Sed0015452 (gene) Chayote v1

Overview


Name	Sed0015452
Type	gene
Organism	Sechium edule (Chayote v1)
Description	POU domain, class 6, transcription factor 2-like
Location	LG05: 36204133 .. 36205645 (-)
RNA-Seq Expression	Sed0015452
Synteny	Sed0015452

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGTTGATGAATTCTACCGGCAACCGGCTGCCGTTCCTTTCAAGTGGGAGATCAAACCCGGCGTCCCCAAGAACCACGACCGGCTCCCCCAGTTTCCCGGTCACTCTCCTCAACTTCATCCACCGCCGCACAAGCAGAGGCTGAAGCCTCCTCCGGCCGTCACCCATTTCCACCATCCTTCGAACTCCCTTCACTCGTCCTCCCGAACCCGGTCCGACCGGTGGCCATTCTCCCGGTCCAACCGCCGCGAACCCGACCTGGTCTCCGTCGGTTGCTTTCCCTCCTCGTCGTTGCCTTCCCGGAAATCGAGCAAGAGCGCGAACCGGACACCCGAACCGGATTACAGCTCTGAATCGGAGACTTTGTCGCGATGGTCGGTTCCTACCAGAAAGTCGTCGATTTCGCCGTTCCGATATTCGGTTTCGTCGTCGCCGGCGTCTTTCTCGTCCTACTCGTACCAGTCATCGCCACGTCAGACTAGTGATTCTGAGTGGGCCGGGTTTGGGCTATTTTGATTTGGCCCATTCTCGGATCCTATAAGACCAAGTGCATTAAAAGAAGTTGGGCTGAGTTTCTGAGGCCCATATGTAGCCCATCTATCAAGTGCTTTAGTGGGCTTTAGGCAAAAGTCAGGAAGCTTTGAATCCCAATTGTATTGTGCTCTGCCATCGTAGGGATTTTCTTAAAACCCCCTGTATGCTGCTCTATATAAACAATAAAGATATTTTGTTTCCTTGAGGTATTTGATTTATGCTTTATTTTAAATAATTAACTTTCATGAAATTAATCTTATCTAGAATCGGCCAACAATAACTGTAACTCAACAACATTAGTCTATATCTAATAAAGAGATTATGGTTTAAATCACTACTAAAAAAATGTTTATTAGGACTATTAGCTTTAGCTTTACTAACCTAGAATTTAATACTTCACTTTTGAAGTCAAAAACTGATAACCAATGTCTAAAACTAAACAACATGAAGAAGATGAAAAATAAAACATCTTTTTTGAAGTTTGGCAAAGAAAAATAACTCAACTACTGACAATTGATTAAGGGACTATGGATTCAAATCTTCCAACTCCTATAATTTTTTTTTTTTTTTGAGAAGTGTTTGGGACAAGGGGATCAAACTGGAAGATGGAGATAAAATCCCTCTACTGATCTTTGGACTATTACAAATTATTCATCCCATAGTTTCTATTCATCTTTCCACGATTTCATTTCTTCTAATCATTTTTCAATATTTTAATTCATCTGTAATCCTTTCATGCACTTCTGACATAGATAATAATTTTTTATAGTCATTTATTATGGTAATAGTTTTTCATAATTATTCCATTCCCATAAAACATTTTAATAATTATTCAATTCACGTCAAACAAGTGTAATAACTTCTTCATAATCATTCTTACACCTCAAACACAAATACAAAATTCTAGGGTATCATTCTTTCGTTTTATTTCTCACTTCTTACAAGAATGCCCTTGAGGTTTTTCCGACTAAGTTAA

mRNA sequence

ATGGACGTTGATGAATTCTACCGGCAACCGGCTGCCGTTCCTTTCAAGTGGGAGATCAAACCCGGCGTCCCCAAGAACCACGACCGGCTCCCCCAGTTTCCCGGTCACTCTCCTCAACTTCATCCACCGCCGCACAAGCAGAGGCTGAAGCCTCCTCCGGCCGTCACCCATTTCCACCATCCTTCGAACTCCCTTCACTCGTCCTCCCGAACCCGGTCCGACCGGTGGCCATTCTCCCGGTCCAACCGCCGCGAACCCGACCTGGTCTCCGTCGGTTGCTTTCCCTCCTCGTCGTTGCCTTCCCGGAAATCGAGCAAGAGCGCGAACCGGACACCCGAACCGGATTACAGCTCTGAATCGGAGACTTTGTCGCGATGGTCGGGTATCATTCTTTCGTTTTATTTCTCACTTCTTACAAGAATGCCCTTGAGGTTTTTCCGACTAAGTTAA

