Sed0015444 (gene) Chayote v1

Overview


Name	Sed0015444
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription factor SCREAM2-like
Location	LG03: 23061705 .. 23063795 (-)
RNA-Seq Expression	Sed0015444
Synteny	Sed0015444

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGTTTAAGAGCTGGGGGAGAGGAAAAAAAAAGAAAAAGGCAAAAGCTTCTGGTGGCGCGTGGGCAGCGAGTGGAATAATTCGCGGCGGCCGGAAGACGGCGGCGTTTGAATTTATTTTACCGGCGTCTTAGAAATGGATTCAAGAGAAAGAAAGAAAGCGGCAGCTTCTTCAATAAATCATCACAACTCCAAAAAACTTCGTCCATCCACAAGCTCTAGTGCTGTACTTTTCTCATCATTCATTCTATTTAATTCCATTCCTTTAGAGCTCATATATCCACTTTCCTCTTTGAATTTCATGCTTTCATTTAGAGATTTTTAACTCCGTTTTCGAAAATCCACAAAAAAATATTTTAATCAGGTTCGATTTTATAGATTTCAAAGATTATAGATTCGAATCTTAAATCTTAAATCCTAAATGTATTTTGTTCGTGTGTCAAAAAAAATTCATGTACATGTAATGAATATTATACATACCTGATTGATCATTTTCATCTAAACATACTTTATCGTGTTCCCTCTTTCCACATCTTAGTGTAGGGGAGAAAAAAAAGATATATTTTTTTTTTTTTTTTTTTTTTTTTTGGTTCTAAAGAAGCATAAAAAACGGGTGGTAATAAAAAAATGTTTGCCTCTGCCAACAAGAATTTAATTCAACTAGTCTCTAATTTAGAGGTCGATGTGTTTAAATTTTATAGCTCAAAGTAAGAAAAAAAAATCGAACCAATAAACTCTCAATTCCACCCATTTTGTTGACTAAAATTGATTGATAAACTTCTAGGAATCATCAAAGATTCATTGTTGTAAACAAAGGGATATATTTTGTTAGTTTATAAATTATTAGTATGGAATGGAAGTGTCTGAATTGAAATAATATATATTTTCATTTTTTTGAGATGGATTTTTTGAACACGTGCAGGTGGTGAATGTGGAGAGTTTAGAGAAAGGATTTCTAATAAACGTATATTTGGAAAAGAATTCACCCGGATTGCTTGTTAAGATTCTAGAAGTGTTTGCGAATTTGGGACTTGAAGTTCTTGATGCCAACGTGTCTTGTTCCGATTGCTTCGAACTCCAAGCTATCGGGGAAGAGGTTCGATTTTCCTCTCTTTTTTATAATATTACATCCATCCTATGTTAAACCAATGACATGAACATAATACAACGATTGAAATATTTGTTTTCAAATTCACATTGATCGATAAAATATGATGATGTTGGCAGGTTTGAAGTTAATGAATATAAATATATAAATATGCTAAACATCTCTCCTCATAAAGAACGGAGATTTCATAGCGTGAACTATTTCTTTGATCACTAATTGGTCTTGAAATTGATATCTATATTATTTAATATGATATCAAAATATATAGTCTAAATAGGTATTCGATTCAATAAAAATAAAATTTAGATTAAATTCACGATTGATGAGTTCAAAAAAGTCACAATCTTGAAGGGACATGTTAAGATCTCTATCGTAAAGAGTGAAGACCTCATAACATATATAAAAAATATGAACTATTTCACTCATCTCCAATTGATTTTGAAATGGATATTCACATTATTTAATATTCGTTTATATATTGTTATATAAGCTGCTCTATGAGGATAAAAAAAGGAGTCATTTTATTGGAAAAATTATTCTAGCAAGTTAGAAATAAATTTCATAATTCTACCCTAATTTTGCCTATATTTTTTATGCATATCAATAGTATTTTGGTTTCTAACTTTTTTATTTTTTTTATTTTTACAGAATGAAGGCACCAAAATTATAAAGCCCCAAGTGGTGAAAAATGCAGTTAAGCAAGCAATCAAGGAATGGAGTGATAATAATGGGCAGGCATGAAATATTAATACATATTTATTCCTTTTTTCTCTCCATTTTCTTTTCCCCCAAACAGGATATCACTTCTGTGTATAGGGCAACAAATTTTCTACTGCCTTTTTCTTTTAATTCAACAACATTAATGAGAGGTAAATGAATTGAAGTTTATAAGATCTTTAGTTATGAACACACTTATGTCAAGTTAAACTATGACGGTTGTTCAATTTATGAATGTTGTGGATACATGTAGAACATGGAGTCGAG

