
Sed0015398 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GACCTTCACAAAATAAATAGATAAATAAAACCAATACGTAAAAACTTAAAAATATTAGAAAATAAAAATCTAATAAATATGAAATTAGAAGGGCATGAAAATGTAATTAGGAAATGGTCAGCCAGAGGCAACACGTATAAGCCTTGCATGCATTCTCCTTCTCCCACTTGTCTCCATATTCCTCAAATTCCTCACTTTTCTCCCTCCCCATAATTTCGTTAATTACCAAATCACTACTACATTCCTCCTCTCCTCTCCTCTCCTCTCCACCACCGCCATGGCCGACGACCACCGCTCCGCCTCCGCCGCCCTCCTCCGGCGCGTCCGAGACCACTCCCCCCACCTCCTCGGCGTCCTCACCCTCCTCATCTCCGCCTCCATCCTCCTCCTCCTCGCCGGCCTCACCGCCACCGCCGCCCTCCTCCTCACCCCTCTCCTCCTCTTGACCTCCCCCCTGTGGGCCCCCCTAGCCTTCCTCCTCTTCGTCGCCCTCATCTCCTTCGGGGGCCTTGCGGTGGCCGCCGCGGCCGGGGTGTCGTGGGCGTACCGGTACTACAAGGGACTGCACCCGCCTGGATCGGACCGGCTCGAGTACGCGAGGAGCCGGATCGTCGACACGGCGAGTCATGTGAAGGATTATGCTAGGGAGTATGGCGGGTACTTGCAGAGTAAGGTGAAAGATGCTGCTCCTGGTGCTTAATTATATTCTTCATTATTATGTGTTGTTGTCTTTTCTTTTTTTTTTTAATATATATTTTTATATGTATGTGAAGATCTGCATCGGATTCTTGTTCTTCATGTTTTTTTGCCTTTAGAAAAACAGAAATAAAT GACCTTCACAAAATAAATAGATAAATAAAACCAATACGTAAAAACTTAAAAATATTAGAAAATAAAAATCTAATAAATATGAAATTAGAAGGGCATGAAAATGTAATTAGGAAATGGTCAGCCAGAGGCAACACGTATAAGCCTTGCATGCATTCTCCTTCTCCCACTTGTCTCCATATTCCTCAAATTCCTCACTTTTCTCCCTCCCCATAATTTCGTTAATTACCAAATCACTACTACATTCCTCCTCTCCTCTCCTCTCCTCTCCACCACCGCCATGGCCGACGACCACCGCTCCGCCTCCGCCGCCCTCCTCCGGCGCGTCCGAGACCACTCCCCCCACCTCCTCGGCGTCCTCACCCTCCTCATCTCCGCCTCCATCCTCCTCCTCCTCGCCGGCCTCACCGCCACCGCCGCCCTCCTCCTCACCCCTCTCCTCCTCTTGACCTCCCCCCTGTGGGCCCCCCTAGCCTTCCTCCTCTTCGTCGCCCTCATCTCCTTCGGGGGCCTTGCGGTGGCCGCCGCGGCCGGGGTGTCGTGGGCGTACCGGTACTACAAGGGACTGCACCCGCCTGGATCGGACCGGCTCGAGTACGCGAGGAGCCGGATCGTCGACACGGCGAGTCATGTGAAGGATTATGCTAGGGAGTATGGCGGGTACTTGCAGAGTAAGGTGAAAGATGCTGCTCCTGGTGCTTAATTATATTCTTCATTATTATGTGTTGTTGTCTTTTCTTTTTTTTTTTAATATATATTTTTATATGTATGTGAAGATCTGCATCGGATTCTTGTTCTTCATGTTTTTTTGCCTTTAGAAAAACAGAAATAAAT ATGGCCGACGACCACCGCTCCGCCTCCGCCGCCCTCCTCCGGCGCGTCCGAGACCACTCCCCCCACCTCCTCGGCGTCCTCACCCTCCTCATCTCCGCCTCCATCCTCCTCCTCCTCGCCGGCCTCACCGCCACCGCCGCCCTCCTCCTCACCCCTCTCCTCCTCTTGACCTCCCCCCTGTGGGCCCCCCTAGCCTTCCTCCTCTTCGTCGCCCTCATCTCCTTCGGGGGCCTTGCGGTGGCCGCCGCGGCCGGGGTGTCGTGGGCGTACCGGTACTACAAGGGACTGCACCCGCCTGGATCGGACCGGCTCGAGTACGCGAGGAGCCGGATCGTCGACACGGCGAGTCATGTGAAGGATTATGCTAGGGAGTATGGCGGGTACTTGCAGAGTAAGGTGAAAGATGCTGCTCCTGGTGCTTAA MADDHRSASAALLRRVRDHSPHLLGVLTLLISASILLLLAGLTATAALLLTPLLLLTSPLWAPLAFLLFVALISFGGLAVAAAAGVSWAYRYYKGLHPPGSDRLEYARSRIVDTASHVKDYAREYGGYLQSKVKDAAPGA Homology
BLAST of Sed0015398 vs. NCBI nr
Match: XP_008453362.1 (PREDICTED: oleosin 1 [Cucumis melo] >KAA0058047.1 oleosin 1 [Cucumis melo var. makuwa] >TYK28393.1 oleosin 1 [Cucumis melo var. makuwa]) HSP 1 Score: 186.0 bits (471), Expect = 2.2e-43 Identity = 106/150 (70.67%), Postives = 121/150 (80.67%), Query Frame = 0
BLAST of Sed0015398 vs. NCBI nr
Match: XP_004138225.1 (oleosin 1 [Cucumis sativus] >KGN63794.1 hypothetical protein Csa_013989 [Cucumis sativus]) HSP 1 Score: 181.4 bits (459), Expect = 5.3e-42 Identity = 104/150 (69.33%), Postives = 119/150 (79.33%), Query Frame = 0
BLAST of Sed0015398 vs. NCBI nr
Match: XP_038879769.1 (oleosin G-like [Benincasa hispida]) HSP 1 Score: 181.4 bits (459), Expect = 5.3e-42 Identity = 104/150 (69.33%), Postives = 119/150 (79.33%), Query Frame = 0
BLAST of Sed0015398 vs. NCBI nr
Match: XP_022933252.1 (oleosin 1-like [Cucurbita moschata] >XP_023531311.1 oleosin 1-like [Cucurbita pepo subsp. pepo] >KAG6587630.1 Oleosin 16 kDa, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021589.1 Oleosin 16 kDa, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 181.0 bits (458), Expect = 7.0e-42 Identity = 103/147 (70.07%), Postives = 121/147 (82.31%), Query Frame = 0