Coding sequence (CDS)

ATGGACGTTGATGAATTCTACCGGCAACCGGCTGCCGTTCCTTTCAAGTGGGAGATCAAACCCGGCGTCCCCAAGAACCACGACCGGCTCCCCCAGTTTCCCGGTCACTCTCCTCAACTTCATCCACCGCCGCACAAGCAGAGGCTGAAGCCTCCTCCGGCCGTCACCCATTTCCACCATCCTTCGAACTCCCTTCACTCGTCCTCCCGAACCCGGTCCGACCGGTGGCCATTCTCCCGGTCCAACCGCCGCGAACCCGACCTGGTCTCCGTCGGTTGCTTTCCCTCCTCGTCGTTGCCTTCCCGGAAATCGAGCAAGAGCGCGAACCGGACACCCGAACCGGATTACAGCTCTGAATCGGAGACTTTGTCGCGATGGTCGGGTATCATTCTTTCGTTTTATTTCTCACTTCTTACAAGAATGCCCTTGAGGTTTTTCCGACTAAGTTAA

Protein sequence

MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLPSRKSSKSANRTPEPDYSSESETLSRWSGIILSFYFSLLTRMPLRFFRLS

Homology

[Close]

BLAST of Sed0015452 vs. NCBI nr
Match: XP_038899347.1 (uncharacterized protein LOC120086669 [Benincasa hispida])

HSP 1 Score: 171.8 bits (434), Expect = 4.5e-39
Identity = 91/127 (71.65%), Postives = 101/127 (79.53%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHH 60
           MDVDEFYRQPAAVPFKWEIKPGVPKNH RL   P HS    PP H Q+LKPPP+V++F H
Sbjct: 1   MDVDEFYRQPAAVPFKWEIKPGVPKNHHRLRHSPTHS----PPQHHQKLKPPPSVSNFLH 60

Query: 61  PSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLPSRKSSKSANRTPEPDYSSES 120
           PSNSLHSSSRTRSDRW FS     +P+ VS GCFP S LP+RKS+KS +R PEPDYSS  
Sbjct: 61  PSNSLHSSSRTRSDRWRFS-----QPEQVSSGCFP-SPLPNRKSAKSLSRNPEPDYSSGL 117

Query: 121 ETLSRWS 128
           E+LSRWS
Sbjct: 121 ESLSRWS 117

[Close]

BLAST of Sed0015452 vs. NCBI nr
Match: XP_022940016.1 (uncharacterized protein LOC111445775 [Cucurbita moschata])

HSP 1 Score: 162.5 bits (410), Expect = 2.7e-36
Identity = 89/129 (68.99%), Postives = 98/129 (75.97%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAV--THF 60
           MDVDEFYRQPAAVPFKWEIKPGVP+NH RL QFP HSPQ H     ++LKPPPAV  T F
Sbjct: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSPQQH-----KKLKPPPAVTATQF 60

Query: 61  HHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLPSRKSSKSANRTPEPDYSS 120
           H  SNSL    RTRSDRW  ++S   EP+ VSVGCF SS LP+RK+SK  NR PEPDY+S
Sbjct: 61  HRSSNSL----RTRSDRWSSTQSKLAEPEQVSVGCF-SSPLPNRKASKIVNRKPEPDYAS 119

Query: 121 ESETLSRWS 128
           E ETL RWS
Sbjct: 121 ELETLPRWS 119

[Close]

BLAST of Sed0015452 vs. NCBI nr
Match: XP_004142634.1 (uncharacterized protein LOC101220757 [Cucumis sativus])

HSP 1 Score: 161.4 bits (407), Expect = 6.1e-36
Identity = 86/128 (67.19%), Postives = 98/128 (76.56%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHH 60
           MD DEFYRQPAAVPFKWEIKPGVP+NH RL   P HSP  H   H+Q+LKPPPAV+HF H
Sbjct: 1   MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQH---HRQKLKPPPAVSHFPH 60