mRNA sequence

CTTGTTTAAGAGCTGGGGGAGAGGAAAAAAAAAGAAAAAGGCAAAAGCTTCTGGTGGCGCGTGGGCAGCGAGTGGAATAATTCGCGGCGGCCGGAAGACGGCGGCGTTTGAATTTATTTTACCGGCGTCTTAGAAATGGATTCAAGAGAAAGAAAGAAAGCGGCAGCTTCTTCAATAAATCATCACAACTCCAAAAAACTTCGTCCATCCACAAGCTCTAGTGCTGTGGTGAATGTGGAGAGTTTAGAGAAAGGATTTCTAATAAACGTATATTTGGAAAAGAATTCACCCGGATTGCTTGTTAAGATTCTAGAAGTGTTTGCGAATTTGGGACTTGAAGTTCTTGATGCCAACGTGTCTTGTTCCGATTGCTTCGAACTCCAAGCTATCGGGGAAGAGAATGAAGGCACCAAAATTATAAAGCCCCAAGTGGTGAAAAATGCAGTTAAGCAAGCAATCAAGGAATGGAGTGATAATAATGGGCAGGCATGAAATATTAATACATATTTATTCCTTTTTTCTCTCCATTTTCTTTTCCCCCAAACAGGATATCACTTCTGTGTATAGGGCAACAAATTTTCTACTGCCTTTTTCTTTTAATTCAACAACATTAATGAGAGGTAAATGAATTGAAGTTTATAAGATCTTTAGTTATGAACACACTTATGTCAAGTTAAACTATGACGGTTGTTCAATTTATGAATGTTGTGGATACATGTAGAACATGGAGTCGAG

Coding sequence (CDS)

ATGGATTCAAGAGAAAGAAAGAAAGCGGCAGCTTCTTCAATAAATCATCACAACTCCAAAAAACTTCGTCCATCCACAAGCTCTAGTGCTGTGGTGAATGTGGAGAGTTTAGAGAAAGGATTTCTAATAAACGTATATTTGGAAAAGAATTCACCCGGATTGCTTGTTAAGATTCTAGAAGTGTTTGCGAATTTGGGACTTGAAGTTCTTGATGCCAACGTGTCTTGTTCCGATTGCTTCGAACTCCAAGCTATCGGGGAAGAGAATGAAGGCACCAAAATTATAAAGCCCCAAGTGGTGAAAAATGCAGTTAAGCAAGCAATCAAGGAATGGAGTGATAATAATGGGCAGGCATGA

Protein sequence

MDSRERKKAAASSINHHNSKKLRPSTSSSAVVNVESLEKGFLINVYLEKNSPGLLVKILEVFANLGLEVLDANVSCSDCFELQAIGEENEGTKIIKPQVVKNAVKQAIKEWSDNNGQA

Homology

[Close]

BLAST of Sed0015444 vs. NCBI nr
Match: XP_022950375.1 (uncharacterized protein LOC111453491 [Cucurbita moschata])