BLAST of Sed0015398 vs. NCBI nr
Match: XP_023001817.1 (oleosin 1-like [Cucurbita maxima]) HSP 1 Score: 179.1 bits (453), Expect = 2.6e-41 Identity = 102/147 (69.39%), Postives = 120/147 (81.63%), Query Frame = 0
BLAST of Sed0015398 vs. ExPASy Swiss-Prot
Match: A6MGW7 (Oleosin OS=Lilium longiflorum OX=4690 PE=1 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.0e-35 Identity = 91/143 (63.64%), Postives = 106/143 (74.13%), Query Frame = 0
BLAST of Sed0015398 vs. ExPASy Swiss-Prot
Match: A0A1I9R3Y6 (Oleosin OS=Pinus elliottii OX=42064 PE=1 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 2.3e-32 Identity = 79/150 (52.67%), Postives = 108/150 (72.00%), Query Frame = 0
BLAST of Sed0015398 vs. ExPASy Swiss-Prot
Match: A0A060L102 (Oleosin G OS=Pinus massoniana OX=88730 PE=1 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 2.6e-31 Identity = 74/138 (53.62%), Postives = 102/138 (73.91%), Query Frame = 0
BLAST of Sed0015398 vs. ExPASy Swiss-Prot
Match: Q647G3 (Oleosin Ara h 15.0101 OS=Arachis hypogaea OX=3818 PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 3.9e-11 Identity = 51/136 (37.50%), Postives = 75/136 (55.15%), Query Frame = 0
BLAST of Sed0015398 vs. ExPASy Swiss-Prot
Match: Q45W86 (Oleosin Ara h 11.0102 OS=Arachis hypogaea OX=3818 GN=Ahy_A10g047467 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08 Identity = 40/118 (33.90%), Postives = 68/118 (57.63%), Query Frame = 0
BLAST of Sed0015398 vs. ExPASy TrEMBL
Match: A0A5A7UTJ5 (Oleosin 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00210 PE=3 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 1.0e-43 Identity = 106/150 (70.67%), Postives = 121/150 (80.67%), Query Frame = 0
BLAST of Sed0015398 vs. ExPASy TrEMBL
Match: A0A1S3BVH6 (oleosin 1 OS=Cucumis melo OX=3656 GN=LOC103494102 PE=3 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 1.0e-43 Identity = 106/150 (70.67%), Postives = 121/150 (80.67%), Query Frame = 0
BLAST of Sed0015398 vs. ExPASy TrEMBL
Match: A0A0A0LRZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015860 PE=3 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 2.6e-42 Identity = 104/150 (69.33%), Postives = 119/150 (79.33%), Query Frame = 0
BLAST of Sed0015398 vs. ExPASy TrEMBL
Match: A0A6J1EZ90 (oleosin 1-like OS=Cucurbita moschata OX=3662 GN=LOC111440231 PE=3 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 3.4e-42 Identity = 103/147 (70.07%), Postives = 121/147 (82.31%), Query Frame = 0
BLAST of Sed0015398 vs. ExPASy TrEMBL
Match: A0A6J1KHP7 (oleosin 1-like OS=Cucurbita maxima OX=3661 GN=LOC111495847 PE=3 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 1.3e-41 Identity = 102/147 (69.39%), Postives = 120/147 (81.63%), Query Frame = 0
BLAST of Sed0015398 vs. TAIR 10
Match: AT3G18570.1 (Oleosin family protein ) HSP 1 Score: 123.6 bits (309), Expect = 1.2e-28 Identity = 70/141 (49.65%), Postives = 95/141 (67.38%), Query Frame = 0
BLAST of Sed0015398 vs. TAIR 10
Match: AT1G48990.1 (Oleosin family protein ) HSP 1 Score: 114.4 bits (285), Expect = 7.4e-26 Identity = 68/127 (53.54%), Postives = 86/127 (67.72%), Query Frame = 0
BLAST of Sed0015398 vs. TAIR 10
Match: AT2G25890.1 (Oleosin family protein ) HSP 1 Score: 61.6 bits (148), Expect = 5.7e-10 Identity = 46/133 (34.59%), Postives = 74/133 (55.64%), Query Frame = 0
BLAST of Sed0015398 vs. TAIR 10
Match: AT4G25140.1 (oleosin 1 ) HSP 1 Score: 53.1 bits (126), Expect = 2.0e-07 Identity = 40/106 (37.74%), Postives = 57/106 (53.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|