Query: 61  PSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLPSRKSSKSANR-TPEPDYSSE 120
           P NSLHSS RT+S+RW F RS +    + S GCFP S LP+RKS KS +R  PEPDYSS+
Sbjct: 61  PPNSLHSSPRTQSERWRFVRSEQ----VSSSGCFP-SPLPNRKSPKSVSRKLPEPDYSSD 120

Query: 121 SETLSRWS 128
            +TLSRWS
Sbjct: 121 LDTLSRWS 120

[Close]

BLAST of Sed0015452 vs. NCBI nr
Match: XP_008444194.1 (PREDICTED: uncharacterized protein LOC103487607 [Cucumis melo])

HSP 1 Score: 161.4 bits (407), Expect = 6.1e-36
Identity = 92/150 (61.33%), Postives = 107/150 (71.33%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHH 60
           MD DEFYR+PAAVPFKWEIKPGVP+NH R  Q P HSP  H   H+Q+LKPPPAV+HF H
Sbjct: 1   MDTDEFYRKPAAVPFKWEIKPGVPRNHHRPRQSPTHSPPQH---HRQKLKPPPAVSHFPH 60

Query: 61  PSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLPSRKSSKSANRT-PEPDYSSE 120
           PSNSLHSS RTRSDRW F RS +    + S GCFP S LP+RKS K+ +R  PEPDYSS+
Sbjct: 61  PSNSLHSSPRTRSDRWRFVRSEQ----VSSSGCFP-SPLPNRKSPKALSRKFPEPDYSSD 120

Query: 121 SETLSRWS----GIILSFYFSLLTRMPLRF 146
            +TLSRWS      I  F +S+ +  P  F
Sbjct: 121 LDTLSRWSVSSRKSISPFRYSVSSSSPSSF 142

[Close]

BLAST of Sed0015452 vs. NCBI nr
Match: KAE8649619.1 (hypothetical protein Csa_012837 [Cucumis sativus])

HSP 1 Score: 161.4 bits (407), Expect = 6.1e-36
Identity = 86/128 (67.19%), Postives = 98/128 (76.56%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHH 60
           MD DEFYRQPAAVPFKWEIKPGVP+NH RL   P HSP  H   H+Q+LKPPPAV+HF H
Sbjct: 1   MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQH---HRQKLKPPPAVSHFPH 60

Query: 61  PSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLPSRKSSKSANR-TPEPDYSSE 120
           P NSLHSS RT+S+RW F RS +    + S GCFP S LP+RKS KS +R  PEPDYSS+
Sbjct: 61  PPNSLHSSPRTQSERWRFVRSEQ----VSSSGCFP-SPLPNRKSPKSVSRKLPEPDYSSD 120

Query: 121 SETLSRWS 128
            +TLSRWS
Sbjct: 121 LDTLSRWS 120

[Close]

BLAST of Sed0015452 vs. ExPASy TrEMBL
Match: A0A6J1FHC7 (uncharacterized protein LOC111445775 OS=Cucurbita moschata OX=3662 GN=LOC111445775 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.3e-36
Identity = 89/129 (68.99%), Postives = 98/129 (75.97%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAV--THF 60
           MDVDEFYRQPAAVPFKWEIKPGVP+NH RL QFP HSPQ H     ++LKPPPAV  T F
Sbjct: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHQFPTHSPQQH-----KKLKPPPAVTATQF 60

Query: 61  HHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLPSRKSSKSANRTPEPDYSS 120
           H  SNSL    RTRSDRW  ++S   EP+ VSVGCF SS LP+RK+SK  NR PEPDY+S
Sbjct: 61  HRSSNSL----RTRSDRWSSTQSKLAEPEQVSVGCF-SSPLPNRKASKIVNRKPEPDYAS 119

Query: 121 ESETLSRWS 128
           E ETL RWS
Sbjct: 121 ELETLPRWS 119

[Close]

BLAST of Sed0015452 vs. ExPASy TrEMBL
Match: A0A1S3BAM4 (uncharacterized protein LOC103487607 OS=Cucumis melo OX=3656 GN=LOC103487607 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.9e-36
Identity = 92/150 (61.33%), Postives = 107/150 (71.33%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHH 60
           MD DEFYR+PAAVPFKWEIKPGVP+NH R  Q P HSP  H   H+Q+LKPPPAV+HF H
Sbjct: 1   MDTDEFYRKPAAVPFKWEIKPGVPRNHHRPRQSPTHSPPQH---HRQKLKPPPAVSHFPH 60