HSP 1 Score: 189.5 bits (480), Expect = 1.6e-44
Identity = 97/118 (82.20%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 1   MDSRERKKAAASSINHHNSKKLRPSTSSSAVVNVESLEKGFLINVYLEKNSPGLLVKILE 60
           M SRERKKAAASS+NHH SK+ R STSSSAVVNVE+LE+GFLINV+ E+NSPGLLV+ILE
Sbjct: 1   MGSRERKKAAASSLNHHKSKEFRASTSSSAVVNVENLERGFLINVFSERNSPGLLVQILE 60

Query: 61  VFANLGLEVLDANVSCSDCFELQAIGEENEGTKIIKPQVVKNAVKQAIKEWSDNNGQA 119
            F  LGLEVLDA+VSCSDCF+LQA+GEENEGTKIIK QVVKNAVKQAIKEWS++NGQA
Sbjct: 61  AFEKLGLEVLDADVSCSDCFQLQAVGEENEGTKIIKAQVVKNAVKQAIKEWSESNGQA 118

[Close]

BLAST of Sed0015444 vs. NCBI nr
Match: XP_022977370.1 (uncharacterized protein LOC111477723 [Cucurbita maxima])

HSP 1 Score: 189.5 bits (480), Expect = 1.6e-44
Identity = 97/118 (82.20%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 1   MDSRERKKAAASSINHHNSKKLRPSTSSSAVVNVESLEKGFLINVYLEKNSPGLLVKILE 60
           M SRERKKAAASS+NHH SK+ R STSSSAVVNVE LE+GFLINV+ E+NSPGLLV+ILE
Sbjct: 1   MGSRERKKAAASSLNHHKSKEFRASTSSSAVVNVEDLERGFLINVFSERNSPGLLVRILE 60

Query: 61  VFANLGLEVLDANVSCSDCFELQAIGEENEGTKIIKPQVVKNAVKQAIKEWSDNNGQA 119
            F  LGLEVLDA+VSCSDCF+LQA+GEENEGTKIIK QVVKNAVKQAIKEWS++NGQA
Sbjct: 61  AFEKLGLEVLDADVSCSDCFQLQAVGEENEGTKIIKAQVVKNAVKQAIKEWSESNGQA 118

[Close]

BLAST of Sed0015444 vs. NCBI nr
Match: XP_038882922.1 (uncharacterized protein LOC120074022 [Benincasa hispida])

HSP 1 Score: 186.0 bits (471), Expect = 1.8e-43
Identity = 98/118 (83.05%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 1   MDSRERKKAAASSINHHNSKKLRPSTSSSAVVNVESLEKGFLINVYLEKNSPGLLVKILE 60
           M SRERKKAAASS  HH SK+ R STSSSA+VNVESLE+GFLINV+LE+NSPGLLV+ILE
Sbjct: 1   MGSRERKKAAASS--HHKSKEFRASTSSSAMVNVESLERGFLINVFLERNSPGLLVRILE 60

Query: 61  VFANLGLEVLDANVSCSDCFELQAIGEENEGTKIIKPQVVKNAVKQAIKEWSDNNGQA 119
            F  LGLEVLDANVSCSDCF+LQA+GEENEGTKIIK QVVKNAVKQAIKEWS++NGQA
Sbjct: 61  AFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKAQVVKNAVKQAIKEWSESNGQA 116

[Close]

BLAST of Sed0015444 vs. NCBI nr
Match: XP_008464258.1 (PREDICTED: uncharacterized protein LOC103502184 [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 1.1e-40
Identity = 92/119 (77.31%), Postives = 108/119 (90.76%), Query Frame = 0


Query: 1   MDSRERKK-AAASSINHHNSKKLRPSTSSSAVVNVESLEKGFLINVYLEKNSPGLLVKIL 60
           M SRERKK AAA++ +HHNSK+ R STSSSAVVNVES+E+GFLINV+LE+NSPGLLV+IL
Sbjct: 1   MGSRERKKAAAAANSSHHNSKEFRASTSSSAVVNVESVERGFLINVFLERNSPGLLVRIL 60

