  SAQ S                    
Sbjct: 1286 DRSEAMETEVPQVGAAAKKKEPSKRAPAKKKTTAKSAQISDNDDSDDDDFEIKEVAPPAA 1345

Query: 71   -----QAAANGKTTKPPAAGK----------------------NLGIMPEKKVRKIRASP 130
                 + AAN KTTKPPAA K                      N GI PEKKVRK+RASP
Sbjct: 1346 KKGGGRKAANAKTTKPPAAAKKREAAAGKLGQKLITQMLGPTQNTGISPEKKVRKMRASP 1405

Query: 131  FNKKSGSILGTVSLEGD------GNEGKMMGSASSETTEETAGYPLERGRSQRSNRTQVR 155
            FNKKSGSILG V  E +      GNEGK+MGSASSET EE+AG+   RGRSQR+NRTQV+
Sbjct: 1406 FNKKSGSILGRVGEEEEEEGEENGNEGKIMGSASSETAEESAGFLPARGRSQRANRTQVK 1465

[Close]

BLAST of Sed0015505 vs. ExPASy TrEMBL
Match: A0A6J1F9E0 (DNA topoisomerase 2 OS=Cucurbita moschata OX=3662 GN=LOC111442005 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.2e-27
Identity = 112/203 (55.17%), Postives = 122/203 (60.10%), Query Frame = 0


Query: 12   DVSAMETEGP-----AEKKEPSKRAAATKKTSVTSAQTS--------------------- 71
            +VSAMETE P     A+KKEPSKRAAA KKT+  SAQ S                     
Sbjct: 1292 EVSAMETEVPKVQAAAKKKEPSKRAAAKKKTTAKSAQISDDSDDGDFEIKEIAPPAAKKG 1351

Query: 72   ---QAAANGKTTK-----PPAA-------------GKNLGIMPEKKVRKIRASPFNKKSG 131
               +AAAN KTTK      P A              +N GI PEKKVRKIR SPFNKKSG
Sbjct: 1352 GGRKAAANAKTTKTTKKQEPVARLGQKLITQMLEPTENSGISPEKKVRKIRESPFNKKSG 1411

Query: 132  SILG------TVSLEGDGNEGKMMGSASSETT-EETAGYPLERGRSQRSNRTQVRYVVSD 161
            S+LG         +E  GNEGKMMGSASSETT EE A  PL RGRSQR+NRTQVRYVVSD
Sbjct: 1412 SMLGRKIGEEEEEVEEAGNEGKMMGSASSETTDEEVARVPLARGRSQRTNRTQVRYVVSD 1471

[Close]

BLAST of Sed0015505 vs. TAIR 10
Match: AT3G23890.1 (topoisomerase II )

HSP 1 Score: 54.3 bits (129), Expect = 1.0e-07
Identity = 50/139 (35.97%), Postives = 78/139 (56.12%), Query Frame = 0


Query: 22   AEKKEPSKRAAATKKTSVTSAQTSQAAANGKTTKPPAAGKNLGIMPEKKVRKIRASPFNK 81
            A  K+  ++ AATK     +A   +    GK T        +G+ PEKKVRK+R+SPFNK
Sbjct: 1343 APVKKGGRKPAATKAAKPPAAPRKR----GKQTVASTEVLAIGVSPEKKVRKMRSSPFNK 1402

Query: 82   KSGSILGTVSLEGDGNEGKMMGSASSETTEETAGYPLERGRSQRSNRTQVRYVVSDSDSE 141
            KS S++    L  +  E      A + ++E++ G      R QR+NR ++ YV+SDS+SE
Sbjct: 1403 KSSSVMS--RLADNKEEESSENVAGNSSSEKSGGDVSAISRPQRANRRKMTYVLSDSESE 1462

Query: 142  QPDAEDSDFEEEDGDFDED 161
               A DS+F++ + D D++
Sbjct: 1463 --SANDSEFDDIEDDEDDE 1473

[Close]

BLAST of Sed0015505 vs. TAIR 10
Match: AT3G23890.2 (topoisomerase II )

HSP 1 Score: 54.3 bits (129), Expect = 1.0e-07
Identity = 50/139 (35.97%), Postives = 78/139 (56.12%), Query Frame = 0


Query: 22   AEKKEPSKRAAATKKTSVTSAQTSQAAANGKTTKPPAAGKNLGIMPEKKVRKIRASPFNK 81
            A  K+  ++ AATK     +A   +    GK T        +G+ PEKKVRK+R+SPFNK
Sbjct: 1308 APVKKGGRKPAATKAAKPPAAPRKR----GKQTVASTEVLAIGVSPEKKVRKMRSSPFNK 1367

Query: 82   KSGSILGTVSLEGDGNEGKMMGSASSETTEETAGYPLERGRSQRSNRTQVRYVVSDSDSE 141
            KS S++    L  +  E      A + ++E++ G      R QR+NR ++ YV+SDS+SE
Sbjct: 1368 KSSSVMS--RLADNKEEESSENVAGNSSSEKSGGDVSAISRPQRANRRKMTYVLSDSESE 1427

Query: 142  QPDAEDSDFEEEDGDFDED 161
               A DS+F++ + D D++
Sbjct: 1428 --SANDSEFDDIEDDEDDE 1438

The following BLAST results are available for this feature:

BLAST of Sed0015505 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152631.1	4.5e-29	50.98	DNA topoisomerase 2 isoform X1 [Momordica charantia]	[more]
XP_022982563.1	3.8e-28	55.67	DNA topoisomerase 2 isoform X2 [Cucurbita maxima]	[more]
XP_022982562.1	3.8e-28	55.67	DNA topoisomerase 2 isoform X1 [Cucurbita maxima]	[more]
XP_022152632.1	3.8e-28	50.24	DNA topoisomerase 2 isoform X2 [Momordica charantia]	[more]
XP_023527823.1	1.1e-27	55.45	DNA topoisomerase 2 isoform X3 [Cucurbita pepo subsp. pepo] >XP_023527824.1 DNA ...	[more]

BLAST of Sed0015505 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24308	3.4e-11	42.28	DNA topoisomerase 2 OS=Pisum sativum OX=3888 GN=TOP2 PE=2 SV=1	[more]
P30182	1.5e-06	35.97	DNA topoisomerase 2 OS=Arabidopsis thaliana OX=3702 GN=TOP2 PE=2 SV=2	[more]

BLAST of Sed0015505 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DIB5	2.2e-29	50.98	DNA topoisomerase 2 OS=Momordica charantia OX=3673 GN=LOC111020305 PE=3 SV=1	[more]
A0A6J1J555	1.9e-28	55.67	DNA topoisomerase 2 OS=Cucurbita maxima OX=3661 GN=LOC111481402 PE=3 SV=1	[more]
A0A6J1IWX9	1.9e-28	55.67	DNA topoisomerase 2 OS=Cucurbita maxima OX=3661 GN=LOC111481402 PE=3 SV=1	[more]
A0A6J1DGT3	1.9e-28	50.24	DNA topoisomerase 2 OS=Momordica charantia OX=3673 GN=LOC111020305 PE=3 SV=1	[more]
A0A6J1F9E0	1.2e-27	55.17	DNA topoisomerase 2 OS=Cucurbita moschata OX=3662 GN=LOC111442005 PE=3 SV=1	[more]

BLAST of Sed0015505 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23890.1	1.0e-07	35.97	topoisomerase II	[more]
AT3G23890.2	1.0e-07	35.97	topoisomerase II	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..32

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015505.1	Sed0015505.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
molecular_function	GO:0005488	binding