Query: 61  PSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLPSRKSSKSANRT-PEPDYSSE 120
           PSNSLHSS RTRSDRW F RS +    + S GCFP S LP+RKS K+ +R  PEPDYSS+
Sbjct: 61  PSNSLHSSPRTRSDRWRFVRSEQ----VSSSGCFP-SPLPNRKSPKALSRKFPEPDYSSD 120

Query: 121 SETLSRWS----GIILSFYFSLLTRMPLRF 146
            +TLSRWS      I  F +S+ +  P  F
Sbjct: 121 LDTLSRWSVSSRKSISPFRYSVSSSSPSSF 142

[Close]

BLAST of Sed0015452 vs. ExPASy TrEMBL
Match: A0A0A0KY52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361790 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 2.1e-34
Identity = 89/141 (63.12%), Postives = 102/141 (72.34%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHH 60
           MD DEFYRQPAAVPFKWEIKPGVP+NH RL   P HSP  H   H+Q+LKPPPAV+HF H
Sbjct: 1   MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQH---HRQKLKPPPAVSHFPH 60

Query: 61  PSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLPSRKSSKSANR-TPEPDYSSE 120
           P NSLHSS RT+S+RW F RS +    + S GCFP S LP+RKS KS +R  PEPDYSS+
Sbjct: 61  PPNSLHSSPRTQSERWRFVRSEQ----VSSSGCFP-SPLPNRKSPKSVSRKLPEPDYSSD 120

Query: 121 SETLSRWSGIILSFYFSLLTR 141
            +TLSR  G   +  F LL R
Sbjct: 121 LDTLSR-CGFEETVGFKLLCR 132

[Close]

BLAST of Sed0015452 vs. ExPASy TrEMBL
Match: A0A6J1ISY3 (uncharacterized protein LOC111480325 OS=Cucurbita maxima OX=3661 GN=LOC111480325 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 8.0e-34
Identity = 86/129 (66.67%), Postives = 95/129 (73.64%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAV--THF 60
           MDVDEFYRQPAAVPFKWEIKPGVP+NH  L  FP HSPQ H     ++LKPPPAV  T F
Sbjct: 1   MDVDEFYRQPAAVPFKWEIKPGVPRNHHCLHPFPTHSPQQH-----KKLKPPPAVTATQF 60

Query: 61  HHPSNSLHSSSRTRSDRWPFSRSNRREPDLVSVGCFPSSSLPSRKSSKSANRTPEPDYSS 120
           H  SNSL    RTRSDRW  S+S   EP+ VSVGCF SS LP+RK++K  NR PEPD +S
Sbjct: 61  HRSSNSL----RTRSDRWSSSQSKLAEPEQVSVGCF-SSPLPNRKATKILNRKPEPDCAS 119

Query: 121 ESETLSRWS 128
           E ETL RWS
Sbjct: 121 ELETLPRWS 119

[Close]

BLAST of Sed0015452 vs. ExPASy TrEMBL
Match: A0A6J1BQH3 (uncharacterized protein DKFZp434B061-like OS=Momordica charantia OX=3673 GN=LOC111004696 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 4.0e-33
Identity = 86/133 (64.66%), Postives = 96/133 (72.18%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPPPHKQRLKPPPAVTHFHH 60
           MD DEFYR+PAAVPFKWEIKPGVP+ H RL       P   PPP  Q+LKPPP V+HF  
Sbjct: 1   MDADEFYRRPAAVPFKWEIKPGVPRAHHRL------CPSPSPPP--QKLKPPPVVSHFRR 60

Query: 61  PSN----SLHSSSRTRSDRWPFSRSNRREPDLVS--VGCFPSSSLPSRKSSKSANRTPEP 120
           PS     SLHSSSRTRSDRW F+RS+  EP  VS   GCFPS S P+RKS KS NR PEP
Sbjct: 61  PSESSSCSLHSSSRTRSDRWRFARSSLAEPPQVSPATGCFPSPS-PNRKSGKSMNRKPEP 120

Query: 121 DYSSESETLSRWS 128
           +Y++E ETLSRWS
Sbjct: 121 NYTTELETLSRWS 124

[Close]