Query: 61  EVFANLGLEVLDANVSCSDCFELQAIGEENEGTKIIKPQVVKNAVKQAIKEWSDNNGQA 119
           E F  LGL VLDA++SCSDCF+LQA+GEENEG KIIK QVVKNAVKQAIKEWS+++GQA
Sbjct: 61  EAFEKLGLGVLDADISCSDCFQLQAVGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQA 119

[Close]

BLAST of Sed0015444 vs. NCBI nr
Match: KAG6595565.1 (hypothetical protein SDJN03_12118, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 176.4 bits (446), Expect = 1.4e-40
Identity = 94/118 (79.66%), Postives = 103/118 (87.29%), Query Frame = 0


Query: 1   MDSRERKKAAA-SSINHHNSKKLRPSTSSSAVVNVESLEKGFLINVYLEKNSPGLLVKIL 60
           M SRERKKAAA SS+NH    +   STSSSAVVNVESL +GFLINVYLEKNSPGLLV+IL
Sbjct: 63  MGSRERKKAAASSSMNHEKPTEFDASTSSSAVVNVESLVRGFLINVYLEKNSPGLLVRIL 122

Query: 61  EVFANLGLEVLDANVSCSDCFELQAIGEENEGTKIIKPQVVKNAVKQAIKEWSDNNGQ 118
           E F  LGLEVLDANVSCSDCF+LQA+GEENE TKI+KPQVVK AVKQAIKEWS++NGQ
Sbjct: 123 EAFEKLGLEVLDANVSCSDCFQLQAVGEENEDTKIVKPQVVKKAVKQAIKEWSESNGQ 180

[Close]

BLAST of Sed0015444 vs. ExPASy TrEMBL
Match: A0A6J1IM47 (uncharacterized protein LOC111477723 OS=Cucurbita maxima OX=3661 GN=LOC111477723 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 8.0e-45
Identity = 97/118 (82.20%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 1   MDSRERKKAAASSINHHNSKKLRPSTSSSAVVNVESLEKGFLINVYLEKNSPGLLVKILE 60
           M SRERKKAAASS+NHH SK+ R STSSSAVVNVE LE+GFLINV+ E+NSPGLLV+ILE
Sbjct: 1   MGSRERKKAAASSLNHHKSKEFRASTSSSAVVNVEDLERGFLINVFSERNSPGLLVRILE 60

Query: 61  VFANLGLEVLDANVSCSDCFELQAIGEENEGTKIIKPQVVKNAVKQAIKEWSDNNGQA 119
            F  LGLEVLDA+VSCSDCF+LQA+GEENEGTKIIK QVVKNAVKQAIKEWS++NGQA
Sbjct: 61  AFEKLGLEVLDADVSCSDCFQLQAVGEENEGTKIIKAQVVKNAVKQAIKEWSESNGQA 118

[Close]

BLAST of Sed0015444 vs. ExPASy TrEMBL
Match: A0A6J1GFJ5 (uncharacterized protein LOC111453491 OS=Cucurbita moschata OX=3662 GN=LOC111453491 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 8.0e-45
Identity = 97/118 (82.20%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 1   MDSRERKKAAASSINHHNSKKLRPSTSSSAVVNVESLEKGFLINVYLEKNSPGLLVKILE 60
           M SRERKKAAASS+NHH SK+ R STSSSAVVNVE+LE+GFLINV+ E+NSPGLLV+ILE
Sbjct: 1   MGSRERKKAAASSLNHHKSKEFRASTSSSAVVNVENLERGFLINVFSERNSPGLLVQILE 60

Query: 61  VFANLGLEVLDANVSCSDCFELQAIGEENEGTKIIKPQVVKNAVKQAIKEWSDNNGQA 119
            F  LGLEVLDA+VSCSDCF+LQA+GEENEGTKIIK QVVKNAVKQAIKEWS++NGQA
Sbjct: 61  AFEKLGLEVLDADVSCSDCFQLQAVGEENEGTKIIKAQVVKNAVKQAIKEWSESNGQA 118

[Close]

BLAST of Sed0015444 vs. ExPASy TrEMBL
Match: A0A1S3CLI8 (uncharacterized protein LOC103502184 OS=Cucumis melo OX=3656 GN=LOC103502184 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 5.4e-41
Identity = 92/119 (77.31%), Postives = 108/119 (90.76%), Query Frame = 0


Query: 1   MDSRERKK-AAASSINHHNSKKLRPSTSSSAVVNVESLEKGFLINVYLEKNSPGLLVKIL 60
           M SRERKK AAA++ +HHNSK+ R STSSSAVVNVES+E+GFLINV+LE+NSPGLLV+IL
Sbjct: 1   MGSRERKKAAAAANSSHHNSKEFRASTSSSAVVNVESVERGFLINVFLERNSPGLLVRIL 60

Query: 61  EVFANLGLEVLDANVSCSDCFELQAIGEENEGTKIIKPQVVKNAVKQAIKEWSDNNGQA 119
           E F  LGL VLDA++SCSDCF+LQA+GEENEG KIIK QVVKNAVKQAIKEWS+++GQA
Sbjct: 61  EAFEKLGLGVLDADISCSDCFQLQAVGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQA 119

[Close]

BLAST of Sed0015444 vs. ExPASy TrEMBL
Match: A0A6J1HSD7 (uncharacterized protein LOC111466169 OS=Cucurbita maxima OX=3661 GN=LOC111466169 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.5e-40
Identity = 92/118 (77.97%), Postives = 103/118 (87.29%), Query Frame = 0


Query: 1   MDSRERKKAAA-SSINHHNSKKLRPSTSSSAVVNVESLEKGFLINVYLEKNSPGLLVKIL 60
           M SRERKKAAA SS+NH    +   STSSSAVVNVESL +GFLINVY+EKNSPGLLV+IL
Sbjct: 41  MGSRERKKAAASSSMNHEKPTEFDASTSSSAVVNVESLVRGFLINVYVEKNSPGLLVRIL 100

Query: 61  EVFANLGLEVLDANVSCSDCFELQAIGEENEGTKIIKPQVVKNAVKQAIKEWSDNNGQ 118
           E F  LGLEVLDANVSCSDCF+LQA+GEENE TK++KPQVVK AVKQAIKEWS++NGQ
Sbjct: 101 EAFEKLGLEVLDANVSCSDCFQLQAVGEENEDTKMVKPQVVKKAVKQAIKEWSESNGQ 158

[Close]

BLAST of Sed0015444 vs. ExPASy TrEMBL
Match: A0A0A0L039 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G329560 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.5e-40
Identity = 91/119 (76.47%), Postives = 106/119 (89.08%), Query Frame = 0


Query: 1   MDSRERKKAAASSIN--HHNSKKLRPSTSSSAVVNVESLEKGFLINVYLEKNSPGLLVKI 60
           M SRERKKAAA++ N  HHNSK+ R STSS+AVVNVES+E+GFLINV+LE+NSPGLLV+I
Sbjct: 1   MGSRERKKAAAAAPNSSHHNSKEFRASTSSTAVVNVESVERGFLINVFLERNSPGLLVRI 60

Query: 61  LEVFANLGLEVLDANVSCSDCFELQAIGEENEGTKIIKPQVVKNAVKQAIKEWSDNNGQ 118
           LE F  LGL VLDA++SCSDCF+LQA GEENEG KIIK QVVKNAVKQAIKEWS+++GQ
Sbjct: 61  LEAFEKLGLGVLDADISCSDCFQLQAFGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQ 119

[Close]