BLAST of Sed0015452 vs. TAIR 10
Match: AT1G77400.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G21695.1); Has 328 Blast hits to 314 proteins in 61 species: Archae - 0; Bacteria - 12; Metazoa - 130; Fungi - 28; Plants - 92; Viruses - 10; Other Eukaryotes - 56 (source: NCBI BLink). )

HSP 1 Score: 63.5 bits (153), Expect = 1.6e-10
Identity = 56/193 (29.02%), Postives = 79/193 (40.93%), Query Frame = 0


Query: 1   MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPGHSPQLHPP----------------- 60
           +DVD+ +++P  +PF WEI+PGVPK   R+ Q PG++  L PP                 
Sbjct: 4   IDVDDSFKRPGTIPFSWEIRPGVPKT--RMSQ-PGNTTPLQPPKKLSPLRFKPLSHSQPL 63

Query: 61  -------------------------PHK-----QRLKP---PPAVTHFHHPSNSLHSSSR 120
                                    PH       +LKP   P +++ F+ P  S  SS R
Sbjct: 64  LPPALSPPSSSFISNSKSRPLSPLTPHSFSTTPSKLKPPRTPSSLSGFYSPGPSFRSSPR 123

Query: 121 TRSDRWPFSRSNRREPD----------LVSVGCFPSSSLPSRK------SSKSANRTPEP 128
             S+RW   R NR  P+          +   GCFPS     RK        KS +R+   
Sbjct: 124 AFSERWQLHRPNRIRPESEPEPSSDFSVAGFGCFPSPKFRLRKVKSGGSRRKSGSRSEND 183

[Close]

BLAST of Sed0015452 vs. TAIR 10
Match: AT1G21695.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 47.0 bits (110), Expect = 1.6e-05
Identity = 32/79 (40.51%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 1  MDVDEFYRQPAAVPFKWEIKPGVPKNHDRLPQFPG-HSPQLHPPPHKQRLKP------PP 60
          +D D+ +++P AVPFKWEI+PGVPK        PG   P L  PP   +L P      PP
Sbjct: 2  VDGDDSFKRPGAVPFKWEIRPGVPKTR------PGDDDPALLQPPPPNKLPPLKLKSTPP 61

Query: 61 AVTHFHHPSNSLHSSSRTR 73
          + +     S+S  S SR+R
Sbjct: 62 SNSPSPSSSSSFFSESRSR 74

The following BLAST results are available for this feature:

BLAST of Sed0015452 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899347.1	4.5e-39	71.65	uncharacterized protein LOC120086669 [Benincasa hispida]	[more]
XP_022940016.1	2.7e-36	68.99	uncharacterized protein LOC111445775 [Cucurbita moschata]	[more]
XP_004142634.1	6.1e-36	67.19	uncharacterized protein LOC101220757 [Cucumis sativus]	[more]
XP_008444194.1	6.1e-36	61.33	PREDICTED: uncharacterized protein LOC103487607 [Cucumis melo]	[more]
KAE8649619.1	6.1e-36	67.19	hypothetical protein Csa_012837 [Cucumis sativus]	[more]

BLAST of Sed0015452 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0015452 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FHC7	1.3e-36	68.99	uncharacterized protein LOC111445775 OS=Cucurbita moschata OX=3662 GN=LOC1114457...	[more]
A0A1S3BAM4	2.9e-36	61.33	uncharacterized protein LOC103487607 OS=Cucumis melo OX=3656 GN=LOC103487607 PE=...	[more]
A0A0A0KY52	2.1e-34	63.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361790 PE=4 SV=1	[more]
A0A6J1ISY3	8.0e-34	66.67	uncharacterized protein LOC111480325 OS=Cucurbita maxima OX=3661 GN=LOC111480325...	[more]
A0A6J1BQH3	4.0e-33	64.66	uncharacterized protein DKFZp434B061-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of Sed0015452 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77400.1	1.6e-10	29.02	CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR0077...	[more]
AT1G21695.1	1.6e-05	40.51	hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007789	Protein of unknown function DUF688	PFAM	PF05097	DUF688	coord: 8..125 e-value: 7.2E-8 score: 32.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..120
None	No IPR available	PANTHER	PTHR35466	SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1	coord: 1..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015452.1	Sed0015452.1	mRNA