BLAST of Sed0015444 vs. TAIR 10
Match: AT2G40435.1 (BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.9 bits (224), Expect = 7.4e-19
Identity = 43/92 (46.74%), Postives = 62/92 (67.39%), Query Frame = 0


Query: 24  PSTSSSAVVNVESLEKGFLINVYLEKNSPGLLVKILEVFANLGLEVLDANVSCSDCFELQ 83
           P+   + +V VE+L+KGF+INV+  KN PG+LV +LE F ++GL VL+A  SC+D F L 
Sbjct: 63  PTDPKTPMVTVETLDKGFMINVFSGKNQPGMLVSVLEAFEDIGLNVLEARASCTDSFSLH 122

Query: 84  AIGEENEGTKIIKPQVVKNAVKQAIKEWSDNN 116
           A+G ENE  + +  + VK AV  AI+ W + N
Sbjct: 123 AMGLENEDGENMDAEAVKQAVTDAIRSWGEIN 154

[Close]

BLAST of Sed0015444 vs. TAIR 10
Match: AT3G56220.1 (transcription regulators )

HSP 1 Score: 85.9 bits (211), Expect = 2.4e-17
Identity = 45/99 (45.45%), Postives = 65/99 (65.66%), Query Frame = 0


Query: 18  NSKKLRPSTSSSAVVNVESLEKGFLINVYLEKNSPGLLVKILEVFANLGLEVLDANVSCS 77
           + +  R S+  + +V VE+LEKGF+I V   KN  G+LV +LE F +LGL+V++A VSC+
Sbjct: 57  SEQSFRESSDPNPMVTVETLEKGFMIKVMSRKNEAGMLVCVLETFEDLGLDVVEARVSCT 116

Query: 78  DCFELQAIG-EENEGTKIIKPQVVKNAVKQAIKEWSDNN 116
           D F L AIG   N+    I  + VK AV +AI+ WSD++
Sbjct: 117 DTFSLHAIGSSNNDDGDCIDAEAVKQAVAEAIRTWSDSH 155

The following BLAST results are available for this feature:

BLAST of Sed0015444 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950375.1	1.6e-44	82.20	uncharacterized protein LOC111453491 [Cucurbita moschata]	[more]
XP_022977370.1	1.6e-44	82.20	uncharacterized protein LOC111477723 [Cucurbita maxima]	[more]
XP_038882922.1	1.8e-43	83.05	uncharacterized protein LOC120074022 [Benincasa hispida]	[more]
XP_008464258.1	1.1e-40	77.31	PREDICTED: uncharacterized protein LOC103502184 [Cucumis melo]	[more]
KAG6595565.1	1.4e-40	79.66	hypothetical protein SDJN03_12118, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0015444 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0015444 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IM47	8.0e-45	82.20	uncharacterized protein LOC111477723 OS=Cucurbita maxima OX=3661 GN=LOC111477723...	[more]
A0A6J1GFJ5	8.0e-45	82.20	uncharacterized protein LOC111453491 OS=Cucurbita moschata OX=3662 GN=LOC1114534...	[more]
A0A1S3CLI8	5.4e-41	77.31	uncharacterized protein LOC103502184 OS=Cucumis melo OX=3656 GN=LOC103502184 PE=...	[more]
A0A6J1HSD7	3.5e-40	77.97	uncharacterized protein LOC111466169 OS=Cucurbita maxima OX=3661 GN=LOC111466169...	[more]
A0A0A0L039	3.5e-40	76.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G329560 PE=4 SV=1	[more]

BLAST of Sed0015444 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40435.1	7.4e-19	46.74	BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G5...	[more]
AT3G56220.1	2.4e-17	45.45	transcription regulators	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 30..114
None	No IPR available	PANTHER	PTHR31945:SF45	TRANSCRIPTION FACTOR BHLH FAMILY-RELATED	coord: 30..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015444.1	Sed0015444.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding